ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart45a11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_479571.1| Oryza sativa (japonica cultivar-group), mRNA 96 2e-17
2gb|BT016442.1| Zea mays clone Contig275 mRNA sequence 96 2e-17
3gb|BT018000.1| Zea mays clone EL01N0526G03.c mRNA sequence 96 2e-17
4dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 96 2e-17
5dbj|AP005167.4| Oryza sativa (japonica cultivar-group) genomic D... 96 2e-17
6emb|Y08987.1|OSR40G2 O.sativa osr40g2 gene 96 2e-17
7dbj|AK103324.1| Oryza sativa (japonica cultivar-group) cDNA clon... 96 2e-17
8gb|BT017376.1| Zea mays clone EL01N0325G07.c mRNA sequence 56 2e-05
9ref|XM_479572.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.018
10dbj|AK060899.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.018
11gb|AY291460.1| Shuttle vector pNG168, complete sequence 44 0.072
12gb|L26978.1|HLFINSVECB Shuttle vector pMLH3, complete sequence 44 0.072
13gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, c... 44 0.072
14gb|M83531.1|HLFHMGA H.volcanii 3-hydroxy-3-methylglutaryl coenzy... 44 0.072
15emb|AL939108.1|SCO939108 Streptomyces coelicolor A3(2) complete ... 42 0.28
16gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 42 0.28
17gb|AY724720.1| Mycobacterium mucogenicum strain ATCC 49650 prepr... 42 0.28
18gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome 40 1.1
19ref|NM_187532.1| Oryza sativa (japonica cultivar-group), predic... 40 1.1
20gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 1.1
21gb|AF459424.1| Rhodococcus sp. NCIMB 9784 flavin-type hydroxylas... 40 1.1
22dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 1.1
23dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 40 1.1
24emb|X95402.1|OSOSR40C1 O.sativa mRNA for novel protein, osr40c1 40 1.1
25dbj|AK069815.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 1.1
26gb|AC126222.2| Oryza sativa (japonica cultivar-group) chromosome... 40 1.1
27gb|AC094571.8| Rattus norvegicus 20 BAC CH230-4L21 (Children's H... 38 4.4
28gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete ge... 38 4.4
29gb|AF291909.2| Metarhizium anisopliae recQ family helicase (TAH1... 38 4.4
30gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome 38 4.4
31gb|AC145491.1| Genomic sequence for Oryza sativa, Nipponbare str... 38 4.4
32gb|AC184714.1| Macaca mulatta clone CH250-396P23 map human ortho... 38 4.4
33gb|AC184713.1| Macaca mulatta clone CH250-569D9 map human orthol... 38 4.4
34gb|AC184712.1| Macaca mulatta clone CH250-14G4 map human ortholo... 38 4.4
35gb|AC184711.1| Macaca mulatta clone CH250-63N16 map human orthol... 38 4.4
36emb|AL939128.1|SCO939128 Streptomyces coelicolor A3(2) complete ... 38 4.4
37emb|AL939104.1|SCO939104 Streptomyces coelicolor A3(2) complete ... 38 4.4
38gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome 38 4.4
39dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 38 4.4
40dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 38 4.4
41gb|AC134230.2| Oryza sativa (japonica cultivar-group) chromosome... 38 4.4
42dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 38 4.4
43dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 38 4.4
44dbj|AP005461.2| Oryza sativa (japonica cultivar-group) genomic D... 38 4.4
45dbj|AP004995.3| Oryza sativa (japonica cultivar-group) genomic D... 38 4.4
46dbj|AP004994.2| Oryza sativa (japonica cultivar-group) genomic D... 38 4.4
47dbj|AP004236.3| Oryza sativa (japonica cultivar-group) genomic D... 38 4.4
48gb|AE005083.1| Halobacterium sp. NRC-1 section 114 of 170 of the... 38 4.4
49dbj|AB004563.1| Terrabacter sp. dbfB, dbfC and orfL(3, 4, 5 and ... 38 4.4
50dbj|AK120551.1| Oryza sativa (japonica cultivar-group) cDNA clon... 38 4.4
51dbj|AK069376.1| Oryza sativa (japonica cultivar-group) cDNA clon... 38 4.4
52gb|AY781800.1| Nocardia farcinica strain ATCC 3318 SecA1 gene, p... 38 4.4
53gb|AY724712.1| Mycobacterium fortuitum strain ATCC 6841 preprote... 38 4.4
54gb|AY724706.1| Mycobacterium celatum strain ATCC 51131 preprotei... 38 4.4
55emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,comp... 38 4.4
56dbj|AK061037.1| Oryza sativa (japonica cultivar-group) cDNA clon... 38 4.4
57emb|Y13918.1|PABY13918 Pseudomonas aeruginosa phage phi CTX DNA,... 38 4.4
58gb|AE015451.1| Pseudomonas putida KT2440 complete genome 38 4.4
59gb|U78289.1|SFU78289 Streptomyces fradiae tylactone synthase, st... 38 4.4
60dbj|D37878.1|STMBCPE Streptomyces hygroscopicus bcpE gene for ca... 38 4.4
61dbj|AB008550.1| Pseudomonas aeruginosa phage phi CTX, complete g... 38 4.4 
>ref|XM_479571.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1511

