ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart45c04 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_468121.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1404 Score = 137 bits (69), Expect = 5e-29 Identities = 99/109 (90%) Strand = Plus / Plus Query: 156 gggcggcgccgacgtcgacctctacgccgtcctggggctcaagaaggagtgctccgacgc 215 |||||||| || || |||||| |||||||| || |||||||||||||||||||||||||| Sbjct: 246 gggcggcggcggcggcgacctgtacgccgtgctcgggctcaagaaggagtgctccgacgc 305 Query: 216 cgacctcaggctcgcctaccggaggctcgccatgacatggcatccggac 264 |||||||| |||||| ||||||| ||||||||||| ||||||||||||| Sbjct: 306 cgacctcaagctcgcgtaccggaagctcgccatgagatggcatccggac 354 Score = 48.1 bits (24), Expect = 0.033 Identities = 39/44 (88%) Strand = Plus / Plus Query: 433 atgggcgacttcttcggggagatggccgagatgatgagccaggc 476 ||||| |||||| | || ||||||||| |||||||||||||||| Sbjct: 686 atgggggacttcattggtgagatggcccagatgatgagccaggc 729 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 502 ctgcagcagctgttcgtggacatgttcca 530 ||||||||||| ||||| ||||||||||| Sbjct: 761 ctgcagcagctattcgtagacatgttcca 789
>dbj|AK067047.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013092E02, full insert sequence Length = 1403 Score = 137 bits (69), Expect = 5e-29 Identities = 99/109 (90%) Strand = Plus / Plus Query: 156 gggcggcgccgacgtcgacctctacgccgtcctggggctcaagaaggagtgctccgacgc 215 |||||||| || || |||||| |||||||| || |||||||||||||||||||||||||| Sbjct: 245 gggcggcggcggcggcgacctgtacgccgtgctcgggctcaagaaggagtgctccgacgc 304 Query: 216 cgacctcaggctcgcctaccggaggctcgccatgacatggcatccggac 264 |||||||| |||||| ||||||| ||||||||||| ||||||||||||| Sbjct: 305 cgacctcaagctcgcgtaccggaagctcgccatgagatggcatccggac 353 Score = 48.1 bits (24), Expect = 0.033 Identities = 39/44 (88%) Strand = Plus / Plus Query: 433 atgggcgacttcttcggggagatggccgagatgatgagccaggc 476 ||||| |||||| | || ||||||||| |||||||||||||||| Sbjct: 685 atgggggacttcattggtgagatggcccagatgatgagccaggc 728 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 502 ctgcagcagctgttcgtggacatgttcca 530 ||||||||||| ||||| ||||||||||| Sbjct: 760 ctgcagcagctattcgtagacatgttcca 788
>dbj|AK111076.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-175-E11, full insert sequence Length = 828 Score = 125 bits (63), Expect = 2e-25 Identities = 96/107 (89%) Strand = Plus / Plus Query: 287 cggcgcgcgtggaggaggccaaggagcggttccaggagatccagagcgcatactccgtgc 346 ||||| |||| || |||||||||||||| ||||||||||||||| |||| |||||||||| Sbjct: 57 cggcgggcgtcgacgaggccaaggagcgattccaggagatccagggcgcctactccgtgc 116 Query: 347 tctccgacgccggcaagcggctcctctacgacgtcggcgtctacgac 393 |||||||| || |||||| |||||||||||||||||||||||||| Sbjct: 117 tctccgactccaacaagcgcttcctctacgacgtcggcgtctacgac 163 Score = 121 bits (61), Expect = 3e-24 Identities = 103/117 (88%) Strand = Plus / Plus Query: 433 atgggcgacttcttcggggagatggccgagatgatgagccaggccacgccgaccgagagc 492 |||||||| ||| | || |||||||| |||||||||||||||| ||||| | |||||| Sbjct: 209 atgggcgatttccttggcgagatggcgcagatgatgagccaggcgacgcctgcggagagc 268 Query: 493 ttcgaggagctgcagcagctgttcgtggacatgttccaggccgacctcgtcgccggc 549 ||||||||| |||||||||||||||||||||||||||||| |||| ||| ||||||| Sbjct: 269 ttcgaggagttgcagcagctgttcgtggacatgttccaggacgacatcgacgccggc 325
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 115 bits (58), Expect = 2e-22 Identities = 85/94 (90%) Strand = Plus / Minus Query: 156 gggcggcgccgacgtcgacctctacgccgtcctggggctcaagaaggagtgctccgacgc 215 |||||||| || || |||||| |||||||| || |||||||||||||||||||||||||| Sbjct: 33193846 gggcggcggcggcggcgacctgtacgccgtgctcgggctcaagaaggagtgctccgacgc 33193787 Query: 216 cgacctcaggctcgcctaccggaggctcgccatg 249 |||||||| |||||| ||||||| |||||||||| Sbjct: 33193786 cgacctcaagctcgcgtaccggaagctcgccatg 33193753 Score = 48.1 bits (24), Expect = 0.033 Identities = 36/40 (90%) Strand = Plus / Minus Query: 296 tggaggaggccaaggagcggttccaggagatccagagcgc 335 ||||||| ||||||||| |||||||||||||||| |||| Sbjct: 33191927 tggaggaagccaaggagaagttccaggagatccagggcgc 33191888 Score = 48.1 bits (24), Expect = 0.033 Identities = 39/44 (88%) Strand = Plus / Minus Query: 433 atgggcgacttcttcggggagatggccgagatgatgagccaggc 476 ||||| |||||| | || ||||||||| |||||||||||||||| Sbjct: 33191553 atgggggacttcattggtgagatggcccagatgatgagccaggc 33191510 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 502 ctgcagcagctgttcgtggacatgttcca 530 ||||||||||| ||||| ||||||||||| Sbjct: 33190684 ctgcagcagctattcgtagacatgttcca 33190656
