ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart45b02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1TPT2_BRAOB (P52178) Triose phosphate/phosphate translocator, non... 70 6e-12
2GPT2_ARATH (Q94B38) Glucose-6-phosphate/phosphate translocator 2... 40 0.004
3GPT1_ARATH (Q9M5A9) Glucose-6-phosphate/phosphate translocator 1... 39 0.009
4TPT_SOLTU (P29463) Triose phosphate/phosphate translocator, chlo... 31 3.0
5TPT_FLAPR (P49131) Triose phosphate/phosphate translocator, chlo... 30 6.7
6TPT1_BRAOB (P52177) Triose phosphate/phosphate translocator, chl... 29 8.8

>TPT2_BRAOB (P52178) Triose phosphate/phosphate translocator, non-green|
           plastid, chloroplast precursor (CTPT)
          Length = 402

 Score = 69.7 bits (169), Expect = 6e-12
 Identities = 38/101 (37%), Positives = 49/101 (48%)
 Frame = +1

Query: 283 TPSADEVAAGGGIAGTVQLGAMIVAWYLPNIYFNIYNKXXXXXXXXXXXYTITAFQLAFG 462
           T   +E    G +   ++LG +   WYL NIYFNIYNK            T+T  Q A G
Sbjct: 84  TAVPEEGEGSGKMTKVLELGLLFAMWYLFNIYFNIYNKQVLKALHAPM--TVTLVQFAVG 141

Query: 463 SLVIFFMWAARLHPVPKLSXXXXXXXXXXXXGHMLGTVFTN 585
           S++I FMWA  L+  PK+S             H LG +FTN
Sbjct: 142 SVLITFMWALNLYKRPKISAAQLAAILPLAVVHTLGNLFTN 182



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>GPT2_ARATH (Q94B38) Glucose-6-phosphate/phosphate translocator 2, chloroplast|
           precursor
          Length = 388

 Score = 40.4 bits (93), Expect = 0.004
 Identities = 23/85 (27%), Positives = 34/85 (40%)
 Frame = +1

Query: 322 AGTVQLGAMIVAWYLPNIYFNIYNKXXXXXXXXXXXYTITAFQLAFGSLVIFFMWAARLH 501
           A  +++G     W+  N+ FNIYNK           +  +   LA GSL++   WA R+ 
Sbjct: 92  AQKLKIGIYFATWWALNVVFNIYNK--KVLNAFPYPWLTSTLSLACGSLMMLVSWATRIA 149

Query: 502 PVPKLSXXXXXXXXXXXXGHMLGTV 576
             PK               H +G V
Sbjct: 150 DAPKTDLEFWKTLFPVAVAHTIGHV 174



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>GPT1_ARATH (Q9M5A9) Glucose-6-phosphate/phosphate translocator 1, chloroplast|
           precursor
          Length = 388

 Score = 39.3 bits (90), Expect = 0.009
 Identities = 26/100 (26%), Positives = 38/100 (38%), Gaps = 3/100 (3%)
 Frame = +1

Query: 286 PSADEVAAG---GGIAGTVQLGAMIVAWYLPNIYFNIYNKXXXXXXXXXXXYTITAFQLA 456
           P  D+ AA       A  +++G     W+  N+ FNIYNK           +  +   LA
Sbjct: 77  PIGDDAAAAETKSEAAKKLKIGIYFATWWALNVVFNIYNK--KVLNAYPYPWLTSTLSLA 134

Query: 457 FGSLVIFFMWAARLHPVPKLSXXXXXXXXXXXXGHMLGTV 576
            GSL++   WA  +   PK               H +G V
Sbjct: 135 AGSLMMLISWAVGIVETPKTDFDFWKTLFPVAVAHTIGHV 174



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>TPT_SOLTU (P29463) Triose phosphate/phosphate translocator, chloroplast|
           precursor (cTPT) (E29)
          Length = 414

 Score = 30.8 bits (68), Expect = 3.0
 Identities = 23/99 (23%), Positives = 32/99 (32%)
 Frame = +1

Query: 289 SADEVAAGGGIAGTVQLGAMIVAWYLPNIYFNIYNKXXXXXXXXXXXYTITAFQLAFGSL 468
           S+ +   G     T+  G     WY  N+ FNI NK           Y ++   LA G +
Sbjct: 96  SSGDAKVGFFNKATLTTGFFFFMWYFLNVIFNILNK--KIYNYFPYPYFVSVIHLAVGVV 153

Query: 469 VIFFMWAARLHPVPKLSXXXXXXXXXXXXGHMLGTVFTN 585
                W   L     +              H LG V +N
Sbjct: 154 YCLVSWGVGLPKRAPIDSTQLKLLTPVAFCHALGHVTSN 192



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>TPT_FLAPR (P49131) Triose phosphate/phosphate translocator, chloroplast|
           precursor (cTPT)
          Length = 408

 Score = 29.6 bits (65), Expect = 6.7
 Identities = 22/82 (26%), Positives = 28/82 (34%)
 Frame = +1

Query: 340 GAMIVAWYLPNIYFNIYNKXXXXXXXXXXXYTITAFQLAFGSLVIFFMWAARLHPVPKLS 519
           G     WY  N+ FNI NK           Y ++A  LA G +     WA  L     + 
Sbjct: 107 GFFFFMWYFLNVIFNILNK--KIYNYFPYPYFVSAIHLAVGVVYCLGGWAVGLPKRAPMD 164

Query: 520 XXXXXXXXXXXXGHMLGTVFTN 585
                        H LG V +N
Sbjct: 165 SNLLKLLIPVAFCHALGHVTSN 186



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>TPT1_BRAOB (P52177) Triose phosphate/phosphate translocator, chloroplast|
           precursor (cTPT)
          Length = 407

 Score = 29.3 bits (64), Expect = 8.8
 Identities = 25/113 (22%), Positives = 39/113 (34%), Gaps = 11/113 (9%)
 Frame = +1

Query: 280 LTPSADEVAAGGGIAGTVQLG-----------AMIVAWYLPNIYFNIYNKXXXXXXXXXX 426
           L P     A GG  AG  ++G            +++ WY  N+ FNI NK          
Sbjct: 75  LKPVRAASAEGGDSAGETKVGFLGKYPWLVTGILLLMWYFLNVIFNILNK--KIYNYFPY 132

Query: 427 XYTITAFQLAFGSLVIFFMWAARLHPVPKLSXXXXXXXXXXXXGHMLGTVFTN 585
            Y ++   L  G +     W+  L     ++             H +G V +N
Sbjct: 133 PYFVSVIHLFVGVVYCLVSWSVGLPKRAPVNSDILKVLIPVAVCHAIGHVTSN 185


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 35,813,689
Number of Sequences: 219361
Number of extensions: 417369
Number of successful extensions: 1067
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1054
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1064
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 5101629520
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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