Clone Name | bart44h02 |
---|---|
Clone Library Name | barley_pub |
>ZRP4_MAIZE (P47917) O-methyltransferase ZRP4 (EC 2.1.1.-) (OMT)| Length = 364 Score = 79.0 bits (193), Expect = 1e-14 Identities = 55/179 (30%), Positives = 85/179 (47%), Gaps = 9/179 (5%) Frame = +3 Query: 102 TDAELLQAQSDLWRHSLCYLTPMSLRCAVDLGVPTAIHRLGGAASPSELVAALSLPASKL 281 TD LL AQ +LW + ++ M+L+ A+ L + AIH GGAAS S++++ + L S++ Sbjct: 9 TDQSLLDAQLELWHTTFAFMKSMALKSAIHLRIADAIHLHGGAASLSQILSKVHLHPSRV 68 Query: 282 PFLARLLRQLATAGVFTSTDAG---------TYRLNPLSYLLVDGVRIDGDASQTAIVRA 434 L RL+R L T VF + G Y L P+S LL+ +QT + Sbjct: 69 SSLRRLMRVLTTTNVFGTQPLGGGSDDDSEPVYTLTPVSRLLIGSQ--SSQLAQTPLAAM 126 Query: 435 AASRHYVEAAMGLADWFRKDFDGAVPSPFEDVHGAAIFEESMALLDPGMDQLIHDAVAA 611 V L WF+ + P F+ HG I+E + D D L++D +A+ Sbjct: 127 VLDPTIVSPFSELGAWFQHELPD--PCIFKHTHGRGIWE--LTKDDATFDALVNDGLAS 181
>CVMT1_OCIBA (Q93WU3) Chavicol O-methyltransferase (EC 2.1.1.146) ((Iso)eugenol| O-methyltransferase CVOMT1) (S-adenosysl-L-methionine:(Iso)eugenol O-methyltransferase CVOMT1) Length = 356 Score = 64.7 bits (156), Expect = 2e-10 Identities = 39/152 (25%), Positives = 72/152 (47%), Gaps = 4/152 (2%) Frame = +3 Query: 111 ELLQAQSDLWRHSLCYLTPMSLRCAVDLGVPTAIHRLGGAASPSELVAALSLPASKLPFL 290 +LLQAQ+ +W H + MSL+CA+ LG+P +H+ + S+L+ A+ + K Sbjct: 14 QLLQAQAHVWNHMYAFANSMSLKCAIQLGIPDILHKHDHPMTLSQLLKAIPINKEKSQSF 73 Query: 291 ARLLRQLATAGVFTSTDAGT----YRLNPLSYLLVDGVRIDGDASQTAIVRAAASRHYVE 458 RL+R L + F ++ Y L P S LL+ G + + +V+ + Sbjct: 74 QRLMRALVNSNFFIEENSNNQEVCYWLTPASRLLLKGAPL----TVAPLVQVVLDPTFTN 129 Query: 459 AAMGLADWFRKDFDGAVPSPFEDVHGAAIFEE 554 +++WF+ + + FE +G +E+ Sbjct: 130 PWHYMSEWFKHENHA---TQFEAANGCTFWEK 158
>EOMT1_OCIBA (Q93WU2) Eugenol O-methyltransferase (EC 2.1.1.146) ((Iso)eugenol| O-methyltransferase EOMT1) (S-adenosysl-L-methionine:(Iso)eugenol O-methyltransferase EOMT1) Length = 357 Score = 63.9 bits (154), Expect = 3e-10 Identities = 43/165 (26%), Positives = 76/165 (46%), Gaps = 6/165 (3%) Frame = +3 Query: 78 AAEKVFVPTDAE-LLQAQSDLWRHSLCYLTPMSLRCAVDLGVPTAIHRLGGAASPSELVA 254 A +KV + E LLQAQ +W H + MSL+CA+ LG+P +H+ G + S+L+ Sbjct: 2 ALQKVDISLSTEQLLQAQVHVWNHMYAFANSMSLKCAIQLGIPDILHKHGRPMTLSQLLQ 61 Query: 255 ALSLPASKLPFLARLLRQLATAGVF-----TSTDAGTYRLNPLSYLLVDGVRIDGDASQT 419 ++ + K RL+R L + F ++ Y L P S LL+ + + T Sbjct: 62 SIPINKEKTQCFQRLMRALVNSNFFIEENNSNNQEVCYWLTPASCLLLK----EAPLTVT 117 Query: 420 AIVRAAASRHYVEAAMGLADWFRKDFDGAVPSPFEDVHGAAIFEE 554 +V+ + +++WF + + FE +G +E+ Sbjct: 118 PLVQVVLDPTFTNPWHHMSEWFTHEKHA---TQFEAANGCTFWEK 159
