>ref|XM_465282.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1517

 Score =  131 bits (66), Expect = 1e-27
 Identities = 75/78 (96%)
 Strand = Plus / Plus

                                                                       
Query: 183 gaggatgacgacgacctctacggccgcctcaagtcgctgcagcgccacatggagttcgtc 242
           ||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 154 gaggacgacgacgacctctacggccgcctcaagtcgctccagcgccacatggagttcgtc 213

                             
Query: 243 gagatccaggaggagtac 260
           ||||| ||||||||||||
Sbjct: 214 gagatacaggaggagtac 231

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  131 bits (66), Expect = 1e-27
 Identities = 75/78 (96%)
 Strand = Plus / Plus

                                                                            
Query: 183      gaggatgacgacgacctctacggccgcctcaagtcgctgcagcgccacatggagttcgtc 242
                ||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 13058398 gaggacgacgacgacctctacggccgcctcaagtcgctccagcgccacatggagttcgtc 13058457

                                  
Query: 243      gagatccaggaggagtac 260
                ||||| ||||||||||||
Sbjct: 13058458 gagatacaggaggagtac 13058475

>dbj|AP004789.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0476C12
          Length = 157570

 Score =  131 bits (66), Expect = 1e-27
 Identities = 75/78 (96%)
 Strand = Plus / Plus

                                                                         
Query: 183   gaggatgacgacgacctctacggccgcctcaagtcgctgcagcgccacatggagttcgtc 242
             ||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 34975 gaggacgacgacgacctctacggccgcctcaagtcgctccagcgccacatggagttcgtc 35034

                               
Query: 243   gagatccaggaggagtac 260
             ||||| ||||||||||||
Sbjct: 35035 gagatacaggaggagtac 35052

>dbj|AK071476.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023091H23, full
           insert sequence
          Length = 1518

 Score =  131 bits (66), Expect = 1e-27
 Identities = 75/78 (96%)
 Strand = Plus / Plus

                                                                       
Query: 183 gaggatgacgacgacctctacggccgcctcaagtcgctgcagcgccacatggagttcgtc 242
           ||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 154 gaggacgacgacgacctctacggccgcctcaagtcgctccagcgccacatggagttcgtc 213

                             
Query: 243 gagatccaggaggagtac 260
           ||||| ||||||||||||
Sbjct: 214 gagatacaggaggagtac 231

>gb|AY104317.1| Zea mays PCO132144 mRNA sequence
          Length = 1654

 Score = 91.7 bits (46), Expect = 1e-15
 Identities = 61/66 (92%)
 Strand = Plus / Plus

                                                                       
Query: 195 gacctctacggccgcctcaagtcgctgcagcgccacatggagttcgtcgagatccaggag 254
           |||||||| ||||||||||| ||||| || |||||||||||||||||||| |||||||||
Sbjct: 230 gacctctatggccgcctcaaatcgctccaacgccacatggagttcgtcgaaatccaggag 289

                 
Query: 255 gagtac 260
           ||||||
Sbjct: 290 gagtac 295

>gb|AY530962.1| Zea mays 26S proteasome regulatory complex ATPase RPT3 mRNA,
           complete cds
          Length = 1251

 Score = 65.9 bits (33), Expect = 6e-08
 Identities = 42/45 (93%)
 Strand = Plus / Plus

                                                        
Query: 216 tcgctgcagcgccacatggagttcgtcgagatccaggaggagtac 260
           ||||| || |||||||||||||||||||| |||||||||||||||
Sbjct: 1   tcgctccaacgccacatggagttcgtcgaaatccaggaggagtac 45

>dbj|AB070253.1| Oryza sativa (japonica cultivar-group) OsRPT3 mRNA for 26S
           proteasome regulatory particle triple-A ATPase subunit3,
           partial cds
          Length = 1375

 Score = 52.0 bits (26), Expect = 9e-04
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                         
Query: 231 atggagttcgtcgagatccaggaggagtac 260
           ||||||||||||||||| ||||||||||||
Sbjct: 1   atggagttcgtcgagatacaggaggagtac 30

>gb|BT012705.1| Lycopersicon esculentum clone 113583F, mRNA sequence
          Length = 1608

 Score = 42.1 bits (21), Expect = 0.87
 Identities = 54/65 (83%)
 Strand = Plus / Plus

                                                                       
Query: 192 gacgacctctacggccgcctcaagtcgctgcagcgccacatggagttcgtcgagatccag 251
           |||||||||||||  ||||| || || || ||||| ||  |||||||| |||||||||| 
Sbjct: 152 gacgacctctacgctcgcctgaaatctctacagcggcagctggagttcatcgagatccaa 211

                
Query: 252 gagga 256
           |||||
Sbjct: 212 gagga 216

>ref|NM_205476.1| Gallus gallus Na,K-ATPase alpha-2-subunit (LOC396468), mRNA
          Length = 3054

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 58  tcggagccgcagacgcgccccccg 81
           |||||||||||||||||| |||||
Sbjct: 649 tcggagccgcagacgcgctccccg 672

>ref|NM_205475.1| Gallus gallus Na,K-ATPase alpha-3-subunit (LOC396467), mRNA
          Length = 3033

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 58  tcggagccgcagacgcgccccccg 81
           |||||||||||||||||| |||||
Sbjct: 625 tcggagccgcagacgcgctccccg 648

>emb|BX276125.6| Zebrafish DNA sequence from clone CH211-212B14 in linkage group 19,
             complete sequence
          Length = 54430

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 31    ccacaccgctccgctcctct 50
             ||||||||||||||||||||
Sbjct: 45888 ccacaccgctccgctcctct 45907

>gb|M59960.1|CHKNAKAT3 Chicken Na,K-ATPase alpha-3-subunit mRNA, complete cds
          Length = 3033

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 58  tcggagccgcagacgcgccccccg 81
           |||||||||||||||||| |||||
Sbjct: 625 tcggagccgcagacgcgctccccg 648

>gb|M59959.1|CHKNAKAT2 Chicken NA,K-ATPase alpha-2-subunit mRNA, complete cds
          Length = 3054

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 58  tcggagccgcagacgcgccccccg 81
           |||||||||||||||||| |||||
Sbjct: 649 tcggagccgcagacgcgctccccg 672


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 859,197
Number of Sequences: 3902068
Number of extensions: 859197
Number of successful extensions: 16663
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 16639
Number of HSP's gapped (non-prelim): 24
length of query: 264
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 242
effective length of database: 17,147,199,772
effective search space: 4149622344824
effective search space used: 4149622344824
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)