ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart45a06 |
|---|---|
| Clone Library Name | barley_pub |
>gb|U84269.1|HVU84269 Hordeum vulgare vacuolar proton-translocating ATPase subunit E (Ylp) mRNA, complete cds Length = 1057 Score = 565 bits (285), Expect = e-158 Identities = 294/297 (98%) Strand = Plus / Plus Query: 1 cacagtcgaacgatcgtcagatccgccgccgccgacgccaagatgaacgacaccgatgtc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94 cacagtcgaacgatcgtcagatccgccgccgccgacgccaagatgaacgacaccgatgtc 153 Query: 61 tccaggcagatccaacagatggtgcggttcatccgccaggaggcctaggagaaggctggc 120 |||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 154 tccaggcagatccagcagatggtgcggttcatccgccaggaggccgaggagaaggctggc 213 Query: 121 gagatctccgtctccgccgaggaggaattcaacattgagaagctgcaacttgttgaagct 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 214 gagatctccgtctccgccgaggaggaattcaacattgagaagctgcaacttgttgaagct 273 Query: 181 gagaaaaagaagatcacacaagaatatgagcggaaagagaagcaggttgatgttcggaag 240 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 274 gagaaaaagaagatcagacaagaatatgagcggaaagagaagcaggttgatgttcggaag 333 Query: 241 aaaattgagtactctatgcagctgaatgcttcccgtatcaaagtgcttcaggcccag 297 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 334 aaaattgagtactctatgcagctgaatgcttcccgtatcaaagtgcttcaggcccag 390
>gb|U84268.1|HVU84268 Hordeum vulgare vacuolar proton-translocating ATPase subunit E (Ylp) mRNA, complete cds Length = 1012 Score = 565 bits (285), Expect = e-158 Identities = 294/297 (98%) Strand = Plus / Plus Query: 1 cacagtcgaacgatcgtcagatccgccgccgccgacgccaagatgaacgacaccgatgtc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94 cacagtcgaacgatcgtcagatccgccgccgccgacgccaagatgaacgacaccgatgtc 153 Query: 61 tccaggcagatccaacagatggtgcggttcatccgccaggaggcctaggagaaggctggc 120 |||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 154 tccaggcagatccagcagatggtgcggttcatccgccaggaggccgaggagaaggctggc 213 Query: 121 gagatctccgtctccgccgaggaggaattcaacattgagaagctgcaacttgttgaagct 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 214 gagatctccgtctccgccgaggaggaattcaacattgagaagctgcaacttgttgaagct 273 Query: 181 gagaaaaagaagatcacacaagaatatgagcggaaagagaagcaggttgatgttcggaag 240 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 274 gagaaaaagaagatcagacaagaatatgagcggaaagagaagcaggttgatgttcggaag 333 Query: 241 aaaattgagtactctatgcagctgaatgcttcccgtatcaaagtgcttcaggcccag 297 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 334 aaaattgagtactctatgcagctgaatgcttcccgtatcaaagtgcttcaggcccag 390
>emb|Z33632.1|HVATPAX H.vulgare (Gerbel) mRNA for adenosine triphosphatase Length = 1034 Score = 541 bits (273), Expect = e-151 Identities = 291/297 (97%) Strand = Plus / Plus Query: 1 cacagtcgaacgatcgtcagatccgccgccgccgacgccaagatgaacgacaccgatgtc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 54 cacagtcgaacgatcgtcagatccgccgccgccgacgccaagatgaacgacaccgatgtc 113 Query: 61 tccaggcagatccaacagatggtgcggttcatccgccaggaggcctaggagaaggctggc 120 |||||||||||||| |||||||||||||||||||||||||||||| ||||| ||| ||| Sbjct: 114 tccaggcagatccagcagatggtgcggttcatccgccaggaggccgaggagccggccggc 173 Query: 121 gagatctccgtctccgccgaggaggaattcaacattgagaagctgcaacttgttgaagct 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 174 gagatctccgtctccgccgaggaggaattcaacattgagaagctgcaacttgttgaagct 233 Query: 181 gagaaaaagaagatcacacaagaatatgagcggaaagagaagcaggttgatgttcggaag 240 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 234 gagaaaaagaagatcagacaagaatatgagcggaaagagaagcaggttgatgttcggaag 293 Query: 241 aaaattgagtactctatgcagctgaatgcttcccgtatcaaagtgcttcaggcccag 297 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 294 aaaattgagtactctatgcagctgaatgcttcccgtatcaaagtgcttcaggcccag 350
>gb|DQ344624.1| Triticum aestivum vacuolar ATP synthase subunit E (VATE) mRNA, complete cds Length = 1970 Score = 502 bits (253), Expect = e-139 Identities = 286/297 (96%) Strand = Plus / Plus Query: 1 cacagtcgaacgatcgtcagatccgccgccgccgacgccaagatgaacgacaccgatgtc 60 |||||||| || |||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 103 cacagtcggacaatcgtcagatccgccgccgccgacgccacgatgaacgacaccgatgtc 162 Query: 61 tccaggcagatccaacagatggtgcggttcatccgccaggaggcctaggagaaggctggc 120 |||| ||||||||| |||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 163 tccaagcagatccagcagatggtgcggttcatccgccaggaggccgaggagaaggctggc 222 Query: 121 gagatctccgtctccgccgaggaggaattcaacattgagaagctgcaacttgttgaagct 180 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 223 gagatctccgtctccgctgaggaggaattcaacattgagaagctgcaacttgttgaagct 282 Query: 181 gagaaaaagaagatcacacaagaatatgagcggaaagagaagcaggttgatgttcggaag 240 |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 283 gagaaaaagaagatcaggcaagaatatgagcggaaagagaagcaggttgatgttcggaag 342 Query: 241 aaaattgagtactctatgcagctgaatgcttcccgtatcaaagtgcttcaggcccag 297 |||||||||||||||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 343 aaaattgagtactctatgcagctgaatgcttctcgcatcaaagtgcttcaggcccag 399
>gb|DQ272489.1| Triticum aestivum vacuolar proton ATPase subunit E mRNA, complete cds Length = 742 Score = 494 bits (249), Expect = e-137 Identities = 276/285 (96%) Strand = Plus / Plus Query: 13 atcgtcagatccgccgccgccgacgccaagatgaacgacaccgatgtctccaggcagatc 72 |||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||| Sbjct: 4 atcgtcagatccgccgccgcgtacgccaagatgaacgacaccgatgtctccaagcagatc 63 Query: 73 caacagatggtgcggttcatccgccaggaggcctaggagaaggctggcgagatctccgtc 132 || |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 64 cagcagatggtgcggttcatccgccaggaggccgaggagaaggctggcgagatctccgtc 123 Query: 133 tccgccgaggaggaattcaacattgagaagctgcaacttgttgaagctgagaaaaagaag 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124 tccgccgaggaggaattcaacattgagaagctgcaacttgttgaagctgagaaaaagaag 183 Query: 193 atcacacaagaatatgagcggaaagagaagcaggttgatgttcggaagaaaattgagtac 252 |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184 atcaggcaagaatatgagcggaaagagaagcaggttgatgttcggaagaaaattgagtac 243 Query: 253 tctatgcagctgaatgcttcccgtatcaaagtgcttcaggcccag 297 |||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 244 tctatgcagctgaatgcttctcgcatcaaagtgcttcaggcccag 288
>dbj|AK071200.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023086K07, full insert sequence Length = 1134 Score = 353 bits (178), Expect = 2e-94 Identities = 241/262 (91%) Strand = Plus / Plus Query: 29 ccgccgacgccaagatgaacgacaccgatgtctccaggcagatccaacagatggtgcggt 88 |||||| |||||||||||||||| |||||||| ||| ||||||||| ||||||||||||| Sbjct: 187 ccgccgccgccaagatgaacgacgccgatgtcgccaagcagatccagcagatggtgcggt 246 Query: 89 tcatccgccaggaggcctaggagaaggctggcgagatctccgtctccgccgaggaggaat 148 ||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| | Sbjct: 247 tcatccgccaggaggccgaggagaaggccagcgagatctccgtctccgccgaggaggagt 306 Query: 149 tcaacattgagaagctgcaacttgttgaagctgagaaaaagaagatcacacaagaatatg 208 |||| ||||||||||| ||||||||||||||||||||||||||||||| |||||||||| Sbjct: 307 tcaatattgagaagcttcaacttgttgaagctgagaaaaagaagatcaggcaagaatatg 366 Query: 209 agcggaaagagaagcaggttgatgttcggaagaaaattgagtactctatgcagctgaatg 268 | |||||||||||||| || || ||| | ||||||||||||||||||||||||||||||| Sbjct: 367 aacggaaagagaagcaagtcgaagttagaaagaaaattgagtactctatgcagctgaatg 426 Query: 269 cttcccgtatcaaagtgcttca 290 |||| || |||||||||||||| Sbjct: 427 cttctcgcatcaaagtgcttca 448
