Clone Name | bart44h05 |
---|---|
Clone Library Name | barley_pub |
>gb|AC148759.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0030K09, complete sequence Length = 143355 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 26 caggggcgacacgggcggcgacc 48 ||||||||||||||||||||||| Sbjct: 85777 caggggcgacacgggcggcgacc 85755
>gb|AC136378.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0047D03, complete sequence Length = 126165 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 26 caggggcgacacgggcggcgacc 48 ||||||||||||||||||||||| Sbjct: 3164 caggggcgacacgggcggcgacc 3142
>ref|XM_721858.1| Plasmodium yoelii yoelii str. 17XNL 34 kDa phosphoprotein (PY00792) partial mRNA Length = 772 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Plus Query: 270 tgggcggcctaggaggcgtgggcggcctgggaggc 304 |||||||||||||||| |||||||| |||||||| Sbjct: 432 tgggcggcctaggaggtatgggcggcatgggaggc 466 Score = 44.1 bits (22), Expect = 0.49 Identities = 31/34 (91%) Strand = Plus / Plus Query: 270 tgggcggcctaggaggcgtgggcggcctgggagg 303 |||| |||||||||||| |||||||| ||||||| Sbjct: 459 tgggaggcctaggaggcatgggcggcatgggagg 492
>emb|AL606691.4|OSJN00081 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0060N03, complete sequence Length = 179798 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 26 caggggcgacacgggcggcgacc 48 ||||||||||||||||||||||| Sbjct: 17658 caggggcgacacgggcggcgacc 17680
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 26 caggggcgacacgggcggcgacc 48 ||||||||||||||||||||||| Sbjct: 30750236 caggggcgacacgggcggcgacc 30750258 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 27 aggggcgacacgggcggcgacc 48 |||||||||||||||||||||| Sbjct: 6957554 aggggcgacacgggcggcgacc 6957533 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 163 ccgcggcggcgtcctccacgagtt 186 |||||||||||| ||||||||||| Sbjct: 1779496 ccgcggcggcgtgctccacgagtt 1779473
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 26 caggggcgacacgggcggcgacc 48 ||||||||||||||||||||||| Sbjct: 16636821 caggggcgacacgggcggcgacc 16636799
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 26 caggggcgacacgggcggcgacc 48 ||||||||||||||||||||||| Sbjct: 13065331 caggggcgacacgggcggcgacc 13065353
>dbj|AP005556.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1118_F11 Length = 113866 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 26 caggggcgacacgggcggcgacc 48 ||||||||||||||||||||||| Sbjct: 92209 caggggcgacacgggcggcgacc 92231
>dbj|AK109823.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-148-A11, full insert sequence Length = 1757 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 26 caggggcgacacgggcggcgacc 48 ||||||||||||||||||||||| Sbjct: 34 caggggcgacacgggcggcgacc 56
>dbj|AK106108.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-D03, full insert sequence Length = 1379 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 26 caggggcgacacgggcggcgacc 48 ||||||||||||||||||||||| Sbjct: 16 caggggcgacacgggcggcgacc 38
>dbj|AK106066.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-206-G10, full insert sequence Length = 1138 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 26 caggggcgacacgggcggcgacc 48 ||||||||||||||||||||||| Sbjct: 36 caggggcgacacgggcggcgacc 58
>dbj|AK066668.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013073D21, full insert sequence Length = 2007 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 26 caggggcgacacgggcggcgacc 48 ||||||||||||||||||||||| Sbjct: 60 caggggcgacacgggcggcgacc 82
>dbj|AK063279.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-113-C08, full insert sequence Length = 1532 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 26 caggggcgacacgggcggcgacc 48 ||||||||||||||||||||||| Sbjct: 40 caggggcgacacgggcggcgacc 62
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 26 caggggcgacacgggcggcgacc 48 ||||||||||||||||||||||| Sbjct: 16715873 caggggcgacacgggcggcgacc 16715851