>7OMT9_MEDSA (O22309) Isoflavone-7-O-methytransferase 9 (EC 2.1.1.150)| (Isoflavone-O-methytransferase 9) (7 IOMT-9) Length = 352 Score = 60.8 bits (146), Expect = 3e-09 Identities = 36/96 (37%), Positives = 56/96 (58%), Gaps = 2/96 (2%) Frame = +3 Query: 108 AELLQAQSDLWRHSLCYLTPMSLRCAVDLGVPTAIHRLGGAASPSELVAALSLPASKLPF 287 +E+ +AQ+ L++H ++ MSL+ AV + +P IH G S S LV+ L +P+SK+ Sbjct: 11 SEIFKAQALLYKHIYAFIDSMSLKWAVGMNIPNIIHNHGKPISLSNLVSILQVPSSKIGN 70 Query: 288 LARLLRQLATAGVF--TSTDAGTYRLNPLSYLLVDG 389 + RL+R LA G F + + +Y L S LLV G Sbjct: 71 VRRLMRYLAHNGFFEIITKEEESYALTVASELLVRG 106
>7OMT8_MEDSA (O24529) Isoflavone-7-O-methytransferase 8 (EC 2.1.1.150)| (Isoflavone-O-methytransferase 8) (7-IOMT-8) Length = 352 Score = 58.9 bits (141), Expect = 1e-08 Identities = 35/96 (36%), Positives = 56/96 (58%), Gaps = 2/96 (2%) Frame = +3 Query: 108 AELLQAQSDLWRHSLCYLTPMSLRCAVDLGVPTAIHRLGGAASPSELVAALSLPASKLPF 287 +E+ +AQ+ L++H ++ MSL+ AV++ +P I G S S LV+ L +P+SK+ Sbjct: 11 SEIFKAQALLYKHIYAFIDSMSLKWAVEMNIPNIIQNHGKPISLSNLVSILQVPSSKIGN 70 Query: 288 LARLLRQLATAGVF--TSTDAGTYRLNPLSYLLVDG 389 + RL+R LA G F + + +Y L S LLV G Sbjct: 71 VRRLMRYLAHNGFFEIITKEEESYALTVASELLVRG 106
>7OMT6_MEDSA (O22308) Isoflavone-7-O-methytransferase 6 (EC 2.1.1.150)| (Isoflavone-O-methytransferase 6) (7-IOMT-6) Length = 352 Score = 58.9 bits (141), Expect = 1e-08 Identities = 35/96 (36%), Positives = 56/96 (58%), Gaps = 2/96 (2%) Frame = +3 Query: 108 AELLQAQSDLWRHSLCYLTPMSLRCAVDLGVPTAIHRLGGAASPSELVAALSLPASKLPF 287 +E+ +AQ+ L++H ++ MSL+ AV++ +P I G S S LV+ L +P+SK+ Sbjct: 11 SEIFKAQALLYKHIYAFIDSMSLKWAVEMNIPNIIQNHGKPISLSNLVSILQVPSSKIGN 70 Query: 288 LARLLRQLATAGVF--TSTDAGTYRLNPLSYLLVDG 389 + RL+R LA G F + + +Y L S LLV G Sbjct: 71 VRRLMRYLAHNGFFEIITKEEESYALTVASELLVRG 106
>COOMT_COPJA (Q8H9A8) Columbamine O-methyltransferase (EC 2.1.1.118) (CoOMT)| Length = 351 Score = 51.2 bits (121), Expect = 2e-06 Identities = 34/96 (35%), Positives = 49/96 (51%), Gaps = 5/96 (5%) Frame = +3 Query: 117 LQAQSDLWRHSLCYLTPMSLRCAVDLGVPTAIHRLGGAASPSELVAALSLPASKLPFLAR 296 ++AQ+ +W+H + + LR V LG+P IH G + S+LV L L ++ + Sbjct: 13 IKAQAQVWKHMFGFAETIMLRSTVSLGIPDIIHN-NGPVTLSQLVTHLPLKSTSIDRFHH 71 Query: 297 LLRQLATAGVFT-STDAGT----YRLNPLSYLLVDG 389 +R L +FT STD T Y L P S LLV G Sbjct: 72 FMRYLVHMQLFTISTDQITKEDKYELTPASKLLVHG 107