>ref|NM_192458.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 693 Score = 333 bits (168), Expect = 2e-88 Identities = 228/248 (91%) Strand = Plus / Plus Query: 43 atgaacgacaccgatgtctccaggcagatccaacagatggtgcggttcatccgccaggag 102 ||||||||| |||||||| ||| ||||||||| ||||||||||||||||||||||||||| Sbjct: 1 atgaacgacgccgatgtcgccaagcagatccagcagatggtgcggttcatccgccaggag 60 Query: 103 gcctaggagaaggctggcgagatctccgtctccgccgaggaggaattcaacattgagaag 162 ||| |||||||||| |||||||||||||||||||||||||||| ||||| ||||||||| Sbjct: 61 gccgaggagaaggccagcgagatctccgtctccgccgaggaggagttcaatattgagaag 120 Query: 163 ctgcaacttgttgaagctgagaaaaagaagatcacacaagaatatgagcggaaagagaag 222 || ||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| Sbjct: 121 cttcaacttgttgaagctgagaaaaagaagatcaggcaagaatatgaacggaaagagaag 180 Query: 223 caggttgatgttcggaagaaaattgagtactctatgcagctgaatgcttcccgtatcaaa 282 || || || ||| | ||||||||||||||||||||||||||||||||||| || |||||| Sbjct: 181 caagtcgaagttagaaagaaaattgagtactctatgcagctgaatgcttctcgcatcaaa 240 Query: 283 gtgcttca 290 |||||||| Sbjct: 241 gtgcttca 248
>gb|AF152600.1|AF152600 Zea mays unknown mRNA Length = 497 Score = 329 bits (166), Expect = 3e-87 Identities = 238/262 (90%) Strand = Plus / Plus Query: 29 ccgccgacgccaagatgaacgacaccgatgtctccaggcagatccaacagatggtgcggt 88 |||||| |||||||||||| ||| ||||||| ||| ||||||||| ||||||||||||| Sbjct: 99 ccgccgccgccaagatgaatgacgccgatgtagccaagcagatccagcagatggtgcggt 158 Query: 89 tcatccgccaggaggcctaggagaaggctggcgagatctccgtctccgccgaggaggaat 148 ||||||||||||||||| | |||||||| ||||||||||||||||||||||||||||| Sbjct: 159 tcatccgccaggaggccgacgagaaggccaacgagatctccgtctccgccgaggaggaat 218 Query: 149 tcaacattgagaagctgcaacttgttgaagctgagaaaaagaagatcacacaagaatatg 208 ||||||||||||||||||| |||||||||||||||||||||||||| | |||||| |||| Sbjct: 219 tcaacattgagaagctgcagcttgttgaagctgagaaaaagaagattagacaagagtatg 278 Query: 209 agcggaaagagaagcaggttgatgttcggaagaaaattgagtactctatgcagctgaatg 268 | || ||||||||||||||||| || ||||||||||||||||||||||||||| |||||| Sbjct: 279 aacgcaaagagaagcaggttgaagtacggaagaaaattgagtactctatgcagttgaatg 338 Query: 269 cttcccgtatcaaagtgcttca 290 |||| || |||||||| ||||| Sbjct: 339 cttctcgcatcaaagttcttca 360
>gb|AY104382.1| Zea mays PCO079851 mRNA sequence Length = 1233 Score = 313 bits (158), Expect = 2e-82 Identities = 236/262 (90%) Strand = Plus / Plus Query: 29 ccgccgacgccaagatgaacgacaccgatgtctccaggcagatccaacagatggtgcggt 88 |||||| |||||||||||| ||| ||||||| ||| ||||||||| ||||||||||||| Sbjct: 177 ccgccgccgccaagatgaatgacgccgatgtagccaagcagatccagcagatggtgcggt 236 Query: 89 tcatccgccaggaggcctaggagaaggctggcgagatctccgtctccgccgaggaggaat 148 ||||||||||||||||| | |||||||| ||||||||||||||||||||||||||||| Sbjct: 237 tcatccgccaggaggccgacgagaaggccaacgagatctccgtctccgccgaggaggaat 296 Query: 149 tcaacattgagaagctgcaacttgttgaagctgagaaaaagaagatcacacaagaatatg 208 |||||||||||||| |||| |||||||||||||||||||||||||| | |||||| |||| Sbjct: 297 tcaacattgagaagttgcagcttgttgaagctgagaaaaagaagattagacaagagtatg 356 Query: 209 agcggaaagagaagcaggttgatgttcggaagaaaattgagtactctatgcagctgaatg 268 | || ||||||||||||||||| || || |||||||||||||||||||||||| |||||| Sbjct: 357 aacgcaaagagaagcaggttgaagtacgcaagaaaattgagtactctatgcagttgaatg 416 Query: 269 cttcccgtatcaaagtgcttca 290 |||| || |||||||| ||||| Sbjct: 417 cttctcgcatcaaagttcttca 438
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 168 bits (85), Expect = 6e-39 Identities = 109/117 (93%) Strand = Plus / Plus Query: 29 ccgccgacgccaagatgaacgacaccgatgtctccaggcagatccaacagatggtgcggt 88 |||||| |||||||||||||||| |||||||| ||| ||||||||| ||||||||||||| Sbjct: 26805315 ccgccgccgccaagatgaacgacgccgatgtcgccaagcagatccagcagatggtgcggt 26805374 Query: 89 tcatccgccaggaggcctaggagaaggctggcgagatctccgtctccgccgaggagg 145 ||||||||||||||||| |||||||||| ||||||||||||||||||||||||||| Sbjct: 26805375 tcatccgccaggaggccgaggagaaggccagcgagatctccgtctccgccgaggagg 26805431 Score = 117 bits (59), Expect = 2e-23 Identities = 92/103 (89%) Strand = Plus / Plus Query: 143 aggaattcaacattgagaagctgcaacttgttgaagctgagaaaaagaagatcacacaag 202 |||| ||||| ||||||||||| ||||||||||||||||||||||||||||||| |||| Sbjct: 26807128 aggagttcaatattgagaagcttcaacttgttgaagctgagaaaaagaagatcaggcaag 26807187 Query: 203 aatatgagcggaaagagaagcaggttgatgttcggaagaaaat 245 ||||||| |||||||||||||| || || ||| | |||||||| Sbjct: 26807188 aatatgaacggaaagagaagcaagtcgaagttagaaagaaaat 26807230 Score = 73.8 bits (37), Expect = 3e-10 Identities = 43/45 (95%) Strand = Plus / Plus Query: 246 tgagtactctatgcagctgaatgcttcccgtatcaaagtgcttca 290 ||||||||||||||||||||||||||| || |||||||||||||| Sbjct: 26807876 tgagtactctatgcagctgaatgcttctcgcatcaaagtgcttca 26807920
>dbj|AP003291.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0684E06 Length = 147004 Score = 168 bits (85), Expect = 6e-39 Identities = 109/117 (93%) Strand = Plus / Plus Query: 29 ccgccgacgccaagatgaacgacaccgatgtctccaggcagatccaacagatggtgcggt 88 |||||| |||||||||||||||| |||||||| ||| ||||||||| ||||||||||||| Sbjct: 40964 ccgccgccgccaagatgaacgacgccgatgtcgccaagcagatccagcagatggtgcggt 41023 Query: 89 tcatccgccaggaggcctaggagaaggctggcgagatctccgtctccgccgaggagg 145 ||||||||||||||||| |||||||||| ||||||||||||||||||||||||||| Sbjct: 41024 tcatccgccaggaggccgaggagaaggccagcgagatctccgtctccgccgaggagg 41080 Score = 117 bits (59), Expect = 2e-23 Identities = 92/103 (89%) Strand = Plus / Plus Query: 143 aggaattcaacattgagaagctgcaacttgttgaagctgagaaaaagaagatcacacaag 202 |||| ||||| ||||||||||| ||||||||||||||||||||||||||||||| |||| Sbjct: 42777 aggagttcaatattgagaagcttcaacttgttgaagctgagaaaaagaagatcaggcaag 42836 Query: 203 aatatgagcggaaagagaagcaggttgatgttcggaagaaaat 245 ||||||| |||||||||||||| || || ||| | |||||||| Sbjct: 42837 aatatgaacggaaagagaagcaagtcgaagttagaaagaaaat 42879 Score = 73.8 bits (37), Expect = 3e-10 Identities = 43/45 (95%) Strand = Plus / Plus Query: 246 tgagtactctatgcagctgaatgcttcccgtatcaaagtgcttca 290 ||||||||||||||||||||||||||| || |||||||||||||| Sbjct: 43525 tgagtactctatgcagctgaatgcttctcgcatcaaagtgcttca 43569
>emb|X92118.1|MCVATPASE M.crystallinum mRNA for vacuolar proton ATPase subunit E Length = 1070 Score = 168 bits (85), Expect = 6e-39 Identities = 211/253 (83%) Strand = Plus / Plus Query: 38 ccaagatgaacgacaccgatgtctccaggcagatccaacagatggtgcggttcatccgcc 97 |||| |||||||||||||||||| | |||||||| |||||||| | ||||| |||| Sbjct: 71 ccaaaatgaacgacaccgatgtccaaaaccagatccagcagatggtcagattcatgcgcc 130 Query: 98 aggaggcctaggagaaggctggcgagatctccgtctccgccgaggaggaattcaacattg 157 | || || |||||||||| ||||||||| ||||| ||||| || ||||||||||||| Sbjct: 131 aagaagcggaggagaaggccaacgagatctctgtctctgccgaagaagaattcaacattg 190 Query: 158 agaagctgcaacttgttgaagctgagaaaaagaagatcacacaagaatatgagcggaaag 217 ||||| ||||| | |||||||| ||||| |||||||||| ||||| |||||||| || | Sbjct: 191 agaagttgcaattagttgaagcggagaagaagaagatcaggcaagagtatgagcgcaagg 250 Query: 218 agaagcaggttgatgttcggaagaaaattgagtactctatgcagctgaatgcttcccgta 277 |||||| || || ||||||| |||||||||||||||||||||||| |||||||| || | Sbjct: 251 cgaagcaagtggacgttcggaggaaaattgagtactctatgcagctcaatgcttctcgga 310 Query: 278 tcaaagtgcttca 290 |||| || ||||| Sbjct: 311 tcaaggttcttca 323