>dbj|AP004849.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1311_D08 Length = 163702 Score = 115 bits (58), Expect = 2e-22 Identities = 85/94 (90%) Strand = Plus / Minus Query: 156 gggcggcgccgacgtcgacctctacgccgtcctggggctcaagaaggagtgctccgacgc 215 |||||||| || || |||||| |||||||| || |||||||||||||||||||||||||| Sbjct: 23155 gggcggcggcggcggcgacctgtacgccgtgctcgggctcaagaaggagtgctccgacgc 23096 Query: 216 cgacctcaggctcgcctaccggaggctcgccatg 249 |||||||| |||||| ||||||| |||||||||| Sbjct: 23095 cgacctcaagctcgcgtaccggaagctcgccatg 23062 Score = 48.1 bits (24), Expect = 0.033 Identities = 36/40 (90%) Strand = Plus / Minus Query: 296 tggaggaggccaaggagcggttccaggagatccagagcgc 335 ||||||| ||||||||| |||||||||||||||| |||| Sbjct: 21236 tggaggaagccaaggagaagttccaggagatccagggcgc 21197 Score = 48.1 bits (24), Expect = 0.033 Identities = 39/44 (88%) Strand = Plus / Minus Query: 433 atgggcgacttcttcggggagatggccgagatgatgagccaggc 476 ||||| |||||| | || ||||||||| |||||||||||||||| Sbjct: 20862 atgggggacttcattggtgagatggcccagatgatgagccaggc 20819 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 502 ctgcagcagctgttcgtggacatgttcca 530 ||||||||||| ||||| ||||||||||| Sbjct: 19993 ctgcagcagctattcgtagacatgttcca 19965
>dbj|AK109297.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-188-D06, full insert sequence Length = 550 Score = 115 bits (58), Expect = 2e-22 Identities = 85/94 (90%) Strand = Plus / Plus Query: 156 gggcggcgccgacgtcgacctctacgccgtcctggggctcaagaaggagtgctccgacgc 215 |||||||| || || |||||| |||||||| || |||||||||||||||||||||||||| Sbjct: 75 gggcggcggcggcggcgacctgtacgccgtgctcgggctcaagaaggagtgctccgacgc 134 Query: 216 cgacctcaggctcgcctaccggaggctcgccatg 249 |||||||| |||||| ||||||| |||||||||| Sbjct: 135 cgacctcaagctcgcgtaccggaagctcgccatg 168
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 97.6 bits (49), Expect = 4e-17 Identities = 82/93 (88%) Strand = Plus / Plus Query: 157 ggcggcgccgacgtcgacctctacgccgtcctggggctcaagaaggagtgctccgacgcc 216 |||||||| |||| |||||| ||||||||||| || |||| | ||||||| |||||||| Sbjct: 4878808 ggcggcgcggacgccgacctgtacgccgtcctcggcctcagcagggagtgcaccgacgcc 4878867 Query: 217 gacctcaggctcgcctaccggaggctcgccatg 249 |||||||||||||||||||| | |||||||||| Sbjct: 4878868 gacctcaggctcgcctaccgcaagctcgccatg 4878900 Score = 93.7 bits (47), Expect = 6e-16 Identities = 59/63 (93%) Strand = Plus / Plus Query: 487 gagagcttcgaggagctgcagcagctgttcgtggacatgttccaggccgacctcgtcgcc 546 ||||||||||||||| |||||||||||||||||||||||||||||| |||| ||| |||| Sbjct: 4879589 gagagcttcgaggagttgcagcagctgttcgtggacatgttccaggacgacatcgacgcc 4879648 Query: 547 ggc 549 ||| Sbjct: 4879649 ggc 4879651 Score = 65.9 bits (33), Expect = 1e-07 Identities = 51/57 (89%) Strand = Plus / Plus Query: 287 cggcgcgcgtggaggaggccaaggagcggttccaggagatccagagcgcatactccg 343 ||||| |||| || |||||||||||||| ||||||||||||||| |||| ||||||| Sbjct: 4879062 cggcgggcgtcgacgaggccaaggagcgattccaggagatccagggcgcctactccg 4879118 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 343 gtgctctccgacgccggcaagcggctcctctacgacgtcggcgtctacgac 393 |||||||||||| || |||||| |||||||||||||||||||||||||| Sbjct: 4879255 gtgctctccgactccaacaagcgcttcctctacgacgtcggcgtctacgac 4879305 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 433 atgggcgacttcttcggggagatggccgagatgatgagccaggccacgcc 482 |||||||| ||| |||| |||||||| |||||||||||||||| ||||| Sbjct: 4879443 atgggcgatttcctcggcgagatggcgcagatgatgagccaggcgacgcc 4879492
