Clone Information

BLAST Search Result

Clone Name	bart45a06
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	VATE_CITUN (Q9MB46) Vacuolar ATP synthase subunit E (EC 3.6.3.14...	149	2e-36
2	VATE_CITLI (Q9SWE7) Vacuolar ATP synthase subunit E (EC 3.6.3.14...	149	2e-36
3	VATE_ARATH (Q39258) Vacuolar ATP synthase subunit E (EC 3.6.3.14...	146	1e-35
4	VATE_MESCR (Q40272) Vacuolar ATP synthase subunit E (EC 3.6.3.14...	145	2e-35
5	VATE_GOSHI (O23948) Vacuolar ATP synthase subunit E (EC 3.6.3.14...	145	2e-35
6	VATE_SPIOL (Q41396) Vacuolar ATP synthase subunit E (EC 3.6.3.14...	144	6e-35
7	VATE_MANSE (P31402) Vacuolar ATP synthase subunit E (EC 3.6.3.14...	92	3e-19
8	VATE_DROME (P54611) Vacuolar ATP synthase subunit E (EC 3.6.3.14...	92	3e-19
9	VATE_HUMAN (P36543) Vacuolar ATP synthase subunit E (EC 3.6.3.14...	92	4e-19
10	VATE_BOVIN (P11019) Vacuolar ATP synthase subunit E (EC 3.6.3.14...	92	4e-19
11	VATE_HETSC (Q9U1G5) Vacuolar ATP synthase subunit E (EC 3.6.3.14...	90	2e-18
12	VATE_DICDI (O00780) Vacuolar ATP synthase subunit E (EC 3.6.3.14...	81	8e-16
13	VATE_MOUSE (P50518) Vacuolar ATP synthase subunit E (EC 3.6.3.14...	79	4e-15
14	VATE_NEUCR (Q01278) Vacuolar ATP synthase subunit E (EC 3.6.3.14...	68	7e-12
15	VATE_SCHPO (O13687) Vacuolar ATP synthase subunit E (EC 3.6.3.14...	66	2e-11
16	VATE_CANAL (O94072) Vacuolar ATP synthase subunit E (EC 3.6.3.14...	59	2e-09
17	VATE_YEAST (P22203) Vacuolar ATP synthase subunit E (EC 3.6.3.14...	56	3e-08
18	VATE_HALVO (Q48329) V-type ATP synthase subunit E (EC 3.6.3.14) ...	34	0.083
19	SYT_FUSNN (Q8RFS6) Threonyl-tRNA synthetase (EC 6.1.1.3) (Threon...	32	0.41
20	PUMA_PARUN (O61308) 227 kDa spindle- and centromere-associated p...	32	0.54
21	GARP_PLAFF (P13816) Glutamic acid-rich protein precursor	32	0.54
22	PRIL_METBF (Q46E38) Probable DNA primase large subunit (EC 2.7.7.-)	31	0.70
23	MYH8_HUMAN (P13535) Myosin-8 (Myosin heavy chain, skeletal muscl...	30	1.2
24	REN3A_HUMAN (Q9H1J1) Regulator of nonsense transcripts 3A (Nonse...	30	1.6
25	PHF14_HUMAN (O94880) PHD finger protein 14	30	2.0
26	MOES_RAT (O35763) Moesin (Membrane-organizing extension spike pr...	30	2.0
27	MOES_MOUSE (P26041) Moesin (Membrane-organizing extension spike ...	30	2.0
28	Y223_METJA (Q57676) Hypothetical protein MJ0223	30	2.0
29	CCD50_CHICK (Q5ZM86) Coiled-coil domain-containing protein 50	30	2.0
30	AKAP2_HUMAN (Q9Y2D5) A-kinase anchor protein 2 (Protein kinase A...	29	2.7
31	MYH4_HUMAN (Q9Y623) Myosin-4 (Myosin heavy chain, skeletal muscl...	29	2.7
32	PFDB_METJA (Q58394) Prefoldin beta subunit (GimC beta subunit)	29	2.7
33	M49_STRP9 (P16947) M protein, serotype 49 precursor	29	3.5
34	PRP3_YEAST (Q03338) U4/U6 small nuclear ribonucleoprotein PRP3 (...	29	3.5
35	IF2_RALEJ (Q46ZP1) Translation initiation factor IF-2	29	3.5
36	DC1I2_RAT (Q62871) Cytoplasmic dynein 1 intermediate chain 2 (Dy...	29	3.5
37	RAD50_AQUAE (O67124) Probable DNA double-strand break repair rad...	29	3.5
38	DC1I2_MOUSE (O88487) Cytoplasmic dynein 1 intermediate chain 2 (...	29	3.5
39	M3K2_ARATH (Q9FZ36) Mitogen-activated protein kinase kinase kina...	29	3.5
40	PFDB_ARCFU (O29115) Prefoldin beta subunit (GimC beta subunit)	29	3.5
41	REST_CHICK (O42184) Restin (Cytoplasmic linker protein 170) (CLI...	28	4.5
42	MST2_DROHY (Q08696) Axoneme-associated protein mst101(2)	28	4.5
43	MOES_PIG (P26042) Moesin (Membrane-organizing extension spike pr...	28	4.5
44	SSUB_BACSU (P97027) Putative aliphatic sulfonates transport ATP-...	28	4.5
45	SMC4_XENLA (P50532) Structural maintenance of chromosome 4 (Chro...	28	4.5
46	REST_HUMAN (P30622) Restin (Cytoplasmic linker protein 170 alpha...	28	4.5
47	MAP1A_RAT (P34926) Microtubule-associated protein 1A (MAP 1A) [C...	28	4.5
48	ABRA_PLAF7 (Q8I5D2) 101 kDa malaria antigen (p101) (Acidic basic...	28	5.9
49	MOES_HUMAN (P26038) Moesin (Membrane-organizing extension spike ...	28	5.9
50	FYV7_KLULA (Q6CRY6) Protein FYV7	28	5.9
51	TPIS_PLAFA (Q07412) Triosephosphate isomerase (EC 5.3.1.1) (TIM)...	28	5.9
52	TPIS_PLAF7 (Q7KQM0) Triosephosphate isomerase (EC 5.3.1.1) (TIM)...	28	5.9
53	Y1923_AQUAE (O67752) Hypothetical protein aq_1923 precursor	28	5.9
54	POTA_MYCPN (P75059) Spermidine/putrescine import ATP-binding pro...	28	5.9
55	Y2340_ARCFU (O27944) Hypothetical protein AF2340	28	5.9
56	GOGA6_HUMAN (Q9NYA3) Golgin subfamily A member 6 (Golgin linked ...	28	5.9
57	CBPY_PICPA (P52710) Carboxypeptidase Y precursor (EC 3.4.16.5) (...	28	5.9
58	Y3404_METJA (Q60303) Hypothetical protein MJECS04	28	7.8
59	MNN4_YEAST (P36044) Protein MNN4	28	7.8
60	NOP58_YEAST (Q12499) Nucleolar protein NOP58 (Nucleolar protein ...	28	7.8
61	Y3012_CLOPE (Q93MD5) Hypothetical protein PCP12	28	7.8
62	RAD50_SCHPO (Q9UTJ8) DNA repair protein rad50 (EC 3.6.-.-)	28	7.8
63	SSY1_YEAST (Q03770) Putative amino-acid permease SSY1	28	7.8
64	RRF_THET8 (Q9WX76) Ribosome recycling factor (Ribosome-releasing...	28	7.8
65	RRF_THET2 (Q72KE0) Ribosome recycling factor (Ribosome-releasing...	28	7.8
66	UTP9_YEAST (P38882) U3 small nucleolar RNA-associated protein 9 ...	28	7.8
67	DC1I1_RAT (Q63100) Cytoplasmic dynein 1 intermediate chain 1 (Dy...	28	7.8
68	DC1I1_MOUSE (O88485) Cytoplasmic dynein 1 intermediate chain 1 (...	28	7.8
69	MRCKA_RAT (O54874) Serine/threonine-protein kinase MRCK alpha (E...	28	7.8
70	DC1I1_HUMAN (O14576) Cytoplasmic dynein 1 intermediate chain 1 (...	28	7.8