>6OMT_COPJA (Q9LEL6) (RS)-norcoclaurine 6-O-methyltransferase (EC 2.1.1.128)| (S-adenosyl-L-methionine:norcoclaurine 6-O-methyltransferase) (6-OMT) Length = 347 Score = 39.3 bits (90), Expect = 0.009 Identities = 44/169 (26%), Positives = 68/169 (40%), Gaps = 5/169 (2%) Frame = +3 Query: 117 LQAQSDLWRHSLCYLTPMSLRCAVDLGVPTAIHRLGGAASPSELVAALSLPASKLPFLAR 296 L +Q+ LW + + L+CAV L + IH G + + SEL + L L R Sbjct: 8 LSSQAKLWNFIYGFAESLVLKCAVQLDLANIIHNSGTSMTLSELSSRLPSQPVNEDALYR 67 Query: 297 LLRQLATAGVFTSTDAG---TYRLNPLSYLLVDGVRIDGDASQTAIVRAAASRHYVEAAM 467 ++R L +FT Y L P + LV G D + A + + Sbjct: 68 VMRYLVHMKLFTKASIDGELRYGLAPPAKYLVKG----WDKCMVGSILAITDKDF----- 118 Query: 468 GLADW-FRKD-FDGAVPSPFEDVHGAAIFEESMALLDPGMDQLIHDAVA 608 +A W + KD G + FE G I+ P +QL ++A+A Sbjct: 119 -MAPWHYLKDGLSGESGTAFEKALGTNIW--GYMAEHPEKNQLFNEAMA 164
>HXB5_MOUSE (P09079) Homeobox protein Hox-B5 (Hox-2.1) (MU-1) (H24.1)| Length = 269 Score = 35.8 bits (81), Expect = 0.10 Identities = 25/89 (28%), Positives = 41/89 (46%), Gaps = 2/89 (2%) Frame = -1 Query: 565 SAMLSSKMAAPCTSSNGEGTAPSKSFLNQSARPMAAST*WRE--AAARTMAVWLASPSMR 392 S LSS + PCT+ + G PS S + A P ++S + E A+ + A+ + Sbjct: 91 SCSLSSPESLPCTNGDSHGAKPSASSPSDQATPASSSANFTEIDEASASSEPEEAASQLS 150 Query: 391 TPSTRRYERGLRRYVPASVEVKTPAVASW 305 +PS R + A+ E +TP + W Sbjct: 151 SPSLARAQPEPMATSTAAPEGQTPQIFPW 179
>CCDC8_RAT (P62521) Probable Coiled-coil domain-containing protein 8| Length = 643 Score = 35.4 bits (80), Expect = 0.13 Identities = 39/148 (26%), Positives = 55/148 (37%), Gaps = 3/148 (2%) Frame = -1 Query: 607 ATASWMSWSIPGSRSAMLSSKMAAPCTSSNGEGTAPSKSFLNQSARPMAAST*WREAAAR 428 A AS + + R+ ++ A + E A ++ + R AA EAA Sbjct: 350 AAASPRAEAAANPRAEAAANPRAEATANPRAEAAANPRAEATANPRAEAAVNPRTEAAVN 409 Query: 427 TMAVWLASPSMRTPSTRRYERGLRRYVPASVEVKTPAVASWRSRRARNGSLDAG---RDR 257 A+P R E A V KT A AS R+ A + ++A R Sbjct: 410 PRTEAAANPRAEAAVNPRAEATASPRAEAEVNQKTEATASPRAETAASPRVEAAASLRVE 469 Query: 256 AATSSDGDAAPPRRWMAVGTPRSTAQRS 173 AA S +A R AV TPR+ S Sbjct: 470 AAASPRAEATVSPRAEAVATPRAETAAS 497 Score = 34.7 bits (78), Expect = 0.23 Identities = 36/148 (24%), Positives = 56/148 (37%), Gaps = 3/148 (2%) Frame = -1 Query: 607 ATASWMSWSIPGSRSAMLSSKMAAPCTSSNGEGTAPSKSFLNQSARPMAAST*WREAAAR 428 A AS + R+ ++ A + E A ++ S R AA+ EAAA Sbjct: 310 AAASQRPEAAASPRAEAAANPRAEATANPRAEAAANPRAEAAASPRAEAAANPRAEAAAN 369 Query: 427 TMAVWLASPSMRTPSTRRYERGLRRYVPASVEVKTPAVASWRSRRARNGSLDAG---RDR 257 