ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart45b02 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_550285.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1652 Score = 250 bits (126), Expect = 4e-63 Identities = 229/261 (87%), Gaps = 8/261 (3%) Strand = Plus / Plus Query: 328 acggtgcagctcggcgccatgatcgtcgcatggtacctccccaacatctacttcaacatc 387 |||| |||||| |||||||||||||| || |||||||||| ||||||||||||||||||| Sbjct: 497 acggcgcagctgggcgccatgatcgtggcgtggtacctcctcaacatctacttcaacatc 556 Query: 388 tacaacaagcaggtcctccaggtgctgccattgccgctcccctacaccatcaccgccttc 447 |||||||||||||| || ||| ||||||||| ||||||||||||||||||||||| Sbjct: 557 tacaacaagcaggtgctgcag------ccattgccgttcccctacaccatcaccgccttc 610 Query: 448 cagctcgccttcggctcgctcgtcatcttcttcatgtgggccgct-aggctccaccccgt 506 |||||||| |||||||| ||||||||||| |||||||||| ||| | ||| || |||| Sbjct: 611 cagctcgcgttcggctccttcgtcatcttcctcatgtgggc-gctcaagcttcatcccgc 669 Query: 507 gcccaagctctccgccgcacagctggccaagatcgcgccgctggccgccgggcacatgct 566 ||||| ||||| ||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 670 gcccagaatctccatttcacagctggccaagatcgcgccgctcgccgccgggcacatgct 729 Query: 567 gggcacggtgttcaccaacat 587 ||||||||||||||||||||| Sbjct: 730 gggcacggtgttcaccaacat 750
>dbj|AK060343.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-008-E01, full insert sequence Length = 1652 Score = 250 bits (126), Expect = 4e-63 Identities = 229/261 (87%), Gaps = 8/261 (3%) Strand = Plus / Plus Query: 328 acggtgcagctcggcgccatgatcgtcgcatggtacctccccaacatctacttcaacatc 387 |||| |||||| |||||||||||||| || |||||||||| ||||||||||||||||||| Sbjct: 497 acggcgcagctgggcgccatgatcgtggcgtggtacctcctcaacatctacttcaacatc 556 Query: 388 tacaacaagcaggtcctccaggtgctgccattgccgctcccctacaccatcaccgccttc 447 |||||||||||||| || ||| ||||||||| ||||||||||||||||||||||| Sbjct: 557 tacaacaagcaggtgctgcag------ccattgccgttcccctacaccatcaccgccttc 610 Query: 448 cagctcgccttcggctcgctcgtcatcttcttcatgtgggccgct-aggctccaccccgt 506 |||||||| |||||||| ||||||||||| |||||||||| ||| | ||| || |||| Sbjct: 611 cagctcgcgttcggctccttcgtcatcttcctcatgtgggc-gctcaagcttcatcccgc 669 Query: 507 gcccaagctctccgccgcacagctggccaagatcgcgccgctggccgccgggcacatgct 566 ||||| ||||| ||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 670 gcccagaatctccatttcacagctggccaagatcgcgccgctcgccgccgggcacatgct 729 Query: 567 gggcacggtgttcaccaacat 587 ||||||||||||||||||||| Sbjct: 730 gggcacggtgttcaccaacat 750
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 115 bits (58), Expect = 2e-22 Identities = 61/62 (98%) Strand = Plus / Plus Query: 526 cagctggccaagatcgcgccgctggccgccgggcacatgctgggcacggtgttcaccaac 585 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 3711083 cagctggccaagatcgcgccgctcgccgccgggcacatgctgggcacggtgttcaccaac 3711142 Query: 586 at 587 || Sbjct: 3711143 at 3711144 Score = 109 bits (55), Expect = 1e-20 Identities = 70/75 (93%) Strand = Plus / Plus Query: 414 gccattgccgctcccctacaccatcaccgccttccagctcgccttcggctcgctcgtcat 473 |||||||||| ||||||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 3710866 gccattgccgttcccctacaccatcaccgccttccagctcgcgttcggctccttcgtcat 3710925 Query: 474 cttcttcatgtgggc 488 |||| |||||||||| Sbjct: 3710926 cttcctcatgtgggc 3710940 Score = 109 bits (55), Expect = 1e-20 Identities = 70/75 (93%) Strand = Plus / Plus Query: 328 acggtgcagctcggcgccatgatcgtcgcatggtacctccccaacatctacttcaacatc 387 |||| |||||| |||||||||||||| || |||||||||| ||||||||||||||||||| Sbjct: 3710708 acggcgcagctgggcgccatgatcgtggcgtggtacctcctcaacatctacttcaacatc 3710767 Query: 388 tacaacaagcaggtc 402 ||||||||||||||| Sbjct: 3710768 tacaacaagcaggtc 3710782 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 55 gcggcctccctcgcctcctcccgc 78 |||| ||||||||||||||||||| Sbjct: 20310717 gcgggctccctcgcctcctcccgc 20310740
>dbj|AP003282.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0583G08 Length = 135295 Score = 115 bits (58), Expect = 2e-22 Identities = 61/62 (98%) Strand = Plus / Plus Query: 526 cagctggccaagatcgcgccgctggccgccgggcacatgctgggcacggtgttcaccaac 585 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 119563 cagctggccaagatcgcgccgctcgccgccgggcacatgctgggcacggtgttcaccaac 119622 Query: 586 at 587 || Sbjct: 119623 at 119624 Score = 109 bits (55), Expect = 1e-20 Identities = 70/75 (93%) Strand = Plus / Plus Query: 414 gccattgccgctcccctacaccatcaccgccttccagctcgccttcggctcgctcgtcat 473 |||||||||| ||||||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 119346 gccattgccgttcccctacaccatcaccgccttccagctcgcgttcggctccttcgtcat 119405 Query: 474 cttcttcatgtgggc 488 |||| |||||||||| Sbjct: 119406 cttcctcatgtgggc 119420 Score = 109 bits (55), Expect = 1e-20 Identities = 70/75 (93%) Strand = Plus / Plus Query: 328 acggtgcagctcggcgccatgatcgtcgcatggtacctccccaacatctacttcaacatc 387 |||| |||||| |||||||||||||| || |||||||||| ||||||||||||||||||| Sbjct: 119188 acggcgcagctgggcgccatgatcgtggcgtggtacctcctcaacatctacttcaacatc 119247 Query: 388 tacaacaagcaggtc 402 ||||||||||||||| Sbjct: 119248 tacaacaagcaggtc 119262
>gb|AC087553.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0685E10, complete sequence Length = 156772 Score = 101 bits (51), Expect = 3e-18 Identities = 69/75 (92%) Strand = Plus / Plus Query: 328 acggtgcagctcggcgccatgatcgtcgcatggtacctccccaacatctacttcaacatc 387 |||||||||||||||||||||||| ||| |||||||||| ||||||||||||||||||| Sbjct: 78063 acggtgcagctcggcgccatgatcctcgtctggtacctcctcaacatctacttcaacatc 78122 Query: 388 tacaacaagcaggtc 402 | |||||||| |||| Sbjct: 78123 ttcaacaagctggtc 78137
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 101 bits (51), Expect = 3e-18 Identities = 69/75 (92%) Strand = Plus / Plus Query: 328 acggtgcagctcggcgccatgatcgtcgcatggtacctccccaacatctacttcaacatc 387 |||||||||||||||||||||||| ||| |||||||||| ||||||||||||||||||| Sbjct: 4191584 acggtgcagctcggcgccatgatcctcgtctggtacctcctcaacatctacttcaacatc 4191643 Query: 388 tacaacaagcaggtc 402 | |||||||| |||| Sbjct: 4191644 ttcaacaagctggtc 4191658
>ref|XM_481795.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1550 Score = 77.8 bits (39), Expect = 4e-11 Identities = 45/47 (95%) Strand = Plus / Plus Query: 358 tggtacctccccaacatctacttcaacatctacaacaagcaggtcct 404 ||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 477 tggtacctcttcaacatctacttcaacatctacaacaagcaggtcct 523
>dbj|AK066618.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013073L11, full insert sequence Length = 1551 Score = 77.8 bits (39), Expect = 4e-11 Identities = 45/47 (95%) Strand = Plus / Plus Query: 358 tggtacctccccaacatctacttcaacatctacaacaagcaggtcct 404 ||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 477 tggtacctcttcaacatctacttcaacatctacaacaagcaggtcct 523
>gb|AY104580.1| Zea mays PCO071161 mRNA sequence Length = 1561 Score = 73.8 bits (37), Expect = 6e-10 Identities = 55/61 (90%) Strand = Plus / Plus Query: 358 tggtacctccccaacatctacttcaacatctacaacaagcaggtcctccaggtgctgcca 417 ||||||||| ||||||||||||||||||||||||||||||||| || |||| |||||| Sbjct: 440 tggtacctcttcaacatctacttcaacatctacaacaagcaggttctgaaggttctgcca 499 Query: 418 t 418 | Sbjct: 500 t 500
>gb|U66404.1|ZMU66404 Zea mays plastid phosphate/phosphoenolpyruvate translocator precursor (MZPPT4) mRNA, complete cds Length = 1459 Score = 73.8 bits (37), Expect = 6e-10 Identities = 55/61 (90%) Strand = Plus / Plus Query: 358 tggtacctccccaacatctacttcaacatctacaacaagcaggtcctccaggtgctgcca 417 ||||||||| ||||||||||||||||||||||||||||||||| || |||| |||||| Sbjct: 332 tggtacctcttcaacatctacttcaacatctacaacaagcaggttctgaaggttctgcca 391 Query: 418 t 418 | Sbjct: 392 t 392
>gb|AF372833.1|AF372833 Oryza sativa phosphoenolpyruvate/phosphate translocator mRNA, complete cds Length = 1588 Score = 71.9 bits (36), Expect = 2e-09 Identities = 42/44 (95%) Strand = Plus / Plus Query: 358 tggtacctccccaacatctacttcaacatctacaacaagcaggt 401 ||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 389 tggtacctcttcaacatctacttcaacatctacaacaagcaggt 432
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 71.9 bits (36), Expect = 2e-09 Identities = 42/44 (95%) Strand = Plus / Minus Query: 358 tggtacctccccaacatctacttcaacatctacaacaagcaggt 401 ||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 7171015 tggtacctcttcaacatctacttcaacatctacaacaagcaggt 7170972