>dbj|AP003510.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0528E04 Length = 170701 Score = 97.6 bits (49), Expect = 4e-17 Identities = 82/93 (88%) Strand = Plus / Plus Query: 157 ggcggcgccgacgtcgacctctacgccgtcctggggctcaagaaggagtgctccgacgcc 216 |||||||| |||| |||||| ||||||||||| || |||| | ||||||| |||||||| Sbjct: 66291 ggcggcgcggacgccgacctgtacgccgtcctcggcctcagcagggagtgcaccgacgcc 66350 Query: 217 gacctcaggctcgcctaccggaggctcgccatg 249 |||||||||||||||||||| | |||||||||| Sbjct: 66351 gacctcaggctcgcctaccgcaagctcgccatg 66383 Score = 93.7 bits (47), Expect = 6e-16 Identities = 59/63 (93%) Strand = Plus / Plus Query: 487 gagagcttcgaggagctgcagcagctgttcgtggacatgttccaggccgacctcgtcgcc 546 ||||||||||||||| |||||||||||||||||||||||||||||| |||| ||| |||| Sbjct: 67072 gagagcttcgaggagttgcagcagctgttcgtggacatgttccaggacgacatcgacgcc 67131 Query: 547 ggc 549 ||| Sbjct: 67132 ggc 67134 Score = 65.9 bits (33), Expect = 1e-07 Identities = 51/57 (89%) Strand = Plus / Plus Query: 287 cggcgcgcgtggaggaggccaaggagcggttccaggagatccagagcgcatactccg 343 ||||| |||| || |||||||||||||| ||||||||||||||| |||| ||||||| Sbjct: 66545 cggcgggcgtcgacgaggccaaggagcgattccaggagatccagggcgcctactccg 66601 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 343 gtgctctccgacgccggcaagcggctcctctacgacgtcggcgtctacgac 393 |||||||||||| || |||||| |||||||||||||||||||||||||| Sbjct: 66738 gtgctctccgactccaacaagcgcttcctctacgacgtcggcgtctacgac 66788 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 433 atgggcgacttcttcggggagatggccgagatgatgagccaggccacgcc 482 |||||||| ||| |||| |||||||| |||||||||||||||| ||||| Sbjct: 66926 atgggcgatttcctcggcgagatggcgcagatgatgagccaggcgacgcc 66975
>dbj|AK104186.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-E10, full insert sequence Length = 1041 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 228 cgcctaccggaggctcgccatgacatggcatccggaccggtgc 270 ||||||||||||||||||||||| ||||| |||||||||||| Sbjct: 280 cgcctaccggaggctcgccatgaagtggcacccggaccggtgc 322
>dbj|AK069897.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023038C19, full insert sequence Length = 954 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 228 cgcctaccggaggctcgccatgacatggcatccggaccggtgc 270 ||||||||||||||||||||||| ||||| |||||||||||| Sbjct: 278 cgcctaccggaggctcgccatgaagtggcacccggaccggtgc 320
>dbj|AK066250.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013056D15, full insert sequence Length = 1103 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 228 cgcctaccggaggctcgccatgacatggcatccggaccggtgc 270 ||||||||||||||||||||||| ||||| |||||||||||| Sbjct: 315 cgcctaccggaggctcgccatgaagtggcacccggaccggtgc 357
>dbj|AK059801.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-F12, full insert sequence Length = 1007 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 228 cgcctaccggaggctcgccatgacatggcatccggaccggtgc 270 ||||||||||||||||||||||| ||||| |||||||||||| Sbjct: 236 cgcctaccggaggctcgccatgaagtggcacccggaccggtgc 278
>gb|AY107865.1| Zea mays PCO073209 mRNA sequence Length = 974 Score = 61.9 bits (31), Expect = 2e-06 Identities = 90/110 (81%), Gaps = 6/110 (5%) Strand = Plus / Plus Query: 433 atgggcgacttcttcggggagatggccgagatgatgagccaggccacgccgac------c 486 ||||| |||||| |||| ||||||||| |||||||||||||||| |||||| Sbjct: 170 atgggggacttcatcggtgagatggcccagatgatgagccaggcgcagccgacgaggcaa 229 Query: 487 gagagcttcgaggagctgcagcagctgttcgtggacatgttccaggccga 536 || ||||| ||||||||||||||||| || ||||||||||| ||| |||| Sbjct: 230 gaaagctttgaggagctgcagcagctttttgtggacatgtttcagtccga 279
>gb|AY112724.1| Bifidobacterium longum strain RW048 plasmid pNAC1, complete sequence Length = 3538 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 438 cgacttcttcggggagatggccgaga 463 |||||||||||||||||||||||||| Sbjct: 2432 cgacttcttcggggagatggccgaga 2457
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 154 ctgggcggcgccgacgtcgacc 175 |||||||||||||||||||||| Sbjct: 894426 ctgggcggcgccgacgtcgacc 894405