>gb|AF165939.1|AF165939 Citrus limon vacuolar V-H+ATPase subunit E mRNA, complete cds Length = 1057 Score = 167 bits (84), Expect = 3e-38 Identities = 207/248 (83%) Strand = Plus / Plus Query: 43 atgaacgacaccgatgtctccaggcagatccaacagatggtgcggttcatccgccaggag 102 ||||||||| ||||||| || | ||||||||| |||||||||||||| |||||||| || Sbjct: 123 atgaacgacgccgatgtttcgaagcagatccagcagatggtgcggtttatccgccaagaa 182 Query: 103 gcctaggagaaggctggcgagatctccgtctccgccgaggaggaattcaacattgagaag 162 ||| | ||||| || ||||||||| || || ||||| || ||||||||||| |||||| Sbjct: 183 gccgaagagaaagccaacgagatctcagtttctgccgaagaagaattcaacatagagaag 242 Query: 163 ctgcaacttgttgaagctgagaaaaagaagatcacacaagaatatgagcggaaagagaag 222 |||| || || ||||| ||||| |||||||||| |||||| || ||||||||||||||| Sbjct: 243 ttgcagctggtggaagcagagaagaagaagatcagacaagagtacgagcggaaagagaag 302 Query: 223 caggttgatgttcggaagaaaattgagtactctatgcagctgaatgcttcccgtatcaaa 282 || || || | | ||||| ||||||||||| ||||||||||||||||| || |||||| Sbjct: 303 caagtcgaaatcagaaagaagattgagtactccatgcagctgaatgcttctcggatcaaa 362 Query: 283 gtgcttca 290 || ||||| Sbjct: 363 gttcttca 370
>dbj|AB037106.1| Citrus unshiu Cit-VATP E-1 mRNA for vacuolar H+-ATPase E subunit-1, complete cds Length = 990 Score = 159 bits (80), Expect = 6e-36 Identities = 206/248 (83%) Strand = Plus / Plus Query: 43 atgaacgacaccgatgtctccaggcagatccaacagatggtgcggttcatccgccaggag 102 ||||||||| | ||||| || | ||||||||| |||||||||||||| |||||||| || Sbjct: 61 atgaacgacgctgatgtttcgaagcagatccagcagatggtgcggtttatccgccaagaa 120 Query: 103 gcctaggagaaggctggcgagatctccgtctccgccgaggaggaattcaacattgagaag 162 ||| | ||||| || ||||||||| || || ||||| || ||||||||||| |||||| Sbjct: 121 gccgaagagaaagccaacgagatctcagtttctgccgaagaagaattcaacatagagaag 180 Query: 163 ctgcaacttgttgaagctgagaaaaagaagatcacacaagaatatgagcggaaagagaag 222 |||| || || ||||| ||||| |||||||||| |||||| || ||||||||||||||| Sbjct: 181 ttgcagctggtggaagcagagaagaagaagatcagacaagagtacgagcggaaagagaag 240 Query: 223 caggttgatgttcggaagaaaattgagtactctatgcagctgaatgcttcccgtatcaaa 282 || || || | | ||||| ||||||||||| ||||||||||||||||| || |||||| Sbjct: 241 caagtcgaaatcagaaagaagattgagtactccatgcagctgaatgcttctcggatcaaa 300 Query: 283 gtgcttca 290 || ||||| Sbjct: 301 gttcttca 308
>gb|BT014457.1| Lycopersicon esculentum clone 133804F, mRNA sequence Length = 1142 Score = 155 bits (78), Expect = 1e-34 Identities = 147/170 (86%) Strand = Plus / Plus Query: 121 gagatctccgtctccgccgaggaggaattcaacattgagaagctgcaacttgttgaagct 180 |||||||||||||||||||| || |||||||||||||||||| |||| || || ||||| Sbjct: 244 gagatctccgtctccgccgaagaagaattcaacattgagaagttgcagctagtggaagca 303 Query: 181 gagaaaaagaagatcacacaagaatatgagcggaaagagaagcaggttgatgttcggaag 240 |||||||||||||||| ||| ||||| ||||| || ||||| || ||||||||||| ||| Sbjct: 304 gagaaaaagaagatcagacaggaatacgagcgtaaggagaaacaagttgatgttcgcaag 363 Query: 241 aaaattgagtactctatgcagctgaatgcttcccgtatcaaagtgcttca 290 |||||||||||||| ||||| || ||||| || || ||||| || ||||| Sbjct: 364 aaaattgagtactccatgcaactcaatgcctctcgaatcaaggttcttca 413
>gb|AF499722.1| Thellungiella halophila vacuolar ATPase subunit E-like protein mRNA, complete cds Length = 1023 Score = 135 bits (68), Expect = 9e-29 Identities = 194/236 (82%) Strand = Plus / Plus Query: 55 gatgtctccaggcagatccaacagatggtgcggttcatccgccaggaggcctaggagaag 114 ||||| || ||||||||||| ||||||||| | || |||||||| ||||| |||||||| Sbjct: 95 gatgtgtcgaggcagatccagcagatggtgagatttatccgccaagaggcggaggagaag 154 Query: 115 gctggcgagatctccgtctccgccgaggaggaattcaacattgagaagctgcaacttgtt 174 || ||||||||| |||||||| || || ||||||||||| ||||| ||||| || ||| Sbjct: 155 gcaaacgagatctcggtctccgctgaagaagaattcaacatcgagaaactgcagctagtt 214 Query: 175 gaagctgagaaaaagaagatcacacaagaatatgagcggaaagagaagcaggttgatgtt 234 || || ||||| |||||||||| ||||| |||||| ||| |||||||| | ||| || Sbjct: 215 gaggcggagaagaagaagatcaggcaagattatgagaagaaggagaagcaagctgacgtg 274 Query: 235 cggaagaaaattgagtactctatgcagctgaatgcttcccgtatcaaagtgcttca 290 || ||||| ||||| ||||| |||||||| |||||||| | |||||||| ||||| Sbjct: 275 cgcaagaagattgattactcgatgcagctaaatgcttcaaggatcaaagttcttca 330
>ref|NM_105094.1| Arabidopsis thaliana VHA-E3; hydrogen-transporting ATP synthase, rotational mechanism / hydrogen-transporting ATPase, rotational mechanism AT1G64200 (VHA-E3) mRNA, complete cds Length = 714 Score = 127 bits (64), Expect = 2e-26 Identities = 184/224 (82%) Strand = Plus / Plus Query: 43 atgaacgacaccgatgtctccaggcagatccaacagatggtgcggttcatccgccaggag 102 ||||||||| |||||| |||| |||||||| |||||||| |||| ||||||||||| Sbjct: 1 atgaacgacgccgatgcttccatccagatccagcagatggttaggtttatccgccaggaa 60 Query: 103 gcctaggagaaggctggcgagatctccgtctccgccgaggaggaattcaacattgagaag 162 ||| | || |||||| |||||||||| ||||| | || || ||||||||||||||||| Sbjct: 61 gccgaagaaaaggctaacgagatctccatctcctctgaagaagaattcaacattgagaaa 120 Query: 163 ctgcaacttgttgaagctgagaaaaagaagatcacacaagaatatgagcggaaagagaag 222 |||| ||||||||||| ||||| |||||||| | |||||| |||||| ||| ||||| Sbjct: 121 ttgcagcttgttgaagcagagaagaagaagattagacaagagtatgagaagaaggagaaa 180 Query: 223 caggttgatgttcggaagaaaattgagtactctatgcagctgaa 266 ||||| ||||| | ||||| ||||| ||||| ||||| ||||| Sbjct: 181 caggtcgatgtcagaaagaagattgattactcaatgcaactgaa 224
>emb|AJ245933.1|BVU245933 Beta vulgaris partial mRNA for V-type H(+)-ATPase subunit E Length = 558 Score = 127 bits (64), Expect = 2e-26 Identities = 169/204 (82%) Strand = Plus / Plus Query: 66 gcagatccaacagatggtgcggttcatccgccaggaggcctaggagaaggctggcgagat 125 ||||||||| |||||||| | ||||||||||| || || ||||||| ||| ||||| Sbjct: 3 gcagatccagcagatggttagattcatccgccaagaagcggaggagaaagctaatgagat 62 Query: 126 ctccgtctccgccgaggaggaattcaacattgagaagctgcaacttgttgaagctgagaa 185 ||| || | || || ||||| || |||||||||||| |||| | |||||||| ||||| Sbjct: 63 ctctgttgctgctgaagaggagtttaacattgagaagttgcagttagttgaagcggagaa 122 Query: 186 aaagaagatcacacaagaatatgagcggaaagagaagcaggttgatgttcggaagaaaat 245 |||||||||| || || |||||||||||||||||||| |||||| |||| | |||||| Sbjct: 123 gaagaagatcaggcaggagtatgagcggaaagagaagcaagttgatattcgcaggaaaat 182 Query: 246 tgagtactctatgcagctgaatgc 269 |||||||||||||||||| ||||| Sbjct: 183 tgagtactctatgcagctcaatgc 206
>ref|NM_117185.3| Arabidopsis thaliana TUF (TUFF) AT4G11150 (TUF) mRNA, complete cds Length = 1057 Score = 119 bits (60), Expect = 5e-24 Identities = 192/236 (81%) Strand = Plus / Plus Query: 55 gatgtctccaggcagatccaacagatggtgcggttcatccgccaggaggcctaggagaag 114 ||||| || ||||||||||| ||||||||| | || |||||||| || || | ||||| Sbjct: 142 gatgtatcgaggcagatccagcagatggtgagatttatccgccaagaagcggaagagaaa 201 Query: 115 gctggcgagatctccgtctccgccgaggaggaattcaacattgagaagctgcaacttgtt 174 || ||||||||| || || || || || ||||||||||||||||| || || |||||| Sbjct: 202 gcaaacgagatctcggtttctgctgaagaagaattcaacattgagaaactccagcttgtt 261 Query: 175 gaagctgagaaaaagaagatcacacaagaatatgagcggaaagagaagcaggttgatgtt 234 || || ||||| |||||||||| ||||| |||||| ||| |||||||| | ||||||| Sbjct: 262 gaggcggagaagaagaagatcaggcaagattatgagaagaaggagaagcaagctgatgtt 321 Query: 235 cggaagaaaattgagtactctatgcagctgaatgcttcccgtatcaaagtgcttca 290 || ||||| ||||| |||||||||||||| ||||| || | |||||||| ||||| Sbjct: 322 cgcaagaagattgattactctatgcagctaaatgcatcaaggatcaaagttcttca 377
>gb|AY081632.1| Arabidopsis thaliana similar to vacuolar ATPases (F2P3.10) mRNA, complete cds Length = 876 Score = 119 bits (60), Expect = 5e-24 Identities = 192/236 (81%) Strand = Plus / Plus Query: 55 gatgtctccaggcagatccaacagatggtgcggttcatccgccaggaggcctaggagaag 114 ||||| || ||||||||||| ||||||||| | || |||||||| || || | ||||| Sbjct: 13 gatgtatcgaggcagatccagcagatggtgagatttatccgccaagaagcggaagagaaa 72 Query: 115 gctggcgagatctccgtctccgccgaggaggaattcaacattgagaagctgcaacttgtt 174 || ||||||||| || || || || || ||||||||||||||||| || || |||||| Sbjct: 73 gcaaacgagatctcggtttctgctgaagaagaattcaacattgagaaactccagcttgtt 132 Query: 175 gaagctgagaaaaagaagatcacacaagaatatgagcggaaagagaagcaggttgatgtt 234 || || ||||| |||||||||| ||||| |||||| ||| |||||||| | ||||||| Sbjct: 133 gaggcggagaagaagaagatcaggcaagattatgagaagaaggagaagcaagctgatgtt 192 Query: 235 cggaagaaaattgagtactctatgcagctgaatgcttcccgtatcaaagtgcttca 290 || ||||| ||||| |||||||||||||| ||||| || | |||||||| ||||| Sbjct: 193 cgcaagaagattgattactctatgcagctaaatgcatcaaggatcaaagttcttca 248