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 71.9 bits (36), Expect = 2e-09 Identities = 42/44 (95%) Strand = Plus / Plus Query: 358 tggtacctccccaacatctacttcaacatctacaacaagcaggt 401 ||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 15585491 tggtacctcttcaacatctacttcaacatctacaacaagcaggt 15585534 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 261 ggcggctgctgcggcggagct 281 ||||||||||||||||||||| Sbjct: 24506297 ggcggctgctgcggcggagct 24506317 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 258 ggcggcggctgctgcggcgg 277 |||||||||||||||||||| Sbjct: 23945112 ggcggcggctgctgcggcgg 23945093 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 257 aggcggcggctgctgcggcggagc 280 ||||||||||||| |||||||||| Sbjct: 10633091 aggcggcggctgcggcggcggagc 10633068 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 542 cgccgctggccgccgggcac 561 |||||||||||||||||||| Sbjct: 6049725 cgccgctggccgccgggcac 6049744
>dbj|AP004011.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1381_H04 Length = 130961 Score = 71.9 bits (36), Expect = 2e-09 Identities = 42/44 (95%) Strand = Plus / Minus Query: 358 tggtacctccccaacatctacttcaacatctacaacaagcaggt 401 ||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 23120 tggtacctcttcaacatctacttcaacatctacaacaagcaggt 23077
>dbj|AP004756.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0592C05 Length = 150478 Score = 71.9 bits (36), Expect = 2e-09 Identities = 42/44 (95%) Strand = Plus / Minus Query: 358 tggtacctccccaacatctacttcaacatctacaacaagcaggt 401 ||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 123094 tggtacctcttcaacatctacttcaacatctacaacaagcaggt 123051
>dbj|AP004645.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1119_B10 Length = 148508 Score = 71.9 bits (36), Expect = 2e-09 Identities = 42/44 (95%) Strand = Plus / Plus Query: 358 tggtacctccccaacatctacttcaacatctacaacaagcaggt 401 ||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 133249 tggtacctcttcaacatctacttcaacatctacaacaagcaggt 133292
>dbj|AP004459.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0410E11 Length = 150200 Score = 71.9 bits (36), Expect = 2e-09 Identities = 42/44 (95%) Strand = Plus / Plus Query: 358 tggtacctccccaacatctacttcaacatctacaacaagcaggt 401 ||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 19646 tggtacctcttcaacatctacttcaacatctacaacaagcaggt 19689
>dbj|AK071036.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023080P10, full insert sequence Length = 1672 Score = 71.9 bits (36), Expect = 2e-09 Identities = 42/44 (95%) Strand = Plus / Plus Query: 358 tggtacctccccaacatctacttcaacatctacaacaagcaggt 401 ||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 456 tggtacctcttcaacatctacttcaacatctacaacaagcaggt 499
>gb|U66403.1|ZMU66403 Zea mays plastid phosphate/phosphoenolpyruvate translocator precursor (MZPPT1) mRNA, complete cds Length = 1452 Score = 71.9 bits (36), Expect = 2e-09 Identities = 42/44 (95%) Strand = Plus / Plus Query: 358 tggtacctccccaacatctacttcaacatctacaacaagcaggt 401 ||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 396 tggtacctcttcaacatctacttcaacatctacaacaagcaggt 439
>gb|AY942815.1| Glycine max putative plastid phosphoenolpyruvate/phosphate translocator mRNA, partial cds; nuclear gene for plastid product Length = 810 Score = 63.9 bits (32), Expect = 6e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 358 tggtacctccccaacatctacttcaacatctacaacaagcaggt 401 ||||||||| ||||||||||||||||||||||||||| ||||| Sbjct: 270 tggtacctcttcaacatctacttcaacatctacaacaaacaggt 313
>gb|U13632.1|BOU13632 Brassica oleracea var. botrytis non-green plastid phosphate/triose-phosphate translocator TPT precursor (BONGTPT) mRNA, complete cds Length = 1403 Score = 58.0 bits (29), Expect = 3e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 373 atctacttcaacatctacaacaagcaggt 401 ||||||||||||||||||||||||||||| Sbjct: 353 atctacttcaacatctacaacaagcaggt 381
>gb|AC169374.2| Sorghum bicolor clone SB_BBc0019I06, complete sequence Length = 129695 Score = 54.0 bits (27), Expect = 5e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 479 tcatgtgggccgctaggctccaccccgtgcccaagctctccgc 521 ||||||||||| | ||||||||||| ||||||| ||||||||| Sbjct: 15265 tcatgtgggccaccaggctccacccggtgcccaggctctccgc 15223
>gb|AY103849.1| Zea mays PCO066914 mRNA sequence Length = 1161 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 373 atctacttcaacatctacaacaagcaggt 401 ||||||||||||||||| ||||||||||| Sbjct: 34 atctacttcaacatctataacaagcaggt 62
>gb|U66402.1|NTU66402 Nicotiana tabacum plastid phosphate/phosphoenolpyruvate translocator precursor (TABPPT10) mRNA, complete cds Length = 1550 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Plus Query: 370 aacatctacttcaacatctacaacaagcaggtcct 404 ||||| ||||||||||| |||||||| |||||||| Sbjct: 376 aacatttacttcaacatttacaacaaacaggtcct 410
>ref|XM_474049.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1179 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 290 cggcggacgaggtggccgcggg 311 |||||||||||||||||||||| Sbjct: 122 cggcggacgaggtggccgcggg 101
>ref|NM_004097.2| Homo sapiens empty spiracles homolog 1 (Drosophila) (EMX1), transcript variant 1, mRNA Length = 2188 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 259 gcggcggctgctgcggcggagc 280 |||||||||||||||||||||| Sbjct: 245 gcggcggctgctgcggcggagc 224
>gb|BT012715.1| Lycopersicon esculentum clone 113597F, mRNA sequence Length = 1720 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Plus Query: 370 aacatctacttcaacatctacaacaa 395 ||||||||||||||||| |||||||| Sbjct: 496 aacatctacttcaacatttacaacaa 521
>ref|XM_994816.1| PREDICTED: Mus musculus splicing factor proline/glutamine rich (polypyrimidine tract binding protein associated), transcript variant 3 (Sfpq), mRNA Length = 4225 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 258 ggcggcggctgctgcggcggag 279 |||||||||||||||||||||| Sbjct: 1099 ggcggcggctgctgcggcggag 1078
>ref|XM_981759.1| PREDICTED: Mus musculus splicing factor proline/glutamine rich (polypyrimidine tract binding protein associated) (Sfpq), mRNA Length = 4075 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 258 ggcggcggctgctgcggcggag 279 |||||||||||||||||||||| Sbjct: 949 ggcggcggctgctgcggcggag 928
>ref|XM_857809.1| PREDICTED: Canis familiaris similar to ADP-ribosylation factor 3, transcript variant 2 (LOC486562), mRNA Length = 1077 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Plus Query: 257 aggcggcggctgctgcggcggagctg 282 ||||||||||||| |||||||||||| Sbjct: 142 aggcggcggctgcggcggcggagctg 167
>ref|XM_543688.2| PREDICTED: Canis familiaris similar to ADP-ribosylation factor 3, transcript variant 1 (LOC486562), mRNA Length = 1059 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Plus Query: 257 aggcggcggctgctgcggcggagctg 282 ||||||||||||| |||||||||||| Sbjct: 142 aggcggcggctgcggcggcggagctg 167
>gb|AY326794.1| Chlamydomonas reinhardtii putative phosphate/phosphoenolpyruvate translocator precursor (PPT2) mRNA, complete cds; nuclear gene for plastid product Length = 2235 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Plus Query: 370 aacatctacttcaacatctacaacaagcag 399 ||||||| |||||||||||| ||||||||| Sbjct: 379 aacatcttcttcaacatctataacaagcag 408
>gb|BC045762.1| Homo sapiens empty spiracles homolog 1 (Drosophila), mRNA (cDNA clone MGC:48662 IMAGE:5260039), complete cds Length = 1660 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 259 gcggcggctgctgcggcggagc 280 |||||||||||||||||||||| Sbjct: 245 gcggcggctgctgcggcggagc 224
>gb|BC089305.1| Mus musculus splicing factor proline/glutamine rich (polypyrimidine tract binding protein associated), mRNA (cDNA clone MGC:101933 IMAGE:30360144), complete cds Length = 3032 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 258 ggcggcggctgctgcggcggag 279 |||||||||||||||||||||| Sbjct: 327 ggcggcggctgctgcggcggag 306
>emb|AL606657.4|OSJN00101 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0034I13, complete sequence Length = 123480 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 290 cggcggacgaggtggccgcggg 311 |||||||||||||||||||||| Sbjct: 76148 cggcggacgaggtggccgcggg 76169
>ref|NM_023603.2| Mus musculus splicing factor proline/glutamine rich (polypyrimidine tract binding protein associated) (Sfpq), mRNA Length = 3032 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 258 ggcggcggctgctgcggcggag 279 |||||||||||||||||||||| Sbjct: 327 ggcggcggctgctgcggcggag 306
>gb|AY034062.1| Mus musculus PTB-associated splicing factor mRNA, complete cds Length = 2464 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 258 ggcggcggctgctgcggcggag 279 |||||||||||||||||||||| Sbjct: 276 ggcggcggctgctgcggcggag 255
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 290 cggcggacgaggtggccgcggg 311 |||||||||||||||||||||| Sbjct: 32459347 cggcggacgaggtggccgcggg 32459368