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 228 cgcctaccggaggctcgccatg 249 |||||||||||||||||||||| Sbjct: 10544941 cgcctaccggaggctcgccatg 10544920
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 271 tcggcgtccggcagctcggcgc 292 |||||||||||||||||||||| Sbjct: 653700 tcggcgtccggcagctcggcgc 653679
>emb|BX842574.1| Mycobacterium tuberculosis H37Rv complete genome; segment 3/13 Length = 349564 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 154 ctgggcggcgccgacgtcgacc 175 |||||||||||||||||||||| Sbjct: 210244 ctgggcggcgccgacgtcgacc 210223
>emb|BX640443.1| Bordetella bronchiseptica strain RB50, complete genome; segment 7/16 Length = 346274 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 534 cgacctcgtcgccggcgggttcggcg 559 |||||| ||||||||||||||||||| Sbjct: 339390 cgacctggtcgccggcgggttcggcg 339415
>emb|BX640429.1| Bordetella parapertussis strain 12822, complete genome; segment 7/14 Length = 344321 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 534 cgacctcgtcgccggcgggttcggcg 559 |||||| ||||||||||||||||||| Sbjct: 98777 cgacctggtcgccggcgggttcggcg 98802
>emb|BX640414.1| Bordetella pertussis strain Tohama I, complete genome; segment 4/12 Length = 343243 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 534 cgacctcgtcgccggcgggttcggcg 559 |||||| ||||||||||||||||||| Sbjct: 114597 cgacctggtcgccggcgggttcggcg 114622
>emb|BX248336.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 3/14 Length = 320050 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 154 ctgggcggcgccgacgtcgacc 175 |||||||||||||||||||||| Sbjct: 228347 ctgggcggcgccgacgtcgacc 228326
>gb|AC118668.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0036G02, from chromosome 3, complete sequence Length = 153308 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 228 cgcctaccggaggctcgccatg 249 |||||||||||||||||||||| Sbjct: 100754 cgcctaccggaggctcgccatg 100733
>gb|AE006022.1| Caulobacter crescentus CB15 section 348 of 359 of the complete genome Length = 10637 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 265 cggtgctcggcgtccggcagctcggc 290 |||||||||||||||||| ||||||| Sbjct: 6968 cggtgctcggcgtccggcggctcggc 6993
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 44.1 bits (22), Expect = 0.52 Identities = 49/58 (84%) Strand = Plus / Plus Query: 343 gtgctctccgacgccggcaagcggctcctctacgacgtcggcgtctacgacagcgacg 400 ||||||||||| || |||| || ||||||| |||||||| | |||||||||||||| Sbjct: 22152906 gtgctctccgatcccaacaagaggatcctctatgacgtcggagcctacgacagcgacg 22152963
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 228 cgcctaccggaggctcgccatg 249 |||||||||||||||||||||| Sbjct: 10543042 cgcctaccggaggctcgccatg 10543021
>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome Length = 3304561 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 296 tggaggaggccaaggagcggttccag 321 |||||||||||||||||| ||||||| Sbjct: 537514 tggaggaggccaaggagcagttccag 537539
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 498 ggagctgcagcagctgttcgtg 519 |||||||||||||||||||||| Sbjct: 1251784 ggagctgcagcagctgttcgtg 1251805 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 362 agcggctcctctacgacgtcggcg 385 |||||||||||| ||||||||||| Sbjct: 3153315 agcggctcctctccgacgtcggcg 3153338
>dbj|AP003871.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1117_F10 Length = 169948 Score = 44.1 bits (22), Expect = 0.52 Identities = 49/58 (84%) Strand = Plus / Plus Query: 343 gtgctctccgacgccggcaagcggctcctctacgacgtcggcgtctacgacagcgacg 400 ||||||||||| || |||| || ||||||| |||||||| | |||||||||||||| Sbjct: 115869 gtgctctccgatcccaacaagaggatcctctatgacgtcggagcctacgacagcgacg 115926
>dbj|AK069153.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023007J18, full insert sequence Length = 1816 Score = 44.1 bits (22), Expect = 0.52 Identities = 49/58 (84%) Strand = Plus / Plus Query: 343 gtgctctccgacgccggcaagcggctcctctacgacgtcggcgtctacgacagcgacg 400 ||||||||||| || |||| || ||||||| |||||||| | |||||||||||||| Sbjct: 540 gtgctctccgatcccaacaagaggatcctctatgacgtcggagcctacgacagcgacg 597
