>PQQE_METCA (Q608P0) Coenzyme PQQ synthesis protein E (Pyrroloquinoline quinone|
           biosynthesis protein E)
          Length = 373

 Score = 27.7 bits (60), Expect = 9.1
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = +1

Query: 1   PDHHRLLATLARHGRLAAAATLFSTAVRTTRAL 99
           P HHR+L  +A   R A+   LF    R +RAL
Sbjct: 339 PHHHRVLEAIASTQRSASDKPLFFRNARNSRAL 371

>MIAA_MYCTU (P65352) tRNA delta(2)-isopentenylpyrophosphate transferase (EC|
           2.5.1.8) (IPP transferase) (Isopentenyl-diphosphate:tRNA
           isopentenyltransferase) (IPTase) (IPPT)
          Length = 314

 Score = 27.7 bits (60), Expect = 9.1
 Identities = 17/32 (53%), Positives = 19/32 (59%)
 Frame = +1

Query: 13  RLLATLARHGRLAAAATLFSTAVRTTRALNTI 108
           RL A LAR    AAAA L + A RT RAL  +
Sbjct: 138 RLHAELARRDPAAAAAILPTDARRTVRALEVV 169

>MIAA_MYCBO (P65353) tRNA delta(2)-isopentenylpyrophosphate transferase (EC|
           2.5.1.8) (IPP transferase) (Isopentenyl-diphosphate:tRNA
           isopentenyltransferase) (IPTase) (IPPT)
          Length = 314

 Score = 27.7 bits (60), Expect = 9.1
 Identities = 17/32 (53%), Positives = 19/32 (59%)
 Frame = +1

Query: 13  RLLATLARHGRLAAAATLFSTAVRTTRALNTI 108
           RL A LAR    AAAA L + A RT RAL  +
Sbjct: 138 RLHAELARRDPAAAAAILPTDARRTVRALEVV 169


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,613,765
Number of Sequences: 219361
Number of extensions: 49502
Number of successful extensions: 255
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 253
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 255
length of database: 80,573,946
effective HSP length: 24
effective length of database: 75,309,282
effective search space used: 1807422768
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)