>gb|AY065119.1| Arabidopsis thaliana similar to vacuolar ATPases (F2P3.10) mRNA, complete cds Length = 1033 Score = 119 bits (60), Expect = 5e-24 Identities = 192/236 (81%) Strand = Plus / Plus Query: 55 gatgtctccaggcagatccaacagatggtgcggttcatccgccaggaggcctaggagaag 114 ||||| || ||||||||||| ||||||||| | || |||||||| || || | ||||| Sbjct: 142 gatgtatcgaggcagatccagcagatggtgagatttatccgccaagaagcggaagagaaa 201 Query: 115 gctggcgagatctccgtctccgccgaggaggaattcaacattgagaagctgcaacttgtt 174 || ||||||||| || || || || || ||||||||||||||||| || || |||||| Sbjct: 202 gcaaacgagatctcggtttctgctgaagaagaattcaacattgagaaactccagcttgtt 261 Query: 175 gaagctgagaaaaagaagatcacacaagaatatgagcggaaagagaagcaggttgatgtt 234 || || ||||| |||||||||| ||||| |||||| ||| |||||||| | ||||||| Sbjct: 262 gaggcggagaagaagaagatcaggcaagattatgagaagaaggagaagcaagctgatgtt 321 Query: 235 cggaagaaaattgagtactctatgcagctgaatgcttcccgtatcaaagtgcttca 290 || ||||| ||||| |||||||||||||| ||||| || | |||||||| ||||| Sbjct: 322 cgcaagaagattgattactctatgcagctaaatgcatcaaggatcaaagttcttca 377
>gb|AF009338.1|AF009338 Gossypium hirsutum vacuolar H+-ATPase subunit E mRNA, complete cds Length = 989 Score = 113 bits (57), Expect = 3e-22 Identities = 189/233 (81%) Strand = Plus / Plus Query: 37 gccaagatgaacgacaccgatgtctccaggcagatccaacagatggtgcggttcatccgc 96 ||||| |||| |||| | ||||| |||| ||||||||| ||||||||| | ||||||||| Sbjct: 18 gccaaaatgagcgacgctgatgtatccaagcagatccagcagatggtgagattcatccgc 77 Query: 97 caggaggcctaggagaaggctggcgagatctccgtctccgccgaggaggaattcaacatt 156 ||||| || |||| |||||| ||||||||| || ||||| || ||||| |||||||| Sbjct: 78 caggaagcggaggaaaaggctaacgagatctctgtttccgctgaagaggagttcaacatc 137 Query: 157 gagaagctgcaacttgttgaagctgagaaaaagaagatcacacaagaatatgagcggaaa 216 |||||||| ||| | || ||||| ||||| |||||||| | || || || ||| ||| Sbjct: 138 gagaagcttcaattggtggaagcggagaagaagaagattaggcaggagtacgagaagaag 197 Query: 217 gagaagcaggttgatgttcggaagaaaattgagtactctatgcagctgaatgc 269 |||||||| ||||| | || |||||||||||||| || |||||||| ||||| Sbjct: 198 gagaagcaagttgaaatccgaaagaaaattgagtattcgatgcagcttaatgc 250
>gb|BT013542.1| Lycopersicon esculentum clone 132262F, mRNA sequence Length = 936 Score = 111 bits (56), Expect = 1e-21 Identities = 191/236 (80%) Strand = Plus / Plus Query: 55 gatgtctccaggcagatccaacagatggtgcggttcatccgccaggaggcctaggagaag 114 ||||| |||| ||||||||| |||||||| | ||||||||||| || || |||||||| Sbjct: 104 gatgtgtccaagcagatccatcagatggtcagattcatccgccaagaagcggaggagaag 163 Query: 115 gctggcgagatctccgtctccgccgaggaggaattcaacattgagaagctgcaacttgtt 174 || ||||| || || ||||| || || |||||||||||||||||| |||| | || Sbjct: 164 gccaatgagatttctgtttccgctgaagaagaattcaacattgagaagttgcagttagtg 223 Query: 175 gaagctgagaaaaagaagatcacacaagaatatgagcggaaagagaagcaggttgatgtt 234 ||||| ||||| |||||||| | || ||||| ||||| |||||||| || ||||| ||| Sbjct: 224 gaagcggagaagaagaagattagactggaatacgagcgtaaagagaaacaagttgacgtt 283 Query: 235 cggaagaaaattgagtactctatgcagctgaatgcttcccgtatcaaagtgcttca 290 || |||||||| |||||||| ||||| || ||||| || || |||||||| ||||| Sbjct: 284 cgtaagaaaatagagtactccatgcaactcaatgcctctcggatcaaagttcttca 339
>emb|X92117.1|ATVATPASE A.thaliana mRNA for vacuolar proton ATPase subunit E Length = 949 Score = 111 bits (56), Expect = 1e-21 Identities = 191/236 (80%) Strand = Plus / Plus Query: 55 gatgtctccaggcagatccaacagatggtgcggttcatccgccaggaggcctaggagaag 114 ||||| || ||||||||||| ||||||||| | || |||||||| || || | ||||| Sbjct: 119 gatgtatcgaggcagatccagcagatggtgagatttatccgccaagaagcggaagagaaa 178 Query: 115 gctggcgagatctccgtctccgccgaggaggaattcaacattgagaagctgcaacttgtt 174 || ||||||||| || | || || || ||||||||||||||||| || || |||||| Sbjct: 179 gcaaacgagatctcggttcctgctgaagaagaattcaacattgagaaactccagcttgtt 238 Query: 175 gaagctgagaaaaagaagatcacacaagaatatgagcggaaagagaagcaggttgatgtt 234 || || ||||| |||||||||| ||||| |||||| ||| |||||||| | ||||||| Sbjct: 239 gaggcggagaagaagaagatcaggcaagattatgagaagaaggagaagcaagctgatgtt 298 Query: 235 cggaagaaaattgagtactctatgcagctgaatgcttcccgtatcaaagtgcttca 290 || ||||| ||||| |||||||||||||| ||||| || | |||||||| ||||| Sbjct: 299 cgcaagaagattgattactctatgcagctaaatgcatcaaggatcaaagttcttca 354
>gb|AY220098.1| Phaseolus acutifolius vacuolar ATPase subunit E mRNA, partial cds Length = 931 Score = 109 bits (55), Expect = 5e-21 Identities = 184/227 (81%) Strand = Plus / Plus Query: 64 aggcagatccaacagatggtgcggttcatccgccaggaggcctaggagaaggctggcgag 123 ||||| ||||| |||||||||||||||||||||||||| || |||| || || |||| Sbjct: 5 aggcaaatccagcagatggtgcggttcatccgccaggaagcagaggaaaaagccaacgag 64 Query: 124 atctccgtctccgccgaggaggaattcaacattgagaagctgcaacttgttgaagctgag 183 ||||| ||||||||||| ||||||||||| || ||||||||||| | || ||||| || Sbjct: 65 atctctgtctccgccgaagaggaattcaatatcgagaagctgcagttggtcgaagccgaa 124 Query: 184 aaaaagaagatcacacaagaatatgagcggaaagagaagcaggttgatgttcggaagaaa 243 || |||||||||| ||||| || || || |||||| || || || |||| ||||| Sbjct: 125 aagaagaagatcaggcaagagtacgaacgcaaagagcgccaagtcgaaattcgcaagaag 184 Query: 244 attgagtactctatgcagctgaatgcttcccgtatcaaagtgcttca 290 || ||||| || ||||||||||||||||| || || ||||| ||||| Sbjct: 185 atcgagtattcgatgcagctgaatgcttctcgaattaaagttcttca 231
>emb|X96785.1|SOVHATP S.oleracea mRNA for vacuolar H(+)-ATPase Length = 1030 Score = 109 bits (55), Expect = 5e-21 Identities = 202/251 (80%) Strand = Plus / Plus Query: 40 aagatgaacgacaccgatgtctccaggcagatccaacagatggtgcggttcatccgccag 99 |||||||| ||||||||||| | ||||||||| |||||||| | ||||||||||| Sbjct: 91 aagatgaatgacaccgatgttcagaagcagatccagcagatggttagattcatccgccaa 150 Query: 100 gaggcctaggagaaggctggcgagatctccgtctccgccgaggaggaattcaacattgag 159 || || ||||||| ||| ||||||||||||| | || || ||||| ||||| |||||| Sbjct: 151 gaagcggaggagaaagctaacgagatctccgtcgctgctgaagaggagttcaatattgag 210 Query: 160 aagctgcaacttgttgaagctgagaaaaagaagatcacacaagaatatgagcggaaagag 219 ||| |||| | |||||||| ||||| |||||||||| | ||| || ||||| || ||| Sbjct: 211 aagttgcagttagttgaagcggagaagaagaagatcaggccagagtacgagcgcaaggag 270 Query: 220 aagcaggttgatgttcggaagaaaattgagtactctatgcagctgaatgcttcccgtatc 279 ||||| ||| | ||||| |||||| |||||||| |||||||||||||| || || ||| Sbjct: 271 aagcaagttcaagttcgccggaaaatagagtactccatgcagctgaatgcatctcggatc 330 Query: 280 aaagtgcttca 290 || || ||||| Sbjct: 331 aaggtccttca 341
>emb|BX826893.1|CNS0A2D0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB73ZB05 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1010 Score = 103 bits (52), Expect = 3e-19 Identities = 190/236 (80%) Strand = Plus / Plus Query: 55 gatgtctccaggcagatccaacagatggtgcggttcatccgccaggaggcctaggagaag 114 ||||| || ||||| ||||| ||||||||| | || |||||||| || || | ||||| Sbjct: 102 gatgtatcgaggcaaatccagcagatggtgagatttatccgccaagaagcggaagagaaa 161 Query: 115 gctggcgagatctccgtctccgccgaggaggaattcaacattgagaagctgcaacttgtt 174 || ||||||||| || || || || || |||||||||||| |||| || || |||||| Sbjct: 162 gcgaacgagatctcggtttctgctgaagaagaattcaacatttagaaactccagcttgtt 221 Query: 175 gaagctgagaaaaagaagatcacacaagaatatgagcggaaagagaagcaggttgatgtt 234 || || ||||| |||||||||| ||||| |||||| ||| |||||||| | ||||||| Sbjct: 222 gaggcggagaagaagaagatcaggcaagattatgagaagaaggagaagcaagctgatgtt 281 Query: 235 cggaagaaaattgagtactctatgcagctgaatgcttcccgtatcaaagtgcttca 290 || ||||| ||||| |||||||||||||| ||||| || | |||||||| ||||| Sbjct: 282 cgcaagaagattgattactctatgcagctaaatgcatcaaggatcaaagttcttca 337
