ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart45b10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AF288738.1| Homo sapiens epidermal growth factor receptor (EG... 42 0.46
2ref|XM_882097.1| PREDICTED: Bos taurus hypothetical protein LOC6... 42 0.46
3gb|AY588246.1| Homo sapiens epidermal growth factor receptor (er... 42 0.46
4gb|AC146013.2| Pan troglodytes BAC clone RP43-128F23 from 7, com... 42 0.46
5gb|AC006977.3|AC006977 Homo sapiens PAC clone RP5-1091E12 from 7... 42 0.46
6gb|U95089.1|HSU95089 Human truncated epidermal growth factor rec... 42 0.46
7gb|M23390.1|HUMEGFRP Homo sapiens epidermal growth factor recept... 42 0.46
8gb|M38425.1|HUMEGFR Human EGF receptor (EGFR) gene, 5' end 42 0.46
9emb|X06370.1|HSEGFR1 Human A431 EGF receptor gene 5'-flank and e... 42 0.46
10emb|X17054.1|HSEGFREC H.sapiens epidermal growth factor receptor... 42 0.46
11gb|DQ249137.1|DQ249135S03 Sus scrofa plasma platelet-activating ... 42 0.46
12gb|AC151789.1| Ornithorhynchus anatinus chromosome UNK clone OAB... 40 1.8
13gb|AC151765.1| Ornithorhynchus anatinus chromosome UNK clone OAB... 40 1.8
14gb|AC114342.12| Mus musculus chromosome 5, clone RP24-143H14, co... 40 1.8
15ref|XM_751168.1| Ustilago maydis 521 hypothetical protein (UM001... 40 1.8
16gb|AC163089.3| Mus musculus chromosome 5, clone RP23-346P15, com... 40 1.8
17gb|AC090647.6| Genomic sequence for Mus musculus, clone RP23-252... 40 1.8
18gb|AC024619.16| Homo sapiens chromosome 17, clone RP11-321A17, c... 40 1.8
19ref|NM_118268.1| Arabidopsis thaliana carbohydrate transporter/ ... 38 7.1
20gb|AC139867.4| Mus musculus BAC clone RP23-430P22 from chromosom... 38 7.1
21ref|XM_466513.1| Oryza sativa (japonica cultivar-group), mRNA 38 7.1
22gb|AC107452.10| Mus musculus chromosome 15, clone RP23-236C21, c... 38 7.1
23ref|XM_369169.1| Magnaporthe grisea 70-15 chromosome VI hypothet... 38 7.1
24gb|AC129593.4| Mus musculus BAC clone RP24-142E6 from chromosome... 38 7.1
25ref|XM_959537.1| Neurospora crassa OR74A hypothetical protein (N... 38 7.1
26ref|XM_327728.1| Neurospora crassa OR74A hypothetical protein (N... 38 7.1
27gb|AC147233.3| Mus musculus BAC clone RP23-350J18 from chromosom... 38 7.1
28gb|AC151763.1| Ornithorhynchus anatinus BAC clone OABb-433P24 fr... 38 7.1
29gb|AC105161.10| Mus musculus chromosome 1, clone RP24-73O16, com... 38 7.1
30gb|AC131717.3| Mus musculus chromosome 12 clone RP23-167A18, com... 38 7.1
31gb|AC135081.3| Mus musculus BAC clone RP24-131A24 from chromosom... 38 7.1
32gb|AC130837.4| Mus musculus BAC clone RP24-157P23 from chromosom... 38 7.1
33gb|AC126277.3| Mus musculus BAC clone RP23-161L22 from 12, compl... 38 7.1
34gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome 38 7.1
35gb|AC154683.2| Mus musculus BAC clone RP23-142O4 from chromosome... 38 7.1
36emb|AL161555.2|ATCHRIV55 Arabidopsis thaliana DNA chromosome 4, ... 38 7.1
37emb|AL022603.1|ATF18E5 Arabidopsis thaliana DNA chromosome 4, BA... 38 7.1
38gb|AC103758.14| Homo sapiens chromosome 8, clone CTD-3135A9, com... 38 7.1
39emb|BX571668.20| Zebrafish DNA sequence from clone DKEY-47M8 in ... 38 7.1
40gb|AC079874.21| Oryza sativa chromosome 10 BAC OSJNBa0042H09 gen... 38 7.1
41gb|AC139671.10| Mus musculus chromosome 15, clone RP23-230O9, co... 38 7.1
42dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 38 7.1
43dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 38 7.1
44dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 38 7.1
45dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 38 7.1
46gb|AC175465.1| Ornithorhynchus anatinus BAC clone OABb-36D11 fro... 38 7.1
47gb|AC160764.2| Ornithorhynchus anatinus BAC clone OABb-454A1 fro... 38 7.1
48dbj|AP004023.3| Oryza sativa (japonica cultivar-group) genomic D... 38 7.1
49dbj|AP004079.2| Oryza sativa (japonica cultivar-group) genomic D... 38 7.1
50emb|BX569780.6| Zebrafish DNA sequence from clone CH211-134A17 i... 38 7.1
51dbj|AP005457.3| Oryza sativa (japonica cultivar-group) genomic D... 38 7.1
52dbj|AP004744.2| Oryza sativa (japonica cultivar-group) genomic D... 38 7.1
53dbj|AP003573.3| Oryza sativa (japonica cultivar-group) genomic D... 38 7.1
54dbj|AP003571.4| Oryza sativa (japonica cultivar-group) genomic D... 38 7.1
55dbj|AP005568.3| Oryza sativa (japonica cultivar-group) genomic D... 38 7.1
56dbj|AP005420.3| Oryza sativa (japonica cultivar-group) genomic D... 38 7.1
57emb|AJ344333.1|ATH344333 Arabidopsis thaliana mRNA for STP12 pro... 38 7.1
58dbj|AK070091.1| Oryza sativa (japonica cultivar-group) cDNA clon... 38 7.1
59gb|AC144798.4| Mus musculus BAC clone RP24-364A24 from 14, compl... 38 7.1
60gb|AC156604.2| Laccaria bicolor clone JGIAHZW-9X, complete sequence 38 7.1
61emb|CT573151.3| Platypus DNA sequence from clone CLM1-42M21, com... 38 7.1
62gb|AE001825.1| Deinococcus radiodurans R1 chromosome 2, complete... 38 7.1
63gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 38 7.1 
>gb|AF288738.1| Homo sapiens epidermal growth factor receptor (EGFR) gene, complete
            cds, alternatively spliced; and 5S ribosomal RNA gene,
            complete sequence
          Length = 197496