 Score = 95.6 bits (48), Expect = 2e-17
 Identities = 78/88 (88%)
 Strand = Plus / Plus

                                                                       
Query: 13  aaccagatcttcaagatctactgccgggcctccgaggactactgcctcgccgtccgcgac 72
           ||||||||||||||||||| |||||| |||  |||| ||||||||||| |||||||||||
Sbjct: 135 aaccagatcttcaagatcttctgccgcgccaacgagaactactgcctcaccgtccgcgac 194

                                       
Query: 73  ggcgaggtcgtgctcgcccccgtcaacc 100
            |||  ||||| ||||||||||||||||
Sbjct: 195 agcgccgtcgtcctcgcccccgtcaacc 222



 Score = 46.1 bits (23), Expect = 0.018
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 45  cgaggactactgcctcgccgtccgcgacggc 75
           |||||||||||||||| |||||||| |||||
Sbjct: 686 cgaggactactgcctcaccgtccgcaacggc 716
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>gb|BT016442.1| Zea mays clone Contig275 mRNA sequence
          Length = 1443

 Score = 95.6 bits (48), Expect = 2e-17
 Identities = 87/100 (87%)
 Strand = Plus / Plus

                                                                       
Query: 1   gcgtccggccccaaccagatcttcaagatctactgccgggcctccgaggactactgcctc 60
           ||||| |||||||||||| | |||||||||| |||||| |||  |||| |||||||||| 
Sbjct: 101 gcgtcgggccccaaccaggtgttcaagatcttctgccgcgccaacgagaactactgcctg 160

                                                   
Query: 61  gccgtccgcgacggcgaggtcgtgctcgcccccgtcaacc 100
           ||||||||||||||||  |||||||| ||||| |||||||
Sbjct: 161 gccgtccgcgacggcgccgtcgtgctggccccggtcaacc 200
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>gb|BT018000.1| Zea mays clone EL01N0526G03.c mRNA sequence
          Length = 842

 Score = 95.6 bits (48), Expect = 2e-17
 Identities = 87/100 (87%)
 Strand = Plus / Plus

                                                                       
Query: 1   gcgtccggccccaaccagatcttcaagatctactgccgggcctccgaggactactgcctc 60
           ||||| |||||||||||| | |||||||||| |||||| |||  |||| |||||||||| 
Sbjct: 33  gcgtcgggccccaaccaggtgttcaagatcttctgccgcgccaacgagaactactgcctg 92

                                                   
Query: 61  gccgtccgcgacggcgaggtcgtgctcgcccccgtcaacc 100
           ||||||||||||||||  |||||||| ||||| |||||||
Sbjct: 93  gccgtccgcgacggcgccgtcgtgctggccccggtcaacc 132
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 95.6 bits (48), Expect = 2e-17
 Identities = 78/88 (88%)
 Strand = Plus / Plus