>gb|AY106283.1| Zea mays PCO121378 mRNA sequence Length = 910 Score = 44.1 bits (22), Expect = 0.52 Identities = 34/38 (89%) Strand = Plus / Plus Query: 232 taccggaggctcgccatgacatggcatccggaccggtg 269 |||||||||||||| |||| ||||| ||||||||||| Sbjct: 299 taccggaggctcgcgatgaagtggcacccggaccggtg 336
>gb|CP000144.1| Rhodobacter sphaeroides 2.4.1 chromosome 2, complete genome Length = 943016 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 532 gccgacctcgtcgccggcgggttcg 556 |||| |||||||||||||||||||| Sbjct: 58117 gccgccctcgtcgccggcgggttcg 58141
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 405 ccgccgcgacgagcaggatgtgtccggca 433 |||||| |||||||||||||||| ||||| Sbjct: 636726 ccgccgtgacgagcaggatgtgttcggca 636754
>gb|BC078017.1| Xenopus laevis GDP dissociation inhibitor 2, mRNA (cDNA clone MGC:82555 IMAGE:4968535), complete cds Length = 2235 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 314 ggttccaggagatccagagcg 334 ||||||||||||||||||||| Sbjct: 1197 ggttccaggagatccagagcg 1177
>ref|XM_656317.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN3805.2), mRNA Length = 906 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 109 ggaggcggcggtaccggcgcc 129 ||||||||||||||||||||| Sbjct: 153 ggaggcggcggtaccggcgcc 133
>gb|AY316747.1| Rhizobium sp. NGR234 megaplasmid 2 contig 1, complete sequence Length = 357655 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 532 gccgacctcgtcgccggcggg 552 ||||||||||||||||||||| Sbjct: 32839 gccgacctcgtcgccggcggg 32819
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 270 ctcggcgtccggcagctcggcgcgcgtgg 298 |||||| ||| |||||||||||||||||| Sbjct: 2566911 ctcggcttccagcagctcggcgcgcgtgg 2566939
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 532 gccgacctcgtcgccggcgggttcg 556 |||||||||||||||||| |||||| Sbjct: 1648680 gccgacctcgtcgccggctggttcg 1648656
>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome Length = 3561584 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 265 cggtgctcggcgtccggcagctcggcgcg 293 ||||||||||| || |||||||||||||| Sbjct: 310275 cggtgctcggcctcgggcagctcggcgcg 310303
>dbj|AK168367.1| Mus musculus 17 days embryo kidney cDNA, RIKEN full-length enriched library, clone:I920001A19 product:Hypothetical cellular retinaldehyde-binding protein homolog [Mus musculus], full insert sequence Length = 4532 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 301 gaggccaaggagcggttccaggagatccagagc 333 |||||| |||||||| |||||||||||||||| Sbjct: 3227 gaggcccaggagcggcaccaggagatccagagc 3259
>dbj|AK052605.1| Mus musculus 0 day neonate kidney cDNA, RIKEN full-length enriched library, clone:D630003M21 product:hypothetical Cellular retinaldehyde-binding protein (CRAL)/Triple function domain (TRIO) containing protein, full insert sequence Length = 3914 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 301 gaggccaaggagcggttccaggagatccagagc 333 |||||| |||||||| |||||||||||||||| Sbjct: 3219 gaggcccaggagcggcaccaggagatccagagc 3251
>gb|AF164342.1|AF164342 Aspergillus nidulans histone deacetylase HosA (hosA) gene, complete cds Length = 2398 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 109 ggaggcggcggtaccggcgcc 129 ||||||||||||||||||||| Sbjct: 239 ggaggcggcggtaccggcgcc 259
>gb|DQ008443.1| Sinorhizobium fredii strain USDA 257 Y4xP gene, complete cds; and Y4xO gene, partial cds Length = 1839 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 532 gccgacctcgtcgccggcggg 552 ||||||||||||||||||||| Sbjct: 792 gccgacctcgtcgccggcggg 772
>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome Length = 1849742 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 574 ggccaccgggtccaggccccg 594 ||||||||||||||||||||| Sbjct: 1701865 ggccaccgggtccaggccccg 1701885 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 294 cgtggaggaggccaaggagcggttc 318 |||||||||||| |||||||||||| Sbjct: 1270350 cgtggaggaggcgaaggagcggttc 1270374 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 ggcgccatggccgaccaccg 143 |||||||||||||||||||| Sbjct: 1652917 ggcgccatggccgaccaccg 1652898