 Score = 42.1 bits (21), Expect = 0.46
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                         
Query: 117  cctctgctcctccccgtccctcctccgcc 145
            ||||||||||||||  |||||||||||||
Sbjct: 9041 cctctgctcctcccgatccctcctccgcc 9069
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>ref|XM_882097.1| PREDICTED: Bos taurus hypothetical protein LOC616796 (LOC616796),
           mRNA
          Length = 866

 Score = 42.1 bits (21), Expect = 0.46
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 119 tctgctcctccccgtccctcc 139
           |||||||||||||||||||||
Sbjct: 268 tctgctcctccccgtccctcc 248
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>gb|AY588246.1| Homo sapiens epidermal growth factor receptor (erythroblastic
            leukemia viral (v-erb-b) oncogene homolog, avian) (EGFR)
            gene, complete cds
          Length = 192168

 Score = 42.1 bits (21), Expect = 0.46
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                         
Query: 117  cctctgctcctccccgtccctcctccgcc 145
            ||||||||||||||  |||||||||||||
Sbjct: 1756 cctctgctcctcccgatccctcctccgcc 1784
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>gb|AC146013.2| Pan troglodytes BAC clone RP43-128F23 from 7, complete sequence
          Length = 191821

 Score = 42.1 bits (21), Expect = 0.46
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 117    cctctgctcctccccgtccctcctccgcc 145
              ||||||||||||||  |||||||||||||
Sbjct: 187423 cctctgctcctcccgatccctcctccgcc 187395
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>gb|AC006977.3|AC006977 Homo sapiens PAC clone RP5-1091E12 from 7p11.2-p21, complete sequence
          Length = 177998