                                                                            
Query: 13       aaccagatcttcaagatctactgccgggcctccgaggactactgcctcgccgtccgcgac 72
                ||||||||||||||||||| |||||| |||  |||| ||||||||||| |||||||||||
Sbjct: 28950772 aaccagatcttcaagatcttctgccgcgccaacgagaactactgcctcaccgtccgcgac 28950831

                                            
Query: 73       ggcgaggtcgtgctcgcccccgtcaacc 100
                 |||  ||||| ||||||||||||||||
Sbjct: 28950832 agcgccgtcgtcctcgcccccgtcaacc 28950859



 Score = 46.1 bits (23), Expect = 0.018
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                               
Query: 45       cgaggactactgcctcgccgtccgcgacggc 75
                |||||||||||||||| |||||||| |||||
Sbjct: 28951522 cgaggactactgcctcaccgtccgcaacggc 28951552
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>dbj|AP005167.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBa0060O17
          Length = 180015

 Score = 95.6 bits (48), Expect = 2e-17
 Identities = 78/88 (88%)
 Strand = Plus / Plus

                                                                         
Query: 13    aaccagatcttcaagatctactgccgggcctccgaggactactgcctcgccgtccgcgac 72
             ||||||||||||||||||| |||||| |||  |||| ||||||||||| |||||||||||
Sbjct: 68309 aaccagatcttcaagatcttctgccgcgccaacgagaactactgcctcaccgtccgcgac 68368

                                         
Query: 73    ggcgaggtcgtgctcgcccccgtcaacc 100
              |||  ||||| ||||||||||||||||
Sbjct: 68369 agcgccgtcgtcctcgcccccgtcaacc 68396



 Score = 46.1 bits (23), Expect = 0.018
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                            
Query: 45    cgaggactactgcctcgccgtccgcgacggc 75
             |||||||||||||||| |||||||| |||||
Sbjct: 69059 cgaggactactgcctcaccgtccgcaacggc 69089
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>emb|Y08987.1|OSR40G2 O.sativa osr40g2 gene
          Length = 2101

 Score = 95.6 bits (48), Expect = 2e-17
 Identities = 78/88 (88%)
 Strand = Plus / Plus

                                                                       
Query: 13  aaccagatcttcaagatctactgccgggcctccgaggactactgcctcgccgtccgcgac 72
           ||||||||||||||||||| |||||| |||  |||| ||||||||||| |||||||||||
Sbjct: 699 aaccagatcttcaagatcttctgccgcgccaacgagaactactgcctcaccgtccgcgac 758

                                       
Query: 73  ggcgaggtcgtgctcgcccccgtcaacc 100
            |||  ||||| ||||||||||||||||
Sbjct: 759 agcgccgtcgtcctcgcccccgtcaacc 786



 Score = 46.1 bits (23), Expect = 0.018
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                           
Query: 45   cgaggactactgcctcgccgtccgcgacggc 75
            |||||||||||||||| |||||||| |||||
Sbjct: 1449 cgaggactactgcctcaccgtccgcaacggc 1479
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>dbj|AK103324.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033125K07, full
           insert sequence
          Length = 1512

 Score = 95.6 bits (48), Expect = 2e-17
 Identities = 78/88 (88%)
 Strand = Plus / Plus

                                                                       
Query: 13  aaccagatcttcaagatctactgccgggcctccgaggactactgcctcgccgtccgcgac 72
           ||||||||||||||||||| |||||| |||  |||| ||||||||||| |||||||||||
Sbjct: 135 aaccagatcttcaagatcttctgccgcgccaacgagaactactgcctcaccgtccgcgac 194

                                       
Query: 73  ggcgaggtcgtgctcgcccccgtcaacc 100
            |||  ||||| ||||||||||||||||
Sbjct: 195 agcgccgtcgtcctcgcccccgtcaacc 222



 Score = 46.1 bits (23), Expect = 0.018
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 45  cgaggactactgcctcgccgtccgcgacggc 75
           |||||||||||||||| |||||||| |||||
Sbjct: 686 cgaggactactgcctcaccgtccgcaacggc 716
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>gb|BT017376.1| Zea mays clone EL01N0325G07.c mRNA sequence
          Length = 778