>VATE_CITUN (Q9MB46) Vacuolar ATP synthase subunit E (EC 3.6.3.14) (V-ATPase E|
           subunit) (Vacuolar proton pump E subunit)
          Length = 230

 Score =  149 bits (375), Expect = 2e-36
 Identities = 78/85 (91%), Positives = 81/85 (95%)
 Frame = +1

Query: 43  MNDTDVSRQIQQMVRFIRQEA*EKAGEISVSAEEEFNIEKLQLVEAEKKKITQEYERKEK 222
           MND DVS+QIQQMVRFIRQEA EKA EISVSAEEEFNIEKLQLVEAEKKKI QEYERKEK
Sbjct: 1   MNDADVSKQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYERKEK 60

Query: 223 QVDVRKKIEYSMQLNASRIKVLQAQ 297
           QV++RKKIEYSMQLNASRIKVLQAQ
Sbjct: 61  QVEIRKKIEYSMQLNASRIKVLQAQ 85

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>VATE_CITLI (Q9SWE7) Vacuolar ATP synthase subunit E (EC 3.6.3.14) (V-ATPase E|
           subunit) (Vacuolar proton pump E subunit) (CLVE-1)
          Length = 230

 Score =  149 bits (375), Expect = 2e-36
 Identities = 78/85 (91%), Positives = 81/85 (95%)
 Frame = +1

Query: 43  MNDTDVSRQIQQMVRFIRQEA*EKAGEISVSAEEEFNIEKLQLVEAEKKKITQEYERKEK 222
           MND DVS+QIQQMVRFIRQEA EKA EISVSAEEEFNIEKLQLVEAEKKKI QEYERKEK
Sbjct: 1   MNDADVSKQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYERKEK 60

Query: 223 QVDVRKKIEYSMQLNASRIKVLQAQ 297
           QV++RKKIEYSMQLNASRIKVLQAQ
Sbjct: 61  QVEIRKKIEYSMQLNASRIKVLQAQ 85

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>VATE_ARATH (Q39258) Vacuolar ATP synthase subunit E (EC 3.6.3.14) (V-ATPase E|
           subunit) (Vacuolar proton pump E subunit)
          Length = 230

 Score =  146 bits (368), Expect = 1e-35
 Identities = 77/85 (90%), Positives = 80/85 (94%)
 Frame = +1

Query: 43  MNDTDVSRQIQQMVRFIRQEA*EKAGEISVSAEEEFNIEKLQLVEAEKKKITQEYERKEK 222
           MND DVSRQIQQMVRFIRQEA EKA EISVSAEEEFNIEKLQLVEAEKKKI Q+YE+KEK
Sbjct: 1   MNDGDVSRQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQDYEKKEK 60

Query: 223 QVDVRKKIEYSMQLNASRIKVLQAQ 297
           Q DVRKKI+YSMQLNASRIKVLQAQ
Sbjct: 61  QADVRKKIDYSMQLNASRIKVLQAQ 85

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>VATE_MESCR (Q40272) Vacuolar ATP synthase subunit E (EC 3.6.3.14) (V-ATPase E|
           subunit) (Vacuolar proton pump E subunit)
          Length = 226

 Score =  145 bits (367), Expect = 2e-35
 Identities = 77/85 (90%), Positives = 79/85 (92%)
 Frame = +1

Query: 43  MNDTDVSRQIQQMVRFIRQEA*EKAGEISVSAEEEFNIEKLQLVEAEKKKITQEYERKEK 222
           MNDTDV  QIQQMVRF+RQEA EKA EISVSAEEEFNIEKLQLVEAEKKKI QEYERK K
Sbjct: 1   MNDTDVQNQIQQMVRFMRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYERKAK 60

Query: 223 QVDVRKKIEYSMQLNASRIKVLQAQ 297
           QVDVR+KIEYSMQLNASRIKVLQAQ
Sbjct: 61  QVDVRRKIEYSMQLNASRIKVLQAQ 85

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>VATE_GOSHI (O23948) Vacuolar ATP synthase subunit E (EC 3.6.3.14) (V-ATPase E|
           subunit) (Vacuolar proton pump E subunit)
          Length = 237

 Score =  145 bits (367), Expect = 2e-35
 Identities = 76/85 (89%), Positives = 81/85 (95%)
 Frame = +1

Query: 43  MNDTDVSRQIQQMVRFIRQEA*EKAGEISVSAEEEFNIEKLQLVEAEKKKITQEYERKEK 222
           M+D DVS+QIQQMVRFIRQEA EKA EISVSAEEEFNIEKLQLVEAEKKKI QEYE+KEK
Sbjct: 1   MSDADVSKQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYEKKEK 60

Query: 223 QVDVRKKIEYSMQLNASRIKVLQAQ 297
           QV++RKKIEYSMQLNASRIKVLQAQ
Sbjct: 61  QVEIRKKIEYSMQLNASRIKVLQAQ 85

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>VATE_SPIOL (Q41396) Vacuolar ATP synthase subunit E (EC 3.6.3.14) (V-ATPase E|
           subunit) (Vacuolar proton pump E subunit)
          Length = 229

 Score =  144 bits (363), Expect = 6e-35
 Identities = 76/85 (89%), Positives = 79/85 (92%)
 Frame = +1

Query: 43  MNDTDVSRQIQQMVRFIRQEA*EKAGEISVSAEEEFNIEKLQLVEAEKKKITQEYERKEK 222
           MNDTDV +QIQQMVRFIRQEA EKA EISV+AEEEFNIEKLQLVEAEKKKI  EYERKEK
Sbjct: 1   MNDTDVQKQIQQMVRFIRQEAEEKANEISVAAEEEFNIEKLQLVEAEKKKIRPEYERKEK 60

Query: 223 QVDVRKKIEYSMQLNASRIKVLQAQ 297
           QV VR+KIEYSMQLNASRIKVLQAQ
Sbjct: 61  QVQVRRKIEYSMQLNASRIKVLQAQ 85

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>VATE_MANSE (P31402) Vacuolar ATP synthase subunit E (EC 3.6.3.14) (V-ATPase E|
           subunit) (Vacuolar proton pump E subunit) (V-ATPase 28
           kDa subunit)
          Length = 226

 Score = 92.4 bits (228), Expect = 3e-19
 Identities = 46/85 (54%), Positives = 65/85 (76%)
 Frame = +1

Query: 43  MNDTDVSRQIQQMVRFIRQEA*EKAGEISVSAEEEFNIEKLQLVEAEKKKITQEYERKEK 222
           ++D DV +QI+ M+ FI QEA EKA EI   AEEEFNIEK +LV+ ++ KI + YE+KEK
Sbjct: 3   LSDADVQKQIKHMMAFIEQEANEKAEEIDAKAEEEFNIEKGRLVQQQRLKIMEYYEKKEK 62

Query: 223 QVDVRKKIEYSMQLNASRIKVLQAQ 297
           QV+++KKI+ S  LN +R+KVL+ +
Sbjct: 63  QVELQKKIQSSNMLNQARLKVLKVR 87

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>VATE_DROME (P54611) Vacuolar ATP synthase subunit E (EC 3.6.3.14) (V-ATPase E|
           subunit) (Vacuolar proton pump E subunit) (V-ATPase 28
           kDa subunit)
          Length = 226

 Score = 92.4 bits (228), Expect = 3e-19
 Identities = 46/85 (54%), Positives = 65/85 (76%)
 Frame = +1

Query: 43  MNDTDVSRQIQQMVRFIRQEA*EKAGEISVSAEEEFNIEKLQLVEAEKKKITQEYERKEK 222
           ++D DV +QI+ M+ FI QEA EKA EI   AEEEFNIEK +LV+ ++ KI + YE+KEK
Sbjct: 3   LSDADVQKQIKHMMAFIEQEANEKAEEIDAKAEEEFNIEKGRLVQQQRLKIMEYYEKKEK 62

Query: 223 QVDVRKKIEYSMQLNASRIKVLQAQ 297
           QV+++KKI+ S  LN +R+KVL+ +
Sbjct: 63  QVELQKKIQSSNMLNQARLKVLKVR 87

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>VATE_HUMAN (P36543) Vacuolar ATP synthase subunit E (EC 3.6.3.14) (V-ATPase E|
           subunit) (Vacuolar proton pump E subunit) (V-ATPase 31
           kDa subunit) (P31)
          Length = 226