 Score = 42.1 bits (21), Expect = 0.46
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                         
Query: 117  cctctgctcctccccgtccctcctccgcc 145
            ||||||||||||||  |||||||||||||
Sbjct: 9041 cctctgctcctcccgatccctcctccgcc 9069
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>gb|U95089.1|HSU95089 Human truncated epidermal growth factor receptor-like protein
           precursor mRNA, complete cds
          Length = 1868

 Score = 42.1 bits (21), Expect = 0.46
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 117 cctctgctcctccccgtccctcctccgcc 145
           ||||||||||||||  |||||||||||||
Sbjct: 160 cctctgctcctcccgatccctcctccgcc 188
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>gb|M23390.1|HUMEGFRP Homo sapiens epidermal growth factor receptor (EGFR) gene, promoter
           region
          Length = 159

 Score = 42.1 bits (21), Expect = 0.46
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 117 cctctgctcctccccgtccctcctccgcc 145
           ||||||||||||||  |||||||||||||
Sbjct: 46  cctctgctcctcccgatccctcctccgcc 74
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>gb|M38425.1|HUMEGFR Human EGF receptor (EGFR) gene, 5' end
          Length = 3888

 Score = 42.1 bits (21), Expect = 0.46
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 117 cctctgctcctccccgtccctcctccgcc 145
           ||||||||||||||  |||||||||||||
Sbjct: 774 cctctgctcctcccgatccctcctccgcc 802
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>emb|X06370.1|HSEGFR1 Human A431 EGF receptor gene 5'-flank and exon 1
          Length = 1347

 Score = 42.1 bits (21), Expect = 0.46
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 117 cctctgctcctccccgtccctcctccgcc 145
           ||||||||||||||  |||||||||||||
Sbjct: 762 cctctgctcctcccgatccctcctccgcc 790
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>emb|X17054.1|HSEGFREC H.sapiens epidermal growth factor receptor gene
          Length = 3909

 Score = 42.1 bits (21), Expect = 0.46
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 117 cctctgctcctccccgtccctcctccgcc 145
           ||||||||||||||  |||||||||||||
Sbjct: 775 cctctgctcctcccgatccctcctccgcc 803
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>gb|DQ249137.1|DQ249135S03 Sus scrofa plasma platelet-activating factor-acetylhydrolase
           (PAF-AH) gene, intron 0
          Length = 245

 Score = 42.1 bits (21), Expect = 0.46
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 122 gctcctccccgtccctcctcc 142
           |||||||||||||||||||||
Sbjct: 215 gctcctccccgtccctcctcc 235
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>gb|AC151789.1| Ornithorhynchus anatinus chromosome UNK clone OABb-148A1, complete
              sequence
          Length = 125903

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 113    ccgccctctgctcctccccgtccc 136
              ||||||||||||||||||| ||||
Sbjct: 112132 ccgccctctgctcctccccctccc 112155
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>gb|AC151765.1| Ornithorhynchus anatinus chromosome UNK clone OABb-423A1, complete
             sequence
          Length = 154417

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 113   ccgccctctgctcctccccgtccc 136
             ||||||||||||||||||| ||||
Sbjct: 24796 ccgccctctgctcctccccctccc 24819



 Score = 38.2 bits (19), Expect = 7.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 116   ccctctgctcctccccgtc 134
             |||||||||||||||||||
Sbjct: 25668 ccctctgctcctccccgtc 25650
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>gb|AC114342.12| Mus musculus chromosome 5, clone RP24-143H14, complete sequence
          Length = 171509

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 114   cgccctctgctcctccccgtccct 137
             ||||||||||||||||||| ||||
Sbjct: 75193 cgccctctgctcctccccggccct 75216
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>ref|XM_751168.1| Ustilago maydis 521 hypothetical protein (UM00114.1) partial mRNA
          Length = 1374