 Score = 56.0 bits (28), Expect = 2e-05
 Identities = 67/80 (83%)
 Strand = Plus / Plus

                                                                       
Query: 21  cttcaagatctactgccgggcctccgaggactactgcctcgccgtccgcgacggcgaggt 80
           ||||||||||| ||||  ||||  |||||  ||||||||| |||||||||||||| | ||
Sbjct: 151 cttcaagatcttctgcaaggccgacgaggggtactgcctcaccgtccgcgacggcaacgt 210

                               
Query: 81  cgtgctcgcccccgtcaacc 100
            ||||| ||||||| |||||
Sbjct: 211 ggtgctggcccccgccaacc 230
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>ref|XM_479572.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1239

 Score = 46.1 bits (23), Expect = 0.018
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 45  cgaggactactgcctcgccgtccgcgacggc 75
           |||||||||||||||| |||||||| |||||
Sbjct: 471 cgaggactactgcctcaccgtccgcaacggc 501
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>dbj|AK060899.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-D04, full
           insert sequence
          Length = 1239

 Score = 46.1 bits (23), Expect = 0.018
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 45  cgaggactactgcctcgccgtccgcgacggc 75
           |||||||||||||||| |||||||| |||||
Sbjct: 471 cgaggactactgcctcaccgtccgcaacggc 501
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>gb|AY291460.1| Shuttle vector pNG168, complete sequence
          Length = 8960

 Score = 44.1 bits (22), Expect = 0.072
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 62   ccgtccgcgacggcgaggtcgt 83
            ||||||||||||||||||||||
Sbjct: 8868 ccgtccgcgacggcgaggtcgt 8889
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>gb|L26978.1|HLFINSVECB Shuttle vector pMLH3, complete sequence
          Length = 11291

 Score = 44.1 bits (22), Expect = 0.072
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 62   ccgtccgcgacggcgaggtcgt 83
            ||||||||||||||||||||||
Sbjct: 8675 ccgtccgcgacggcgaggtcgt 8696
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>gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence
          Length = 3131724

 Score = 44.1 bits (22), Expect = 0.072
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 69      cgacggcgaggtcgtgctcgcc 90
               ||||||||||||||||||||||
Sbjct: 2232615 cgacggcgaggtcgtgctcgcc 2232636



 Score = 38.2 bits (19), Expect = 4.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 72      cggcgaggtcgtgctcgcc 90
               |||||||||||||||||||
Sbjct: 2984198 cggcgaggtcgtgctcgcc 2984216



 Score = 38.2 bits (19), Expect = 4.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 65     tccgcgacggcgaggtcgt 83
              |||||||||||||||||||
Sbjct: 524067 tccgcgacggcgaggtcgt 524085
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>gb|M83531.1|HLFHMGA H.volcanii 3-hydroxy-3-methylglutaryl coenzyme A reductase (hmg)
           gene, complete cds
          Length = 1890

 Score = 44.1 bits (22), Expect = 0.072
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 62  ccgtccgcgacggcgaggtcgt 83
           ||||||||||||||||||||||
Sbjct: 310 ccgtccgcgacggcgaggtcgt 289
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>emb|AL939108.1|SCO939108 Streptomyces coelicolor A3(2) complete genome; segment 5/29
          Length = 339650

 Score = 42.1 bits (21), Expect = 0.28
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 56     gcctcgccgtccgcgacggcgaggt 80
              ||||||||||||||| |||||||||
Sbjct: 164567 gcctcgccgtccgcgtcggcgaggt 164543
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>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 42.1 bits (21), Expect = 0.28
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 66      ccgcgacggcgaggtcgtgctcgcc 90
               |||||||||||| ||||||||||||
Sbjct: 5220909 ccgcgacggcgacgtcgtgctcgcc 5220933