 Score = 91.7 bits (226), Expect = 4e-19
 Identities = 45/85 (52%), Positives = 65/85 (76%)
 Frame = +1

Query: 43  MNDTDVSRQIQQMVRFIRQEA*EKAGEISVSAEEEFNIEKLQLVEAEKKKITQEYERKEK 222
           ++D DV +QI+ M+ FI QEA EKA EI   AEEEFNIEK +LV+ ++ KI + YE+KEK
Sbjct: 3   LSDADVQKQIKHMMAFIEQEANEKAEEIDAKAEEEFNIEKGRLVQTQRLKIMEYYEKKEK 62

Query: 223 QVDVRKKIEYSMQLNASRIKVLQAQ 297
           Q++ +KKI+ S  +N +R+KVL+A+
Sbjct: 63  QIEQQKKIQMSNLMNQARLKVLRAR 87

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>VATE_BOVIN (P11019) Vacuolar ATP synthase subunit E (EC 3.6.3.14) (V-ATPase E|
           subunit) (Vacuolar proton pump E subunit) (V-ATPase 31
           kDa subunit) (P31)
          Length = 226

 Score = 91.7 bits (226), Expect = 4e-19
 Identities = 45/85 (52%), Positives = 65/85 (76%)
 Frame = +1

Query: 43  MNDTDVSRQIQQMVRFIRQEA*EKAGEISVSAEEEFNIEKLQLVEAEKKKITQEYERKEK 222
           ++D DV +QI+ M+ FI QEA EKA EI   AEEEFNIEK +LV+ ++ KI + YE+KEK
Sbjct: 3   LSDADVQKQIKHMMAFIEQEANEKAEEIDAKAEEEFNIEKGRLVQTQRLKIMEYYEKKEK 62

Query: 223 QVDVRKKIEYSMQLNASRIKVLQAQ 297
           Q++ +KKI+ S  +N +R+KVL+A+
Sbjct: 63  QIEQQKKIQMSNLMNQARLKVLRAR 87

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>VATE_HETSC (Q9U1G5) Vacuolar ATP synthase subunit E (EC 3.6.3.14) (V-ATPase E|
           subunit) (Vacuolar proton pump E subunit)
          Length = 226

 Score = 89.7 bits (221), Expect = 2e-18
 Identities = 44/85 (51%), Positives = 65/85 (76%)
 Frame = +1

Query: 43  MNDTDVSRQIQQMVRFIRQEA*EKAGEISVSAEEEFNIEKLQLVEAEKKKITQEYERKEK 222
           ++D DV +Q++ M+ FI QEA EKA EI   AEEEFNIEK +LV+ +++KI + YE+KEK
Sbjct: 3   ISDNDVQKQLRHMMAFIEQEANEKAEEIDAKAEEEFNIEKGKLVQLQRQKIMEYYEKKEK 62

Query: 223 QVDVRKKIEYSMQLNASRIKVLQAQ 297
           QV++++KI+ S   N SR+K L+A+
Sbjct: 63  QVELQRKIQRSNMQNQSRLKCLKAR 87

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>VATE_DICDI (O00780) Vacuolar ATP synthase subunit E (EC 3.6.3.14) (V-ATPase E|
           subunit) (Vacuolar proton pump E subunit)
          Length = 233

 Score = 80.9 bits (198), Expect = 8e-16
 Identities = 41/85 (48%), Positives = 59/85 (69%)
 Frame = +1

Query: 43  MNDTDVSRQIQQMVRFIRQEA*EKAGEISVSAEEEFNIEKLQLVEAEKKKITQEYERKEK 222
           M+DT V+ Q+ QM  FI QEA +KA EI   A +EF  EK ++ + EK KI +EYE+K+K
Sbjct: 1   MDDTQVNAQLDQMKNFILQEAQDKANEIKTKATQEFTSEKGRIFQNEKIKIIKEYEKKQK 60

Query: 223 QVDVRKKIEYSMQLNASRIKVLQAQ 297
            ++V+KKI  S +LN SR+ VL+ +
Sbjct: 61  LIEVQKKINLSNELNKSRLSVLKVR 85

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>VATE_MOUSE (P50518) Vacuolar ATP synthase subunit E (EC 3.6.3.14) (V-ATPase E|
           subunit) (Vacuolar proton pump E subunit) (V-ATPase 31
           kDa subunit) (P31)
          Length = 228

 Score = 78.6 bits (192), Expect = 4e-15
 Identities = 44/87 (50%), Positives = 62/87 (71%), Gaps = 2/87 (2%)
 Frame = +1

Query: 43  MNDTDVSRQIQQMVRFIRQEA*EKAGE-ISVSAEEEFNIEKLQLVEAEKKKITQEYERKE 219
           +   DV +QI+ M+ FI QEA EKA E I   AEEEFNIEK +L+E ++ KI + YE+KE
Sbjct: 3   LRHADVQKQIKHMMAFIEQEANEKAEEEIDAKAEEEFNIEKGRLLETQRLKIMEYYEKKE 62

Query: 220 KQV-DVRKKIEYSMQLNASRIKVLQAQ 297
           KQ+   +KKI+ S  +N +R+KVL+A+
Sbjct: 63  KQIRQQQKKIQMSNLMNQARLKVLRAR 89

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>VATE_NEUCR (Q01278) Vacuolar ATP synthase subunit E (EC 3.6.3.14) (V-ATPase E|
           subunit) (Vacuolar proton pump E subunit) (V-ATPase 26
           kDa subunit)
          Length = 230

 Score = 67.8 bits (164), Expect = 7e-12
 Identities = 35/85 (41%), Positives = 54/85 (63%)
 Frame = +1

Query: 43  MNDTDVSRQIQQMVRFIRQEA*EKAGEISVSAEEEFNIEKLQLVEAEKKKITQEYERKEK 222
           ++D  V +++++M  FI+QEA EKA EI + A+EEF IEK +LV  E   I   Y +K K
Sbjct: 7   LSDDQVGQELRKMTAFIKQEAEEKAREIQIKADEEFAIEKSKLVRQETDAIDSAYAKKFK 66

Query: 223 QVDVRKKIEYSMQLNASRIKVLQAQ 297
           Q  + ++I  S   N +R++VL A+
Sbjct: 67  QAQMSQQITRSTMANKTRLRVLGAR 91

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>VATE_SCHPO (O13687) Vacuolar ATP synthase subunit E (EC 3.6.3.14) (V-ATPase E|
           subunit) (Vacuolar proton pump E subunit) (V-ATPase 26
           kDa subunit)
          Length = 227

 Score = 66.2 bits (160), Expect = 2e-11
 Identities = 34/85 (40%), Positives = 54/85 (63%)
 Frame = +1

Query: 43  MNDTDVSRQIQQMVRFIRQEA*EKAGEISVSAEEEFNIEKLQLVEAEKKKITQEYERKEK 222
           ++D  V  ++ +MV FI+QEA EKA EI   +EEEF +EK ++V  +   I Q Y+ K K
Sbjct: 3   LSDEQVQAEMHKMVSFIKQEALEKAKEIHTLSEEEFQVEKAKIVREQCDAIDQTYDMKLK 62

Query: 223 QVDVRKKIEYSMQLNASRIKVLQAQ 297
           +  + +KI  S  LN SR+++L ++
Sbjct: 63  RASMAQKIAKSNVLNKSRLEILNSK 87

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>VATE_CANAL (O94072) Vacuolar ATP synthase subunit E (EC 3.6.3.14) (V-ATPase E|
           subunit) (Vacuolar proton pump E subunit)
          Length = 226

 Score = 59.3 bits (142), Expect = 2e-09
 Identities = 30/85 (35%), Positives = 51/85 (60%)
 Frame = +1

Query: 43  MNDTDVSRQIQQMVRFIRQEA*EKAGEISVSAEEEFNIEKLQLVEAEKKKITQEYERKEK 222
           ++D  V  ++ +M  FI +EA EKA EI + A+EE+ IEK  +V +E   I   YE+K K
Sbjct: 3   LSDEQVKSELSKMQAFIEKEAKEKAKEIKLKADEEYEIEKASIVRSETAAIDSTYEQKLK 62