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 106 atcctcgccgccctctgctc 125
           ||||||||||||||||||||
Sbjct: 839 atcctcgccgccctctgctc 820
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>gb|AC163089.3| Mus musculus chromosome 5, clone RP23-346P15, complete sequence
          Length = 197826

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 114    cgccctctgctcctccccgtccct 137
              ||||||||||||||||||| ||||
Sbjct: 156828 cgccctctgctcctccccggccct 156851
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>gb|AC090647.6| Genomic sequence for Mus musculus, clone RP23-252I12, complete sequence
          Length = 139891

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 123   ctcctccccgtccctcctcc 142
             ||||||||||||||||||||
Sbjct: 53243 ctcctccccgtccctcctcc 53262
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>gb|AC024619.16| Homo sapiens chromosome 17, clone RP11-321A17, complete sequence
          Length = 198666

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 123    ctcctccccgtccctcctcc 142
              ||||||||||||||||||||
Sbjct: 159465 ctcctccccgtccctcctcc 159446



 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 123    ctcctccccgtccctcctcc 142
              ||||||||||||||||||||
Sbjct: 159452 ctcctccccgtccctcctcc 159433
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>ref|NM_118268.1| Arabidopsis thaliana carbohydrate transporter/ sugar porter
           AT4G21480 mRNA, complete cds
          Length = 1527

 Score = 38.2 bits (19), Expect = 7.1
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 108 cctcgccgccctctgctcctccc 130
           ||||||||| |||||||||||||
Sbjct: 270 cctcgccgcactctgctcctccc 292
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>gb|AC139867.4| Mus musculus BAC clone RP23-430P22 from chromosome 1, complete sequence
          Length = 224730

 Score = 38.2 bits (19), Expect = 7.1
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                         
Query: 116    ccctctgctcctccccgtccctcctcc 142
              |||||| |||||||| |||||||||||
Sbjct: 163766 ccctctcctcctcccagtccctcctcc 163792
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>ref|XM_466513.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 915

 Score = 38.2 bits (19), Expect = 7.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 108 cctcgccgccctctgctcc 126
           |||||||||||||||||||
Sbjct: 24  cctcgccgccctctgctcc 6
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>gb|AC107452.10| Mus musculus chromosome 15, clone RP23-236C21, complete sequence
          Length = 180069

 Score = 38.2 bits (19), Expect = 7.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 124   tcctccccgtccctcctcc 142
             |||||||||||||||||||
Sbjct: 90037 tcctccccgtccctcctcc 90019
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>ref|XM_369169.1| Magnaporthe grisea 70-15 chromosome VI hypothetical protein
           (MG00075.4) partial mRNA
          Length = 1248

 Score = 38.2 bits (19), Expect = 7.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 100 aacaccatcctcgccgccc 118
           |||||||||||||||||||
Sbjct: 610 aacaccatcctcgccgccc 628
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>gb|AC129593.4| Mus musculus BAC clone RP24-142E6 from chromosome 7, complete sequence
          Length = 210291

 Score = 38.2 bits (19), Expect = 7.1
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 116   ccctctgctcctccccgtccctc 138
             |||||||||||||||| ||||||
Sbjct: 80754 ccctctgctcctccccctccctc 80776
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>ref|XM_959537.1| Neurospora crassa OR74A hypothetical protein (NCU07443.1) partial
            mRNA
          Length = 4689

 Score = 38.2 bits (19), Expect = 7.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 82   cgcaccacacgcgcgctca 100
            |||||||||||||||||||
Sbjct: 4286 cgcaccacacgcgcgctca 4304
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>ref|XM_327728.1| Neurospora crassa OR74A hypothetical protein (NCU07443.1) partial
            mRNA
          Length = 4689

 Score = 38.2 bits (19), Expect = 7.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 82   cgcaccacacgcgcgctca 100
            |||||||||||||||||||
Sbjct: 4286 cgcaccacacgcgcgctca 4304
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>gb|AC147233.3| Mus musculus BAC clone RP23-350J18 from chromosome 8, complete sequence
          Length = 185319