>gb|AE005023.1| Halobacterium sp. NRC-1 section 54 of 170 of the complete genome Length = 11020 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 373 tacgacgtcggcgtctacgac 393 ||||||||||||||||||||| Sbjct: 3210 tacgacgtcggcgtctacgac 3230
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 258 tccggaccggtgctcggcgtc 278 ||||||||||||||||||||| Sbjct: 2332813 tccggaccggtgctcggcgtc 2332833
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Minus Query: 315 gttccaggagatccagagcgcatactccgtgctctccgacg 355 |||| |||||||||||| ||||||||||| ||||| |||| Sbjct: 625227 gttcaaggagatccagaaggcatactccgttctctcggacg 625187
>gb|AE017221.1| Thermus thermophilus HB27, complete genome Length = 1894877 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 294 cgtggaggaggccaaggagcggttc 318 |||||||||||| |||||||||||| Sbjct: 947528 cgtggaggaggcgaaggagcggttc 947552 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 ggcgccatggccgaccaccg 143 |||||||||||||||||||| Sbjct: 1331863 ggcgccatggccgaccaccg 1331844
>ref|NM_177657.2| Mus musculus RIKEN cDNA D630003M21 gene (D630003M21Rik), mRNA Length = 3914 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 301 gaggccaaggagcggttccaggagatccagagc 333 |||||| |||||||| |||||||||||||||| Sbjct: 3219 gaggcccaggagcggcaccaggagatccagagc 3251
>gb|U03058.1|TTU03058 Thermus thermophilus RecA protein (recA) gene, complete cds Length = 1085 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 574 ggccaccgggtccaggccccg 594 ||||||||||||||||||||| Sbjct: 863 ggccaccgggtccaggccccg 843
>emb|AL663063.14| Mouse DNA sequence from clone RP23-407H16 on chromosome 2, complete sequence Length = 211815 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Minus Query: 301 gaggccaaggagcggttccaggagatccagagc 333 |||||| |||||||| |||||||||||||||| Sbjct: 48782 gaggcccaggagcggcaccaggagatccagagc 48750
>gb|M94725.1|RCAFIXG Rhodobacter sphaeroides 52 kDa (R.meliloti FixG homolog) and 48 kDa (N-terminus resembles GntR famiy regulators) genes, complete cds Length = 3483 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 532 gccgacctcgtcgccggcgggttcg 556 |||| |||||||||||||||||||| Sbjct: 2201 gccgccctcgtcgccggcgggttcg 2177
>dbj|D17392.1|TTHREAP Thermus thermophilus gene for RecA protein, complete cds Length = 1281 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 574 ggccaccgggtccaggccccg 594 ||||||||||||||||||||| Sbjct: 1008 ggccaccgggtccaggccccg 988
>gb|AE010371.1| Methanopyrus kandleri AV19 section 70 of 157 of the complete genome Length = 14192 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 114 cggcggtaccggcgccatgg 133 |||||||||||||||||||| Sbjct: 6414 cggcggtaccggcgccatgg 6433
>gb|AC160245.2| Culex pipiens quinquefasciatus, clone Culex pipiens quinquefasciatus-3940136D9, complete sequence Length = 121820 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 254 ggcatccggaccggtgctcggcgt 277 |||| ||||||||||||||||||| Sbjct: 19835 ggcagccggaccggtgctcggcgt 19812
>gb|AC108875.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1123_C08, complete sequence Length = 132017 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 227 tcgcctaccggaggctcgcc 246 |||||||||||||||||||| Sbjct: 3359 tcgcctaccggaggctcgcc 3378
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 404 accgccgcgacgagcaggat 423 |||||||||||||||||||| Sbjct: 1621007 accgccgcgacgagcaggat 1620988
>gb|AC130607.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0017D10, complete sequence Length = 149870 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 227 tcgcctaccggaggctcgcc 246 |||||||||||||||||||| Sbjct: 113023 tcgcctaccggaggctcgcc 113042