>gb|AF282970.1|AF282970 Lycopersicon esculentum putative vacuolar proton ATPase subunit E mRNA, partial cds Length = 844 Score = 99.6 bits (50), Expect = 5e-18 Identities = 122/146 (83%) Strand = Plus / Plus Query: 145 gaattcaacattgagaagctgcaacttgttgaagctgagaaaaagaagatcacacaagaa 204 ||||||||||| |||||| |||| || || ||||| ||||| |||||||||| |||||| Sbjct: 93 gaattcaacatcgagaagttgcagctagtggaagcagagaagaagaagatcagacaagag 152 Query: 205 tatgagcggaaagagaagcaggttgatgttcggaagaaaattgagtactctatgcagctg 264 || || || |||||||| || || |||||||| ||||| ||||||||||| ||||| || Sbjct: 153 tacgaacgcaaagagaaacaagtggatgttcgcaagaagattgagtactccatgcaactc 212 Query: 265 aatgcttcccgtatcaaagtgcttca 290 ||||| || || |||||||| ||||| Sbjct: 213 aatgcctctcgaatcaaagttcttca 238
>gb|BT018259.1| Zea mays clone EL01T0202A06.c mRNA sequence Length = 684 Score = 91.7 bits (46), Expect = 1e-15 Identities = 97/114 (85%) Strand = Plus / Plus Query: 177 agctgagaaaaagaagatcacacaagaatatgagcggaaagagaagcaggttgatgttcg 236 |||||||||||||||||| | | ||| ||||| | || |||||||||||||| | || Sbjct: 1 agctgagaaaaagaagattagtctagagtatgaacccaaggagaagcaggttgaattccg 60 Query: 237 gaagaaaattgagtactctatgcagctgaatgcttcccgtatcaaagtgcttca 290 |||||||||||||| |||||||||| |||||||||| || |||||||| ||||| Sbjct: 61 gaagaaaattgagtcctctatgcagttgaatgcttctcgcatcaaagttcttca 114
>dbj|AK100850.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023123I11, full insert sequence Length = 1060 Score = 83.8 bits (42), Expect = 3e-13 Identities = 87/102 (85%) Strand = Plus / Plus Query: 66 gcagatccaacagatggtgcggttcatccgccaggaggcctaggagaaggctggcgagat 125 ||||||||| |||||||| ||||||||| ||||||||| ||||||| || ||||||| Sbjct: 124 gcagatccagcagatggtcaggttcatcctgcaggaggccgaggagaaagccagcgagat 183 Query: 126 ctccgtctccgccgaggaggaattcaacattgagaagctgca 167 ||| || |||| |||||||| |||||||| ||||||||||| Sbjct: 184 ctcggtggccgcggaggaggagttcaacatagagaagctgca 225
>emb|AL161531.2|ATCHRIV31 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 31 Length = 198301 Score = 79.8 bits (40), Expect = 5e-12 Identities = 85/100 (85%) Strand = Plus / Plus Query: 143 aggaattcaacattgagaagctgcaacttgttgaagctgagaaaaagaagatcacacaag 202 ||||||||||||||||||| || || |||||||| || ||||| |||||||||| |||| Sbjct: 44543 aggaattcaacattgagaaactccagcttgttgaggcggagaagaagaagatcaggcaag 44602 Query: 203 aatatgagcggaaagagaagcaggttgatgttcggaagaa 242 | |||||| ||| |||||||| | ||||||||| ||||| Sbjct: 44603 attatgagaagaaggagaagcaagctgatgttcgcaagaa 44642 Score = 40.1 bits (20), Expect = 3.9 Identities = 38/44 (86%) Strand = Plus / Plus Query: 55 gatgtctccaggcagatccaacagatggtgcggttcatccgcca 98 ||||| || ||||||||||| ||||||||| | || |||||||| Sbjct: 44340 gatgtatcgaggcagatccagcagatggtgagatttatccgcca 44383
>emb|AL049876.1|ATT22B4 Arabidopsis thaliana DNA chromosome 4, BAC clone T22B4 (ESSA project) Length = 108598 Score = 79.8 bits (40), Expect = 5e-12 Identities = 85/100 (85%) Strand = Plus / Plus Query: 143 aggaattcaacattgagaagctgcaacttgttgaagctgagaaaaagaagatcacacaag 202 ||||||||||||||||||| || || |||||||| || ||||| |||||||||| |||| Sbjct: 72076 aggaattcaacattgagaaactccagcttgttgaggcggagaagaagaagatcaggcaag 72135 Query: 203 aatatgagcggaaagagaagcaggttgatgttcggaagaa 242 | |||||| ||| |||||||| | ||||||||| ||||| Sbjct: 72136 attatgagaagaaggagaagcaagctgatgttcgcaagaa 72175 Score = 40.1 bits (20), Expect = 3.9 Identities = 38/44 (86%) Strand = Plus / Plus Query: 55 gatgtctccaggcagatccaacagatggtgcggttcatccgcca 98 ||||| || ||||||||||| ||||||||| | || |||||||| Sbjct: 71873 gatgtatcgaggcagatccagcagatggtgagatttatccgcca 71916
>gb|AF080120.1|F2P3 Arabidopsis thaliana BAC F2P3 Length = 74406 Score = 79.8 bits (40), Expect = 5e-12 Identities = 85/100 (85%) Strand = Plus / Minus Query: 143 aggaattcaacattgagaagctgcaacttgttgaagctgagaaaaagaagatcacacaag 202 ||||||||||||||||||| || || |||||||| || ||||| |||||||||| |||| Sbjct: 21279 aggaattcaacattgagaaactccagcttgttgaggcggagaagaagaagatcaggcaag 21220 Query: 203 aatatgagcggaaagagaagcaggttgatgttcggaagaa 242 | |||||| ||| |||||||| | ||||||||| ||||| Sbjct: 21219 attatgagaagaaggagaagcaagctgatgttcgcaagaa 21180 Score = 40.1 bits (20), Expect = 3.9 Identities = 38/44 (86%) Strand = Plus / Minus Query: 55 gatgtctccaggcagatccaacagatggtgcggttcatccgcca 98 ||||| || ||||||||||| ||||||||| | || |||||||| Sbjct: 21482 gatgtatcgaggcagatccagcagatggtgagatttatccgcca 21439
>gb|AC007764.2|AC007764 Genomic sequence for Arabidopsis thaliana BAC F22C12 from chromosome I, complete sequence Length = 111222 Score = 77.8 bits (39), Expect = 2e-11 Identities = 78/91 (85%) Strand = Plus / Plus Query: 143 aggaattcaacattgagaagctgcaacttgttgaagctgagaaaaagaagatcacacaag 202 ||||||||||||||||||| |||| ||||||||||| ||||| |||||||| | ||||| Sbjct: 21208 aggaattcaacattgagaaattgcagcttgttgaagcagagaagaagaagattagacaag 21267 Query: 203 aatatgagcggaaagagaagcaggttgatgt 233 | |||||| ||| ||||| ||||| ||||| Sbjct: 21268 agtatgagaagaaggagaaacaggtcgatgt 21298 Score = 63.9 bits (32), Expect = 3e-07 Identities = 80/96 (83%) Strand = Plus / Plus Query: 40 aagatgaacgacaccgatgtctccaggcagatccaacagatggtgcggttcatccgccag 99 |||||||||||| |||||| |||| |||||||| |||||||| |||| ||||||||| Sbjct: 20889 aagatgaacgacgccgatgcttccatccagatccagcagatggttaggtttatccgccag 20948 Query: 100 gaggcctaggagaaggctggcgagatctccgtctcc 135 || ||| | || |||||| |||||||||| ||||| Sbjct: 20949 gaagccgaagaaaaggctaacgagatctccatctcc 20984
>gb|AY106923.1| Zea mays PCO133385 mRNA sequence Length = 1211 Score = 77.8 bits (39), Expect = 2e-11 Identities = 162/203 (79%) Strand = Plus / Plus Query: 88 ttcatccgccaggaggcctaggagaaggctggcgagatctccgtctccgccgaggaggaa 147 |||||||||||||||||| |||||||| | ||||||| | | |||||| ||||| Sbjct: 252 ttcatccgccaggaggccgtcgagaaggccgccgagatcgaggccgccgccgccgaggag 311 Query: 148 ttcaacattgagaagctgcaacttgttgaagctgagaaaaagaagatcacacaagaatat 207 ||| | || || ||| |||| || || |||||||| || |||||||||| || |||||| Sbjct: 312 ttccaaatagaaaagttgcagctggtggaagctgaaaagaagaagatcaggcaggaatat 371 Query: 208 gagcggaaagagaagcaggttgatgttcggaagaaaattgagtactctatgcagctgaat 267 || |||||||||||||| |||| | |||||||||||| ||||| |||||||| ||| Sbjct: 372 gaccggaaagagaagcaagttggcatcaagaagaaaattgattactcgatgcagctcaat 431 Query: 268 gcttcccgtatcaaagtgcttca 290 |||||| | || ||||| ||||| Sbjct: 432 gcttccagaattaaagtccttca 454
>gb|AC012562.5|AC012562 Arabidopsis thaliana chromosome 3 BAC F17O14 genomic sequence, complete sequence Length = 90721 Score = 71.9 bits (36), Expect = 1e-09 Identities = 96/116 (82%) Strand = Plus / Plus Query: 40 aagatgaacgacaccgatgtctccaggcagatccaacagatggtgcggttcatccgccag 99 ||||||||||| | ||||| || | |||||| || |||||||| ||||||||||| || Sbjct: 11050 aagatgaacgatgcggatgtgtcaaagcagatacagcagatggtccggttcatccggcaa 11109 Query: 100 gaggcctaggagaaggctggcgagatctccgtctccgccgaggaggaattcaacat 155 || || | ||||| || |||||||||| ||||||||||||||||||||||||| Sbjct: 11110 gaagcagaagagaaagcaaacgagatctccatctccgccgaggaggaattcaacat 11165
>ref|NM_111690.1| Arabidopsis thaliana VHA-E2; hydrogen-exporting ATPase, phosphorylative mechanism / hydrogen-transporting ATP synthase, rotational mechanism / hydro> AT3G08560 (VHA-E2) mRNA, complete cds Length = 708 Score = 67.9 bits (34), Expect = 2e-08 Identities = 76/90 (84%) Strand = Plus / Plus Query: 66 gcagatccaacagatggtgcggttcatccgccaggaggcctaggagaaggctggcgagat 125 |||||| || |||||||| ||||||||||| || || || | ||||| || |||||| Sbjct: 24 gcagatacagcagatggtccggttcatccggcaagaagcagaagagaaagcaaacgagat 83 Query: 126 ctccgtctccgccgaggaggaattcaacat 155 |||| ||||||||||||||||||||||||| Sbjct: 84 ctccatctccgccgaggaggaattcaacat 113