A A+P + R E A+V +T A + R+ A N +A R Sbjct: 370 PRAEATANPRAEAAANPRAEATANPRAEAAVNPRTEAAVNPRTEAAANPRAEAAVNPRAE 429 Query: 256 AATSSDGDAAPPRRWMAVGTPRSTAQRS 173 A S +A ++ A +PR+ S Sbjct: 430 ATASPRAEAEVNQKTEATASPRAETAAS 457 Score = 30.8 bits (68), Expect = 3.3 Identities = 33/117 (28%), Positives = 46/117 (39%), Gaps = 3/117 (2%) Frame = -1 Query: 523 SNGEGTAPSKSFLNQSARPMAAST*WREAAARTMAVWLASPSMRTPSTRRYERGLRRYVP 344 ++G P ++ NQ A AA+ EAAA ASP + R E Sbjct: 284 AHGTAEEPPEAAENQGAG--AAAEHGVEAAASQRPEAAASPRAEAAANPRAEATANPRAE 341 Query: 343 ASVEVKTPAVASWRSRRARNGSLDAG---RDRAATSSDGDAAPPRRWMAVGTPRSTA 182 A+ + A AS R+ A N +A R A + +AA R A PR+ A Sbjct: 342 AAANPRAEAAASPRAEAAANPRAEAAANPRAEATANPRAEAAANPRAEATANPRAEA 398
>4OMT_COPJA (Q9LEL5) 3'-hydroxy-N-methyl-(S)-coclaurine 4'-O-methyltransferase| (EC 2.1.1.116) (S-adenosyl-L-methionine:3'-hydroxy-N-methylcoclaurine 4'-O-methyltransferase) (4'-OMT) Length = 350 Score = 34.7 bits (78), Expect = 0.23 Identities = 25/92 (27%), Positives = 44/92 (47%), Gaps = 4/92 (4%) Frame = +3 Query: 117 LQAQSDLWRHSLCYLTPMSLRCAVDLGVPTAIHRLGGAASPSELVAALSLPASKLPFLAR 296 ++AQ+ +W+ + + LRCAV+LG+ I + ++L + L + L R Sbjct: 12 IKAQAHVWKIIYGFADSLVLRCAVELGIVDIIDNNNQPMALADLASKLPVSDVNCDNLYR 71 Query: 297 LLRQLATAGVF--TSTDAG--TYRLNPLSYLL 380 +LR L + +D G Y L P++ LL Sbjct: 72 ILRYLVKMEILRVEKSDDGQKKYALEPIATLL 103
>BGLT_THEMA (Q9X108) 6-phospho-beta-glucosidase bglT (EC 3.2.1.86)| Length = 415 Score = 34.3 bits (77), Expect = 0.29 Identities = 15/46 (32%), Positives = 26/46 (56%), Gaps = 6/46 (13%) Frame = -3 Query: 545 DGGAVHVLERRGHGPVEVLPE------PVGQAHGRLHVVARGRGAH 426 D G +H++ R +G +E LP+ P GR+H +++G+G H Sbjct: 308 DEGKIHIVNTRNNGSIENLPDDYVLEIPCYVRSGRVHTLSQGKGDH 353
>OMT1_ARATH (Q9FK25) Quercetin 3-O-methyltransferase 1 (EC 2.1.1.76) (AtOMT1)| (Flavonol 3-O-methyltransferase 1) Length = 363 Score = 33.1 bits (74), Expect = 0.66 Identities = 38/166 (22%), Positives = 68/166 (40%), Gaps = 6/166 (3%) Frame = +3 Query: 72 GQAAEKVFVPTDAELLQAQSDLWRHSLCYLTPMSLRCAVDLGVPTAIHRLGGAASPSELV 251 G AE P +A + + + PM+L+ A++L + + + G SP+E+ Sbjct: 2 GSTAETQLTPVQVTDDEAALFAMQLASASVLPMALKSALELDLLEIMAKNGSPMSPTEIA 61 Query: 252 AALSLPASKLP-FLARLLRQLATAGVFTSTDA-----GTYRLNPLSYLLVDGVRIDGDAS 413 + L + P L R+LR L + V T ++ G R+ L + + + S Sbjct: 62 SKLPTKNPEAPVMLDRILRLLTSYSVLTCSNRKLSGDGVERIYGLGPVCKYLTKNEDGVS 121 Query: 414 QTAIVRAAASRHYVEAAMGLADWFRKDFDGAVPSPFEDVHGAAIFE 551 A+ + +E+ L D DG + PF +G + FE Sbjct: 122 IAALCLMNQDKVLMESWYHLKDAI---LDGGI--PFNKAYGMSAFE 162