 Score = 38.2 bits (19), Expect = 4.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 63      cgtccgcgacggcgaggtc 81
               |||||||||||||||||||
Sbjct: 3453949 cgtccgcgacggcgaggtc 3453931
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>gb|AY724720.1| Mycobacterium mucogenicum strain ATCC 49650 preprotein translocase
           SecA1 (secA1) gene, partial cds
          Length = 700

 Score = 42.1 bits (21), Expect = 0.28
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 63  cgtccgcgacggcgaggtcgt 83
           |||||||||||||||||||||
Sbjct: 484 cgtccgcgacggcgaggtcgt 504
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>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome
          Length = 4109442

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 67    cgcgacggcgaggtcgtgct 86
             ||||||||||||||||||||
Sbjct: 58762 cgcgacggcgaggtcgtgct 58743
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>ref|NM_187532.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1122

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 59/72 (81%)
 Strand = Plus / Plus

                                                                       
Query: 21  cttcaagatctactgccgggcctccgaggactactgcctcgccgtccgcgacggcgaggt 80
           ||||||||||| |||||| |||  |||||  |||||| ||||||| ||||| ||  | ||
Sbjct: 90  cttcaagatcttctgccgcgccgacgaggggtactgcgtcgccgtgcgcgaggggaacgt 149

                       
Query: 81  cgtgctcgcccc 92
           ||| ||||||||
Sbjct: 150 cgtcctcgcccc 161
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 59/72 (81%)
 Strand = Plus / Minus

                                                                            
Query: 21       cttcaagatctactgccgggcctccgaggactactgcctcgccgtccgcgacggcgaggt 80
                ||||||||||| |||||| |||  |||||  |||||| ||||||| ||||| ||  | ||
Sbjct: 11932527 cttcaagatcttctgccgcgccgacgaggggtactgcgtcgccgtgcgcgaggggaacgt 11932468

                            
Query: 81       cgtgctcgcccc 92
                ||| ||||||||
Sbjct: 11932467 cgtcctcgcccc 11932456



 Score = 38.2 bits (19), Expect = 4.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 64       gtccgcgacggcgaggtcg 82
                |||||||||||||||||||
Sbjct: 11299750 gtccgcgacggcgaggtcg 11299768
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>gb|AF459424.1| Rhodococcus sp. NCIMB 9784 flavin-type hydroxylase and cytochrome
            P450 RhF (P450RhF) genes, complete cds
          Length = 4411

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 59   tcgccgtccgcgacggcgaggtcg 82
            ||||||||| ||||||||||||||
Sbjct: 3948 tcgccgtcctcgacggcgaggtcg 3971
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 59/72 (81%)
 Strand = Plus / Minus

                                                                            
Query: 21       cttcaagatctactgccgggcctccgaggactactgcctcgccgtccgcgacggcgaggt 80
                ||||||||||| |||||| |||  |||||  |||||| ||||||| ||||| ||  | ||
Sbjct: 11929290 cttcaagatcttctgccgcgccgacgaggggtactgcgtcgccgtgcgcgaggggaacgt 11929231

                            
Query: 81       cgtgctcgcccc 92
                ||| ||||||||
Sbjct: 11929230 cgtcctcgcccc 11929219



 Score = 38.2 bits (19), Expect = 4.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 64       gtccgcgacggcgaggtcg 82
                |||||||||||||||||||
Sbjct: 11296513 gtccgcgacggcgaggtcg 11296531
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>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 69     cgacggcgaggtcgtgctcg 88
              ||||||||||||||||||||
Sbjct: 740437 cgacggcgaggtcgtgctcg 740456



 Score = 38.2 bits (19), Expect = 4.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 66     ccgcgacggcgaggtcgtg 84
              |||||||||||||||||||
Sbjct: 838502 ccgcgacggcgaggtcgtg 838484
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>emb|X95402.1|OSOSR40C1 O.sativa mRNA for novel protein, osr40c1
          Length = 1458

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 59/72 (81%)
 Strand = Plus / Plus

                                                                       
Query: 21  cttcaagatctactgccgggcctccgaggactactgcctcgccgtccgcgacggcgaggt 80
           ||||||||||| |||||| |||  |||||  |||||| ||||||| ||||| ||  | ||
Sbjct: 152 cttcaagatcttctgccgcgccgacgaggggtactgcgtcgccgtgcgcgaggggaacgt 211

