No.
Definition
Score (bits)
E Value
1 gb|AC135258.2| Oryza sativa (japonica cultivar-group) chromosome...
139
1e-29
2 gb|AC147811.2| Oryza sativa (japonica cultivar-group) chromosome...
139
1e-29
3 dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D...
139
1e-29
4 gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome...
139
1e-29
5 gb|AC112208.3| Oryza sativa (japonica cultivar-group) chromosome...
127
5e-26
6 gb|AC138195.2| Oryza sativa (japonica cultivar-group) chromosome...
123
7e-25
7 gb|AC135793.4| Oryza sativa chromosome 11 BAC clone OSJNBb0017P1...
123
7e-25
8 dbj|AK106179.1| Oryza sativa (japonica cultivar-group) cDNA clon...
123
7e-25
9 dbj|AK059770.1| Oryza sativa (japonica cultivar-group) cDNA clon...
123
7e-25
10 dbj|AK109384.2| Oryza sativa (japonica cultivar-group) cDNA clon...
119
1e-23
11 dbj|AK061247.1| Oryza sativa (japonica cultivar-group) cDNA clon...
103
7e-19
12 gb|AY177404.1| Secale cereale O-methyltransferase mRNA, complete...
86
2e-13
13 gb|AY107519.1| Zea mays PCO078033 mRNA sequence
84
6e-13
14 dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D...
58
4e-05
15 dbj|AP005822.3| Oryza sativa (japonica cultivar-group) genomic D...
58
4e-05
16 dbj|AP005695.3| Oryza sativa (japonica cultivar-group) genomic D...
58
4e-05
17 dbj|AP004862.3| Oryza sativa (japonica cultivar-group) genomic D...
54
6e-04
18 dbj|AP004994.2| Oryza sativa (japonica cultivar-group) genomic D...
54
6e-04
19 ref|NM_191262.1| Oryza sativa (japonica cultivar-group), predic...
52
0.002
20 dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D...
52
0.002
21 dbj|AP003268.4| Oryza sativa (japonica cultivar-group) genomic D...
52
0.002
22 dbj|AP003249.3| Oryza sativa (japonica cultivar-group) genomic D...
52
0.002
23 gb|AY103669.1| Zea mays PCO073521 mRNA sequence
50
0.009
24 gb|AF033496.1|AF033496 Zea mays herbicide safener binding protei...
50
0.009
25 gb|AC134925.4| Oryza sativa (japonica cultivar-group) chromosome...
46
0.14
26 gb|AC136481.6| Oryza sativa (japonica cultivar-group) chromosome...
46
0.14
27 emb|AL591985.1|RME591985 Sinorhizobium meliloti 1021 complete pSymB
46
0.14
28 dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
46
0.14
29 gb|BT018658.1| Zea mays clone EL01N0508E09.d mRNA sequence
44
0.53
30 gb|BT017349.1| Zea mays clone EL01N0323G05.c mRNA sequence
44
0.53
31 gb|AY658658.1| Synthetic construct Peudomonas aeruginosa clone F...
44
0.53
32 ref|XM_954507.1| Neurospora crassa OR74A hypothetical protein (N...
44
0.53
33 ref|XM_331193.1| Neurospora crassa OR74A hypothetical protein (N...
44
0.53
34 emb|BX052119.1|CNS09CDN Single read from an extremity of a full-...
44
0.53
35 gb|AE012128.1| Xanthomonas campestris pv. campestris str. ATCC 3...
44
0.53
36 gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, ...
44
0.53
37 gb|AE004715.1| Pseudomonas aeruginosa PAO1, section 276 of 529 o...
44
0.53
38 gb|AY957390.1| Pseudomonas stutzeri NosL (nosL), NosY (nosY), an...
44
0.53
39 dbj|AP003573.3| Oryza sativa (japonica cultivar-group) genomic D...
44
0.53
40 dbj|AP005386.3| Oryza sativa (japonica cultivar-group) genomic D...
44
0.53
41 emb|X67324.1|ZMFS18 Z.mays MFS18 mRNA
44
0.53
42 ref|XM_317180.2| Anopheles gambiae str. PEST ENSANGP00000018332 ...
44
0.53
43 dbj|AK058562.1| Oryza sativa (japonica cultivar-group) cDNA clon...
44
0.53
44 gb|AY106835.1| Zea mays PCO070523 mRNA sequence
44
0.53
45 gb|AY104342.1| Zea mays PCO097811 mRNA sequence
44
0.53
46 gb|AY103988.1| Zea mays PCO070524 mRNA sequence
44
0.53
47 gb|AY714813.1| Cercopithecine herpesvirus 2, complete genome
42
2.1
48 gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, co...