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 258 ggcggcggctgctgcggcggag 279 |||||||||||||||||||||| Sbjct: 8063538 ggcggcggctgctgcggcggag 8063517 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 378 cttcaacatctacaacaagcaggt 401 ||||||||||||||||||| |||| Sbjct: 20262213 cttcaacatctacaacaagaaggt 20262190 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 378 cttcaacatctacaacaagcaggt 401 ||||||||||||||||||| |||| Sbjct: 20243995 cttcaacatctacaacaagaaggt 20243972 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 378 cttcaacatctacaacaagcaggt 401 ||||||||||||||||||| |||| Sbjct: 20225778 cttcaacatctacaacaagaaggt 20225755 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 260 cggcggctgctgcggcggag 279 |||||||||||||||||||| Sbjct: 19866960 cggcggctgctgcggcggag 19866941
>gb|AC012366.10| Homo sapiens BAC clone RP11-466M21 from 2, complete sequence Length = 197775 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 259 gcggcggctgctgcggcggagc 280 |||||||||||||||||||||| Sbjct: 27761 gcggcggctgctgcggcggagc 27740
>gb|AC051625.6|AC051625 Genomic Sequence For Arabidopsis thaliana Clone F19N02 From Chromosome V, complete sequence Length = 116461 Score = 44.1 bits (22), Expect = 0.51 Identities = 31/34 (91%) Strand = Plus / Minus Query: 373 atctacttcaacatctacaacaagcaggtcctcc 406 |||||||||||||||||||| || ||||| |||| Sbjct: 73306 atctacttcaacatctacaataaacaggtactcc 73273
>gb|AF209210.1|AF209210 Arabidopsis thaliana phosphate/phosphoenolpyruvate translocator (PPT1) gene, complete cds Length = 3784 Score = 44.1 bits (22), Expect = 0.51 Identities = 31/34 (91%) Strand = Plus / Plus Query: 373 atctacttcaacatctacaacaagcaggtcctcc 406 |||||||||||||||||||| || ||||| |||| Sbjct: 1458 atctacttcaacatctacaataaacaggtactcc 1491
>dbj|AP003754.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1341_A08 Length = 128955 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 258 ggcggcggctgctgcggcggag 279 |||||||||||||||||||||| Sbjct: 101735 ggcggcggctgctgcggcggag 101714
>dbj|AB046439.1| Arabidopsis thaliana DNA, chromosome 5 centromere region, clone:F26J23 Length = 94609 Score = 44.1 bits (22), Expect = 0.51 Identities = 31/34 (91%) Strand = Plus / Plus Query: 373 atctacttcaacatctacaacaagcaggtcctcc 406 |||||||||||||||||||| || ||||| |||| Sbjct: 42999 atctacttcaacatctacaataaacaggtactcc 43032
>dbj|AK108202.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-140-D01, full insert sequence Length = 1305 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 290 cggcggacgaggtggccgcggg 311 |||||||||||||||||||||| Sbjct: 128 cggcggacgaggtggccgcggg 107
>gb|AY108967.1| Zea mays PCO119014 mRNA sequence Length = 1063 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 256 aaggcggcggctgctgcggcgg 277 |||||||||||||||||||||| Sbjct: 415 aaggcggcggctgctgcggcgg 436
>gb|BC080848.1| Mus musculus cDNA clone IMAGE:6813811, containing frame-shift errors Length = 3027 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 258 ggcggcggctgctgcggcggag 279 |||||||||||||||||||||| Sbjct: 327 ggcggcggctgctgcggcggag 306
>emb|AL606985.26| Mouse DNA sequence from clone RP23-153M14 on chromosome 4, complete sequence Length = 193947 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 258 ggcggcggctgctgcggcggag 279 |||||||||||||||||||||| Sbjct: 74898 ggcggcggctgctgcggcggag 74877
>gb|AC154042.1| Drosophila melanogaster clone BACR46E23, complete sequence Length = 181148 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 257 aggcggcggctgctgcggcgg 277 ||||||||||||||||||||| Sbjct: 174945 aggcggcggctgctgcggcgg 174925
>ref|NM_122856.2| Arabidopsis thaliana CUE1 (CAB UNDEREXPRESSED 1); antiporter/ triose-phosphate transporter AT5G33320 (CUE1) mRNA, complete cds Length = 1679 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 373 atctacttcaacatctacaacaagcaggt 401 |||||||||||||||||||| || ||||| Sbjct: 470 atctacttcaacatctacaataaacaggt 498
>ref|XM_468274.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2853 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 34 cacgccgagatgcagcgcgcggcgg 58 ||||||||| ||||||||||||||| Sbjct: 1521 cacgccgaggtgcagcgcgcggcgg 1497
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence Length = 3587082 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 34 cacgccgagatgcagcgcgcg 54 ||||||||||||||||||||| Sbjct: 2946823 cacgccgagatgcagcgcgcg 2946843
>gb|AC148870.2| Chlamydomonas reinhardtii clone cr-13O11, complete sequence Length = 56858 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 184 caggaacagccgcccgccgccctcc 208 |||||||||| |||||||||||||| Sbjct: 13821 caggaacagcagcccgccgccctcc 13797
>ref|XM_954586.1| Neurospora crassa OR74A hypothetical protein (NCU08136.1) partial mRNA Length = 2076 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 256 aaggcggcggctgctgcggcg 276 ||||||||||||||||||||| Sbjct: 1522 aaggcggcggctgctgcggcg 1542
>ref|XM_328841.1| Neurospora crassa OR74A hypothetical protein (NCU08136.1) partial mRNA Length = 2076 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 256 aaggcggcggctgctgcggcg 276 ||||||||||||||||||||| Sbjct: 1522 aaggcggcggctgctgcggcg 1542
>gb|AC108822.9| Mus musculus chromosome 3, clone RP23-63A19, complete sequence Length = 158678 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 209 ccatgtccctgtcgctgctct 229 ||||||||||||||||||||| Sbjct: 127177 ccatgtccctgtcgctgctct 127157
>gb|AE009110.1| Agrobacterium tumefaciens str. C58 circular chromosome, section 136 of 256 of the complete sequence Length = 12023 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 39 cgagatgcagcgcgcggcggc 59 ||||||||||||||||||||| Sbjct: 1646 cgagatgcagcgcgcggcggc 1626
>gb|AC146132.3| Pan troglodytes BAC clone RP43-23H13 from 7, complete sequence Length = 164355 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 62 ccctcgcctcctcccgctcag 82 ||||||||||||||||||||| Sbjct: 98391 ccctcgcctcctcccgctcag 98371
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 259 gcggcggctgctgcggcggag 279 ||||||||||||||||||||| Sbjct: 7490307 gcggcggctgctgcggcggag 7490327 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 258 ggcggcggctgctgcggcgg 277 |||||||||||||||||||| Sbjct: 1320023 ggcggcggctgctgcggcgg 1320042
>gb|AC125081.3| Mus musculus BAC clone RP24-89D17 from chromosome 3, complete sequence Length = 220895 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 209 ccatgtccctgtcgctgctct 229 ||||||||||||||||||||| Sbjct: 196313 ccatgtccctgtcgctgctct 196333
>gb|AC142299.1| Pan troglodytes BAC clone RP43-121O18 from 7, complete sequence Length = 146878 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 62 ccctcgcctcctcccgctcag 82 ||||||||||||||||||||| Sbjct: 91523 ccctcgcctcctcccgctcag 91543
>gb|AC124952.15| Medicago truncatula clone mth2-24m24, complete sequence Length = 134356 Score = 42.1 bits (21), Expect = 2.0 Identities = 39/45 (86%) Strand = Plus / Minus Query: 357 atggtacctccccaacatctacttcaacatctacaacaagcaggt 401 |||||||||| |||||||||||||| || |||||||| ||||| Sbjct: 1575 atggtacctctttaacatctacttcaatatttacaacaaacaggt 1531
>gb|AC144441.2| Homo sapiens fosmid clone XXFOS-86107B5 from 7, complete sequence Length = 31767 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 62 ccctcgcctcctcccgctcag 82 ||||||||||||||||||||| Sbjct: 21711 ccctcgcctcctcccgctcag 21731
>gb|AY133809.1| Arabidopsis thaliana clone U10309 putative phosphate/phosphoenolpyruvate translocator precursor protein (At5g33320) mRNA, complete cds Length = 1258 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 373 atctacttcaacatctacaacaagcaggt 401 |||||||||||||||||||| || ||||| Sbjct: 358 atctacttcaacatctacaataaacaggt 386
>gb|AY080788.1| Arabidopsis thaliana putative phosphate/phosphoenolpyruvate translocator precursor protein (At5g33320) mRNA, complete cds Length = 1647 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 373 atctacttcaacatctacaacaagcaggt 401 |||||||||||||||||||| || ||||| Sbjct: 470 atctacttcaacatctacaataaacaggt 498
>emb|AJ440217.1|OSA440217 Oryza sativa a6 gene for plasma membrane H+-ATPase Length = 4058 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 34 cacgccgagatgcagcgcgcggcgg 58 ||||||||| ||||||||||||||| Sbjct: 1601 cacgccgaggtgcagcgcgcggcgg 1577
>gb|AF223359.1| Mesembryanthemum crystallinum phosphoenolpyruvate/phosphate translocator precursor (PPT) mRNA, complete cds Length = 1591 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 373 atctacttcaacatctacaacaagcaggt 401 ||||||||||| || |||||||||||||| Sbjct: 412 atctacttcaatatttacaacaagcaggt 440
>gb|AC157538.19| Medicago truncatula clone mth2-150a17, complete sequence Length = 102530 Score = 42.1 bits (21), Expect = 2.0 Identities = 39/45 (86%) Strand = Plus / Plus Query: 357 atggtacctccccaacatctacttcaacatctacaacaagcaggt 401 |||||||||| |||||||||||||| || |||||||| ||||| Sbjct: 69664 atggtacctctttaacatctacttcaatatttacaacaaacaggt 69708