 Score = 38.2 bits (19), Expect = 7.1
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                         
Query: 116    ccctctgctcctccccgtccctcctcc 142
              |||||| |||||||| |||||||||||
Sbjct: 123648 ccctcttctcctcccagtccctcctcc 123622
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>gb|AC151763.1| Ornithorhynchus anatinus BAC clone OABb-433P24 from chromosome unknown,
             complete sequence
          Length = 156663

 Score = 38.2 bits (19), Expect = 7.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 116   ccctctgctcctccccgtc 134
             |||||||||||||||||||
Sbjct: 94557 ccctctgctcctccccgtc 94575
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>gb|AC105161.10| Mus musculus chromosome 1, clone RP24-73O16, complete sequence
          Length = 255501

 Score = 38.2 bits (19), Expect = 7.1
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                         
Query: 116    ccctctgctcctccccgtccctcctcc 142
              ||||||||||||||| || ||||||||
Sbjct: 114781 ccctctgctcctcccagttcctcctcc 114755
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>gb|AC131717.3| Mus musculus chromosome 12 clone RP23-167A18, complete sequence
          Length = 190372

 Score = 38.2 bits (19), Expect = 7.1
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 122    gctcctccccgtccctcctccgc 144
              ||||||||||| |||||||||||
Sbjct: 147988 gctcctccccgaccctcctccgc 147966
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>gb|AC135081.3| Mus musculus BAC clone RP24-131A24 from chromosome 7, complete sequence
          Length = 163138

 Score = 38.2 bits (19), Expect = 7.1
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 116   ccctctgctcctccccgtccctc 138
             |||||||||||||||| ||||||
Sbjct: 20471 ccctctgctcctccccctccctc 20449
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>gb|AC130837.4| Mus musculus BAC clone RP24-157P23 from chromosome 8, complete sequence
          Length = 155270

 Score = 38.2 bits (19), Expect = 7.1
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                         
Query: 116    ccctctgctcctccccgtccctcctcc 142
              |||||| |||||||| |||||||||||
Sbjct: 133815 ccctcttctcctcccagtccctcctcc 133841
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>gb|AC126277.3| Mus musculus BAC clone RP23-161L22 from 12, complete sequence
          Length = 191231

 Score = 38.2 bits (19), Expect = 7.1
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 122  gctcctccccgtccctcctccgc 144
            ||||||||||| |||||||||||
Sbjct: 3736 gctcctccccgaccctcctccgc 3714
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>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome
          Length = 4406967

 Score = 38.2 bits (19), Expect = 7.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 95      cgctcaacaccatcctcgc 113
               |||||||||||||||||||
Sbjct: 3230137 cgctcaacaccatcctcgc 3230155
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>gb|AC154683.2| Mus musculus BAC clone RP23-142O4 from chromosome 14, complete sequence
          Length = 219067

 Score = 38.2 bits (19), Expect = 7.1
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 120   ctgctcctccccgtccctcctcc 142
             |||||||||||| ||||||||||
Sbjct: 18533 ctgctcctccccctccctcctcc 18511
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>emb|AL161555.2|ATCHRIV55 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 55
          Length = 194916

 Score = 38.2 bits (19), Expect = 7.1
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 108   cctcgccgccctctgctcctccc 130
             ||||||||| |||||||||||||
Sbjct: 52798 cctcgccgcactctgctcctccc 52776
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>emb|AL022603.1|ATF18E5 Arabidopsis thaliana DNA chromosome 4, BAC clone F18E5 (ESSAII project)
          Length = 95266

 Score = 38.2 bits (19), Expect = 7.1
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 108   cctcgccgccctctgctcctccc 130
             ||||||||| |||||||||||||
Sbjct: 39790 cctcgccgcactctgctcctccc 39768
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>gb|AC103758.14| Homo sapiens chromosome 8, clone CTD-3135A9, complete sequence
          Length = 235357

 Score = 38.2 bits (19), Expect = 7.1
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 120   ctgctcctccccgtccctcctcc 142
             |||||||||||||||||| ||||
Sbjct: 95701 ctgctcctccccgtccctgctcc 95679
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>emb|BX571668.20| Zebrafish DNA sequence from clone DKEY-47M8 in linkage group 10,
             complete sequence
          Length = 242710