>HXB5_HUMAN (P09067) Homeobox protein Hox-B5 (Hox-2A) (HHO.C10) (HU-1)| Length = 269 Score = 32.7 bits (73), Expect = 0.86 Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 2/89 (2%) Frame = -1 Query: 565 SAMLSSKMAAPCTSSNGEGTAPSKSFLNQSARPMAAST*WRE--AAARTMAVWLASPSMR 392 S LSS + PCT+ + G PS S + A ++S + E A+ + A+ + Sbjct: 91 SCSLSSPESLPCTNGDSHGAKPSASSPSDQATSASSSANFTEIDEASASSEPEEAASQLS 150 Query: 391 TPSTRRYERGLRRYVPASVEVKTPAVASW 305 +PS R + A+ E +TP + W Sbjct: 151 SPSLARAQPEPMATSTAAPEGQTPQIFPW 179
>SRRM1_CHICK (Q5ZMJ9) Serine/arginine repetitive matrix protein 1| Length = 888 Score = 32.3 bits (72), Expect = 1.1 Identities = 41/141 (29%), Positives = 59/141 (41%), Gaps = 11/141 (7%) Frame = -1 Query: 568 RSAMLSSK--MAAPCTSSNGEGTAPSKSFLNQ-SARPMAAST*WREAAARTMAVWLASPS 398 RS +SSK +P + SN E +P ++ + S RP A+ T R A ASP Sbjct: 645 RSPSISSKHRKGSPPSRSNRETRSPPQNKRDSPSPRPRASHTSSSPPPLRRGAS--ASPQ 702 Query: 397 MR---TPSTRRYERGLRRYVPASVEVKTPAVASWR---SRRARNGSLDAG--RDRAATSS 242 R +PSTR R R P + TP+ S R S R+ +GS + + + S Sbjct: 703 RRQSPSPSTRPIRRVSRTPEPKKTKASTPSPRSARRVSSSRSASGSPEPAPKKHQGPPSP 762 Query: 241 DGDAAPPRRWMAVGTPRSTAQ 179 +P W +S Q Sbjct: 763 ARSRSPSANWSPAKKAKSPTQ 783
>IEMT_CLABR (O04385) (Iso)eugenol O-methyltransferase (EC 2.1.1.146)| (S-adenosysl-L-methionine:(Iso)eugenol O-methyltransferase) (IEMT) Length = 368 Score = 32.3 bits (72), Expect = 1.1 Identities = 27/90 (30%), Positives = 44/90 (48%), Gaps = 4/90 (4%) Frame = +3 Query: 81 AEKVFVPTDAELLQAQSDLWRHSLCYLTPMSLRCAVDLGVPTAIHRL---GGAASPSELV 251 AE +PT + +A + + + PM+L+ A++L V + + G SP+E+ Sbjct: 7 AEIQIIPTHSSDEEANLFAMQLASAAVLPMALKAAIELDVLEIMAKSVPPSGYISPAEIA 66 Query: 252 AALSLPASKLP-FLARLLRQLATAGVFTST 338 A L + P L R+LR LA+ V T T Sbjct: 67 AQLPTTNPEAPVMLDRVLRLLASYSVVTYT 96
>TOP1_TREPA (O83409) DNA topoisomerase 1 (EC 5.99.1.2) (DNA topoisomerase I)| (Omega-protein) (Relaxing enzyme) (Untwisting enzyme) (Swivelase) Length = 731 Score = 31.6 bits (70), Expect = 1.9 Identities = 20/67 (29%), Positives = 36/67 (53%) Frame = +3 Query: 270 ASKLPFLARLLRQLATAGVFTSTDAGTYRLNPLSYLLVDGVRIDGDASQTAIVRAAASRH 449 A++L F +R Q+A ++ GT+R+ ++Y+ D VR+ A + VRA + H Sbjct: 279 ANRLGFTSRKTMQVAQQ-LYEGVSLGTHRVGLITYMRTDSVRVSEAAVKE--VRAWIATH 335 Query: 450 YVEAAMG 470 + +A G Sbjct: 336 FSDALPG 342