>emb|BX827529.1|CNS0A2RF Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS6ZG09 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 770 Score = 63.9 bits (32), Expect = 3e-07 Identities = 77/92 (83%) Strand = Plus / Plus Query: 199 caagaatatgagcggaaagagaagcaggttgatgttcggaagaaaattgagtactctatg 258 ||||| |||||| ||| |||||||| | ||||||||| ||||| ||||| ||||||||| Sbjct: 8 caagattatgagaagaaggagaagcaagctgatgttcgcaagaagattgattactctatg 67 Query: 259 cagctgaatgcttcccgtatcaaagtgcttca 290 ||||| ||||| || | |||||||| ||||| Sbjct: 68 cagctaaatgcatcaaggatcaaagttcttca 99
>emb|CR962124.2| Medicago truncatula chromosome 5 clone mth2-44c15, COMPLETE SEQUENCE Length = 136068 Score = 63.9 bits (32), Expect = 3e-07 Identities = 83/100 (83%) Strand = Plus / Minus Query: 143 aggaattcaacattgagaagctgcaacttgttgaagctgagaaaaagaagatcacacaag 202 |||||||||| || |||||| | || | ||||||||||| || ||||||||| |||| Sbjct: 23437 aggaattcaatatcgagaagttacagttggttgaagctgataagaagaagatccgtcaag 23378 Query: 203 aatatgagcggaaagagaagcaggttgatgttcggaagaa 242 | |||||||| |||||||| || ||||||||||| ||||| Sbjct: 23377 agtatgagcgcaaagagaaacaagttgatgttcgtaagaa 23338 Score = 58.0 bits (29), Expect = 2e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 43 atgaacgacaccgatgtctccaggcagatccaacagatggtgcggttcatccg 95 ||||||||| | |||||||||| ||| ||||| |||||||||||||| ||||| Sbjct: 23667 atgaacgacgcagatgtctccaagcaaatccagcagatggtgcggtttatccg 23615 Score = 44.1 bits (22), Expect = 0.25 Identities = 25/26 (96%) Strand = Plus / Minus Query: 247 gagtactctatgcagctgaatgcttc 272 ||||||||||||||| |||||||||| Sbjct: 22498 gagtactctatgcagttgaatgcttc 22473
>ref|NM_188514.1| Oryza sativa (japonica cultivar-group), Ozsa8183 predicted mRNA Length = 693 Score = 46.1 bits (23), Expect = 0.063 Identities = 35/39 (89%) Strand = Plus / Plus Query: 237 gaagaaaattgagtactctatgcagctgaatgcttcccg 275 |||||||||||| ||||| | |||||| ||||||||||| Sbjct: 195 gaagaaaattgaatactcaaagcagctcaatgcttcccg 233
>ref|NM_001012316.1| Danio rerio ribosomal protein S24 (rps24), transcript variant 1, mRNA Length = 533 Score = 46.1 bits (23), Expect = 0.063 Identities = 23/23 (100%) Strand = Plus / Plus Query: 31 gccgacgccaagatgaacgacac 53 ||||||||||||||||||||||| Sbjct: 22 gccgacgccaagatgaacgacac 44
>gb|BC081494.1| Danio rerio ribosomal protein S24, transcript variant 1, mRNA (cDNA clone MGC:103596 IMAGE:7247764), complete cds Length = 533 Score = 46.1 bits (23), Expect = 0.063 Identities = 23/23 (100%) Strand = Plus / Plus Query: 31 gccgacgccaagatgaacgacac 53 ||||||||||||||||||||||| Sbjct: 22 gccgacgccaagatgaacgacac 44
>ref|NM_169073.1| Drosophila melanogaster Vacuolar H+-ATPase 26kD E subunit CG1088-RA, transcript variant A (Vha26), mRNA Length = 2276 Score = 46.1 bits (23), Expect = 0.063 Identities = 26/27 (96%) Strand = Plus / Plus Query: 136 gccgaggaggaattcaacattgagaag 162 ||||||||||| ||||||||||||||| Sbjct: 342 gccgaggaggagttcaacattgagaag 368
>ref|NM_079513.2| Drosophila melanogaster Vacuolar H+-ATPase 26kD E subunit CG1088-RB, transcript variant B (Vha26), mRNA Length = 2211 Score = 46.1 bits (23), Expect = 0.063 Identities = 26/27 (96%) Strand = Plus / Plus Query: 136 gccgaggaggaattcaacattgagaag 162 ||||||||||| ||||||||||||||| Sbjct: 277 gccgaggaggagttcaacattgagaag 303
>ref|XM_684875.1| PREDICTED: Danio rerio similar to Ribosomal protein S24, isoform 1 (LOC573098), mRNA Length = 506 Score = 46.1 bits (23), Expect = 0.063 Identities = 23/23 (100%) Strand = Plus / Plus Query: 31 gccgacgccaagatgaacgacac 53 ||||||||||||||||||||||| Sbjct: 32 gccgacgccaagatgaacgacac 54
>gb|BC094973.1| Danio rerio ribosomal protein S24, mRNA (cDNA clone MGC:109740 IMAGE:7244009), complete cds Length = 532 Score = 46.1 bits (23), Expect = 0.063 Identities = 23/23 (100%) Strand = Plus / Plus Query: 31 gccgacgccaagatgaacgacac 53 ||||||||||||||||||||||| Sbjct: 22 gccgacgccaagatgaacgacac 44
>gb|AC009538.4|AC009538 Drosophila melanogaster, chromosome 3R, region 83A-83A, BAC clone BACR24O24, complete sequence Length = 173927 Score = 46.1 bits (23), Expect = 0.063 Identities = 26/27 (96%) Strand = Plus / Plus Query: 136 gccgaggaggaattcaacattgagaag 162 ||||||||||| ||||||||||||||| Sbjct: 136961 gccgaggaggagttcaacattgagaag 136987
>gb|AC009346.5|AC009346 Drosophila melanogaster, chromosome 3R, region 83A-83B, BAC clone BACR03P13, complete sequence Length = 168448 Score = 46.1 bits (23), Expect = 0.063 Identities = 26/27 (96%) Strand = Plus / Plus Query: 136 gccgaggaggaattcaacattgagaag 162 ||||||||||| ||||||||||||||| Sbjct: 21951 gccgaggaggagttcaacattgagaag 21977
>dbj|AK072778.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023139P14, full insert sequence Length = 1162 Score = 46.1 bits (23), Expect = 0.063 Identities = 35/39 (89%) Strand = Plus / Plus Query: 237 gaagaaaattgagtactctatgcagctgaatgcttcccg 275 |||||||||||| ||||| | |||||| ||||||||||| Sbjct: 319 gaagaaaattgaatactcaaagcagctcaatgcttcccg 357
>gb|AF145618.1|AF145618 Drosophila melanogaster clone GH03683 BcDNA.GH03683 (BcDNA.GH03683) mRNA, complete cds Length = 2232 Score = 46.1 bits (23), Expect = 0.063 Identities = 26/27 (96%) Strand = Plus / Plus Query: 136 gccgaggaggaattcaacattgagaag 162 ||||||||||| ||||||||||||||| Sbjct: 288 gccgaggaggagttcaacattgagaag 314
>gb|AE003602.4| Drosophila melanogaster chromosome 3R, section 6 of 118 of the complete sequence Length = 326091 Score = 46.1 bits (23), Expect = 0.063 Identities = 26/27 (96%) Strand = Plus / Plus Query: 136 gccgaggaggaattcaacattgagaag 162 ||||||||||| ||||||||||||||| Sbjct: 182022 gccgaggaggagttcaacattgagaag 182048
>gb|U38951.1|DMU38951 Drosophila melanogaster vacuolar ATPase subunit E (vha26) gene, complete cds Length = 3076 Score = 46.1 bits (23), Expect = 0.063 Identities = 26/27 (96%) Strand = Plus / Plus Query: 136 gccgaggaggaattcaacattgagaag 162 ||||||||||| ||||||||||||||| Sbjct: 908 gccgaggaggagttcaacattgagaag 934
>gb|U38198.1|DMU38198 Drosophila melanogaster V-ATPase subunit E (vha26) mRNA, complete cds Length = 2096 Score = 46.1 bits (23), Expect = 0.063 Identities = 26/27 (96%) Strand = Plus / Plus Query: 136 gccgaggaggaattcaacattgagaag 162 ||||||||||| ||||||||||||||| Sbjct: 177 gccgaggaggagttcaacattgagaag 203
>emb|AJ223042.1|DME223042 Drosophila melanogaster noisette gene Length = 3578 Score = 46.1 bits (23), Expect = 0.063 Identities = 26/27 (96%) Strand = Plus / Minus Query: 136 gccgaggaggaattcaacattgagaag 162 ||||||||||| ||||||||||||||| Sbjct: 102 gccgaggaggagttcaacattgagaag 76
>gb|AY423012.1| Danio rerio ribosomal protein S24 (RPS24) mRNA, complete cds Length = 1571 Score = 44.1 bits (22), Expect = 0.25 Identities = 22/22 (100%) Strand = Plus / Plus Query: 32 ccgacgccaagatgaacgacac 53 |||||||||||||||||||||| Sbjct: 1 ccgacgccaagatgaacgacac 22
>ref|NM_201216.1| Danio rerio ribosomal protein S24 (rps24), transcript variant 2, mRNA Length = 1571 Score = 44.1 bits (22), Expect = 0.25 Identities = 22/22 (100%) Strand = Plus / Plus Query: 32 ccgacgccaagatgaacgacac 53 |||||||||||||||||||||| Sbjct: 1 ccgacgccaagatgaacgacac 22