 Score = 38.2 bits (19), Expect = 7.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 116   ccctctgctcctccccgtc 134
             |||||||||||||||||||
Sbjct: 86948 ccctctgctcctccccgtc 86930
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>gb|AC079874.21| Oryza sativa chromosome 10 BAC OSJNBa0042H09 genomic sequence, complete
             sequence
          Length = 144191

 Score = 38.2 bits (19), Expect = 7.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 110   tcgccgccctctgctcctc 128
             |||||||||||||||||||
Sbjct: 83009 tcgccgccctctgctcctc 82991
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>gb|AC139671.10| Mus musculus chromosome 15, clone RP23-230O9, complete sequence
          Length = 224181

 Score = 38.2 bits (19), Expect = 7.1
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 116   ccctctgctcctccccgtccctc 138
             |||||||||||||||| ||||||
Sbjct: 70171 ccctctgctcctccccctccctc 70193
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 38.2 bits (19), Expect = 7.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 110      tcgccgccctctgctcctc 128
                |||||||||||||||||||
Sbjct: 21527048 tcgccgccctctgctcctc 21527066
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 38.2 bits (19), Expect = 7.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 108      cctcgccgccctctgctcc 126
                |||||||||||||||||||
Sbjct: 15381524 cctcgccgccctctgctcc 15381542
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 38.2 bits (19), Expect = 7.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 108      cctcgccgccctctgctcc 126
                |||||||||||||||||||
Sbjct: 28447827 cctcgccgccctctgctcc 28447845



 Score = 38.2 bits (19), Expect = 7.1
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                       
Query: 125      cctccccgtccctcctccgcctc 147
                |||||||||||||||||| ||||
Sbjct: 26955868 cctccccgtccctcctccccctc 26955846



 Score = 38.2 bits (19), Expect = 7.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 108      cctcgccgccctctgctcc 126
                |||||||||||||||||||
Sbjct: 25605250 cctcgccgccctctgctcc 25605232
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 38.2 bits (19), Expect = 7.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 108      cctcgccgccctctgctcc 126
                |||||||||||||||||||
Sbjct: 23057671 cctcgccgccctctgctcc 23057689
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>gb|AC175465.1| Ornithorhynchus anatinus BAC clone OABb-36D11 from chromosome unknown,
             complete sequence
          Length = 128273

 Score = 38.2 bits (19), Expect = 7.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 116   ccctctgctcctccccgtc 134
             |||||||||||||||||||
Sbjct: 76723 ccctctgctcctccccgtc 76705
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>gb|AC160764.2| Ornithorhynchus anatinus BAC clone OABb-454A1 from chromosome unknown,
              complete sequence
          Length = 125050

 Score = 38.2 bits (19), Expect = 7.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 113    ccgccctctgctcctcccc 131
              |||||||||||||||||||
Sbjct: 118295 ccgccctctgctcctcccc 118277
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>dbj|AP004023.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1126_D09
          Length = 138615

 Score = 38.2 bits (19), Expect = 7.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 108   cctcgccgccctctgctcc 126
             |||||||||||||||||||
Sbjct: 24709 cctcgccgccctctgctcc 24727
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>dbj|AP004079.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1067_B01
          Length = 100525

 Score = 38.2 bits (19), Expect = 7.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 108   cctcgccgccctctgctcc 126
             |||||||||||||||||||
Sbjct: 82068 cctcgccgccctctgctcc 82086
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>emb|BX569780.6| Zebrafish DNA sequence from clone CH211-134A17 in linkage group 10,
              complete sequence
          Length = 187807

 Score = 38.2 bits (19), Expect = 7.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 116    ccctctgctcctccccgtc 134
              |||||||||||||||||||
Sbjct: 174045 ccctctgctcctccccgtc 174063
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>dbj|AP005457.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0532H03
          Length = 166128