Query: 223 QVDVRKKIEYSMQLNASRIKVLQAQ 297
           +  + ++I  S   N +R+++L  +
Sbjct: 63  KASLAQQITKSTIGNKTRLRILSTK 87

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>VATE_YEAST (P22203) Vacuolar ATP synthase subunit E (EC 3.6.3.14) (V-ATPase E|
           subunit) (Vacuolar proton pump E subunit) (V-ATPase 27
           kDa subunit)
          Length = 232

 Score = 55.8 bits (133), Expect = 3e-08
 Identities = 31/91 (34%), Positives = 52/91 (57%)
 Frame = +1

Query: 25  AAADAKMNDTDVSRQIQQMVRFIRQEA*EKAGEISVSAEEEFNIEKLQLVEAEKKKITQE 204
           ++A   +    V+ ++ +M  FIR+EA EKA EI + A++E+ IEK  +V  E   I   
Sbjct: 1   SSAITALTPNQVNDELNKMQAFIRKEAEEKAKEIQLKADQEYEIEKTNIVRNETNNIDGN 60

Query: 205 YERKEKQVDVRKKIEYSMQLNASRIKVLQAQ 297
           ++ K K+  + ++I  S   N  R+KVL A+
Sbjct: 61  FKSKLKKAMLSQQITKSTIANKMRLKVLSAR 91

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>VATE_HALVO (Q48329) V-type ATP synthase subunit E (EC 3.6.3.14) (V-type ATPase|
           subunit E)
          Length = 194

 Score = 34.3 bits (77), Expect = 0.083
 Identities = 23/79 (29%), Positives = 39/79 (49%)
 Frame = +1

Query: 55  DVSRQIQQMVRFIRQEA*EKAGEISVSAEEEFNIEKLQLVEAEKKKITQEYERKEKQVDV 234
           D+  + +     IRQ+  E+A EI   AE +      +L+E+ K  + Q+ ER+ +Q   
Sbjct: 9   DIRDEARARAEDIRQDGQEQADEIVAEAEADAE----ELLESRKADVEQQLEREREQALS 64

Query: 235 RKKIEYSMQLNASRIKVLQ 291
             K+E      ++R  VLQ
Sbjct: 65  SAKLEAKQARLSARRDVLQ 83

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>SYT_FUSNN (Q8RFS6) Threonyl-tRNA synthetase (EC 6.1.1.3) (Threonine--tRNA|
           ligase) (ThrRS)
          Length = 620

 Score = 32.0 bits (71), Expect = 0.41
 Identities = 19/49 (38%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
 Frame = +1

Query: 142 EEFNIEKLQLVEAEKKKITQEYERKEKQVDVR-KKIEYSMQLNASRIKV 285
           E+F  E L+ +EAE K+I +E  + EK V  R + IEY   ++ ++ KV
Sbjct: 91  EQFTEEDLEKIEAEMKRIVKENIKLEKYVLPRDEAIEYFRDVDKNKYKV 139

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>PUMA_PARUN (O61308) 227 kDa spindle- and centromere-associated protein (PUMA1)|
          Length = 1955

 Score = 31.6 bits (70), Expect = 0.54
 Identities = 15/52 (28%), Positives = 31/52 (59%)
 Frame = +1

Query: 127  SVSAEEEFNIEKLQLVEAEKKKITQEYERKEKQVDVRKKIEYSMQLNASRIK 282
            +++ E+   IEKL++   E   + ++Y  K K+VD  K++E + +L  +R +
Sbjct: 1132 TITKEQNEKIEKLRI---EHDHLERDYREKTKEVDRLKEVEKTFELKVNRAR 1180

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>GARP_PLAFF (P13816) Glutamic acid-rich protein precursor|
          Length = 678

 Score = 31.6 bits (70), Expect = 0.54
 Identities = 26/90 (28%), Positives = 47/90 (52%), Gaps = 8/90 (8%)
 Frame = +1

Query: 16  VRSAAADAKMNDTD-------VSRQIQQMVRFI-RQEA*EKAGEISVSAEEEFNIEKLQL 171
           V   + D K ND +          Q ++M++ + ++E  +K  E+    +E+  IEK + 
Sbjct: 228 VHETSNDTKDNDKENISEDKKEDHQQEEMLKTLDKKERKQKEKEM----KEQEKIEKKKK 283

Query: 172 VEAEKKKITQEYERKEKQVDVRKKIEYSMQ 261
            + EK+K  QE ERK+++   RK+ E  M+
Sbjct: 284 KQEEKEKKKQEKERKKQEKKERKQKEKEMK 313

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>PRIL_METBF (Q46E38) Probable DNA primase large subunit (EC 2.7.7.-)|
          Length = 413

 Score = 31.2 bits (69), Expect = 0.70
 Identities = 15/35 (42%), Positives = 23/35 (65%)
 Frame = +1

Query: 139 EEEFNIEKLQLVEAEKKKITQEYERKEKQVDVRKK 243
           E+E   EK +  E EK++  +E E KEKQ +++KK
Sbjct: 337 EKEMEKEKEEKEEKEKQEEKKEEEEKEKQEEIKKK 371

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>MYH8_HUMAN (P13535) Myosin-8 (Myosin heavy chain, skeletal muscle, perinatal)|
            (MyHC-perinatal)
          Length = 1937

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 17/101 (16%), Positives = 49/101 (48%), Gaps = 12/101 (11%)
 Frame = +1

Query: 19   RSAAADAKMNDTDVSRQIQQMVRFIRQEA*EKAGEISVSAEEEFNIEKLQ---------- 168
            R++ A A+   +D+SR+++++   + +     + ++ ++ + E   +KL+          
Sbjct: 1129 RASRAKAEKQRSDLSRELEEISERLEEAGGATSAQVELNKKREAEFQKLRRDLEEATLQH 1188

Query: 169  --LVEAEKKKITQEYERKEKQVDVRKKIEYSMQLNASRIKV 285
              +V A +KK         +Q+D  ++++  ++   S +K+
Sbjct: 1189 EAMVAALRKKHADSMAELGEQIDNLQRVKQKLEKEKSELKM 1229

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>REN3A_HUMAN (Q9H1J1) Regulator of nonsense transcripts 3A (Nonsense mRNA|
           reducing factor 3A) (Up-frameshift suppressor 3 homolog
           A) (hUpf3)
          Length = 476

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
 Frame = +1

Query: 58  VSRQIQQMVRFIRQEA*EKAGEISVSAEEEFN--IEKLQLVEAEKKKITQEYERKEKQVD 231
           ++R+   ++ +I+    EK        EE     +EK +L E EK++  +E   K+K+ D
Sbjct: 210 IARRTTPLLEYIKNRKLEKQRIREEKREERRRRELEKKRLREEEKRRRREEERCKKKETD 269

Query: 232 VRKKI 246
            +KKI
Sbjct: 270 KQKKI 274

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>PHF14_HUMAN (O94880) PHD finger protein 14|
          Length = 888

 Score = 29.6 bits (65), Expect = 2.0
 Identities = 18/57 (31%), Positives = 29/57 (50%)
 Frame = +1

Query: 112 KAGEISVSAEEEFNIEKLQLVEAEKKKITQEYERKEKQVDVRKKIEYSMQLNASRIK 282
           K  ++  SAEEE    + QL++ EKK+  +  ER  K+ +  K+ E   +    R K
Sbjct: 77  KEEQLKNSAEEEVLSSEKQLIKMEKKEEEENGERPRKKREKEKEKEKEKEKEKEREK 133

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>MOES_RAT (O35763) Moesin (Membrane-organizing extension spike protein)|
          Length = 576

 Score = 29.6 bits (65), Expect = 2.0
 Identities = 24/81 (29%), Positives = 43/81 (53%), Gaps = 4/81 (4%)
 Frame = +1

Query: 67  QIQQMVRFIRQEA*EKAGEISVSAEEEFNIEKLQLVEAEKKKITQEYE---RKEKQVDVR 237
           ++QQM    R+E  +K  E ++   E+   +K +L E EK+KI +E E    K KQ++ +
Sbjct: 300 EVQQMKAQAREEKHQKQMERALLENEK---KKRELAEKEKEKIEREKEELMEKLKQIEEQ 356