>gb|AY118358.1| Drosophila melanogaster RE04357 full insert cDNA Length = 4217 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 257 aggcggcggctgctgcggcgg 277 ||||||||||||||||||||| Sbjct: 292 aggcggcggctgctgcggcgg 312
>gb|AC131239.20| Medicago truncatula clone mth2-18o15, complete sequence Length = 140751 Score = 42.1 bits (21), Expect = 2.0 Identities = 39/45 (86%) Strand = Plus / Plus Query: 357 atggtacctccccaacatctacttcaacatctacaacaagcaggt 401 |||||||||| |||||||||||||| || |||||||| ||||| Sbjct: 76536 atggtacctctttaacatctacttcaatatttacaacaaacaggt 76580
>gb|AC023691.3| Drosophila melanogaster X BAC RP98-12H1 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 179892 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 257 aggcggcggctgctgcggcgg 277 ||||||||||||||||||||| Sbjct: 47208 aggcggcggctgctgcggcgg 47188
>ref|NM_167312.1| Drosophila melanogaster CG10353-RB, transcript variant B (CG10353), mRNA Length = 4660 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 257 aggcggcggctgctgcggcgg 277 ||||||||||||||||||||| Sbjct: 574 aggcggcggctgctgcggcgg 594
>ref|NM_132534.1| Drosophila melanogaster CG10353-RA, transcript variant A (CG10353), mRNA Length = 4378 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 257 aggcggcggctgctgcggcgg 277 ||||||||||||||||||||| Sbjct: 292 aggcggcggctgctgcggcgg 312
>gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome Length = 2841581 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 39 cgagatgcagcgcgcggcggc 59 ||||||||||||||||||||| Sbjct: 1500237 cgagatgcagcgcgcggcggc 1500217
>dbj|AB179413.1| Macaca fascicularis testis cDNA clone: QtsA-19426, similar to human Kruppel-like factor 4 (gut) (KLF4), mRNA, RefSeq: NM_004235.3 Length = 2570 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 258 ggcggcggctgctgcggcgga 278 ||||||||||||||||||||| Sbjct: 1386 ggcggcggctgctgcggcgga 1366
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 259 gcggcggctgctgcggcggag 279 ||||||||||||||||||||| Sbjct: 7488142 gcggcggctgctgcggcggag 7488162 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 258 ggcggcggctgctgcggcgg 277 |||||||||||||||||||| Sbjct: 1320021 ggcggcggctgctgcggcgg 1320040
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 34 cacgccgagatgcagcgcgcggcgg 58 ||||||||| ||||||||||||||| Sbjct: 33951890 cacgccgaggtgcagcgcgcggcgg 33951866 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 35 acgccgagatgcagcgcgcggcgg 58 |||||||| ||||||||||||||| Sbjct: 34986854 acgccgagctgcagcgcgcggcgg 34986831
>emb|BX832053.1|CNS0A1MZ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH49ZA10 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1553 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 373 atctacttcaacatctacaacaagcaggt 401 |||||||||||||||||||| || ||||| Sbjct: 451 atctacttcaacatctacaataaacaggt 479
>gb|AC134239.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0042A11, complete sequence Length = 113049 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 259 gcggcggctgctgcggcggag 279 ||||||||||||||||||||| Sbjct: 19203 gcggcggctgctgcggcggag 19223
>gb|AY086100.1| Arabidopsis thaliana clone 21316 mRNA, complete sequence Length = 1571 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 373 atctacttcaacatctacaacaagcaggt 401 |||||||||||||||||||| || ||||| Sbjct: 454 atctacttcaacatctacaataaacaggt 482
>dbj|AP000364.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0026F07 Length = 137354 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 261 ggcggctgctgcggcggagct 281 ||||||||||||||||||||| Sbjct: 14557 ggcggctgctgcggcggagct 14577
>emb|BX511240.5| Zebrafish DNA sequence from clone CH211-113H10, complete sequence Length = 175187 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 369 caacatctacttcaacatctacaac 393 ||||||||||| ||||||||||||| Sbjct: 97088 caacatctactacaacatctacaac 97112
>dbj|AP003975.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1004_E04 Length = 133621 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 34 cacgccgagatgcagcgcgcggcgg 58 ||||||||| ||||||||||||||| Sbjct: 110853 cacgccgaggtgcagcgcgcggcgg 110829
>dbj|AP005148.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1142B04 Length = 161964 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 261 ggcggctgctgcggcggagct 281 ||||||||||||||||||||| Sbjct: 122013 ggcggctgctgcggcggagct 122033
>dbj|AK121272.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023107A16, full insert sequence Length = 3134 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 34 cacgccgagatgcagcgcgcggcgg 58 ||||||||| ||||||||||||||| Sbjct: 1498 cacgccgaggtgcagcgcgcggcgg 1474
>dbj|AK069304.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023010M20, full insert sequence Length = 1003 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 259 gcggcggctgctgcggcggag 279 ||||||||||||||||||||| Sbjct: 408 gcggcggctgctgcggcggag 428
>dbj|AK065146.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002A22, full insert sequence Length = 1726 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 259 gcggcggctgctgcggcggag 279 ||||||||||||||||||||| Sbjct: 770 gcggcggctgctgcggcggag 750
>gb|AE003487.2| Drosophila melanogaster chromosome X, section 39 of 74 of the complete sequence Length = 308317 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 257 aggcggcggctgctgcggcgg 277 ||||||||||||||||||||| Sbjct: 174649 aggcggcggctgctgcggcgg 174629
>gb|U66321.1|ATU66321 Arabidopsis thaliana phosphate/phosphoenolpyruvate translocator precursor (AraPPT) mRNA, complete cds Length = 1511 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 373 atctacttcaacatctacaacaagcaggt 401 |||||||||||||||||||| || ||||| Sbjct: 414 atctacttcaacatctacaataaacaggt 442
>gb|AC117698.19| Mus musculus chromosome 5, clone RP23-451A12, complete sequence Length = 180809 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 399 ggtcctccaggtgctgccat 418 |||||||||||||||||||| Sbjct: 84569 ggtcctccaggtgctgccat 84588
>ref|NM_104862.2| Arabidopsis thaliana antiporter/ glucose-6-phosphate transporter AT1G61800 mRNA, complete cds Length = 1541 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 378 cttcaacatctacaacaagcaggtcctc 405 ||||||||||||||||||| | |||||| Sbjct: 417 cttcaacatctacaacaagaaagtcctc 444
>ref|XM_481213.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1650 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 257 aggcggcggctgctgcggcggagc 280 ||||||||||||| |||||||||| Sbjct: 53 aggcggcggctgcggcggcggagc 76
>ref|XM_483028.1| Oryza sativa (japonica cultivar-group), mRNA Length = 948 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 258 ggcggcggctgctgcggcgg 277 |||||||||||||||||||| Sbjct: 587 ggcggcggctgctgcggcgg 568
>ref|XM_480589.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1768 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 542 cgccgctggccgccgggcac 561 |||||||||||||||||||| Sbjct: 241 cgccgctggccgccgggcac 260
>ref|XM_468589.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 516 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 258 ggcggcggctgctgcggcgg 277 |||||||||||||||||||| Sbjct: 69 ggcggcggctgctgcggcgg 88
>ref|XM_468393.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1517 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 35 acgccgagatgcagcgcgcggcgg 58 |||||||| ||||||||||||||| Sbjct: 794 acgccgagctgcagcgcgcggcgg 817
>ref|XM_507548.1| PREDICTED Oryza sativa (japonica cultivar-group), P0643F09.14 mRNA Length = 1525 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 35 acgccgagatgcagcgcgcggcgg 58 |||||||| ||||||||||||||| Sbjct: 794 acgccgagctgcagcgcgcggcgg 817
>ref|XM_507046.2| PREDICTED Oryza sativa (japonica cultivar-group), P0643F09.14 mRNA Length = 1558 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 35 acgccgagatgcagcgcgcggcgg 58 |||||||| ||||||||||||||| Sbjct: 794 acgccgagctgcagcgcgcggcgg 817
>ref|NM_193349.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1791 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 55 gcggcctccctcgcctcctcccgc 78 |||| ||||||||||||||||||| Sbjct: 292 gcgggctccctcgcctcctcccgc 315
>ref|XM_478466.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1179 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 378 cttcaacatctacaacaagcaggt 401 ||||||||||||||||||| |||| Sbjct: 342 cttcaacatctacaacaagaaggt 365
>ref|XM_478462.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1179 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 378 cttcaacatctacaacaagcaggt 401 ||||||||||||||||||| |||| Sbjct: 342 cttcaacatctacaacaagaaggt 365