42
2.1
49 gb|AC108870.2| Oryza sativa (japonica cultivar-group) chromosome...
42
2.1
50 gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
42
2.1
51 emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromos...
42
2.1
52 gb|AF533768.1| Cercopithecine herpesvirus 1 strain E2490, comple...
42
2.1
53 gb|AC116603.1| Oryza sativa (japonica cultivar-group) chromosome...
42
2.1
54 dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, c...
42
2.1
55 ref|XM_699726.1| PREDICTED: Danio rerio hypothetical protein LOC...
42
2.1
56 gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, comp...
42
2.1
57 dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D...
42
2.1
58 emb|BX545913.21| Zebrafish DNA sequence from clone DKEY-208P1 in...
42
2.1
59 gb|DQ149153.1| Cercopithecine herpesvirus 16 strain X313, comple...
42
2.1
60 dbj|AB096160.1| Cercopithecine herpesvirus 1 DNA, UL region, com...
42
2.1
61 gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete...
42
2.1
62 gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome...
42
2.1
63 ref|NM_195472.1| Oryza sativa (japonica cultivar-group) putative...
40
8.3
64 ref|XM_467235.1| Oryza sativa (japonica cultivar-group), mRNA
40
8.3
65 gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence
40
8.3
66 ref|XM_469628.1| Oryza sativa (japonica cultivar-group), mRNA
40
8.3
67 ref|XM_479432.1| Oryza sativa (japonica cultivar-group), mRNA
40
8.3
68 ref|XM_479431.1| Oryza sativa (japonica cultivar-group), mRNA
40
8.3
69 gb|AC092387.6| Oryza sativa (japonica cultivar-group) chromosome...
40
8.3
70 gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete ...
40
8.3
71 ref|XM_598392.2| PREDICTED: Bos taurus similar to homeodomain in...
40
8.3
72 ref|XM_585828.2| PREDICTED: Bos taurus hypothetical LOC508965 (L...
40
8.3
73 gb|AC144700.2| Oryza sativa (japonica cultivar-group) chromosome...
40
8.3
74 gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 compl...
40
8.3
75 gb|BC116031.1| Bos taurus cDNA clone MGC:139028 IMAGE:8095211, c...
40
8.3
76 gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
40
8.3
77 gb|AY387483.1| Oryza sativa (japonica cultivar-group) BAC OSJNBa...
40
8.3
78 gb|AC106128.6| Rattus norvegicus 1 BAC CH230-149H17 (Children's ...
40
8.3
79 emb|BX640437.1| Bordetella bronchiseptica strain RB50, complete ...
40
8.3
80 emb|BX640423.1| Bordetella parapertussis strain 12822, complete ...
40
8.3
81 emb|BX640422.1| Bordetella pertussis strain Tohama I, complete g...
40
8.3
82 dbj|AK061856.1| Oryza sativa (japonica cultivar-group) cDNA clon...
40
8.3
83 gb|AE012325.1| Xanthomonas campestris pv. campestris str. ATCC 3...
40
8.3
84 gb|AC092172.3| Oryza sativa (japonica cultivar-group) chromosome...
40
8.3
85 dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ...
40
8.3
86 ref|XM_944210.1| PREDICTED: Homo sapiens hypothetical LOC90024 (...
40
8.3
87 ref|XM_028217.4| PREDICTED: Homo sapiens hypothetical LOC90024 (...
40
8.3
88 gb|AE016814.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10...
40
8.3
89 gb|AC118133.4| Oryza sativa chromosome 3 BAC OSJNBb0016H12 genom...
40
8.3
90 dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D...
40
8.3
91 dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D...
40
8.3
92 dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D...
40
8.3
93 dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co...
40
8.3
94 gb|AY204470.1| Myxococcus xanthus clone C1255 adventurous glidin...
40
8.3
95 gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
40
8.3
96 dbj|AP005452.5| Oryza sativa (japonica cultivar-group) genomic D...
40
8.3
97 dbj|AP003825.3| Oryza sativa (japonica cultivar-group) genomic D...
40
8.3
98 dbj|AP004358.5| Oryza sativa (japonica cultivar-group) genomic D...
40
8.3
99 dbj|AP004096.3| Oryza sativa (japonica cultivar-group) genomic D...
40
8.3
100 dbj|AK000028.1| Homo sapiens cDNA FLJ20021 fis, clone ADSE01233
40
8.3
101 dbj|AK110831.1| Oryza sativa (japonica cultivar-group) cDNA clon...