Query: 238 -KKIEYSMQLNASRIKVLQAQ 297
            KK +  ++    R   L+ +
Sbjct: 357 TKKAQQELEEQTRRALELEQE 377

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>MOES_MOUSE (P26041) Moesin (Membrane-organizing extension spike protein)|
          Length = 576

 Score = 29.6 bits (65), Expect = 2.0
 Identities = 24/81 (29%), Positives = 43/81 (53%), Gaps = 4/81 (4%)
 Frame = +1

Query: 67  QIQQMVRFIRQEA*EKAGEISVSAEEEFNIEKLQLVEAEKKKITQEYE---RKEKQVDVR 237
           ++QQM    R+E  +K  E ++   E+   +K +L E EK+KI +E E    K KQ++ +
Sbjct: 300 EVQQMKAQAREEKHQKQMERALLENEK---KKRELAEKEKEKIEREKEELMEKLKQIEEQ 356

Query: 238 -KKIEYSMQLNASRIKVLQAQ 297
            KK +  ++    R   L+ +
Sbjct: 357 TKKAQQELEEQTRRALELEQE 377

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>Y223_METJA (Q57676) Hypothetical protein MJ0223|
          Length = 104

 Score = 29.6 bits (65), Expect = 2.0
 Identities = 22/94 (23%), Positives = 48/94 (51%), Gaps = 3/94 (3%)
 Frame = +1

Query: 16  VRSAAADAKMNDTDVSRQIQQM---VRFIRQEA*EKAGEISVSAEEEFNIEKLQLVEAEK 186
           V  A  + K+ +    ++I++       I+ EA E+A ++   AEEE      +LVE   
Sbjct: 5   VMEAIKEVKLAEEQAVKEIEEAKNRAEQIKAEAIEEAKKLIAEAEEEAK----KLVEEMI 60

Query: 187 KKITQEYERKEKQVDVRKKIEYSMQLNASRIKVL 288
           KK  +E +++ +++    + E    ++ +++K+L
Sbjct: 61  KKAEEEAKKEAEKILEETEKEIKEIISIAKVKIL 94

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>CCD50_CHICK (Q5ZM86) Coiled-coil domain-containing protein 50|
          Length = 301

 Score = 29.6 bits (65), Expect = 2.0
 Identities = 21/89 (23%), Positives = 50/89 (56%)
 Frame = +1

Query: 7   RTIVRSAAADAKMNDTDVSRQIQQMVRFIRQEA*EKAGEISVSAEEEFNIEKLQLVEAEK 186
           +T+      + +++D +++R++Q+    +  +A + A ++   A++E   E  +L+ AE+
Sbjct: 159 QTVYDKPRREQELSDAEIARKLQEE-ELLANQADQMAAQV---AQDE---EIARLLMAEE 211

Query: 187 KKITQEYERKEKQVDVRKKIEYSMQLNAS 273
           KK  ++ + KEK    RK+ +   + +AS
Sbjct: 212 KKAFKKGKEKEKSSFERKRNDQDWKHDAS 240

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>AKAP2_HUMAN (Q9Y2D5) A-kinase anchor protein 2 (Protein kinase A-anchoring|
           protein 2) (PRKA2) (AKAP-2)
          Length = 1103

 Score = 29.3 bits (64), Expect = 2.7
 Identities = 21/52 (40%), Positives = 30/52 (57%)
 Frame = +1

Query: 136 AEEEFNIEKLQLVEAEKKKITQEYERKEKQVDVRKKIEYSMQLNASRIKVLQ 291
           AE E + E+LQ + AEK+K   E E K +Q+D     E  + L  S+ KVL+
Sbjct: 2   AEAELHKERLQAI-AEKRKRQTEIEGKRQQLD-----EQILLLQHSKSKVLR 47

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>MYH4_HUMAN (Q9Y623) Myosin-4 (Myosin heavy chain, skeletal muscle, fetal)|
            (Myosin heavy chain IIb) (MyHC-IIb)
          Length = 1939

 Score = 29.3 bits (64), Expect = 2.7
 Identities = 17/101 (16%), Positives = 47/101 (46%), Gaps = 12/101 (11%)
 Frame = +1

Query: 19   RSAAADAKMNDTDVSRQIQQMVRFIRQEA*EKAGEISVSAEEEFNIEKLQ---------- 168
            R++ A A+   +D+SR+++++   + +     + +I ++ + E   +K++          
Sbjct: 1130 RASRAKAEKQRSDLSRELEEISERLEEAGGATSAQIELNKKREAEFQKMRRDLEESTLQH 1189

Query: 169  --LVEAEKKKITQEYERKEKQVDVRKKIEYSMQLNASRIKV 285
                 A +KK         KQ+D  ++++  ++   S +K+
Sbjct: 1190 EATAAALRKKHADSVAELGKQIDSLQRVKQKLEKEKSELKM 1230

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>PFDB_METJA (Q58394) Prefoldin beta subunit (GimC beta subunit)|
          Length = 113

 Score = 29.3 bits (64), Expect = 2.7
 Identities = 23/84 (27%), Positives = 38/84 (45%), Gaps = 6/84 (7%)
 Frame = +1

Query: 64  RQIQQMVRFIRQEA*EKAGEISVSAEEEFNIEKLQLVEAEKKKITQEYER------KEKQ 225
           +Q+QQ ++ I  +          S E E    K  L E EK    + Y+       K K+
Sbjct: 15  QQLQQQLQMILMQ--------KQSVETELKECKKALEELEKSSSDEVYKLVGGLFVKRKK 66

Query: 226 VDVRKKIEYSMQLNASRIKVLQAQ 297
            DV+K++E  ++    R+K L+ Q
Sbjct: 67  EDVKKELEEKVETLELRVKTLEKQ 90

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>M49_STRP9 (P16947) M protein, serotype 49 precursor|
          Length = 389

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 20/72 (27%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
 Frame = +1

Query: 67  QIQQMVRFIRQEA*EKAGEISVSAEEEFNIEKLQLVEAEKKKITQEYE--RKEKQVDVRK 240
           Q+Q+  +   ++   +A   S+S + E + E  + VEA+   +T E++  ++EKQ+    
Sbjct: 149 QLQKQQQLETEKQISEASRKSLSRDLEASREAKKKVEADLAALTAEHQKLKEEKQISDAS 208

Query: 241 KIEYSMQLNASR 276
           +   S  L ASR
Sbjct: 209 RQGLSRDLEASR 220

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>PRP3_YEAST (Q03338) U4/U6 small nuclear ribonucleoprotein PRP3|
           (Pre-mRNA-splicing factor 3)
          Length = 469

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 18/44 (40%), Positives = 25/44 (56%)
 Frame = +1

Query: 118 GEISVSAEEEFNIEKLQLVEAEKKKITQEYERKEKQVDVRKKIE 249
           GEIS    +E  ++K Q  E  K+K+ QE + K+K    RK IE
Sbjct: 96  GEISKRIAQERTLQKQQEEEELKRKLKQEEDEKDK----RKLIE 135

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>IF2_RALEJ (Q46ZP1) Translation initiation factor IF-2|
          Length = 966

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 24/90 (26%), Positives = 37/90 (41%)
 Frame = +1

Query: 28  AADAKMNDTDVSRQIQQMVRFIRQEA*EKAGEISVSAEEEFNIEKLQLVEAEKKKITQEY 207
           AA+A         + QQ     RQEA  KA   +   EE     K + +EAE+++  +  
Sbjct: 118 AAEAAEQARREEEERQQAAELARQEAEAKARREAAEREEAERRAKQEALEAEQRRQAELL 177

Query: 208 ERKEKQVDVRKKIEYSMQLNASRIKVLQAQ 297
            RK ++     +       +ASR K    Q
Sbjct: 178 ARKAEEEAAAARAVGEAAEDASRKKAEDEQ 207

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>DC1I2_RAT (Q62871) Cytoplasmic dynein 1 intermediate chain 2 (Dynein|
           intermediate chain 2, cytosolic) (DH IC-2) (Cytoplasmic
           dynein intermediate chain 2)
          Length = 638

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 16/44 (36%), Positives = 27/44 (61%)
 Frame = +1

Query: 130 VSAEEEFNIEKLQLVEAEKKKITQEYERKEKQVDVRKKIEYSMQ 261
           + AE E   ++L  +  EKK+  +E ERK+K+ D +K+   S+Q
Sbjct: 7   LKAELERKKQRLAQIREEKKR--KEEERKKKETDQKKEAAVSVQ 48