>ref|XM_478458.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1179 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 378 cttcaacatctacaacaagcaggt 401 ||||||||||||||||||| |||| Sbjct: 342 cttcaacatctacaacaagaaggt 365
>gb|AF488415.1| Triticum monococcum chromosome 7Am BAC 5K14 complete sequence Length = 168746 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 148 cgccgcgacgccgtcgtgcc 167 |||||||||||||||||||| Sbjct: 125349 cgccgcgacgccgtcgtgcc 125330
>gb|AY023280.1| Oryza sativa microsatellite MRG5605 containing (GGC)X8, closest to marker C185, genomic sequence Length = 224 Score = 40.1 bits (20), Expect = 8.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 249 gacggcaaaggcggcggctgctgcggcggagc 280 |||||| ||||||||||| || |||||||||| Sbjct: 164 gacggcgaaggcggcggcggcggcggcggagc 195
>gb|BC027785.1| Mus musculus cold shock domain protein A, mRNA (cDNA clone MGC:35850 IMAGE:5345031), complete cds Length = 1676 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 540 cgcgccgctggccgccgggc 559 |||||||||||||||||||| Sbjct: 323 cgcgccgctggccgccgggc 304
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome Length = 3345170 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 258 ggcggcggctgctgcggcgg 277 |||||||||||||||||||| Sbjct: 2872872 ggcggcggctgctgcggcgg 2872891 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 537 gatcgcgccgctggccgccg 556 |||||||||||||||||||| Sbjct: 2345300 gatcgcgccgctggccgccg 2345281
>ref|XM_370203.1| Magnaporthe grisea 70-15 chromosome II hypothetical protein (MG06700.4) partial mRNA Length = 2949 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 258 ggcggcggctgctgcggcgg 277 |||||||||||||||||||| Sbjct: 225 ggcggcggctgctgcggcgg 206
>gb|BC012518.1| Mus musculus tight junction protein 3, mRNA (cDNA clone MGC:11960 IMAGE:3600848), complete cds Length = 2984 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 aggcggcggctgctgcggcg 276 |||||||||||||||||||| Sbjct: 2341 aggcggcggctgctgcggcg 2322
>ref|NM_139117.2| Mus musculus cold shock domain protein A (Csda), mRNA Length = 1862 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 540 cgcgccgctggccgccgggc 559 |||||||||||||||||||| Sbjct: 312 cgcgccgctggccgccgggc 293
>ref|NM_011733.2| Mus musculus cold shock domain protein A (Csda), mRNA Length = 1655 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 540 cgcgccgctggccgccgggc 559 |||||||||||||||||||| Sbjct: 312 cgcgccgctggccgccgggc 293
>ref|NM_031979.2| Rattus norvegicus cold shock domain protein A (Csda), mRNA Length = 1900 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 540 cgcgccgctggccgccgggc 559 |||||||||||||||||||| Sbjct: 295 cgcgccgctggccgccgggc 276
>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome Length = 6093698 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 307 gcgggcggcggcattgccggcacggtgc 334 ||||||||||| |||||| ||||||||| Sbjct: 5739480 gcgggcggcggtattgccagcacggtgc 5739507
>gb|AY100692.1| Oryza sativa (japonica cultivar-group) alpha expansin 26 (EXPA26) mRNA, complete cds Length = 1011 Score = 40.1 bits (20), Expect = 8.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 249 gacggcaaaggcggcggctgctgcggcggagc 280 |||||| ||||||||||| || |||||||||| Sbjct: 167 gacggcgaaggcggcggcggcggcggcggagc 198
>gb|AF394561.1| Oryza sativa alpha-expansin OsEXPA26 (EXPA26) gene, complete cds Length = 6312 Score = 40.1 bits (20), Expect = 8.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 249 gacggcaaaggcggcggctgctgcggcggagc 280 |||||| ||||||||||| || |||||||||| Sbjct: 4088 gacggcgaaggcggcggcggcggcggcggagc 4119
>gb|CP000080.1| Leishmania major strain Friedlin chromosome 29, complete sequence Length = 1212674 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 96 gtgcacctccaccacctcgc 115 |||||||||||||||||||| Sbjct: 230502 gtgcacctccaccacctcgc 230521
>ref|XM_846445.1| PREDICTED: Canis familiaris similar to LIM domain only 6, transcript variant 3 (LOC491874), mRNA Length = 1894 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 258 ggcggcggctgctgcggcgg 277 |||||||||||||||||||| Sbjct: 1595 ggcggcggctgctgcggcgg 1576
>ref|XM_916661.2| PREDICTED: Mus musculus MYC-associated zinc finger protein (purine-binding transcription factor), transcript variant 5 (Maz), mRNA Length = 2709 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 258 ggcggcggctgctgcggcgg 277 |||||||||||||||||||| Sbjct: 433 ggcggcggctgctgcggcgg 452
>ref|XM_984835.1| PREDICTED: Mus musculus MYC-associated zinc finger protein (purine-binding transcription factor) (Maz), mRNA Length = 1690 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 258 ggcggcggctgctgcggcgg 277 |||||||||||||||||||| Sbjct: 141 ggcggcggctgctgcggcgg 160
>ref|XM_001002765.1| PREDICTED: Mus musculus MYC-associated zinc finger protein (purine-binding transcription factor) (Maz), mRNA Length = 2862 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 258 ggcggcggctgctgcggcgg 277 |||||||||||||||||||| Sbjct: 586 ggcggcggctgctgcggcgg 605
>gb|AC105429.3| Homo sapiens chromosome 16 clone RP11-106D4, complete sequence Length = 160582 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 258 ggcggcggctgctgcggcgg 277 |||||||||||||||||||| Sbjct: 82363 ggcggcggctgctgcggcgg 82382
>ref|XM_842627.1| Leishmania major strain Friedlin ABC transporter (LMJ_0697) partial mRNA Length = 5601 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 gtgcacctccaccacctcgc 115 |||||||||||||||||||| Sbjct: 5448 gtgcacctccaccacctcgc 5429
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 88 gcctgggcgtgcacctccaccacctcgc 115 |||||| | ||||||||||||||||||| Sbjct: 3264551 gcctggacctgcacctccaccacctcgc 3264578
>gb|AC122863.4| Mus musculus BAC clone RP23-142A14 from chromosome 7, complete sequence Length = 226601 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 258 ggcggcggctgctgcggcgg 277 |||||||||||||||||||| Sbjct: 166787 ggcggcggctgctgcggcgg 166768
>gb|BC004758.1| Mus musculus MYC-associated zinc finger protein (purine-binding transcription factor), mRNA (cDNA clone IMAGE:3154686), containing frame-shift errors Length = 2152 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 258 ggcggcggctgctgcggcgg 277 |||||||||||||||||||| Sbjct: 258 ggcggcggctgctgcggcgg 277
>gb|AC122537.4| Mus musculus BAC clone RP24-548A15 from chromosome 7, complete sequence Length = 195987 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 258 ggcggcggctgctgcggcgg 277 |||||||||||||||||||| Sbjct: 1122 ggcggcggctgctgcggcgg 1103
>gb|AC122191.4| Mus musculus BAC clone RP23-42J4 from 6, complete sequence Length = 250147 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 540 cgcgccgctggccgccgggc 559 |||||||||||||||||||| Sbjct: 202509 cgcgccgctggccgccgggc 202528
>gb|AF480884.1| Chimpanzee cytomegalovirus, complete genome Length = 241087 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 254 caaaggcggcggctgctgcggcgg 277 ||||||||| |||||||||||||| Sbjct: 100402 caaaggcggtggctgctgcggcgg 100379
>gb|CP000088.1| Thermobifida fusca YX, complete genome Length = 3642249 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 258 ggcggcggctgctgcggcgg 277 |||||||||||||||||||| Sbjct: 2600685 ggcggcggctgctgcggcgg 2600666
>gb|AC155932.6| Mus musculus BAC clone RP23-85K13 from chromosome 10, complete sequence Length = 239525 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 aggcggcggctgctgcggcg 276 |||||||||||||||||||| Sbjct: 234236 aggcggcggctgctgcggcg 234255
>gb|BC041874.1| Homo sapiens microtubule-associated protein 1 light chain 3 beta, mRNA (cDNA clone MGC:43743 IMAGE:5271912), complete cds Length = 2701 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 258 ggcggcggctgctgcggcgg 277 |||||||||||||||||||| Sbjct: 569 ggcggcggctgctgcggcgg 550
>gb|BC067797.1| Homo sapiens microtubule-associated protein 1 light chain 3 beta, mRNA (cDNA clone MGC:87244 IMAGE:5276841), complete cds Length = 2153 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 258 ggcggcggctgctgcggcgg 277 |||||||||||||||||||| Sbjct: 25 ggcggcggctgctgcggcgg 6
>emb|AL833124.1|HSM804435 Homo sapiens mRNA; cDNA DKFZp313D0632 (from clone DKFZp313D0632) Length = 3250 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 526 cagctggccaagatcgcgcc 545 |||||||||||||||||||| Sbjct: 1013 cagctggccaagatcgcgcc 1032
>emb|AL663055.13| Mouse DNA sequence from clone RP23-102H8 on chromosome 11 Contains the 5' end of the Gria1 gene for glutamate receptor, ionotropic, AMPA1 (alpha 1), complete sequence Length = 202981 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 93 ggcgtgcacctccaccacct 112 |||||||||||||||||||| Sbjct: 115523 ggcgtgcacctccaccacct 115542