>emb|AL591789.1|SME591789 Sinorhizobium meliloti 1021 complete chromosome; segment 8/12 Length = 294800 Score = 44.1 bits (22), Expect = 0.49 Identities = 28/30 (93%) Strand = Plus / Plus Query: 89 cctcgccgtcgccggtgcctcccgtgagca 118 ||||||||||||||||||| |||| ||||| Sbjct: 77369 cctcgccgtcgccggtgccgcccgagagca 77398
>emb|AL606606.3|OSJN00046 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0005B05, complete sequence Length = 149134 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 27 aggggcgacacgggcggcgacc 48 |||||||||||||||||||||| Sbjct: 120425 aggggcgacacgggcggcgacc 120404
>gb|AY549206.1| Streptomyces tubercidicus ferredoxin reductase (fre12) gene, complete cds Length = 1314 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 216 gagggcgacggccggcgcgtc 236 ||||||||||||||||||||| Sbjct: 781 gagggcgacggccggcgcgtc 801
>ref|NM_186151.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1707 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 78 cctcctcctcccctcgccgtcgccg 102 ||||||||||| ||||||||||||| Sbjct: 252 cctcctcctcctctcgccgtcgccg 228
>gb|AE017139.1| Yersinia pestis biovar Medievalis str. 91001 section 13 of 16 of the complete genome Length = 294253 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 132 gctggcggcggcggggccggt 152 ||||||||||||||||||||| Sbjct: 145039 gctggcggcggcggggccggt 145019
>gb|AE009952.1| Yersinia pestis KIM, complete genome Length = 4600755 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 132 gctggcggcggcggggccggt 152 ||||||||||||||||||||| Sbjct: 489099 gctggcggcggcggggccggt 489079
>emb|AL512410.14| Human DNA sequence from clone RP11-100E6 on chromosome 6, complete sequence Length = 160891 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 469 tggatctgaggcttggttgtg 489 ||||||||||||||||||||| Sbjct: 26860 tggatctgaggcttggttgtg 26840
>emb|BX936398.1| Yersinia pseudotuberculosis IP32953 genome, complete sequence Length = 4744671 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 132 gctggcggcggcggggccggt 152 ||||||||||||||||||||| Sbjct: 287648 gctggcggcggcggggccggt 287628
>emb|AJ414159.1| Yersinia pestis strain CO92 complete genome; segment 19/20 Length = 199050 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 132 gctggcggcggcggggccggt 152 ||||||||||||||||||||| Sbjct: 5615 gctggcggcggcggggccggt 5635
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 78 cctcctcctcccctcgccgtcgccg 102 ||||||||||| ||||||||||||| Sbjct: 443750 cctcctcctcctctcgccgtcgccg 443774 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 26 caggggcgacacgggcggcgaccc 49 ||||||||||||||| |||||||| Sbjct: 21466852 caggggcgacacgggaggcgaccc 21466875
>dbj|AP004342.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0585H11 Length = 149371 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 78 cctcctcctcccctcgccgtcgccg 102 ||||||||||| ||||||||||||| Sbjct: 45914 cctcctcctcctctcgccgtcgccg 45938
>gb|AC134236.4| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0056G13, complete sequence Length = 148011 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 23 ccccaggggcgacacgggcggcga 46 ||||||||||||| |||||||||| Sbjct: 100527 ccccaggggcgacgcgggcggcga 100550
>ref|XM_550346.1| Oryza sativa (japonica cultivar-group), mRNA Length = 976 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 79 ctcctcctcccctcgccgtcgccg 102 |||||||||||||||||| ||||| Sbjct: 75 ctcctcctcccctcgccgccgccg 52
>ref|XM_483463.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1110 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 ccgcggcggcgtcctccacg 182 |||||||||||||||||||| Sbjct: 576 ccgcggcggcgtcctccacg 595
>ref|XM_471138.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1416 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 163 ccgcggcggcgtcctccacgagtt 186 |||||||||||| ||||||||||| Sbjct: 564 ccgcggcggcgtgctccacgagtt 587