>gb|AC117227.3| Mus musculus BAC clone RP23-380C5 from 13, complete sequence Length = 190816 Score = 44.1 bits (22), Expect = 0.25 Identities = 22/22 (100%) Strand = Plus / Minus Query: 245 ttgagtactctatgcagctgaa 266 |||||||||||||||||||||| Sbjct: 118927 ttgagtactctatgcagctgaa 118906
>gb|AF045642.2| Caenorhabditis elegans cosmid C17H12, complete sequence Length = 47345 Score = 44.1 bits (22), Expect = 0.25 Identities = 25/26 (96%) Strand = Plus / Plus Query: 136 gccgaggaggaattcaacattgagaa 161 |||||||| ||||||||||||||||| Sbjct: 13117 gccgaggaagaattcaacattgagaa 13142
>gb|AC140913.25| Medicago truncatula clone mth2-26h9, complete sequence Length = 124828 Score = 44.1 bits (22), Expect = 0.25 Identities = 25/26 (96%) Strand = Plus / Plus Query: 247 gagtactctatgcagctgaatgcttc 272 ||||||||||||||| |||||||||| Sbjct: 648 gagtactctatgcagttgaatgcttc 673
>ref|NM_068639.2| Caenorhabditis elegans C17H12.14 (ATPase) mRNA, complete cds Length = 1245 Score = 44.1 bits (22), Expect = 0.25 Identities = 25/26 (96%) Strand = Plus / Plus Query: 136 gccgaggaggaattcaacattgagaa 161 |||||||| ||||||||||||||||| Sbjct: 126 gccgaggaagaattcaacattgagaa 151
>gb|AC096628.14| Mus musculus strain C57BL/6J chromosome 13 clone rp23-81n4, complete sequence Length = 194818 Score = 44.1 bits (22), Expect = 0.25 Identities = 22/22 (100%) Strand = Plus / Plus Query: 245 ttgagtactctatgcagctgaa 266 |||||||||||||||||||||| Sbjct: 120891 ttgagtactctatgcagctgaa 120912
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 42.1 bits (21), Expect = 0.99 Identities = 21/21 (100%) Strand = Plus / Plus Query: 24 cgccgccgccgacgccaagat 44 ||||||||||||||||||||| Sbjct: 775582 cgccgccgccgacgccaagat 775602
>emb|BX842574.1| Mycobacterium tuberculosis H37Rv complete genome; segment 3/13 Length = 349564 Score = 42.1 bits (21), Expect = 0.99 Identities = 21/21 (100%) Strand = Plus / Plus Query: 24 cgccgccgccgacgccaagat 44 ||||||||||||||||||||| Sbjct: 89335 cgccgccgccgacgccaagat 89355
>emb|BX248336.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 3/14 Length = 320050 Score = 42.1 bits (21), Expect = 0.99 Identities = 21/21 (100%) Strand = Plus / Plus Query: 24 cgccgccgccgacgccaagat 44 ||||||||||||||||||||| Sbjct: 108377 cgccgccgccgacgccaagat 108397
>dbj|AB183875.1| Cyanophora paradoxa CpFtsZ-cy mRNA for plastid division protein FtsZ, complete cds Length = 1517 Score = 42.1 bits (21), Expect = 0.99 Identities = 21/21 (100%) Strand = Plus / Minus Query: 23 ccgccgccgccgacgccaaga 43 ||||||||||||||||||||| Sbjct: 398 ccgccgccgccgacgccaaga 378
>dbj|BA000043.1| Geobacillus kaustophilus HTA426 DNA, complete genome Length = 3544776 Score = 42.1 bits (21), Expect = 0.99 Identities = 24/25 (96%) Strand = Plus / Minus Query: 22 tccgccgccgccgacgccaagatga 46 |||||||||||||||||||| |||| Sbjct: 1109331 tccgccgccgccgacgccaacatga 1109307
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 42.1 bits (21), Expect = 0.99 Identities = 21/21 (100%) Strand = Plus / Plus Query: 24 cgccgccgccgacgccaagat 44 ||||||||||||||||||||| Sbjct: 4613867 cgccgccgccgacgccaagat 4613887
>dbj|D11038.1|TBAPS3COI Thermophilic bacterium gene for cytochrome oxidase subunit I (COI), complete cds Length = 1844 Score = 42.1 bits (21), Expect = 0.99 Identities = 24/25 (96%) Strand = Plus / Minus Query: 22 tccgccgccgccgacgccaagatga 46 |||||||||||||||||||| |||| Sbjct: 1310 tccgccgccgccgacgccaacatga 1286
>dbj|D13955.1|TBACYC Thermophilic bacterium PS3, caaA, caaB, caaC, caaD genes coding for cytochrome c oxidase subunit 1-4, (EC 1.9.3.1.) Length = 4736 Score = 42.1 bits (21), Expect = 0.99 Identities = 24/25 (96%) Strand = Plus / Minus Query: 22 tccgccgccgccgacgccaagatga 46 |||||||||||||||||||| |||| Sbjct: 2888 tccgccgccgccgacgccaacatga 2864
>ref|XM_525250.1| PREDICTED: Pan troglodytes similar to KIAA0552 protein (LOC469865), mRNA Length = 2733 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 110 agaaggctggcgagatctcc 129 |||||||||||||||||||| Sbjct: 2360 agaaggctggcgagatctcc 2379
>ref|XM_468640.1| Oryza sativa (japonica cultivar-group), mRNA Length = 786 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 ccgccgccgccgacgccaag 42 |||||||||||||||||||| Sbjct: 541 ccgccgccgccgacgccaag 560
>gb|AC092262.6| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1212_C05 map C12819S, complete sequence Length = 113266 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 23 ccgccgccgccgacgccaag 42 |||||||||||||||||||| Sbjct: 25259 ccgccgccgccgacgccaag 25240
>gb|AC130598.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0056I11, complete sequence Length = 145796 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 cgtcagatccgccgccgccg 34 |||||||||||||||||||| Sbjct: 121945 cgtcagatccgccgccgccg 121964
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 23 ccgccgccgccgacgccaag 42 |||||||||||||||||||| Sbjct: 16787409 ccgccgccgccgacgccaag 16787390
>ref|XM_386878.1| Gibberella zeae PH-1 chromosome 4 hypothetical protein (FG06702.1) partial mRNA Length = 744 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 116 ctggcgagatctccgtctcc 135 |||||||||||||||||||| Sbjct: 221 ctggcgagatctccgtctcc 240
>gb|AC121768.2| Mus musculus BAC clone RP23-339H16 from 15, complete sequence Length = 199607 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 179 ctgagaaaaagaagatcaca 198 |||||||||||||||||||| Sbjct: 129297 ctgagaaaaagaagatcaca 129278
>ref|XM_673075.1| Plasmodium berghei strain ANKA hypothetical protein (PB001518.02.0) partial mRNA Length = 3375 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 182 agaaaaagaagatcacacaa 201 |||||||||||||||||||| Sbjct: 2184 agaaaaagaagatcacacaa 2203
>emb|AL357034.18| Human DNA sequence from clone RP11-560I21 on chromosome 6 Contains the 3' end of the STX7 gene for syntaxin 7, the 5' end of the MOXD1 gene for monooxygenase DBH-like 1 and two CpG islands, complete sequence Length = 127703 Score = 40.1 bits (20), Expect = 3.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 239 agaaaattgagtactctatgcagctgaa 266 |||||||||||| ||||||||| ||||| Sbjct: 62930 agaaaattgagtcctctatgcaactgaa 62903
>emb|AL121891.22|HS1187M17 Human DNA sequence from clone RP5-1187M17 on chromosome 20 Contains the 5' end of the AVP gene for arginine vasopressin (neurophysin II), the gene KIAA0860 for a likely ortholog of mouse ubiquitin conjugating enzyme a novel gene 7 interacting protein 5, a novel gene (FLJ3149), a novel gene (KIAA0552), the C20orf116 gene, the 5' end of the ITPA gene for inosine triphosphatase (nucleoside triphosphate pyrophosphatase), a novel transcript and nine CpG islands, complete sequence Length = 125856 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 110 agaaggctggcgagatctcc 129 |||||||||||||||||||| Sbjct: 80251 agaaggctggcgagatctcc 80232
>ref|NM_014731.2| Homo sapiens ProSAPiP1 protein (ProSAPiP1), mRNA Length = 5247 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 110 agaaggctggcgagatctcc 129 |||||||||||||||||||| Sbjct: 2729 agaaggctggcgagatctcc 2748
>gb|BC038860.1| Homo sapiens ProSAPiP1 protein, mRNA (cDNA clone MGC:33747 IMAGE:5260571), complete cds Length = 4061 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 110 agaaggctggcgagatctcc 129 |||||||||||||||||||| Sbjct: 1529 agaaggctggcgagatctcc 1548
>gb|AF521878.1| Streptomyces narbonensis desosamine biosynthetic gene cluster, partial sequence Length = 17665 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 86 ggttcatccgccaggaggcc 105 |||||||||||||||||||| Sbjct: 16068 ggttcatccgccaggaggcc 16049