>gb|AC091734.3| Genomic Sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0068A07, from Chromosome 10, complete sequence Length = 154505 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 93 ggcgtgcacctccaccacctcgcg 116 ||||| |||||||||||||||||| Sbjct: 75616 ggcgtccacctccaccacctcgcg 75639
>gb|AF448808.1| Synthetic construct antifreeze protein IIA8 mRNA, complete cds Length = 222 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 258 ggcggcggctgctgcggcgg 277 |||||||||||||||||||| Sbjct: 132 ggcggcggctgctgcggcgg 113 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 258 ggcggcggctgctgcggcgg 277 |||||||||||||||||||| Sbjct: 99 ggcggcggctgctgcggcgg 80
>gb|AF448487.1| Pseudopleuronectes americanus type I antifreeze protein IIA8 precursor, mRNA, complete cds Length = 372 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 258 ggcggcggctgctgcggcgg 277 |||||||||||||||||||| Sbjct: 183 ggcggcggctgctgcggcgg 164 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 258 ggcggcggctgctgcggcgg 277 |||||||||||||||||||| Sbjct: 150 ggcggcggctgctgcggcgg 131
>gb|AE006020.1| Caulobacter crescentus CB15 section 346 of 359 of the complete genome Length = 10680 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 527 agctggccaagatcgcgccg 546 |||||||||||||||||||| Sbjct: 912 agctggccaagatcgcgccg 893
>gb|AE011911.1| Xanthomonas axonopodis pv. citri str. 306, section 289 of 469 of the complete genome Length = 12607 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 88 gcctgggcgtgcacctccaccacctcgc 115 |||||| | ||||||||||||||||||| Sbjct: 9141 gcctggacctgcacctccaccacctcgc 9168
>gb|DQ298186.1| Oryza sativa (japonica cultivar-group) WRKY transcription factor 82 mRNA, complete cds Length = 2098 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 257 aggcggcggctgctgcggcggagc 280 ||||||||||||| |||||||||| Sbjct: 108 aggcggcggctgcggcggcggagc 131
>ref|NM_206431.1| Drosophila melanogaster CG2519-RB, transcript variant B (CG2519), mRNA Length = 5593 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 557 ggcacatgctgggcacggtg 576 |||||||||||||||||||| Sbjct: 3469 ggcacatgctgggcacggtg 3450
>ref|NM_141289.2| Drosophila melanogaster CG2519-RA, transcript variant A (CG2519), mRNA Length = 5665 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 557 ggcacatgctgggcacggtg 576 |||||||||||||||||||| Sbjct: 3541 ggcacatgctgggcacggtg 3522
>gb|AF232689.2| Rat cytomegalovirus Maastricht, complete genome Length = 230138 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 258 ggcggcggctgctgcggcgg 277 |||||||||||||||||||| Sbjct: 22323 ggcggcggctgctgcggcgg 22304
>gb|AY081479.1| Arabidopsis thaliana similar to glucose-6-phosphate/phosphate-translocator (At1g61800) mRNA, complete cds Length = 1263 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 378 cttcaacatctacaacaagcaggtcctc 405 ||||||||||||||||||| | |||||| Sbjct: 330 cttcaacatctacaacaagaaagtcctc 357
>ref|NM_133036.1| Drosophila melanogaster CG15373-RA (CG15373), mRNA Length = 3396 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 252 ggcaaaggcggcggctgctg 271 |||||||||||||||||||| Sbjct: 2367 ggcaaaggcggcggctgctg 2348
>gb|AF087871.1| Homo sapiens microtubule-associated proteins 1A and 1B light chain 3 subunit mRNA, complete cds Length = 2157 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 258 ggcggcggctgctgcggcgg 277 |||||||||||||||||||| Sbjct: 33 ggcggcggctgctgcggcgg 14
>dbj|AK134100.1| Mus musculus adult male thymus cDNA, RIKEN full-length enriched library, clone:5830435P20 product:tight junction protein 3, full insert sequence Length = 3025 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 aggcggcggctgctgcggcg 276 |||||||||||||||||||| Sbjct: 2377 aggcggcggctgctgcggcg 2358
>dbj|AK167587.1| Mus musculus 14 days pregnant adult female amnion cDNA, RIKEN full-length enriched library, clone:I530024A16 product:tight junction protein 3, full insert sequence Length = 2904 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 aggcggcggctgctgcggcg 276 |||||||||||||||||||| Sbjct: 2278 aggcggcggctgctgcggcg 2259
>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome Length = 3561584 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 144 cgcgcgccgcgacgccgtcg 163 |||||||||||||||||||| Sbjct: 2676410 cgcgcgccgcgacgccgtcg 2676391
>dbj|AK003145.1| Mus musculus 18-day embryo whole body cDNA, RIKEN full-length enriched library, clone:1100001A17 product:cold shock domain protein A, full insert sequence Length = 1586 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 540 cgcgccgctggccgccgggc 559 |||||||||||||||||||| Sbjct: 246 cgcgccgctggccgccgggc 227
>gb|AY051864.1| Drosophila melanogaster LD36006 full length cDNA Length = 5659 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 557 ggcacatgctgggcacggtg 576 |||||||||||||||||||| Sbjct: 3522 ggcacatgctgggcacggtg 3503
>dbj|AK029083.1| Mus musculus 10 days neonate skin cDNA, RIKEN full-length enriched library, clone:4732489K14 product:TIGHT JUNCTION PROTEIN ZO-3 (ZONULA OCCLUDENS 3 PROTEIN) (ZONA OCCLUDENS 3 PROTEIN) (TIGHT JUNCTION PROTEIN 3), full insert sequence Length = 2971 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 aggcggcggctgctgcggcg 276 |||||||||||||||||||| Sbjct: 2323 aggcggcggctgctgcggcg 2304
>dbj|AK008855.1| Mus musculus adult male stomach cDNA, RIKEN full-length enriched library, clone:2210408F05 product:tight junction protein 3, full insert sequence Length = 1355 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 aggcggcggctgctgcggcg 276 |||||||||||||||||||| Sbjct: 729 aggcggcggctgctgcggcg 710
>gb|AY042874.1| Arabidopsis thaliana Similar to glucose-6-phosphate/phosphate-translocator (F8K4.1) mRNA, complete cds Length = 1537 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 378 cttcaacatctacaacaagcaggtcctc 405 ||||||||||||||||||| | |||||| Sbjct: 417 cttcaacatctacaacaagaaagtcctc 444
>dbj|AK076041.1| Mus musculus 10 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2610510O09 product:cold shock domain protein A, full insert sequence Length = 1590 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 540 cgcgccgctggccgccgggc 559 |||||||||||||||||||| Sbjct: 251 cgcgccgctggccgccgggc 232
>gb|AC012163.13|AC012163 Drosophila melanogaster, chromosome X, region 16F-16F, BAC clone BACR17D02, complete sequence Length = 186748 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 252 ggcaaaggcggcggctgctg 271 |||||||||||||||||||| Sbjct: 139498 ggcaaaggcggcggctgctg 139479
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 8.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 249 gacggcaaaggcggcggctgctgcggcggagc 280 |||||| ||||||||||| || |||||||||| Sbjct: 22123366 gacggcgaaggcggcggcggcggcggcggagc 22123397
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 93 ggcgtgcacctccaccacctcgcg 116 ||||| |||||||||||||||||| Sbjct: 12555529 ggcgtccacctccaccacctcgcg 12555552
>gb|AC009538.4|AC009538 Drosophila melanogaster, chromosome 3R, region 83A-83A, BAC clone BACR24O24, complete sequence Length = 173927 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 557 ggcacatgctgggcacggtg 576 |||||||||||||||||||| Sbjct: 86104 ggcacatgctgggcacggtg 86123
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 ctccctcgcctcctcccgct 79 |||||||||||||||||||| Sbjct: 27635339 ctccctcgcctcctcccgct 27635320 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 258 ggcggcggctgctgcggcgg 277 |||||||||||||||||||| Sbjct: 21914107 ggcggcggctgctgcggcgg 21914126 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 258 ggcggcggctgctgcggcgg 277 |||||||||||||||||||| Sbjct: 8312721 ggcggcggctgctgcggcgg 8312702
>gb|AC010531.8| Homo sapiens chromosome 16 clone RP11-178L8, complete sequence Length = 175051 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 258 ggcggcggctgctgcggcgg 277 |||||||||||||||||||| Sbjct: 151974 ggcggcggctgctgcggcgg 151955
>gb|AY779624.1| Myxococcus xanthus strain DK1622 rod locus, complete sequence Length = 15900 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 294 ggacgaggtggccgcgggcg 313 |||||||||||||||||||| Sbjct: 3946 ggacgaggtggccgcgggcg 3965
>gb|AF248547.1|AF248547 Mus musculus Y-box protein 3 short isoform mRNA, complete cds; alternatively spliced Length = 1507 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 540 cgcgccgctggccgccgggc 559 |||||||||||||||||||| Sbjct: 134 cgcgccgctggccgccgggc 115