>IE18_PRVKA (P33479) Immediate-early protein IE180| Length = 1446 Score = 30.0 bits (66), Expect = 5.6 Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 3/47 (6%) Frame = -1 Query: 304 RSRRARNGSLDAGRDRAATS---SDGDAAPPRRWMAVGTPRSTAQRS 173 R RRA G+L GR +++S SD D +P R A P + A+RS Sbjct: 331 RRRRAGEGALRRGRGFSSSSSSGSDSDLSPARSPSAPRAPAAAARRS 377
>ATRX_DROME (Q9GQN5) Transcriptional regulator ATRX homolog (EC 3.6.1.-)| (ATP-dependent helicase XNP) (X-linked nuclear protein) (dXNP) (d-xnp) Length = 1311 Score = 30.0 bits (66), Expect = 5.6 Identities = 31/123 (25%), Positives = 50/123 (40%) Frame = -1 Query: 583 SIPGSRSAMLSSKMAAPCTSSNGEGTAPSKSFLNQSARPMAAST*WREAAARTMAVWLAS 404 S+ G+R LSS+ ++ +SS E K + + R T + A + + S Sbjct: 214 SVNGTRRGSLSSERSSRASSSRAESPPRPKRCVVRLKRVSLPKT---KPAQKPKKMSSDS 270 Query: 403 PSMRTPSTRRYERGLRRYVPASVEVKTPAVASWRSRRARNGSLDAGRDRAATSSDGDAAP 224 T S + +R + A + + PA A R S D + AA SSD + P Sbjct: 271 EEAATTSKKSRQRRSKSESEADSDYEAPA-AEEEEEEERKSSGD--EEEAANSSDSEVMP 327 Query: 223 PRR 215 R+ Sbjct: 328 QRK 330
>DMPM_STRMI (P42712) O-demethylpuromycin-O-methyltransferase (EC 2.1.1.38)| Length = 376 Score = 30.0 bits (66), Expect = 5.6 Identities = 32/93 (34%), Positives = 42/93 (45%), Gaps = 1/93 (1%) Frame = +3 Query: 156 YLTPMSLRCAVDLGVPTAIHRLGGAASPSELVAALSL-PASKLPFLARLLRQLATAGVFT 332 Y++ L A L +P + AA+ EL A+L P + L RLLR A G+ Sbjct: 51 YISSEILDLATRLDLPDLMGTEERAAA--ELAASLDTDPVATL----RLLRAFAALGLAE 104 Query: 333 STDAGTYRLNPLSYLLVDGVRIDGDASQTAIVR 431 T AG +RL P + L R D S A VR Sbjct: 105 ETGAGRFRLTPAGHRL----RTDVPDSLHAFVR 133
>SMUF1_DROME (Q9V853) E3 ubiquitin-protein ligase Smurf1 (EC 6.3.2.-) (Smad| ubiquitination regulatory factor 1 homolog) (DSmurf) (Lethal with a checkpoint kinase protein) Length = 1061 Score = 29.6 bits (65), Expect = 7.2 Identities = 35/127 (27%), Positives = 47/127 (37%), Gaps = 3/127 (2%) Frame = -1 Query: 529 TSSNGEGTAPSKSFLNQSARPMAAST*WREAAARTMAVWLASPSMRTPSTRRYERGLRRY 350 TS NG G Q+A+P +AS W + A T SPS T R + Sbjct: 368 TSGNGSG---------QAAQPQSASNGWTQEDAAT----TTSPSTTTSPPRHSQSPPTPN 414 Query: 349 VPASVEVKTPAVASWRSRRARN---GSLDAGRDRAATSSDGDAAPPRRWMAVGTPRSTAQ 179 + V A + S A + GS R A ++ G + R G ST + Sbjct: 415 ISPPASVTPSANGNVHSPNANSTPAGSGGGSRSYTA-ATPGQRSQRRSSRQQGEESSTRR 473 Query: 178 RSDMGVR 158 RS G R Sbjct: 474 RSSRGTR 480