>gb|AC078977.6| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0496H07, complete sequence Length = 164477 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 79 ctcctcctcccctcgccgtcgccg 102 |||||||||| ||||||||||||| Sbjct: 99428 ctcctcctccgctcgccgtcgccg 99451
>ref|XM_364510.1| Magnaporthe grisea 70-15 hypothetical protein (MG09416.4) partial mRNA Length = 1152 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 29 gggcgacacgggcggcgaccccga 52 |||| ||||||||||||||||||| Sbjct: 846 gggccacacgggcggcgaccccga 869
>gb|AC109601.9| Oryza sativa chromosome 3 BAC OSJNBa0004G03 genomic sequence, complete sequence Length = 145590 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 24 cccaggggcgacacgggcggcgac 47 |||||||||||||||| ||||||| Sbjct: 95451 cccaggggcgacacggacggcgac 95428
>ref|XM_613058.2| PREDICTED: Bos taurus similar to Golgi autoantigen, golgin subfamily a, 3 (LOC533600), mRNA Length = 4586 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 434 tctgctctttcctgcgagtgcttc 457 |||||| ||||||||||||||||| Sbjct: 3722 tctgctatttcctgcgagtgcttc 3699
>gb|AC134931.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0079L11, complete sequence Length = 124104 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 26 caggggcgacacgggcggcgaccc 49 ||||||||||||||| |||||||| Sbjct: 84151 caggggcgacacgggaggcgaccc 84128
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 24 cccaggggcgacacgggcggcgac 47 |||||||||||||||| ||||||| Sbjct: 22500204 cccaggggcgacacggacggcgac 22500181 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 23 ccccaggggcgacacgggcggcga 46 ||||||||||||| |||||||||| Sbjct: 945330 ccccaggggcgacgcgggcggcga 945353
>emb|AL591787.1|SME591787 Sinorhizobium meliloti 1021 complete chromosome; segment 6/12 Length = 329100 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 219 ggcgacggccggcgcgtcgt 238 |||||||||||||||||||| Sbjct: 81734 ggcgacggccggcgcgtcgt 81753
>gb|AC123874.4| Mus musculus BAC clone RP23-265M17 from 6, complete sequence Length = 193712 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 67 gcgccccccaccctcctcctcccc 90 |||||||||||||||| ||||||| Sbjct: 147100 gcgccccccaccctccacctcccc 147077
>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence Length = 2726152 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 124 cgcgtggagctggcggcggcggggccgg 151 |||| ||||||||||||||||| ||||| Sbjct: 2034716 cgcgcggagctggcggcggcggcgccgg 2034689
>emb|BX842608.1|OSJN00298 Oryza sativa genomic DNA, chromosome 4, BAC clone: B1340F09, complete sequence Length = 149449 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 163 ccgcggcggcgtcctccacgagtt 186 |||||||||||| ||||||||||| Sbjct: 122448 ccgcggcggcgtgctccacgagtt 122425
>emb|BX572602.1| Rhodopseudomonas palustris CGA009 complete genome; segment 10/16 Length = 349981 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 128 tggagctggcggcggcgggg 147 |||||||||||||||||||| Sbjct: 34924 tggagctggcggcggcgggg 34943
>emb|AL662964.3|OSJN00161 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0027H09, complete sequence Length = 155672 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 163 ccgcggcggcgtcctccacgagtt 186 |||||||||||| ||||||||||| Sbjct: 74763 ccgcggcggcgtgctccacgagtt 74740
>gb|AE006464.1| Homo sapiens 16p13.3 sequence section 3 of 8 Length = 256073 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 70 ccccccaccctcctcctccc 89 |||||||||||||||||||| Sbjct: 177252 ccccccaccctcctcctccc 177271
>gb|AC149395.2| Phakopsora pachyrhizi clone JGIAFNA-61H11, complete sequence Length = 30962 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 70 ccccccaccctcctcctccc 89 |||||||||||||||||||| Sbjct: 11624 ccccccaccctcctcctccc 11605
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 23 ccccaggggcgacacgggcggcga 46 ||||||||||||| |||||||||| Sbjct: 13886403 ccccaggggcgacgcgggcggcga 13886426
