Clone Name | bart44h05 |
---|---|
Clone Library Name | barley_pub |
>OGFR_HUMAN (Q9NZT2) Opioid growth factor receptor (OGFr) (Zeta-type opioid| receptor) (7-60 protein) Length = 677 Score = 30.8 bits (68), Expect = 2.8 Identities = 16/38 (42%), Positives = 20/38 (52%) Frame = -1 Query: 448 AGKSRSGMPTQVRLRAEPPAGAPSAPLQTPMASPVAGP 335 AG S +G+ R P G P +P +TP SP AGP Sbjct: 493 AGHSENGVEEDTEGRTGPKEGTPGSPSETPGPSP-AGP 529
>PRRT1_HUMAN (Q99946) Proline-rich transmembrane protein 1| Length = 306 Score = 30.4 bits (67), Expect = 3.6 Identities = 13/34 (38%), Positives = 17/34 (50%) Frame = -1 Query: 436 RSGMPTQVRLRAEPPAGAPSAPLQTPMASPVAGP 335 +SG+P V + PP AP P + P P A P Sbjct: 5 KSGLPDSVPHTSPPPYNAPQPPAEPPAPPPQAAP 38
>PO6F2_HUMAN (P78424) POU domain, class 6, transcription factor 2| (Retina-derived POU-domain factor 1) (RPF-1) Length = 684 Score = 30.4 bits (67), Expect = 3.6 Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 8/35 (22%) Frame = -2 Query: 528 APKAQSGQERSHNHNQ--------ASDPPRKPKHS 448 AP+ Q Q SH+HNQ +S PP+KP S Sbjct: 238 APQPQQHQPHSHSHNQNQPSPTQQSSSPPQKPSQS 272
>PRRT1_MOUSE (O35449) Proline-rich transmembrane protein 1| Length = 306 Score = 29.6 bits (65), Expect = 6.1 Identities = 12/34 (35%), Positives = 17/34 (50%) Frame = -1 Query: 436 RSGMPTQVRLRAEPPAGAPSAPLQTPMASPVAGP 335 +SG+P V + PP AP P + P+ P P Sbjct: 5 KSGLPDSVPHTSPPPYNAPQPPAEPPIPPPQTAP 38
>SEMG1_SAGOE (O77733) Semenogelin-1 precursor (Semenogelin I) (SGI)| Length = 615 Score = 29.3 bits (64), Expect = 8.0 Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 4/39 (10%) Frame = -2 Query: 498 SHNHNQASDPPRKPKHSQERADRACQLKCASA----PNH 394 S N NQ +P + +H Q+ +R+CQ C+S PNH Sbjct: 254 SKNQNQTRNPNQDQEHGQKAHNRSCQ--CSSTEERRPNH 290
>DNAA_PSEAE (Q9I7C5) Chromosomal replication initiator protein dnaA| Length = 514 Score = 29.3 bits (64), Expect = 8.0 Identities = 12/31 (38%), Positives = 17/31 (54%) Frame = -1 Query: 427 MPTQVRLRAEPPAGAPSAPLQTPMASPVAGP 335 +P+Q + PP P AP+Q A+PV P Sbjct: 91 VPSQTHVAPPPPVAPPPAPVQPVSAAPVVVP 121
>TIE1_BOVIN (Q06805) Tyrosine-protein kinase receptor Tie-1 precursor (EC| 2.7.10.1) Length = 1136 Score = 29.3 bits (64), Expect = 8.0 Identities = 14/37 (37%), Positives = 20/37 (54%) Frame = +2 Query: 347 GAGHRGLQRGGRCAGWWFGAEAHLSWHARSALSCECF 457 G+G RG Q CA FGA+ HL ++ +C+ F Sbjct: 292 GSGWRGSQCQEACAPGRFGADCHLQCQCQNGGTCDRF 328 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 44,563,606 Number of Sequences: 219361 Number of extensions: 589731 Number of successful extensions: 3059 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 2829 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3049 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4643056080 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)