>SYL_STRAW (Q82C66) Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine--tRNA ligase)| (LeuRS) Length = 962 Score = 29.6 bits (65), Expect = 7.2 Identities = 19/50 (38%), Positives = 24/50 (48%) Frame = +3 Query: 222 GGAASPSELVAALSLPASKLPFLARLLRQLATAGVFTSTDAGTYRLNPLS 371 GG A+P+E VAA A+ + R GVFT G Y NP+S Sbjct: 362 GGHATPAEAVAAYRAQAASKSDVERQAEAKDKTGVFT----GAYATNPVS 407
>ITF2_HUMAN (P15884) Transcription factor 4 (Immunoglobulin transcription| factor 2) (ITF-2) (SL3-3 enhancer factor 2) (SEF-2) Length = 667 Score = 29.6 bits (65), Expect = 7.2 Identities = 18/56 (32%), Positives = 27/56 (48%) Frame = -3 Query: 575 RVEERHALLEDGGAVHVLERRGHGPVEVLPEPVGQAHGRLHVVARGRGAHDGRLAG 408 R+E+R L+D A+HVL GP +P G HG + +H+G + G Sbjct: 385 RIEDRLERLDD--AIHVLRNHAVGPSTAMPGGHGDMHGII------GPSHNGAMGG 432
>ITF2_CANFA (P15881) Transcription factor 4 (Immunoglobulin transcription| factor 2) (ITF-2) (Thyroglobulin promoter transcription factor TFE) Length = 642 Score = 29.6 bits (65), Expect = 7.2 Identities = 18/56 (32%), Positives = 27/56 (48%) Frame = -3 Query: 575 RVEERHALLEDGGAVHVLERRGHGPVEVLPEPVGQAHGRLHVVARGRGAHDGRLAG 408 R+E+R L+D A+HVL GP +P G HG + +H+G + G Sbjct: 360 RIEDRLERLDD--AIHVLRNHAVGPSTAMPGGHGDMHGII------GPSHNGAMGG 407
>RISB2_RHIME (Q92NI1) 6,7-dimethyl-8-ribityllumazine synthase 2 (EC 2.5.1.9)| (DMRL synthase 2) (Lumazine synthase 2) (Riboflavin synthase 2 beta chain) Length = 157 Score = 29.6 bits (65), Expect = 7.2 Identities = 29/100 (29%), Positives = 47/100 (47%), Gaps = 6/100 (6%) Frame = +3 Query: 216 RLGGAASPSELV---AALSLPASKLPFLARLLRQLATAGVFTSTDAGTYRLNPLSYLLVD 386 +LGG+A+ E+ AL +P LAR R A G + G YR + +S ++D Sbjct: 36 KLGGSAADVEIFDVPGALEIPLHAQA-LARTGRYAAILGTAFVVNGGIYRHDFVSGTVLD 94 Query: 387 G---VRIDGDASQTAIVRAAASRHYVEAAMGLADWFRKDF 497 G V++D D ++ A + H + + L +FR F Sbjct: 95 GMMRVQLDTD---VPVLSAVLTPHNFQESEPLIAFFRDHF 131
>VND_DROME (P22808) Homeobox protein vnd (Protein ventral nervous system| defective) (Homeobox protein NK-2) Length = 723 Score = 29.6 bits (65), Expect = 7.2 Identities = 26/82 (31%), Positives = 34/82 (41%), Gaps = 13/82 (15%) Frame = -1 Query: 283 GSLDAGRDRAATSSDGDAAPPRRWMAVGTP-----RSTAQRSDMGVR*QRLWRHRSD--- 128 GSL A A T S A P+R + TP R R D R +R RH D Sbjct: 30 GSLPASPQSAITVSPSSPATPKRPLRTSTPSLERKREREDREDREDRKERQERHERDRDH 89 Query: 127 -----CAWSSSASVGTNTFSAA 77 ++S +V TNT S++ Sbjct: 90 ERFAAVFSTASTTVPTNTSSSS 111