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>RAD50_AQUAE (O67124) Probable DNA double-strand break repair rad50 ATPase|
          Length = 978

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 18/42 (42%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
 Frame = +1

Query: 121 EISVSAEE-EFNIEKLQLVEAEKKKITQEYERKEKQVDVRKK 243
           E++V  +E  F  E+L  +EAEK+K  +E ER EK+++ R K
Sbjct: 303 ELAVLKDELSFAQEELNRIEAEKEKFKEEKER-EKELEHRLK 343

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>DC1I2_MOUSE (O88487) Cytoplasmic dynein 1 intermediate chain 2 (Dynein|
           intermediate chain 2, cytosolic) (DH IC-2) (Cytoplasmic
           dynein intermediate chain 2)
          Length = 612

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 16/44 (36%), Positives = 27/44 (61%)
 Frame = +1

Query: 130 VSAEEEFNIEKLQLVEAEKKKITQEYERKEKQVDVRKKIEYSMQ 261
           + AE E   ++L  +  EKK+  +E ERK+K+ D +K+   S+Q
Sbjct: 7   LKAELERKKQRLAQIREEKKR--KEEERKKKETDQKKEAAVSVQ 48

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>M3K2_ARATH (Q9FZ36) Mitogen-activated protein kinase kinase kinase 2 (EC|
           2.7.11.25) (Arabidospsis NPK1-related protein kinase 2)
          Length = 651

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
 Frame = +1

Query: 112 KAGEISVSAEEEFNIEKLQLVEAEKK---KITQEYERKEKQV 228
           K    S  AE+E N + + L E E+K   ++ QE ERK +++
Sbjct: 581 KNSNASAGAEQESNSQSVALSEIERKWKEELDQELERKRREI 622

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>PFDB_ARCFU (O29115) Prefoldin beta subunit (GimC beta subunit)|
          Length = 116

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
 Frame = +1

Query: 67  QIQQMVRFIRQEA*EKAGEISVSAEEEFNIEKLQLVEAEKK--KITQEYERKEKQVDVRK 240
           Q+QQ+ + ++    ++A   ++  + E  +E+LQ V+ E    K       KEK+ DV K
Sbjct: 14  QLQQLQQQLQAVITQRAQVEALLRDTEQALEELQKVDDETPVYKAVGNILVKEKKEDVIK 73

Query: 241 KIEYSMQLNASRIKVLQAQ 297
           ++    +    RIK LQ Q
Sbjct: 74  ELTEKKETYEIRIKTLQRQ 92

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>REST_CHICK (O42184) Restin (Cytoplasmic linker protein 170) (CLIP-170)|
          Length = 1433

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 16/54 (29%), Positives = 28/54 (51%)
 Frame = +1

Query: 130 VSAEEEFNIEKLQLVEAEKKKITQEYERKEKQVDVRKKIEYSMQLNASRIKVLQ 291
           V A +   +E L  +E EK+K+     R E++   +  +E   +L  +RIK L+
Sbjct: 418 VEAADREKVELLNQLEEEKRKVEDLQFRVEEESITKGDLETQTKLEHARIKELE 471

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>MST2_DROHY (Q08696) Axoneme-associated protein mst101(2)|
          Length = 1391

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
 Frame = +1

Query: 109 EKAGEISVSAEEEFNIEKL--QLVEAEKKKITQEYERKEKQVDVRKKIE 249
           EK+ +    A E+   EK   +  EA +KK  +E  +KEK+V  RKK E
Sbjct: 560 EKSAKKRKEAAEKKKCEKAAKERKEAAEKKKCEEAAKKEKEVAERKKCE 608



 Score = 27.7 bits (60), Expect = 7.8
 Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 7/84 (8%)
 Frame = +1

Query: 19  RSAAADAKMNDTDVSRQIQQMVRFIRQEA*EK-----AGEISVSAEEEFNIEKL--QLVE 177
           + AA   K  + D  +  +++ +  ++EA EK     A      A E+   EK   +  E
Sbjct: 350 KCAALAKKQKEEDEKKACKELAKK-KKEADEKKKCEEAANKEKKAAEKKKCEKAAKERKE 408

Query: 178 AEKKKITQEYERKEKQVDVRKKIE 249
           A +KK  +E  +KEK+   RKK E
Sbjct: 409 AAEKKKCEEAAKKEKEAAERKKCE 432

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>MOES_PIG (P26042) Moesin (Membrane-organizing extension spike protein)|
          Length = 576

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 22/81 (27%), Positives = 43/81 (53%), Gaps = 4/81 (4%)
 Frame = +1

Query: 67  QIQQMVRFIRQEA*EKAGEISVSAEEEFNIEKLQLVEAEKKKITQEYE---RKEKQVDVR 237
           ++QQM    R+E  +K  E ++   E+   +K ++ E EK+KI +E E    + KQ++ +
Sbjct: 300 EVQQMKAQAREEKHQKQMERALLENEK---KKREMAEKEKEKIEREKEELMERLKQIEEQ 356

Query: 238 -KKIEYSMQLNASRIKVLQAQ 297
            KK +  ++    R   L+ +
Sbjct: 357 TKKAQQELEEQTRRALALEQE 377

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>SSUB_BACSU (P97027) Putative aliphatic sulfonates transport ATP-binding|
           protein ssuB
          Length = 270

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 16/60 (26%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
 Frame = +1

Query: 10  TIVRSAAADAKMNDTDVSRQIQQMVRFIRQEA*EKA--GEISVSAEEEFNIEKLQLVEAE 183
           T+ ++ AAD  + D  V +++ +++  +R +  EKA   E+S    +   I +  L E E
Sbjct: 106 TVEQNIAADLNLKDPKVKQKVDELIEIVRLKGSEKAYPRELSGGMSQRVAITRALLREPE 165

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>SMC4_XENLA (P50532) Structural maintenance of chromosome 4|
           (Chromosome-associated protein C) (Chromosome assembly
           protein XCAP-C)
          Length = 1290

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 16/69 (23%), Positives = 41/69 (59%)
 Frame = +1

Query: 55  DVSRQIQQMVRFIRQEA*EKAGEISVSAEEEFNIEKLQLVEAEKKKITQEYERKEKQVDV 234
           DV +Q+ ++ +FI +   EK  ++ +  ++    EKL+  +++ KK+ ++ ++ +++VD 
Sbjct: 365 DVEKQLNKITKFIEENR-EKFTQLDL--QDVDTREKLKHSKSKVKKLQKQLQKDKEKVDE 421

Query: 235 RKKIEYSMQ 261
            K +  + Q
Sbjct: 422 LKNVPANSQ 430

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>REST_HUMAN (P30622) Restin (Cytoplasmic linker protein 170 alpha-2) (CLIP-170)|
           (Reed-Sternberg intermediate filament-associated
           protein) (Cytoplasmic linker protein 1)
          Length = 1427

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 16/54 (29%), Positives = 28/54 (51%)
 Frame = +1

Query: 130 VSAEEEFNIEKLQLVEAEKKKITQEYERKEKQVDVRKKIEYSMQLNASRIKVLQ 291
           V A +   +E L  +E EK+K+     R E++   +  +E   +L  +RIK L+
Sbjct: 417 VEAADREKVELLNQLEEEKRKVEDLQFRVEEESITKGDLETQTKLEHARIKELE 470

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>MAP1A_RAT (P34926) Microtubule-associated protein 1A (MAP 1A) [Contains: MAP1|
           light chain LC2]
          Length = 2774

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 15/52 (28%), Positives = 32/52 (61%)
 Frame = +1

Query: 85  RFIRQEA*EKAGEISVSAEEEFNIEKLQLVEAEKKKITQEYERKEKQVDVRK 240
           R I+ +A +K  +  +S  EE   ++ + ++ E+K++ +E  RKE++ D +K
Sbjct: 394 RLIKDKAGKKHLKEKISKLEEKKDKEKKEIKKERKELKKEEGRKEEKKDAKK 445

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>ABRA_PLAF7 (Q8I5D2) 101 kDa malaria antigen (p101) (Acidic basic repeat|
           antigen)
          Length = 743