>gb|AF402832.1| Ictalurus punctatus 40S ribosomal protein S24 mRNA, complete cds Length = 481 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 cgacgccaagatgaacgaca 52 |||||||||||||||||||| Sbjct: 10 cgacgccaagatgaacgaca 29
>gb|AC091211.3| Drosophila melanogaster 3L BAC RP98-26E12 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 194589 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 26 ccgccgccgacgccaagatgaacg 49 ||||||||||| |||||||||||| Sbjct: 159940 ccgccgccgactccaagatgaacg 159917
>gb|AC091228.3| Drosophila melanogaster 3L BAC RP98-10L9 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 156142 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 26 ccgccgccgacgccaagatgaacg 49 ||||||||||| |||||||||||| Sbjct: 84445 ccgccgccgactccaagatgaacg 84468
>gb|AC024594.9| Oryza sativa chromosome 10 BAC OSJNBa0093B11 genomic sequence, complete sequence Length = 178692 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 cgtcagatccgccgccgccg 34 |||||||||||||||||||| Sbjct: 71607 cgtcagatccgccgccgccg 71588
>ref|NM_168179.1| Drosophila melanogaster CG32394-PA (CG32394) mRNA, complete cds Length = 8274 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 26 ccgccgccgacgccaagatgaacg 49 ||||||||||| |||||||||||| Sbjct: 1315 ccgccgccgactccaagatgaacg 1338
>gb|AY075420.1| Drosophila melanogaster LD41761 full length cDNA Length = 1511 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 26 ccgccgccgacgccaagatgaacg 49 ||||||||||| |||||||||||| Sbjct: 1315 ccgccgccgactccaagatgaacg 1338
>gb|CP000264.1| Jannaschia sp. CCS1, complete genome Length = 4317977 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 21 atccgccgccgccgacgcca 40 |||||||||||||||||||| Sbjct: 3737073 atccgccgccgccgacgcca 3737092
>gb|AC018902.8| Homo sapiens chromosome 15 clone RP11-327C2 map 15Q21.2, complete sequence Length = 157226 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 145 gaattcaacattgagaagctgcaa 168 |||||||||||| ||||||||||| Sbjct: 8349 gaattcaacattaagaagctgcaa 8372
>gb|AC010674.11| Homo sapiens chromosome 15 clone RP11-430B1 map 15q21.1, complete sequence Length = 214415 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 145 gaattcaacattgagaagctgcaa 168 |||||||||||| ||||||||||| Sbjct: 185569 gaattcaacattaagaagctgcaa 185592
>dbj|AK043625.1| Mus musculus 10 days neonate cortex cDNA, RIKEN full-length enriched library, clone:A830013C24 product:unclassifiable, full insert sequence Length = 1283 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 179 ctgagaaaaagaagatcaca 198 |||||||||||||||||||| Sbjct: 710 ctgagaaaaagaagatcaca 691
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 14 tcgtcagatccgccgccgcc 33 |||||||||||||||||||| Sbjct: 4603796 tcgtcagatccgccgccgcc 4603815
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 cgtcagatccgccgccgccg 34 |||||||||||||||||||| Sbjct: 17603024 cgtcagatccgccgccgccg 17603043
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 17 tcagatccgccgccgccgacgcca 40 |||||||||||||||||| ||||| Sbjct: 1001114 tcagatccgccgccgccgtcgcca 1001137
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 cgtcagatccgccgccgccg 34 |||||||||||||||||||| Sbjct: 1669785 cgtcagatccgccgccgccg 1669804
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 23 ccgccgccgccgacgccaag 42 |||||||||||||||||||| Sbjct: 16781042 ccgccgccgccgacgccaag 16781023
>gb|AF323785.1|AF323785 Oryza sativa subsp. indica KNOX class homeodomain protein (Oskn2) gene, partial cds Length = 3589 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 cgtcagatccgccgccgccg 34 |||||||||||||||||||| Sbjct: 2855 cgtcagatccgccgccgccg 2836
>dbj|AP005709.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0646B04 Length = 178896 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 17 tcagatccgccgccgccgacgcca 40 |||||||||||||||||| ||||| Sbjct: 165241 tcagatccgccgccgccgtcgcca 165264
>dbj|AP005860.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1134_E08 Length = 153002 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 17 tcagatccgccgccgccgacgcca 40 |||||||||||||||||| ||||| Sbjct: 38807 tcagatccgccgccgccgtcgcca 38830
>dbj|AB011124.1| Homo sapiens mRNA for KIAA0552 protein, partial cds Length = 5257 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 110 agaaggctggcgagatctcc 129 |||||||||||||||||||| Sbjct: 2739 agaaggctggcgagatctcc 2758
>dbj|AK111878.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033046I12, full insert sequence Length = 1785 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 cgtcagatccgccgccgccg 34 |||||||||||||||||||| Sbjct: 656 cgtcagatccgccgccgccg 637
>gb|AF050180.1|AF050180 Oryza sativa strain Indica IR58 KNOX class homeodomain protein (Oskn2) mRNA, complete cds Length = 1521 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 cgtcagatccgccgccgccg 34 |||||||||||||||||||| Sbjct: 471 cgtcagatccgccgccgccg 452
>gb|AE003561.3| Drosophila melanogaster chromosome 3L, section 24 of 83 of the complete sequence Length = 274289 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 26 ccgccgccgacgccaagatgaacg 49 ||||||||||| |||||||||||| Sbjct: 87528 ccgccgccgactccaagatgaacg 87505
>dbj|AP003783.4| Homo sapiens genomic DNA, chromosome 11 clone:RP11-598K3, complete sequence Length = 172763 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 169 cttgttgaagctgagaaaaa 188 |||||||||||||||||||| Sbjct: 109601 cttgttgaagctgagaaaaa 109582
>gb|AF079139.1|AF079139 Streptomyces venezuelae pikCD operon, complete sequence Length = 4342 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 86 ggttcatccgccaggaggcc 105 |||||||||||||||||||| Sbjct: 2798 ggttcatccgccaggaggcc 2779
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 cgtcagatccgccgccgccg 34 |||||||||||||||||||| Sbjct: 17612064 cgtcagatccgccgccgccg 17612083
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 14 tcgtcagatccgccgccgcc 33 |||||||||||||||||||| Sbjct: 4603777 tcgtcagatccgccgccgcc 4603796
>emb|AL928749.4|CNS08CBM Oryza sativa chromosome 12, . BAC OSJNBa0002O20 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 129155 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 14 tcgtcagatccgccgccgcc 33 |||||||||||||||||||| Sbjct: 982 tcgtcagatccgccgccgcc 963
>dbj|AB028885.1| Oryza sativa mRNA for knotted1-type homeobox protein OSH71, complete cds Length = 1576 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 cgtcagatccgccgccgccg 34 |||||||||||||||||||| Sbjct: 451 cgtcagatccgccgccgccg 432
>dbj|AB007624.1| Oryza sativa (japonica cultivar-group) HOS9 mRNA, partial cds Length = 1346 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 cgtcagatccgccgccgccg 34 |||||||||||||||||||| Sbjct: 217 cgtcagatccgccgccgccg 198 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,158,744 Number of Sequences: 3902068 Number of extensions: 3158744 Number of successful extensions: 84076 Number of sequences better than 10.0: 111 Number of HSP's better than 10.0 without gapping: 111 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 82822 Number of HSP's gapped (non-prelim): 1242 length of query: 297 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 275 effective length of database: 17,147,199,772 effective search space: 4715479937300 effective search space used: 4715479937300 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