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 404 accgccgcgacgagcaggat 423 |||||||||||||||||||| Sbjct: 2867701 accgccgcgacgagcaggat 2867682
>gb|AE009056.1| Agrobacterium tumefaciens str. C58 circular chromosome, section 82 of 256 of the complete sequence Length = 10229 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 542 tcgccggcgggttcggcggtgcgc 565 |||||||||||||| ||||||||| Sbjct: 6376 tcgccggcgggttctgcggtgcgc 6353
>emb|AL645924.13| Human DNA sequence from clone RP11-503N18 on chromosome 4, complete sequence Length = 168683 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 46 ccgcgcctccggccagctgc 65 |||||||||||||||||||| Sbjct: 48005 ccgcgcctccggccagctgc 47986
>gb|CP000272.1| Burkholderia xenovorans LB400 chromosome 3, complete sequence Length = 1471779 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 539 tcgtcgccggcgggttcggcggtg 562 |||||||||||| ||||||||||| Sbjct: 104241 tcgtcgccggcgagttcggcggtg 104264
>ref|XM_788354.1| PREDICTED: Strongylocentrotus purpuratus similar to DnaJ (Hsp40) homolog, subfamily C, member 3 (LOC588683), mRNA Length = 2022 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 240 gctcgccatgacatggcatccgga 263 ||||||||||| |||||||||||| Sbjct: 1764 gctcgccatgatatggcatccgga 1787
>emb|AL357314.11| Human DNA sequence from clone RP4-682C21 on chromosome 1p31.1-31.3 Contains the ACADM gene for acyl-Coenzyme A dehydrogenase, C-4 to C-12 straight chain, a dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex) (DLTS) pseudogene, the RABGGTB gene for Rab geranylgeranyltransferase, beta subunit and the 5' end of the MSH4 gene for mutS homolog 4 (E. coli), complete sequence Length = 111566 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 312 gcggttccaggagatccaga 331 |||||||||||||||||||| Sbjct: 72036 gcggttccaggagatccaga 72017
>gb|BT009340.1| Triticum aestivum clone wlm4.pk0016.a11:fis, full insert mRNA sequence Length = 2022 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 526 ttccaggccgacctcgtcgccggc 549 |||||||||||||||| ||||||| Sbjct: 108 ttccaggccgacctcgccgccggc 131
>emb|BX572606.1| Rhodopseudomonas palustris CGA009 complete genome; segment 14/16 Length = 349841 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 526 ttccaggccgacctcgtcgc 545 |||||||||||||||||||| Sbjct: 296381 ttccaggccgacctcgtcgc 296362
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 404 accgccgcgacgagcaggat 423 |||||||||||||||||||| Sbjct: 2597861 accgccgcgacgagcaggat 2597842
>emb|AL939111.1|SCO939111 Streptomyces coelicolor A3(2) complete genome; segment 8/29 Length = 321250 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 270 ctcggcgtccggcagctcggcgcg 293 |||||||||||||||| ||||||| Sbjct: 61097 ctcggcgtccggcagcgcggcgcg 61120
>emb|AL929087.4| Zebrafish DNA sequence from clone CH211-226M16 in linkage group 23 Contains three novel genes and a CpG island, complete sequence Length = 205160 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 cctgcgccaccttaccagca 29 |||||||||||||||||||| Sbjct: 51144 cctgcgccaccttaccagca 51125
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 152 aactgggcggcgccgacgtc 171 |||||||||||||||||||| Sbjct: 727131 aactgggcggcgccgacgtc 727112
>gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome Length = 2841581 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 542 tcgccggcgggttcggcggtgcgc 565 |||||||||||||| ||||||||| Sbjct: 901854 tcgccggcgggttctgcggtgcgc 901831
>ref|XM_684414.1| PREDICTED: Danio rerio hypothetical protein LOC561014 (LOC561014), mRNA Length = 858 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 cctgcgccaccttaccagca 29 |||||||||||||||||||| Sbjct: 550 cctgcgccaccttaccagca 569
>ref|XM_684063.1| PREDICTED: Danio rerio hypothetical protein LOC560665 (LOC560665), mRNA Length = 858 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 cctgcgccaccttaccagca 29 |||||||||||||||||||| Sbjct: 550 cctgcgccaccttaccagca 569