                       
Query: 81  cgtgctcgcccc 92
           ||| ||||||||
Sbjct: 212 cgtcctcgcccc 223
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>dbj|AK069815.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023031K10, full
           insert sequence
          Length = 1765

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 59/72 (81%)
 Strand = Plus / Plus

                                                                       
Query: 21  cttcaagatctactgccgggcctccgaggactactgcctcgccgtccgcgacggcgaggt 80
           ||||||||||| |||||| |||  |||||  |||||| ||||||| ||||| ||  | ||
Sbjct: 165 cttcaagatcttctgccgcgccgacgaggggtactgcgtcgccgtgcgcgaggggaacgt 224

                       
Query: 81  cgtgctcgcccc 92
           ||| ||||||||
Sbjct: 225 cgtcctcgcccc 236
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>gb|AC126222.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBb0014I10, complete sequence
          Length = 113946

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 59/72 (81%)
 Strand = Plus / Minus

                                                                         
Query: 21    cttcaagatctactgccgggcctccgaggactactgcctcgccgtccgcgacggcgaggt 80
             ||||||||||| |||||| |||  |||||  |||||| ||||||| ||||| ||  | ||
Sbjct: 33789 cttcaagatcttctgccgcgccgacgaggggtactgcgtcgccgtgcgcgaggggaacgt 33730

                         
Query: 81    cgtgctcgcccc 92
             ||| ||||||||
Sbjct: 33729 cgtcctcgcccc 33718
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>gb|AC094571.8| Rattus norvegicus 20 BAC CH230-4L21 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 230137

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 4      tccggccccaaccagatct 22
              |||||||||||||||||||
Sbjct: 133790 tccggccccaaccagatct 133808
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>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome
          Length = 3696649

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 52      tactgcctcgccgtccgcg 70
               |||||||||||||||||||
Sbjct: 1107555 tactgcctcgccgtccgcg 1107537



 Score = 38.2 bits (19), Expect = 4.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 12    caaccagatcttcaagatc 30
             |||||||||||||||||||
Sbjct: 41903 caaccagatcttcaagatc 41921
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>gb|AF291909.2| Metarhizium anisopliae recQ family helicase (TAH1) gene, complete cds
          Length = 8149

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 70   gacggcgaggtcgtgctcg 88
            |||||||||||||||||||
Sbjct: 2858 gacggcgaggtcgtgctcg 2876
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>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome
          Length = 3402093

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 67    cgcgacggcgaggtcgtgc 85
             |||||||||||||||||||
Sbjct: 28568 cgcgacggcgaggtcgtgc 28586
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>gb|AC145491.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNAb0085H08, from chromosome 3, complete sequence
          Length = 130656

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 64    gtccgcgacggcgaggtcg 82
             |||||||||||||||||||
Sbjct: 78703 gtccgcgacggcgaggtcg 78721
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>gb|AC184714.1| Macaca mulatta clone CH250-396P23 map human ortholog 8p23.1, complete
             sequence
          Length = 174987

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                        
Query: 9     ccccaaccagatcttcaagatctactg 35
             |||||||||| || |||||||||||||
Sbjct: 72553 ccccaaccagctcatcaagatctactg 72579
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>gb|AC184713.1| Macaca mulatta clone CH250-569D9 map human ortholog 8p23.1, complete
             sequence
          Length = 153308

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                        
Query: 9     ccccaaccagatcttcaagatctactg 35
             |||||||||| || |||||||||||||
Sbjct: 57986 ccccaaccagctcatcaagatctactg 58012
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>gb|AC184712.1| Macaca mulatta clone CH250-14G4 map human ortholog 8p23.1, complete
             sequence
          Length = 190509

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                        
Query: 9     ccccaaccagatcttcaagatctactg 35
             |||||||||| || |||||||||||||
Sbjct: 90797 ccccaaccagctcatcaagatctactg 90823
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>gb|AC184711.1| Macaca mulatta clone CH250-63N16 map human ortholog 8p23.1, complete
              sequence
          Length = 200536