>gb|AF248546.1|AF248546 Mus musculus Y-box protein 3 long isoform mRNA, complete cds; alternatively spliced Length = 1714 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 540 cgcgccgctggccgccgggc 559 |||||||||||||||||||| Sbjct: 134 cgcgccgctggccgccgggc 115
>gb|L35549.1|MUSYBIC Mus musculus Y-box binding protein (oxyR) mRNA, partial cds Length = 2437 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 540 cgcgccgctggccgccgggc 559 |||||||||||||||||||| Sbjct: 79 cgcgccgctggccgccgggc 60
>dbj|AP004231.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0026J14 Length = 163496 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 55 gcggcctccctcgcctcctcccgc 78 |||| ||||||||||||||||||| Sbjct: 76750 gcgggctccctcgcctcctcccgc 76773
>gb|AC073896.41| Homo sapiens 12 BAC RP11-977G19 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 174487 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 526 cagctggccaagatcgcgcc 545 |||||||||||||||||||| Sbjct: 148226 cagctggccaagatcgcgcc 148245
>ref|NM_013769.1| Mus musculus tight junction protein 3 (Tjp3), mRNA Length = 2974 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 aggcggcggctgctgcggcg 276 |||||||||||||||||||| Sbjct: 2347 aggcggcggctgctgcggcg 2328
>gb|AY177787.1| Chlamydomonas reinhardtii putative phosphate/phosphoenolpyruvate translocator precursor protein (PPT) mRNA, complete cds; nuclear gene for plastid product Length = 2057 Score = 40.1 bits (20), Expect = 8.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 368 ccaacatctacttcaacatctacaacaagcag 399 |||||||| |||||||||||| ||||||||| Sbjct: 318 ccaacatcgccttcaacatctataacaagcag 349
>ref|XM_234924.3| PREDICTED: Rattus norvegicus tight junction protein 3 (predicted) (Tjp3_predicted), mRNA Length = 2814 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 aggcggcggctgctgcggcg 276 |||||||||||||||||||| Sbjct: 2252 aggcggcggctgctgcggcg 2233
>gb|AF183417.1|AF183417 Homo sapiens microtubule-associated proteins 1A/1B light chain 3 mRNA, complete cds Length = 1937 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 258 ggcggcggctgctgcggcgg 277 |||||||||||||||||||| Sbjct: 33 ggcggcggctgctgcggcgg 14
>gb|AC098695.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1126B12, complete sequence Length = 146241 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 258 ggcggcggctgctgcggcgg 277 |||||||||||||||||||| Sbjct: 124925 ggcggcggctgctgcggcgg 124944
>dbj|AP003827.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1372_D12 Length = 179898 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 378 cttcaacatctacaacaagcaggt 401 ||||||||||||||||||| |||| Sbjct: 164601 cttcaacatctacaacaagaaggt 164578 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 378 cttcaacatctacaacaagcaggt 401 ||||||||||||||||||| |||| Sbjct: 146383 cttcaacatctacaacaagaaggt 146360 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 378 cttcaacatctacaacaagcaggt 401 ||||||||||||||||||| |||| Sbjct: 128166 cttcaacatctacaacaagaaggt 128143
>gb|AF246224.1|AF246224 Mus musculus testis RNA binding protein MSY4 mRNA, complete cds Length = 1678 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 540 cgcgccgctggccgccgggc 559 |||||||||||||||||||| Sbjct: 154 cgcgccgctggccgccgggc 135
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 537 gatcgcgccgctggccgccg 556 |||||||||||||||||||| Sbjct: 4493152 gatcgcgccgctggccgccg 4493171
>dbj|AP004729.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0006A22 Length = 190690 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 258 ggcggcggctgctgcggcgg 277 |||||||||||||||||||| Sbjct: 136592 ggcggcggctgctgcggcgg 136611
>dbj|AP006055.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0778G11 Length = 59211 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 ctccctcgcctcctcccgct 79 |||||||||||||||||||| Sbjct: 39522 ctccctcgcctcctcccgct 39503
>dbj|AP005527.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0603C10 Length = 187620 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 258 ggcggcggctgctgcggcgg 277 |||||||||||||||||||| Sbjct: 106226 ggcggcggctgctgcggcgg 106207
>dbj|AP003858.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1014_H11 Length = 122464 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 542 cgccgctggccgccgggcac 561 |||||||||||||||||||| Sbjct: 100537 cgccgctggccgccgggcac 100556
>dbj|AP005103.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0036M16 Length = 158880 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 260 cggcggctgctgcggcggag 279 |||||||||||||||||||| Sbjct: 31610 cggcggctgctgcggcggag 31591
>dbj|AP005320.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0650C03 Length = 144337 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 260 cggcggctgctgcggcggag 279 |||||||||||||||||||| Sbjct: 107119 cggcggctgctgcggcggag 107100
>dbj|AP005105.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0052O11 Length = 106467 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 378 cttcaacatctacaacaagcaggt 401 ||||||||||||||||||| |||| Sbjct: 4824 cttcaacatctacaacaagaaggt 4801
>dbj|AP005111.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0643F09 Length = 161001 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 35 acgccgagatgcagcgcgcggcgg 58 |||||||| ||||||||||||||| Sbjct: 47195 acgccgagctgcagcgcgcggcgg 47172
>gb|AE005013.1| Halobacterium sp. NRC-1 section 44 of 170 of the complete genome Length = 13256 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 114 gcgccatgccggcaccggcg 133 |||||||||||||||||||| Sbjct: 8927 gcgccatgccggcaccggcg 8908
>emb|X53718.1|PAANTIFR P.americanus gene for antifreeze protein Length = 1301 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 258 ggcggcggctgctgcggcgg 277 |||||||||||||||||||| Sbjct: 912 ggcggcggctgctgcggcgg 893 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 258 ggcggcggctgctgcggcgg 277 |||||||||||||||||||| Sbjct: 879 ggcggcggctgctgcggcgg 860
>emb|X06356.1|LFAFPR Yellowtail flounder mRNA for antifreeze protein (AFP) Length = 416 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 258 ggcggcggctgctgcggcgg 277 |||||||||||||||||||| Sbjct: 210 ggcggcggctgctgcggcgg 191
>dbj|AP005918.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0419H09 Length = 143533 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 258 ggcggcggctgctgcggcgg 277 |||||||||||||||||||| Sbjct: 78263 ggcggcggctgctgcggcgg 78244
>dbj|AP004565.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0486F07 Length = 154926 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 542 cgccgctggccgccgggcac 561 |||||||||||||||||||| Sbjct: 5742 cgccgctggccgccgggcac 5761
>dbj|AK120888.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023029D13, full insert sequence Length = 1352 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 258 ggcggcggctgctgcggcgg 277 |||||||||||||||||||| Sbjct: 273 ggcggcggctgctgcggcgg 292
>dbj|AP004158.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1118_F05 Length = 134247 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 257 aggcggcggctgctgcggcggagc 280 ||||||||||||| |||||||||| Sbjct: 60731 aggcggcggctgcggcggcggagc 60708
>dbj|AK025556.1| Homo sapiens cDNA: FLJ21903 fis, clone HEP03579 Length = 2155 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 258 ggcggcggctgctgcggcgg 277 |||||||||||||||||||| Sbjct: 25 ggcggcggctgctgcggcgg 6
>dbj|AK109610.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-137-G02, full insert sequence Length = 1936 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 ctccctcgcctcctcccgct 79 |||||||||||||||||||| Sbjct: 536 ctccctcgcctcctcccgct 517
>dbj|AK106289.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-101-B01, full insert sequence Length = 1768 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 542 cgccgctggccgccgggcac 561 |||||||||||||||||||| Sbjct: 241 cgccgctggccgccgggcac 260
>gb|AF157006.1|AF157006 Mus musculus tight junction-associtated protein ZO-3 mRNA, complete cds Length = 2974 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 aggcggcggctgctgcggcg 276 |||||||||||||||||||| Sbjct: 2347 aggcggcggctgctgcggcg 2328
>dbj|AK106084.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-B01, full insert sequence Length = 1525 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 35 acgccgagatgcagcgcgcggcgg 58 |||||||| ||||||||||||||| Sbjct: 794 acgccgagctgcagcgcgcggcgg 817
>dbj|AK099384.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033076F23, full insert sequence Length = 4575 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 258 ggcggcggctgctgcggcgg 277 |||||||||||||||||||| Sbjct: 126 ggcggcggctgctgcggcgg 107