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 123 cggcgccatggccgaccacc 142 |||||||||||||||||||| Sbjct: 22849237 cggcgccatggccgaccacc 22849218
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 227 tcgcctaccggaggctcgcc 246 |||||||||||||||||||| Sbjct: 20114698 tcgcctaccggaggctcgcc 20114717
>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome Length = 3147090 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 543 cgccggcgggttcggcggtg 562 |||||||||||||||||||| Sbjct: 855312 cgccggcgggttcggcggtg 855293
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 270 ctcggcgtccggcagctcgg 289 |||||||||||||||||||| Sbjct: 3341704 ctcggcgtccggcagctcgg 3341723
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 539 tcgtcgccggcgggttcggcggtg 562 |||| ||||||||||||||||||| Sbjct: 1118315 tcgtggccggcgggttcggcggtg 1118338
>gb|AE005084.1| Halobacterium sp. NRC-1 section 115 of 170 of the complete genome Length = 11691 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 539 tcgtcgccggcgggttcggc 558 |||||||||||||||||||| Sbjct: 3595 tcgtcgccggcgggttcggc 3576
>dbj|AK110157.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-161-E11, full insert sequence Length = 3647 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 275 cgtccggcagctcggcgcgc 294 |||||||||||||||||||| Sbjct: 3108 cgtccggcagctcggcgcgc 3089
>ref|XM_311006.2| Anopheles gambiae str. PEST ENSANGP00000008130 (ENSANGG00000006134), partial mRNA Length = 3261 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 547 ggcgggttcggcggtgcgcc 566 |||||||||||||||||||| Sbjct: 296 ggcgggttcggcggtgcgcc 277
>dbj|AK106297.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-101-C01, full insert sequence Length = 1641 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 227 tcgcctaccggaggctcgcc 246 |||||||||||||||||||| Sbjct: 157 tcgcctaccggaggctcgcc 176
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 ccggcaacggcaactgggcg 160 |||||||||||||||||||| Sbjct: 3643522 ccggcaacggcaactgggcg 3643541
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 539 tcgtcgccggcgggttcggcggtg 562 ||||||||||||| |||||||||| Sbjct: 3973021 tcgtcgccggcggcttcggcggtg 3973044
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 123 cggcgccatggccgaccacc 142 |||||||||||||||||||| Sbjct: 22777428 cggcgccatggccgaccacc 22777409
>emb|AL935070.3|CNS08CCM Oryza sativa chromosome 12, . BAC OSJNBa0040P10 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 148705 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 123 cggcgccatggccgaccacc 142 |||||||||||||||||||| Sbjct: 107607 cggcgccatggccgaccacc 107626
>emb|Z68284.1|HSL95E6 Human DNA sequence from clone LA04NC01-95E6 on chromosome 4, complete sequence Length = 37695 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 46 ccgcgcctccggccagctgc 65 |||||||||||||||||||| Sbjct: 22969 ccgcgcctccggccagctgc 22950
>emb|AJ249388.1|MSE249388 Manduca sexta mRNA for vacuolar ATPase subunit C (mvC gene) Length = 1826 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 530 aggccgacctcgtcgccggc 549 |||||||||||||||||||| Sbjct: 826 aggccgacctcgtcgccggc 845
>dbj|AB035547.1| Streptomyces virginiae genes for VarM, BarZ, Orf2, complete cds Length = 3729 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 296 tggaggaggccaaggagcgg 315 |||||||||||||||||||| Sbjct: 2953 tggaggaggccaaggagcgg 2972 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,627,090 Number of Sequences: 3902068 Number of extensions: 3627090 Number of successful extensions: 86372 Number of sequences better than 10.0: 89 Number of HSP's better than 10.0 without gapping: 89 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 81321 Number of HSP's gapped (non-prelim): 5051 length of query: 598 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 575 effective length of database: 17,143,297,704 effective search space: 9857396179800 effective search space used: 9857396179800 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