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 18/67 (26%), Positives = 37/67 (55%)
 Frame = +1

Query: 49  DTDVSRQIQQMVRFIRQEA*EKAGEISVSAEEEFNIEKLQLVEAEKKKITQEYERKEKQV 228
           + ++ +Q++ + + I  E    A +     EEE   EK +  + EK+K  +E E++EK+ 
Sbjct: 648 EEEMEKQVEAITKQIEAEVDALAPKNK--EEEEKEKEKEEKEKEEKEKEKEEKEKEEKEK 705

Query: 229 DVRKKIE 249
           + ++K E
Sbjct: 706 EEKEKEE 712

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>MOES_HUMAN (P26038) Moesin (Membrane-organizing extension spike protein)|
          Length = 576

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 20/61 (32%), Positives = 36/61 (59%)
 Frame = +1

Query: 67  QIQQMVRFIRQEA*EKAGEISVSAEEEFNIEKLQLVEAEKKKITQEYERKEKQVDVRKKI 246
           ++QQM    R+E  +K  E ++   E+   +K ++ E EK+KI +E   KE+ ++  K+I
Sbjct: 300 EVQQMKAQAREEKHQKQMERAMLENEK---KKREMAEKEKEKIERE---KEELMERLKQI 353

Query: 247 E 249
           E
Sbjct: 354 E 354

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>FYV7_KLULA (Q6CRY6) Protein FYV7|
          Length = 144

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 16/41 (39%), Positives = 24/41 (58%)
 Frame = +1

Query: 169 LVEAEKKKITQEYERKEKQVDVRKKIEYSMQLNASRIKVLQ 291
           + + EKKK T+EY  KE Q ++ KK     +L    +KVL+
Sbjct: 1   MAKVEKKKFTKEYRLKEIQRNLTKK----ARLKKEYLKVLK 37

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>TPIS_PLAFA (Q07412) Triosephosphate isomerase (EC 5.3.1.1) (TIM)|
           (Triose-phosphate isomerase)
          Length = 248

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 15/54 (27%), Positives = 29/54 (53%)
 Frame = +1

Query: 118 GEISVSAEEEFNIEKLQLVEAEKKKITQEYERKEKQVDVRKKIEYSMQLNASRI 279
           GE+S    ++ NIE + +   E++K   E +      DVR+K++ S++ N   +
Sbjct: 76  GEVSAEIAKDLNIEYVIIGHFERRKYFHETDE-----DVREKLQASLKNNLKAV 124

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>TPIS_PLAF7 (Q7KQM0) Triosephosphate isomerase (EC 5.3.1.1) (TIM)|
           (Triose-phosphate isomerase)
          Length = 248

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 15/54 (27%), Positives = 29/54 (53%)
 Frame = +1

Query: 118 GEISVSAEEEFNIEKLQLVEAEKKKITQEYERKEKQVDVRKKIEYSMQLNASRI 279
           GE+S    ++ NIE + +   E++K   E +      DVR+K++ S++ N   +
Sbjct: 76  GEVSAEIAKDLNIEYVIIGHFERRKYFHETDE-----DVREKLQASLKNNLKAV 124

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>Y1923_AQUAE (O67752) Hypothetical protein aq_1923 precursor|
          Length = 296

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 5/66 (7%)
 Frame = +1

Query: 85  RFIRQEA*EKAGEISVSAEEEFNIEKLQLVEAEKKKITQEYERK-----EKQVDVRKKIE 249
           R I++EA +K G+      EEF  E ++ +E EK K   E+ER      EK ++  K+I+
Sbjct: 204 RVIKKEA-QKRGK----TPEEFKKELIRKIEEEKLKARSEFERNLLDAFEKFLEKGKEIK 258

Query: 250 YSMQLN 267
             ++ N
Sbjct: 259 VVIKPN 264

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>POTA_MYCPN (P75059) Spermidine/putrescine import ATP-binding protein potA (EC|
           3.6.3.31)
          Length = 560

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
 Frame = +1

Query: 142 EEFNIEKLQLVEAEKKKITQEYERKEK--QVDVRKKIEYSMQLNASRIKVL 288
           E  + +KLQ +EAEKK + +++E+ E+  Q D        M+L   + +VL
Sbjct: 193 ESLSKQKLQQLEAEKKLLDKKFEQTERKYQKDAWMATHSEMRLKQFKQEVL 243

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>Y2340_ARCFU (O27944) Hypothetical protein AF2340|
          Length = 633

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 22/83 (26%), Positives = 38/83 (45%), Gaps = 20/83 (24%)
 Frame = +1

Query: 109 EKAGEISVSAEEE----FNIE----------------KLQLVEAEKKKITQEYERKEKQV 228
           E+  E+S S +EE    FN E                K++ VE E  +I+++ ERK +++
Sbjct: 453 EEGAELSESEKEEILSGFNAEHGEFIFKKEYAEGIKNKIRTVEWEPPEISEDEERKGEEI 512

Query: 229 DVRKKIEYSMQLNASRIKVLQAQ 297
            V   IE        R+K ++ +
Sbjct: 513 KVSDLIERFEDFEGRRVKRIKVK 535

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>GOGA6_HUMAN (Q9NYA3) Golgin subfamily A member 6 (Golgin linked to PML)|
           (Golgin-like protein)
          Length = 693

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 17/63 (26%), Positives = 31/63 (49%)
 Frame = +1

Query: 52  TDVSRQIQQMVRFIRQEA*EKAGEISVSAEEEFNIEKLQLVEAEKKKITQEYERKEKQVD 231
           T V  Q+Q   + +RQE     G++    E   N + L L+  E+K+  QE E   ++ +
Sbjct: 294 TSVVEQLQDEAKHLRQEVEGLEGKLQSQVE---NNQALSLLSKEQKQRLQEQEEMLREQE 350

Query: 232 VRK 240
            ++
Sbjct: 351 AQR 353

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>CBPY_PICPA (P52710) Carboxypeptidase Y precursor (EC 3.4.16.5)|
           (Carboxypeptidase YSCY)
          Length = 523

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 14/48 (29%), Positives = 24/48 (50%)
 Frame = -2

Query: 152 LNSSSAETEISPAFS*ASWRMNRTICWICLETSVSFILASAAADLTIV 9
           L SS     + P F+  SW  N +I ++    +V F  +S++   T+V
Sbjct: 172 LGSSRINENLKPIFNPYSWNGNASIIYLDQPVNVGFSYSSSSVSNTVV 219

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>Y3404_METJA (Q60303) Hypothetical protein MJECS04|
          Length = 135

 Score = 27.7 bits (60), Expect = 7.8
 Identities = 13/40 (32%), Positives = 26/40 (65%), Gaps = 8/40 (20%)
 Frame = +1

Query: 154 IEKLQLVEAEKKKITQEYERKEKQVD--------VRKKIE 249
           IEK++ +E E+K+I + +E+  K++D        ++K+IE
Sbjct: 16  IEKIEELEGERKEIFENFEKLNKKLDNFENELNFIKKEIE 55

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>MNN4_YEAST (P36044) Protein MNN4|
          Length = 1178

 Score = 27.7 bits (60), Expect = 7.8
 Identities = 18/51 (35%), Positives = 29/51 (56%)
 Frame = +1

Query: 97   QEA*EKAGEISVSAEEEFNIEKLQLVEAEKKKITQEYERKEKQVDVRKKIE 249
            +E  +K  E     EEE   EK +  E EKKK  +E ++K+++ + +KK E
Sbjct: 1056 EEKKKKEEEEKKKKEEE---EKKKKEEEEKKKKEEEEKKKQEEEEKKKKEE 1103

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>NOP58_YEAST (Q12499) Nucleolar protein NOP58 (Nucleolar protein NOP5)|
          Length = 511

 Score = 27.7 bits (60), Expect = 7.8
 Identities = 18/73 (24%), Positives = 39/73 (53%)
 Frame = +1

Query: 25  AAADAKMNDTDVSRQIQQMVRFIRQEA*EKAGEISVSAEEEFNIEKLQLVEAEKKKITQE 204
           AA+D++ +  D   + ++     R+   ++  + S  A++E   +K +  + EKK+  ++
Sbjct: 436 AASDSESDSDDEEEEKKEKKEKKRKRDDDEDSKDSKKAKKEKKDKKEKKEKKEKKEKKEK 495