>dbj|AK099251.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013154O11, full insert sequence Length = 1517 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 35 acgccgagatgcagcgcgcggcgg 58 |||||||| ||||||||||||||| Sbjct: 794 acgccgagctgcagcgcgcggcgg 817
>dbj|AK073491.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033042N14, full insert sequence Length = 1229 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 257 aggcggcggctgctgcggcggagc 280 ||||||||||||| |||||||||| Sbjct: 171 aggcggcggctgcggcggcggagc 194
>dbj|AK071328.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023087C24, full insert sequence Length = 1175 Score = 40.1 bits (20), Expect = 8.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 249 gacggcaaaggcggcggctgctgcggcggagc 280 |||||| ||||||||||| || |||||||||| Sbjct: 186 gacggcgaaggcggcggcggcggcggcggagc 217
>dbj|AK070124.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023045C15, full insert sequence Length = 2312 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 378 cttcaacatctacaacaagcaggt 401 ||||||||||||||||||| |||| Sbjct: 580 cttcaacatctacaacaagaaggt 603
>gb|BC062377.1| Mus musculus cold shock domain protein A, mRNA (cDNA clone MGC:68100 IMAGE:6530404), complete cds Length = 1684 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 540 cgcgccgctggccgccgggc 559 |||||||||||||||||||| Sbjct: 300 cgcgccgctggccgccgggc 281
>dbj|AK067794.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116E07, full insert sequence Length = 4614 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 258 ggcggcggctgctgcggcgg 277 |||||||||||||||||||| Sbjct: 126 ggcggcggctgctgcggcgg 107
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 301 gtggccgcgggcggcggcat 320 |||||||||||||||||||| Sbjct: 643428 gtggccgcgggcggcggcat 643409
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 314 gcggcattgccggcacggtg 333 |||||||||||||||||||| Sbjct: 1319166 gcggcattgccggcacggtg 1319185 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 39 cgagatgcagcgcgcggcggcctc 62 ||||| |||||||||||||||||| Sbjct: 500545 cgagaagcagcgcgcggcggcctc 500522
>gb|BC048242.1| Mus musculus cold shock domain protein A, mRNA (cDNA clone MGC:54516 IMAGE:6493766), complete cds Length = 1864 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 540 cgcgccgctggccgccgggc 559 |||||||||||||||||||| Sbjct: 300 cgcgccgctggccgccgggc 281
>dbj|AK061602.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-G06, full insert sequence Length = 924 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 93 ggcgtgcacctccaccacctcgcg 116 ||||| |||||||||||||||||| Sbjct: 107 ggcgtccacctccaccacctcgcg 84
>dbj|AK060681.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-D12, full insert sequence Length = 1645 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 60 ctccctcgcctcctcccgct 79 |||||||||||||||||||| Sbjct: 824 ctccctcgcctcctcccgct 843
>dbj|AK060243.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-003-G01, full insert sequence Length = 1558 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 35 acgccgagatgcagcgcgcggcgg 58 |||||||| ||||||||||||||| Sbjct: 794 acgccgagctgcagcgcgcggcgg 817
>gb|AC005882.1|AC005882 Arabidopsis thaliana chromosome I BAC T13M11 genomic sequence, complete sequence Length = 87394 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 378 cttcaacatctacaacaagcaggtcctc 405 ||||||||||||||||||| | |||||| Sbjct: 76751 cttcaacatctacaacaagaaagtcctc 76778
>gb|AE003507.3| Drosophila melanogaster chromosome X, section 59 of 74 of the complete sequence Length = 299804 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 252 ggcaaaggcggcggctgctg 271 |||||||||||||||||||| Sbjct: 194671 ggcaaaggcggcggctgctg 194652
>gb|AE003602.4| Drosophila melanogaster chromosome 3R, section 6 of 118 of the complete sequence Length = 326091 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 557 ggcacatgctgggcacggtg 576 |||||||||||||||||||| Sbjct: 131165 ggcacatgctgggcacggtg 131184
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 gctcagcggccgcctgggcg 96 |||||||||||||||||||| Sbjct: 4042317 gctcagcggccgcctgggcg 4042336
>dbj|D28557.1|RATRYBA Rattus norvegicus RYB-a mRNA, complete cds Length = 1500 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 540 cgcgccgctggccgccgggc 559 |||||||||||||||||||| Sbjct: 167 cgcgccgctggccgccgggc 148
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 93 ggcgtgcacctccaccacctcgcg 116 ||||| |||||||||||||||||| Sbjct: 12562869 ggcgtccacctccaccacctcgcg 12562892
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 8.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 249 gacggcaaaggcggcggctgctgcggcggagc 280 |||||| ||||||||||| || |||||||||| Sbjct: 22051711 gacggcgaaggcggcggcggcggcggcggagc 22051742
>gb|AC004392.1|F8K4 Arabidopsis thaliana chromosome 1 BAC F8K4 sequence, complete sequence Length = 115641 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 378 cttcaacatctacaacaagcaggtcctc 405 ||||||||||||||||||| | |||||| Sbjct: 1797 cttcaacatctacaacaagaaagtcctc 1824
>emb|AL731742.3|CNS08C7R Oryza sativa chromosome 12, . BAC OJ1123_B09 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 155585 Score = 40.1 bits (20), Expect = 8.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 249 gacggcaaaggcggcggctgctgcggcggagc 280 |||||| ||||||||||| || |||||||||| Sbjct: 129644 gacggcgaaggcggcggcggcggcggcggagc 129613
>gb|BC048009.1| Homo sapiens cDNA clone IMAGE:5311660 Length = 2210 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 258 ggcggcggctgctgcggcgg 277 |||||||||||||||||||| Sbjct: 58 ggcggcggctgctgcggcgg 39
>gb|BC105778.1| Rattus norvegicus cold shock domain protein A, mRNA (cDNA clone MGC:124554 IMAGE:7932542), complete cds Length = 1900 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 540 cgcgccgctggccgccgggc 559 |||||||||||||||||||| Sbjct: 295 cgcgccgctggccgccgggc 276
>gb|U22893.1|RNU22893 Rattus norvegicus muscle Y-box protein YB2 mRNA, complete cds Length = 1848 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 540 cgcgccgctggccgccgggc 559 |||||||||||||||||||| Sbjct: 303 cgcgccgctggccgccgggc 284
>ref|NM_022818.3| Homo sapiens microtubule-associated protein 1 light chain 3 beta (MAP1LC3B), mRNA Length = 2270 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 258 ggcggcggctgctgcggcgg 277 |||||||||||||||||||| Sbjct: 156 ggcggcggctgctgcggcgg 137
>gb|J00930.1|PSUAFZB winter flounder antifreeze protein mrna Length = 305 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 258 ggcggcggctgctgcggcgg 277 |||||||||||||||||||| Sbjct: 206 ggcggcggctgctgcggcgg 187 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 258 ggcggcggctgctgcggcgg 277 |||||||||||||||||||| Sbjct: 140 ggcggcggctgctgcggcgg 121
>gb|M10148.1|PSUAFP Winter flounder antifreeze protein mRNA, complete cds Length = 331 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 258 ggcggcggctgctgcggcgg 277 |||||||||||||||||||| Sbjct: 194 ggcggcggctgctgcggcgg 175 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 258 ggcggcggctgctgcggcgg 277 |||||||||||||||||||| Sbjct: 161 ggcggcggctgctgcggcgg 142
>gb|L04649.1|MUSPUR Mouse mRNA sequence Length = 1598 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 258 ggcggcggctgctgcggcgg 277 |||||||||||||||||||| Sbjct: 327 ggcggcggctgctgcggcgg 346
>dbj|D14485.1|MUSDBPA Mouse mRNA for dbpA murine homologue, complete cds Length = 1647 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 540 cgcgccgctggccgccgggc 559 |||||||||||||||||||| Sbjct: 300 cgcgccgctggccgccgggc 281
>dbj|AB006360.1| Mus musculus DNA for MUSPUR, partial cds Length = 5615 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 258 ggcggcggctgctgcggcgg 277 |||||||||||||||||||| Sbjct: 2170 ggcggcggctgctgcggcgg 2189
>dbj|AB061819.1| Oryza sativa (japonica cultivar-group) HOS66 mRNA for KNOX family class 2 homeodomain protein, complete cds Length = 1493 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 258 ggcggcggctgctgcggcgg 277 |||||||||||||||||||| Sbjct: 287 ggcggcggctgctgcggcgg 306 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,251,142 Number of Sequences: 3902068 Number of extensions: 4251142 Number of successful extensions: 134974 Number of sequences better than 10.0: 226 Number of HSP's better than 10.0 without gapping: 236 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 130174 Number of HSP's gapped (non-prelim): 4800 length of query: 587 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 564 effective length of database: 17,143,297,704 effective search space: 9668819905056 effective search space used: 9668819905056 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
