Clone Name | bart45b02 |
---|---|
Clone Library Name | barley_pub |
>TPT2_BRAOB (P52178) Triose phosphate/phosphate translocator, non-green| plastid, chloroplast precursor (CTPT) Length = 402 Score = 69.7 bits (169), Expect = 6e-12 Identities = 38/101 (37%), Positives = 49/101 (48%) Frame = +1 Query: 283 TPSADEVAAGGGIAGTVQLGAMIVAWYLPNIYFNIYNKXXXXXXXXXXXYTITAFQLAFG 462 T +E G + ++LG + WYL NIYFNIYNK T+T Q A G Sbjct: 84 TAVPEEGEGSGKMTKVLELGLLFAMWYLFNIYFNIYNKQVLKALHAPM--TVTLVQFAVG 141 Query: 463 SLVIFFMWAARLHPVPKLSXXXXXXXXXXXXGHMLGTVFTN 585 S++I FMWA L+ PK+S H LG +FTN Sbjct: 142 SVLITFMWALNLYKRPKISAAQLAAILPLAVVHTLGNLFTN 182
>GPT2_ARATH (Q94B38) Glucose-6-phosphate/phosphate translocator 2, chloroplast| precursor Length = 388 Score = 40.4 bits (93), Expect = 0.004 Identities = 23/85 (27%), Positives = 34/85 (40%) Frame = +1 Query: 322 AGTVQLGAMIVAWYLPNIYFNIYNKXXXXXXXXXXXYTITAFQLAFGSLVIFFMWAARLH 501 A +++G W+ N+ FNIYNK + + LA GSL++ WA R+ Sbjct: 92 AQKLKIGIYFATWWALNVVFNIYNK--KVLNAFPYPWLTSTLSLACGSLMMLVSWATRIA 149 Query: 502 PVPKLSXXXXXXXXXXXXGHMLGTV 576 PK H +G V Sbjct: 150 DAPKTDLEFWKTLFPVAVAHTIGHV 174
>GPT1_ARATH (Q9M5A9) Glucose-6-phosphate/phosphate translocator 1, chloroplast| precursor Length = 388 Score = 39.3 bits (90), Expect = 0.009 Identities = 26/100 (26%), Positives = 38/100 (38%), Gaps = 3/100 (3%) Frame = +1 Query: 286 PSADEVAAG---GGIAGTVQLGAMIVAWYLPNIYFNIYNKXXXXXXXXXXXYTITAFQLA 456 P D+ AA A +++G W+ N+ FNIYNK + + LA Sbjct: 77 PIGDDAAAAETKSEAAKKLKIGIYFATWWALNVVFNIYNK--KVLNAYPYPWLTSTLSLA 134 Query: 457 FGSLVIFFMWAARLHPVPKLSXXXXXXXXXXXXGHMLGTV 576 GSL++ WA + PK H +G V Sbjct: 135 AGSLMMLISWAVGIVETPKTDFDFWKTLFPVAVAHTIGHV 174
>TPT_SOLTU (P29463) Triose phosphate/phosphate translocator, chloroplast| precursor (cTPT) (E29) Length = 414 Score = 30.8 bits (68), Expect = 3.0 Identities = 23/99 (23%), Positives = 32/99 (32%) Frame = +1 Query: 289 SADEVAAGGGIAGTVQLGAMIVAWYLPNIYFNIYNKXXXXXXXXXXXYTITAFQLAFGSL 468 S+ + G T+ G WY N+ FNI NK Y ++ LA G + Sbjct: 96 SSGDAKVGFFNKATLTTGFFFFMWYFLNVIFNILNK--KIYNYFPYPYFVSVIHLAVGVV 153 Query: 469 VIFFMWAARLHPVPKLSXXXXXXXXXXXXGHMLGTVFTN 585 W L + H LG V +N Sbjct: 154 YCLVSWGVGLPKRAPIDSTQLKLLTPVAFCHALGHVTSN 192
>TPT_FLAPR (P49131) Triose phosphate/phosphate translocator, chloroplast| precursor (cTPT) Length = 408 Score = 29.6 bits (65), Expect = 6.7 Identities = 22/82 (26%), Positives = 28/82 (34%) Frame = +1 Query: 340 GAMIVAWYLPNIYFNIYNKXXXXXXXXXXXYTITAFQLAFGSLVIFFMWAARLHPVPKLS 519 G WY N+ FNI NK Y ++A LA G + WA L + Sbjct: 107 GFFFFMWYFLNVIFNILNK--KIYNYFPYPYFVSAIHLAVGVVYCLGGWAVGLPKRAPMD 164 Query: 520 XXXXXXXXXXXXGHMLGTVFTN 585 H LG V +N Sbjct: 165 SNLLKLLIPVAFCHALGHVTSN 186
>TPT1_BRAOB (P52177) Triose phosphate/phosphate translocator, chloroplast| precursor (cTPT) Length = 407 Score = 29.3 bits (64), Expect = 8.8 Identities = 25/113 (22%), Positives = 39/113 (34%), Gaps = 11/113 (9%) Frame = +1 Query: 280 LTPSADEVAAGGGIAGTVQLG-----------AMIVAWYLPNIYFNIYNKXXXXXXXXXX 426 L P A GG AG ++G +++ WY N+ FNI NK Sbjct: 75 LKPVRAASAEGGDSAGETKVGFLGKYPWLVTGILLLMWYFLNVIFNILNK--KIYNYFPY 132 Query: 427 XYTITAFQLAFGSLVIFFMWAARLHPVPKLSXXXXXXXXXXXXGHMLGTVFTN 585 Y ++ L G + W+ L ++ H +G V +N Sbjct: 133 PYFVSVIHLFVGVVYCLVSWSVGLPKRAPVNSDILKVLIPVAVCHAIGHVTSN 185 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 35,813,689 Number of Sequences: 219361 Number of extensions: 417369 Number of successful extensions: 1067 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 1054 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1064 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 5101629520 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)