Query: 205 YERKEKQVDVRKK 243
            E+KEK+    KK
Sbjct: 496 KEKKEKKSKKEKK 508

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>Y3012_CLOPE (Q93MD5) Hypothetical protein PCP12|
          Length = 161

 Score = 27.7 bits (60), Expect = 7.8
 Identities = 18/80 (22%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
 Frame = +1

Query: 55  DVSRQIQQMVRFIRQEA*EKAGEISVSAEEEFNIEK-LQLVEAEKKKITQEYERKEKQVD 231
           ++ ++ Q   + I++E  E   E+SV+ +E+F  +  + +++++ +   ++ E K+KQ+ 
Sbjct: 50  ELEKKKQLTPKEIKKETTEIQHEVSVTVDEDFLYQNTINILQSQIENRDKQIEFKDKQIS 109

Query: 232 VRKKIEYSMQLNASRIKVLQ 291
           +   I   ++ N   IK L+
Sbjct: 110 ILNTI---IENNLKIIKQLE 126

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>RAD50_SCHPO (Q9UTJ8) DNA repair protein rad50 (EC 3.6.-.-)|
          Length = 1290

 Score = 27.7 bits (60), Expect = 7.8
 Identities = 14/50 (28%), Positives = 28/50 (56%)
 Frame = +1

Query: 139 EEEFNIEKLQLVEAEKKKITQEYERKEKQVDVRKKIEYSMQLNASRIKVL 288
           ++ +N E  +LVE  +KK+ ++ E +     VR+++E  + L+   I  L
Sbjct: 563 DDNYNEELDKLVEDVRKKLQEKEEAESSLRSVRERLEIRISLSVQSINDL 612

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>SSY1_YEAST (Q03770) Putative amino-acid permease SSY1|
          Length = 852

 Score = 27.7 bits (60), Expect = 7.8
 Identities = 18/75 (24%), Positives = 35/75 (46%), Gaps = 5/75 (6%)
 Frame = +1

Query: 13  IVRSAAADAKMNDTDVSRQIQQMVRFIRQEA*EKAGEISVS-----AEEEFNIEKLQLVE 177
           I++S   +   ND ++ R   Q  RF   +   K   +++       EE+   E +Q  +
Sbjct: 52  ILKSIIEEQGWNDAELYRSSIQNQRFFLTDKYTKKKHLTMEDMLSPEEEQIYQEPIQDFQ 111

Query: 178 AEKKKITQEYERKEK 222
              K++ +EYE +E+
Sbjct: 112 TYNKRVQREYELRER 126

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>RRF_THET8 (Q9WX76) Ribosome recycling factor (Ribosome-releasing factor)|
           (RRF)
          Length = 185

 Score = 27.7 bits (60), Expect = 7.8
 Identities = 18/56 (32%), Positives = 33/56 (58%)
 Frame = +1

Query: 82  VRFIRQEA*EKAGEISVSAEEEFNIEKLQLVEAEKKKITQEYERKEKQVDVRKKIE 249
           +R IR+EA +K  +++   E   + ++ +  EAE +KIT E+  K  Q+  +K+ E
Sbjct: 129 IRNIRREALDKLKKLA--KELHLSEDETKRAEAEIQKITDEFIAKADQLAEKKEQE 182

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>RRF_THET2 (Q72KE0) Ribosome recycling factor (Ribosome-releasing factor)|
           (RRF)
          Length = 185

 Score = 27.7 bits (60), Expect = 7.8
 Identities = 18/56 (32%), Positives = 33/56 (58%)
 Frame = +1

Query: 82  VRFIRQEA*EKAGEISVSAEEEFNIEKLQLVEAEKKKITQEYERKEKQVDVRKKIE 249
           +R IR+EA +K  +++   E   + ++ +  EAE +KIT E+  K  Q+  +K+ E
Sbjct: 129 IRNIRREALDKLKKLA--KELHLSEDETKRAEAEIQKITDEFIAKADQLAEKKEQE 182

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>UTP9_YEAST (P38882) U3 small nucleolar RNA-associated protein 9 (U3|
           snoRNA-associated protein 9)
          Length = 575

 Score = 27.7 bits (60), Expect = 7.8
 Identities = 17/66 (25%), Positives = 34/66 (51%), Gaps = 9/66 (13%)
 Frame = +1

Query: 109 EKAGEISVSAEEEFNIEKLQLVEAEKKKITQ---------EYERKEKQVDVRKKIEYSMQ 261
           E  G I+++  E+ N +     EA++KK+ +         ++E+KE +  + KK+  S Q
Sbjct: 330 ETQGYITINKNEKNNAD-----EADQKKLEEKEEEAQPEVQHEKKETETKINKKVSKSDQ 384

Query: 262 LNASRI 279
           +  + I
Sbjct: 385 VEIANI 390

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>DC1I1_RAT (Q63100) Cytoplasmic dynein 1 intermediate chain 1 (Dynein|
           intermediate chain 1, cytosolic) (DH IC-1) (Cytoplasmic
           dynein intermediate chain 1)
          Length = 643

 Score = 27.7 bits (60), Expect = 7.8
 Identities = 15/40 (37%), Positives = 26/40 (65%)
 Frame = +1

Query: 130 VSAEEEFNIEKLQLVEAEKKKITQEYERKEKQVDVRKKIE 249
           + AE E   ++L  +  EKK+  +E ERK+K+ D+++K E
Sbjct: 7   LKAELERKKQRLAQIREEKKR--KEEERKKKEADMQQKKE 44

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>DC1I1_MOUSE (O88485) Cytoplasmic dynein 1 intermediate chain 1 (Dynein|
           intermediate chain 1, cytosolic) (DH IC-1) (Cytoplasmic
           dynein intermediate chain 1)
          Length = 628

 Score = 27.7 bits (60), Expect = 7.8
 Identities = 15/40 (37%), Positives = 26/40 (65%)
 Frame = +1

Query: 130 VSAEEEFNIEKLQLVEAEKKKITQEYERKEKQVDVRKKIE 249
           + AE E   ++L  +  EKK+  +E ERK+K+ D+++K E
Sbjct: 7   LKAELERKKQRLAQIREEKKR--KEEERKKKEADMQQKKE 44

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>MRCKA_RAT (O54874) Serine/threonine-protein kinase MRCK alpha (EC 2.7.11.1)|
           (CDC42-binding protein kinase alpha) (Myotonic dystrophy
           kinase-related CDC42-binding kinase alpha) (Myotonic
           dystrophy protein kinase-like alpha) (MRCK alpha)
          Length = 1732

 Score = 27.7 bits (60), Expect = 7.8
 Identities = 17/58 (29%), Positives = 27/58 (46%)
 Frame = +1

Query: 109 EKAGEISVSAEEEFNIEKLQLVEAEKKKITQEYERKEKQVDVRKKIEYSMQLNASRIK 282
           EK    S S  EEF  E  Q  E EK  +T+E ++   ++D    +  S+ L    ++
Sbjct: 744 EKTRRESQSEREEFENEFKQQYEREKVLLTEENKKLTSELDKLTSLYESLSLRNQHLE 801

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>DC1I1_HUMAN (O14576) Cytoplasmic dynein 1 intermediate chain 1 (Dynein|
           intermediate chain 1, cytosolic) (DH IC-1) (Cytoplasmic
           dynein intermediate chain 1)
          Length = 645

 Score = 27.7 bits (60), Expect = 7.8
 Identities = 15/40 (37%), Positives = 26/40 (65%)
 Frame = +1

Query: 130 VSAEEEFNIEKLQLVEAEKKKITQEYERKEKQVDVRKKIE 249
           + AE E   ++L  +  EKK+  +E ERK+K+ D+++K E
Sbjct: 7   LKAELERKKQRLAQIREEKKR--KEEERKKKEADMQQKKE 44


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.317    0.128    0.318 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,084,647
Number of Sequences: 219361
Number of extensions: 340721
Number of successful extensions: 2037
Number of sequences better than 10.0: 70
Number of HSP's better than 10.0 without gapping: 1876
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1998
length of database: 80,573,946
effective HSP length: 74
effective length of database: 64,341,232
effective search space used: 1544189568
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result