>YPE1_RHORU (P23138) Hypothetical 28 kDa protein in petA 5'region|
          Length = 255

 Score = 30.0 bits (66), Expect = 4.1
 Identities = 17/43 (39%), Positives = 21/43 (48%)
 Frame = -1

Query: 420 PSLGASWSALAGRLVLRDAGRSSLTRLWSGDPLPRTSASSCRP 292
           P++G +W   A    LR A R   TR W G PL  T   + RP
Sbjct: 87  PAVGEAWRPCADA-GLRAAARPGGTRCWPGSPLGGTGPPTNRP 128

>ITB4_HUMAN (P16144) Integrin beta-4 precursor (GP150) (CD104 antigen)|
          Length = 1822

 Score = 29.6 bits (65), Expect = 5.4
 Identities = 15/41 (36%), Positives = 22/41 (53%)
 Frame = +1

Query: 7    LPRHDLPGPAGRHLLLQQVPHAHPGQEPGADGRHRVLASAA 129
            LPR   PGP G HL+  ++  A PG     +  HR+  ++A
Sbjct: 1429 LPRSATPGPPGEHLVNGRMDFAFPG---STNSLHRMTTTSA 1466

>DNAB_MYCLE (P46394) Replicative DNA helicase (EC 3.6.1.-) [Contains: Mle dnaB|
           intein]
          Length = 604

 Score = 29.6 bits (65), Expect = 5.4
 Identities = 16/33 (48%), Positives = 18/33 (54%)
 Frame = -1

Query: 426 PPPSLGASWSALAGRLVLRDAGRSSLTRLWSGD 328
           PP  L A  S L G L+ +DA    L RL SGD
Sbjct: 25  PPQDLAAEQSVLGGMLLSKDAIADVLERLRSGD 57

>DNB2_ADE02 (P03264) Early E2A DNA-binding protein|
          Length = 529

 Score = 29.3 bits (64), Expect = 7.1
 Identities = 24/61 (39%), Positives = 25/61 (40%)
 Frame = -1

Query: 483 GDARRP*DEADLVRGTSNSPPPSLGASWSALAGRLVLRDAGRSSLTRLWSGDPLPRTSAS 304
           G ARRP    D V   S SPPP        L  RL   D   SS   L    P PR S S
Sbjct: 18  GAARRPPTMED-VSSPSPSPPPPRAPPKKRLRRRLESEDEEDSSQDALVPRTPSPRPSTS 76

Query: 303 S 301
           +
Sbjct: 77  T 77

>RGS12_RAT (O08774) Regulator of G-protein signaling 12 (RGS12)|
          Length = 1387

 Score = 28.9 bits (63), Expect = 9.2
 Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 4/59 (6%)
 Frame = -1

Query: 450  LVRGTSNSPPPSLGASWSALAGRLVL---RDAGRSSL-TRLWSGDPLPRTSASSCRPRS 286
            LVR +    P  LGA  S+L G+ V+   RD  R  + T    G P+ ++SA +  PR+
Sbjct: 1075 LVRLSGEKEPLDLGAPISSLDGQRVILEERDPSRGKVSTEKQKGAPVKQSSAVNSSPRN 1133

>PLXA2_HUMAN (O75051) Plexin-A2 precursor (Semaphorin receptor OCT)|
          Length = 1909

 Score = 28.9 bits (63), Expect = 9.2
 Identities = 25/84 (29%), Positives = 30/84 (35%)
 Frame = +2

Query: 83  KNPEPTDDTEYSLAQLEILSFDTMSTYSDETEPSNGGDLEPTSRDNGXXXXXXXYRPYSA 262
           K P P DD    L   + L   T         P  G  L  TSRD         Y  YS 
Sbjct: 410 KAPVPIDDNFCGLDINQPLGGST---------PVEGLTLYTTSRDRMTSVASYVYNGYSV 460

Query: 263 IRTGPRSGDLGRHDEAEVRGSGSP 334
           +  G +SG L      ++R  G P
Sbjct: 461 VFVGTKSGKL-----KKIRADGPP 479


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.317    0.138    0.445 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 53,371,050
Number of Sequences: 219361
Number of extensions: 977246
Number of successful extensions: 3240
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3105
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3231
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4085413911
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)