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 163 ccgcggcggcgtcctccacg 182 |||||||||||||||||||| Sbjct: 26349487 ccgcggcggcgtcctccacg 26349468
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 79 ctcctcctcccctcgccgtcgccg 102 |||||||||||||||||| ||||| Sbjct: 3157348 ctcctcctcccctcgccgccgccg 3157371
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 26 caggggcgacacgggcggcgaccc 49 ||||||||||||||| |||||||| Sbjct: 1422489 caggggcgacacgggaggcgaccc 1422466 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 79 ctcctcctcccctcgccgtcgccg 102 |||||||||| ||||||||||||| Sbjct: 895004 ctcctcctccgctcgccgtcgccg 895027
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 24 cccaggggcgacacgggcggcgac 47 |||||||||||||||| ||||||| Sbjct: 22493233 cccaggggcgacacggacggcgac 22493210 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 23 ccccaggggcgacacgggcggcga 46 ||||||||||||| |||||||||| Sbjct: 945328 ccccaggggcgacgcgggcggcga 945351
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 23 ccccaggggcgacacgggcggcga 46 ||||||||||||| |||||||||| Sbjct: 22386883 ccccaggggcgacgcgggcggcga 22386906
>dbj|AB026295.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, clone:P0681F10 Length = 170371 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 79 ctcctcctcccctcgccgtcgccg 102 |||||||||||||||||| ||||| Sbjct: 111533 ctcctcctcccctcgccgccgccg 111556
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 163 ccgcggcggcgtcctccacg 182 |||||||||||||||||||| Sbjct: 372294 ccgcggcggcgtcctccacg 372275
>dbj|AP003546.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0672C09 Length = 145655 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 23 ccccaggggcgacacgggcggcga 46 ||||||||||||| |||||||||| Sbjct: 11021 ccccaggggcgacgcgggcggcga 11044
>dbj|AP002908.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0013G02 Length = 163419 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 23 ccccaggggcgacacgggcggcga 46 ||||||||||||| |||||||||| Sbjct: 84153 ccccaggggcgacgcgggcggcga 84176
>dbj|AP005156.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1729_E01 Length = 155527 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 26 caggggcgacacgggcggcgaccc 49 ||||||||||||||| |||||||| Sbjct: 110908 caggggcgacacgggaggcgaccc 110931
>dbj|AP003838.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1582_D10 Length = 103475 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 26 caggggcgacacgggcggcgaccc 49 ||||||||||||||| |||||||| Sbjct: 4636 caggggcgacacgggaggcgaccc 4659
>dbj|AP004015.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1770_H02 Length = 170648 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 163 ccgcggcggcgtcctccacg 182 |||||||||||||||||||| Sbjct: 79068 ccgcggcggcgtcctccacg 79049
>dbj|AK119230.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-111-B11, full insert sequence Length = 693 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 26 caggggcgacacgggcggcgaccc 49 ||||||||||||||| |||||||| Sbjct: 168 caggggcgacacgggaggcgaccc 145
>dbj|AK107172.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-124-G04, full insert sequence Length = 1544 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 163 ccgcggcggcgtcctccacgagtt 186 |||||||||||| ||||||||||| Sbjct: 605 ccgcggcggcgtgctccacgagtt 628
>emb|AJ337925.1|HSA337925 Homo sapiens genomic sequence surrounding NotI site, clone NL1-FG17R Length = 753 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 70 ccccccaccctcctcctccc 89 |||||||||||||||||||| Sbjct: 337 ccccccaccctcctcctccc 318
>emb|AJ338470.1|HSA338470 Homo sapiens genomic sequence surrounding NotI site, clone NR1-212R Length = 725 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 70 ccccccaccctcctcctccc 89 |||||||||||||||||||| Sbjct: 337 ccccccaccctcctcctccc 318
>dbj|AK105710.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-201-E09, full insert sequence Length = 1225 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 26 caggggcgacacgggcggcgaccc 49 ||||||||||||||| |||||||| Sbjct: 55 caggggcgacacgggaggcgaccc 78