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                         
Query: 9      ccccaaccagatcttcaagatctactg 35
              |||||||||| || |||||||||||||
Sbjct: 105303 ccccaaccagctcatcaagatctactg 105329
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>emb|AL939128.1|SCO939128 Streptomyces coelicolor A3(2) complete genome; segment 25/29
          Length = 296500

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 65    tccgcgacggcgaggtcgt 83
             |||||||||||||||||||
Sbjct: 27308 tccgcgacggcgaggtcgt 27326
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>emb|AL939104.1|SCO939104 Streptomyces coelicolor A3(2) complete genome; segment 1/29
          Length = 299050

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 57     cctcgccgtccgcgacggc 75
              |||||||||||||||||||
Sbjct: 235130 cctcgccgtccgcgacggc 235148
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>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome
          Length = 7074893

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 12      caaccagatcttcaagatc 30
               |||||||||||||||||||
Sbjct: 3089274 caaccagatcttcaagatc 3089256
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>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 66      ccgcgacggcgaggtcgtg 84
               |||||||||||||||||||
Sbjct: 1797990 ccgcgacggcgaggtcgtg 1798008
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                       
Query: 54       ctgcctcgccgtccgcgacggcg 76
                ||||||||||||||||| |||||
Sbjct: 23118884 ctgcctcgccgtccgcggcggcg 23118906



 Score = 38.2 bits (19), Expect = 4.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 62       ccgtccgcgacggcgaggt 80
                |||||||||||||||||||
Sbjct: 22002223 ccgtccgcgacggcgaggt 22002205



 Score = 38.2 bits (19), Expect = 4.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 55      tgcctcgccgtccgcgacg 73
               |||||||||||||||||||
Sbjct: 7183188 tgcctcgccgtccgcgacg 7183170
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>gb|AC134230.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
            OSJNBa0005J15, complete sequence
          Length = 159270

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 64   gtccgcgacggcgaggtcg 82
            |||||||||||||||||||
Sbjct: 8047 gtccgcgacggcgaggtcg 8065
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 65      tccgcgacggcgaggtcgt 83
               |||||||||||||||||||
Sbjct: 2309465 tccgcgacggcgaggtcgt 2309447
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 63      cgtccgcgacggcgaggtc 81
               |||||||||||||||||||
Sbjct: 4784585 cgtccgcgacggcgaggtc 4784567



 Score = 38.2 bits (19), Expect = 4.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 69     cgacggcgaggtcgtgctc 87
              |||||||||||||||||||
Sbjct: 395830 cgacggcgaggtcgtgctc 395812
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>dbj|AP005461.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0612G07
          Length = 182548

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 62    ccgtccgcgacggcgaggt 80
             |||||||||||||||||||
Sbjct: 40096 ccgtccgcgacggcgaggt 40078
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>dbj|AP004995.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0068B06
          Length = 143712

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 55    tgcctcgccgtccgcgacg 73
             |||||||||||||||||||
Sbjct: 60599 tgcctcgccgtccgcgacg 60581
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>dbj|AP004994.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0052G07
          Length = 156207

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 55    tgcctcgccgtccgcgacg 73
             |||||||||||||||||||
Sbjct: 18192 tgcctcgccgtccgcgacg 18174
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>dbj|AP004236.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0417D05
          Length = 165752

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 54    ctgcctcgccgtccgcgacggcg 76
             ||||||||||||||||| |||||
Sbjct: 69532 ctgcctcgccgtccgcggcggcg 69554
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>gb|AE005083.1| Halobacterium sp. NRC-1 section 114 of 170 of the complete genome
          Length = 10354

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                       
Query: 60   cgccgtccgcgacggcgaggtcgtgct 86
            ||||||| |||||||||||| ||||||
Sbjct: 5376 cgccgtcagcgacggcgaggacgtgct 5402
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>dbj|AB004563.1| Terrabacter sp. dbfB, dbfC and orfL(3, 4, 5 and 6) genes involved in
            the degradation of dibenzofuran, complete cds
          Length = 8599