>RBN_NEIMB (Q9K0R0) tRNA-processing ribonuclease BN (EC 3.1.-.-) (RNase BN)| Length = 406 Score = 29.3 bits (64), Expect = 9.5 Identities = 25/90 (27%), Positives = 37/90 (41%) Frame = +3 Query: 270 ASKLPFLARLLRQLATAGVFTSTDAGTYRLNPLSYLLVDGVRIDGDASQTAIVRAAASRH 449 AS P + LR AT T G YR P ++ ++ A V A A+ Sbjct: 170 ASGAPQWSGALRTAATLTFMTLLLWGLYRFVPNRFV----------PARQAFVGALATAF 219 Query: 450 YVEAAMGLADWFRKDFDGAVPSPFEDVHGA 539 +E A L W+ +FDG + ++GA Sbjct: 220 CLETARSLFTWYMGNFDG-----YRSIYGA 244
>PCDH8_HUMAN (O95206) Protocadherin-8 precursor (Arcadlin)| Length = 1070 Score = 29.3 bits (64), Expect = 9.5 Identities = 17/37 (45%), Positives = 20/37 (54%) Frame = -3 Query: 533 VHVLERRGHGPVEVLPEPVGQAHGRLHVVARGRGAHD 423 V VL++ H PV V P P A+G L V GR A D Sbjct: 597 VRVLDQNDHAPVLVHPAP---ANGSLEVAVPGRTAKD 630
>RBN_NEIMA (Q9JVT9) tRNA-processing ribonuclease BN (EC 3.1.-.-) (RNase BN)| Length = 408 Score = 29.3 bits (64), Expect = 9.5 Identities = 25/90 (27%), Positives = 37/90 (41%) Frame = +3 Query: 270 ASKLPFLARLLRQLATAGVFTSTDAGTYRLNPLSYLLVDGVRIDGDASQTAIVRAAASRH 449 AS P + LR AT T G YR P ++ ++ A V A A+ Sbjct: 170 ASGAPQWSGALRTAATLTFMTLLLWGLYRFVPNRFV----------PARQAFVGALATAF 219 Query: 450 YVEAAMGLADWFRKDFDGAVPSPFEDVHGA 539 +E A L W+ +FDG + ++GA Sbjct: 220 CLETARSLFTWYMGNFDG-----YRSIYGA 244
>MMPLD_STRCO (Q9XA86) Putative membrane protein SCO0839| Length = 705 Score = 29.3 bits (64), Expect = 9.5 Identities = 34/101 (33%), Positives = 51/101 (50%), Gaps = 12/101 (11%) Frame = +3 Query: 207 AIHRLGGAASPSELVAALSLPASKLPFLARLLRQLATAGVFTS---TDAGTYRLNPLSYL 377 A H GG+ +P+ ++A A +L + R R T GV ++ TD+G R + L Sbjct: 416 AEHFPGGSGNPAVVIAE----ADRLDPVLRAARD--TRGVASAAPVTDSG--RPGAGTPL 467 Query: 378 LVDG-VRIDG--------DASQTAIVRAAASRHYVEAAMGL 473 +VDG VRID DA+++ +VR A+ H V A L Sbjct: 468 VVDGRVRIDATLEAPADSDAAKSTVVRLRAAVHEVSGADAL 508
>MTMW_METWO (O59647) Modification methylase MwoI (EC 2.1.1.113) (N-4| cytosine-specific methyltransferase MwoI) (M.MwoI) Length = 668 Score = 29.3 bits (64), Expect = 9.5 Identities = 15/29 (51%), Positives = 19/29 (65%) Frame = +3 Query: 480 WFRKDFDGAVPSPFEDVHGAAIFEESMAL 566 WFRKDF G++P P EDV + EE + L Sbjct: 589 WFRKDFGGSIPLP-EDV---TLLEEILKL 613 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 52,126,989 Number of Sequences: 219361 Number of extensions: 1018460 Number of successful extensions: 4567 Number of sequences better than 10.0: 31 Number of HSP's better than 10.0 without gapping: 4432 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4550 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5481822624 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)