>emb|AJ341036.1|HSA341036 Homo sapiens genomic sequence surrounding NotI site, clone NR5-KD5C Length = 665 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 70 ccccccaccctcctcctccc 89 |||||||||||||||||||| Sbjct: 337 ccccccaccctcctcctccc 318
>dbj|AK066755.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013075C21, full insert sequence Length = 976 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 79 ctcctcctcccctcgccgtcgccg 102 |||||||||||||||||| ||||| Sbjct: 74 ctcctcctcccctcgccgccgccg 51
>gb|AC155253.1| Mus musculus BAC clone RP24-172G9 from 17, complete sequence Length = 160193 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 73 cccaccctcctcctcccctc 92 |||||||||||||||||||| Sbjct: 37389 cccaccctcctcctcccctc 37408
>dbj|AK063078.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-110-H11, full insert sequence Length = 693 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 26 caggggcgacacgggcggcgaccc 49 ||||||||||||||| |||||||| Sbjct: 168 caggggcgacacgggaggcgaccc 145
>emb|CR381623.33| Zebrafish DNA sequence from clone DKEY-276G15 in linkage group 1, complete sequence Length = 159400 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 73 cccaccctcctcctcccctc 92 |||||||||||||||||||| Sbjct: 44331 cccaccctcctcctcccctc 44312
>gb|AC174800.2| Mus musculus BAC clone CH36-125B10 from chromosome 17, complete sequence Length = 178741 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 73 cccaccctcctcctcccctc 92 |||||||||||||||||||| Sbjct: 66813 cccaccctcctcctcccctc 66832
>dbj|AP001120.5| Homo sapiens genomic DNA, chromosome 18 clone:RP11-677O4, complete sequence Length = 181123 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 506 tggcctgactgggcttttgg 525 |||||||||||||||||||| Sbjct: 155533 tggcctgactgggcttttgg 155514
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 221 cgacggccggcgcgtcgtcg 240 |||||||||||||||||||| Sbjct: 2723152 cgacggccggcgcgtcgtcg 2723171
>gb|AE001825.1| Deinococcus radiodurans R1 chromosome 2, complete sequence Length = 412348 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 309 gctgctcggctgctgcgacg 328 |||||||||||||||||||| Sbjct: 337802 gctgctcggctgctgcgacg 337821
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 23 ccccaggggcgacacgggcggcga 46 ||||||||||||| |||||||||| Sbjct: 13840683 ccccaggggcgacgcgggcggcga 13840706
>emb|AL928747.3|CNS08CBK Oryza sativa chromosome 12, . BAC OSJNBa0017A21 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 144552 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 23 ccccaggggcgacacgggcggcga 46 ||||||||||||| |||||||||| Sbjct: 23031 ccccaggggcgacgcgggcggcga 23054
>emb|Z97653.14|HS380A1 Human DNA sequence from clone LA16c-380A1 on chromosome 16, complete sequence Length = 25042 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 70 ccccccaccctcctcctccc 89 |||||||||||||||||||| Sbjct: 11627 ccccccaccctcctcctccc 11646
>gb|AC129720.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0683F12, complete sequence Length = 144455 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 26 caggggcgacacgggcggcgaccc 49 ||||||||||||||| |||||||| Sbjct: 16569 caggggcgacacgggaggcgaccc 16546 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,031,122 Number of Sequences: 3902068 Number of extensions: 5031122 Number of successful extensions: 117419 Number of sequences better than 10.0: 74 Number of HSP's better than 10.0 without gapping: 79 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 114864 Number of HSP's gapped (non-prelim): 2555 length of query: 565 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 542 effective length of database: 17,143,297,704 effective search space: 9291667355568 effective search space used: 9291667355568 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)