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 73   ggcgaggtcgtgctcgccc 91
            |||||||||||||||||||
Sbjct: 5699 ggcgaggtcgtgctcgccc 5717
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>dbj|AK120551.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013130B13, full
            insert sequence
          Length = 1645

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 64   gtccgcgacggcgaggtcg 82
            |||||||||||||||||||
Sbjct: 1113 gtccgcgacggcgaggtcg 1095
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>dbj|AK069376.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023012K19, full
           insert sequence
          Length = 1230

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 54  ctgcctcgccgtccgcgacggcg 76
           ||||||||||||||||| |||||
Sbjct: 480 ctgcctcgccgtccgcggcggcg 502
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>gb|AY781800.1| Nocardia farcinica strain ATCC 3318 SecA1 gene, partial cds
          Length = 700

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 63  cgtccgcgacggcgaggtc 81
           |||||||||||||||||||
Sbjct: 484 cgtccgcgacggcgaggtc 502
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>gb|AY724712.1| Mycobacterium fortuitum strain ATCC 6841 preprotein translocase
           SecA1 (secA1) gene, partial cds
          Length = 700

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 63  cgtccgcgacggcgaggtc 81
           |||||||||||||||||||
Sbjct: 484 cgtccgcgacggcgaggtc 502
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>gb|AY724706.1| Mycobacterium celatum strain ATCC 51131 preprotein translocase
           SecA1 (secA1) gene, partial cds
          Length = 700

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 63  cgtccgcgacggcgaggtc 81
           |||||||||||||||||||
Sbjct: 484 cgtccgcgacggcgaggtc 502
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>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence
          Length = 5888780

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 12      caaccagatcttcaagatc 30
               |||||||||||||||||||
Sbjct: 3552943 caaccagatcttcaagatc 3552925
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>dbj|AK061037.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-205-B07, full
           insert sequence
          Length = 1241

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 54  ctgcctcgccgtccgcgacggcg 76
           ||||||||||||||||| |||||
Sbjct: 479 ctgcctcgccgtccgcggcggcg 501
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>emb|Y13918.1|PABY13918 Pseudomonas aeruginosa phage phi CTX DNA, complete genome
          Length = 35559

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 61    gccgtccgcgacggcgaggtcgt 83
             ||||||| |||||||||||||||
Sbjct: 32456 gccgtcctcgacggcgaggtcgt 32434
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>gb|AE015451.1| Pseudomonas putida KT2440 complete genome
          Length = 6181863

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 12      caaccagatcttcaagatc 30
               |||||||||||||||||||
Sbjct: 4116333 caaccagatcttcaagatc 4116315
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>gb|U78289.1|SFU78289 Streptomyces fradiae tylactone synthase, starter module and modules
            1-7, (tylG) gene, complete cds
          Length = 43280

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 57   cctcgccgtccgcgacggcgagg 79
            |||||||| ||||||||||||||
Sbjct: 7304 cctcgccggccgcgacggcgagg 7326
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>dbj|D37878.1|STMBCPE Streptomyces hygroscopicus bcpE gene for carboxyphosphonoenolpyruvate
            synthase, complete cds
          Length = 2095

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 60   cgccgtccgcgacggcgaggtcg 82
            ||||| |||||||||||||||||
Sbjct: 1769 cgccgaccgcgacggcgaggtcg 1747
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>dbj|AB008550.1| Pseudomonas aeruginosa phage phi CTX, complete genome sequence
          Length = 35580

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 61    gccgtccgcgacggcgaggtcgt 83
             ||||||| |||||||||||||||
Sbjct: 32456 gccgtcctcgacggcgaggtcgt 32434


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 588,914
Number of Sequences: 3902068
Number of extensions: 588914
Number of successful extensions: 38057
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 63
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 36836
Number of HSP's gapped (non-prelim): 1221
length of query: 100
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 79
effective length of database: 17,151,101,840
effective search space: 1354937045360
effective search space used: 1354937045360
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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