 Score = 38.2 bits (19), Expect = 7.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 108   cctcgccgccctctgctcc 126
             |||||||||||||||||||
Sbjct: 54860 cctcgccgccctctgctcc 54878
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>dbj|AP004744.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBb0065C04
          Length = 165270

 Score = 38.2 bits (19), Expect = 7.1
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 125   cctccccgtccctcctccgcctc 147
             |||||||||||||||||| ||||
Sbjct: 79629 cctccccgtccctcctccccctc 79607
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>dbj|AP003573.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0523F01
          Length = 146419

 Score = 38.2 bits (19), Expect = 7.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 108    cctcgccgccctctgctcc 126
              |||||||||||||||||||
Sbjct: 123567 cctcgccgccctctgctcc 123549
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>dbj|AP003571.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0458E02
          Length = 154458

 Score = 38.2 bits (19), Expect = 7.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 108   cctcgccgccctctgctcc 126
             |||||||||||||||||||
Sbjct: 28695 cctcgccgccctctgctcc 28677
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>dbj|AP005568.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1299_A11
          Length = 160099

 Score = 38.2 bits (19), Expect = 7.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 108   cctcgccgccctctgctcc 126
             |||||||||||||||||||
Sbjct: 30816 cctcgccgccctctgctcc 30834
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>dbj|AP005420.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
              clone:P0418B08
          Length = 165909

 Score = 38.2 bits (19), Expect = 7.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 108    cctcgccgccctctgctcc 126
              |||||||||||||||||||
Sbjct: 160713 cctcgccgccctctgctcc 160731
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>emb|AJ344333.1|ATH344333 Arabidopsis thaliana mRNA for STP12 protein
          Length = 1527

 Score = 38.2 bits (19), Expect = 7.1
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 108 cctcgccgccctctgctcctccc 130
           ||||||||| |||||||||||||
Sbjct: 270 cctcgccgcactctgctcctccc 292
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>dbj|AK070091.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023040K18, full
           insert sequence
          Length = 1003

 Score = 38.2 bits (19), Expect = 7.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 110 tcgccgccctctgctcctc 128
           |||||||||||||||||||
Sbjct: 92  tcgccgccctctgctcctc 110
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>gb|AC144798.4| Mus musculus BAC clone RP24-364A24 from 14, complete sequence
          Length = 159766

 Score = 38.2 bits (19), Expect = 7.1
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 120   ctgctcctccccgtccctcctcc 142
             |||||||||||| ||||||||||
Sbjct: 80904 ctgctcctccccctccctcctcc 80882
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>gb|AC156604.2| Laccaria bicolor clone JGIAHZW-9X, complete sequence
          Length = 38111

 Score = 38.2 bits (19), Expect = 7.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 99    caacaccatcctcgccgcc 117
             |||||||||||||||||||
Sbjct: 11402 caacaccatcctcgccgcc 11384
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>emb|CT573151.3| Platypus DNA sequence from clone CLM1-42M21, complete sequence
          Length = 120606

 Score = 38.2 bits (19), Expect = 7.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 113   ccgccctctgctcctcccc 131
             |||||||||||||||||||
Sbjct: 54872 ccgccctctgctcctcccc 54890
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>gb|AE001825.1| Deinococcus radiodurans R1 chromosome 2, complete sequence
          Length = 412348

 Score = 38.2 bits (19), Expect = 7.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 101    acaccatcctcgccgccct 119
              |||||||||||||||||||
Sbjct: 191828 acaccatcctcgccgccct 191810
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 38.2 bits (19), Expect = 7.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 110      tcgccgccctctgctcctc 128
                |||||||||||||||||||
Sbjct: 21538711 tcgccgccctctgctcctc 21538729


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 606,230
Number of Sequences: 3902068
Number of extensions: 606230
Number of successful extensions: 57558
Number of sequences better than 10.0: 63
Number of HSP's better than 10.0 without gapping: 63
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 57186
Number of HSP's gapped (non-prelim): 372
length of query: 148
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 127
effective length of database: 17,151,101,840
effective search space: 2178189933680
effective search space used: 2178189933680
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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