40
8.3
102 dbj|AK107619.1| Oryza sativa (japonica cultivar-group) cDNA clon...
40
8.3
103 dbj|AK104614.1| Oryza sativa (japonica cultivar-group) cDNA clon...
40
8.3
104 dbj|AK070585.1| Oryza sativa (japonica cultivar-group) cDNA clon...
40
8.3
105 ref|NM_207823.1| Eremothecium gossypii AAL072Cp (AAL072C), mRNA
40
8.3
106 emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome comple...
40
8.3
107 emb|CT025832.1| Acinetobacter baumannii str. AYE. Genomics of Mu...
40
8.3
108 gb|AE015451.1| Pseudomonas putida KT2440 complete genome
40
8.3
109 gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ...
40
8.3
110 emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome
40
8.3
111 dbj|AP001816.2| Homo sapiens genomic DNA, chromosome 4q22-q24, c...
40
8.3
>dbj|AP008217.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
sequence
Length = 28386948
Score = 139 bits (70), Expect = 1e-29
Identities = 115/130 (88%)
Strand = Plus / Minus
Query: 99 cccaccgacgcggagctgctccaggcgcagtccgacctgtggcgccacagcctctgctac 158
||||||||||| |||||||| || || ||| ||||||| |||||||||||| ||| ||||
Sbjct: 7139013 cccaccgacgctgagctgctgcaagcacaggccgacctatggcgccacagcttctcctac 7138954
Query: 159 ctcacgcccatgtcgctccgctgcgccgtcgacctcggcgtccccacggccatccaccgc 218
|||||| ||||| ||||||||||||||| | | |||||| ||||||| ||||||||||||
Sbjct: 7138953 ctcacggccatggcgctccgctgcgccgccaagctcggcatccccaccgccatccaccgc 7138894
Query: 219 ctcggcggcg 228
||||||||||
Sbjct: 7138893 ctcggcggcg 7138884
Score = 127 bits (64), Expect = 5e-26
Identities = 166/200 (83%)
Strand = Plus / Minus
Query: 91 tgttcgtccccaccgacgcggagctgctccaggcgcagtccgacctgtggcgccacagcc 150
|||| ||||| ||||||| ||| |||| || ||||| |||| ||||||||||||| ||
Sbjct: 11303067 tgttggtcccgaccgacgacgagatgctgcaaacgcaggccgagctgtggcgccacaccc 11303008
Query: 151 tctgctacctcacgcccatgtcgctccgctgcgccgtcgacctcggcgtccccacggcca 210
||| ||||||||| ||||| | ||||| ||||||||| |||||||| ||||||| ||||
Sbjct: 11303007 tctcctacctcacctccatgactctccggtgcgccgtccacctcggcatccccaccgcca 11302948
Query: 211 tccaccgcctcggcggcgccgcgtccccgtccgaactggtcgccgccctgtccctgcccg 270
||||||||| |||||||||||| || | | |||| || ||| |||| |||||||| |||
Sbjct: 11302947 tccaccgccacggcggcgccgcctcgctgcccgacctcgtcaccgcgctgtccctcccca 11302888
Query: 271 cgtccaagctgccgttcctc 290
|| ||||||| || ||||||
Sbjct: 11302887 cggccaagctccccttcctc 11302868
Score = 123 bits (62), Expect = 7e-25
Identities = 119/138 (86%)
Strand = Plus / Minus
Query: 99 cccaccgacgcggagctgctccaggcgcagtccgacctgtggcgccacagcctctgctac 158
||||| ||||| |||||||| || |||||| |||| ||||||||||||||||||| ||||
Sbjct: 11494867 cccactgacgctgagctgctgcaagcgcaggccgatctgtggcgccacagcctctactac 11494808
Query: 159 ctcacgcccatgtcgctccgctgcgccgtcgacctcggcgtccccacggccatccaccgc 218
||||| ||| | |||||||||||| || | || ||| ||||||| ||||||||||||
Sbjct: 11494807 ctcacctccacgggactccgctgcgccatcaagctgggcatccccaccgccatccaccgc 11494748
Query: 219 ctcggcggcgccgcgtcc 236
||||||||||||||||||
Sbjct: 11494747 ctcggcggcgccgcgtcc 11494730
Score = 119 bits (60), Expect = 1e-23
Identities = 96/108 (88%)
Strand = Plus / Plus
Query: 120 caggcgcagtccgacctgtggcgccacagcctctgctacctcacgcccatgtcgctccgc 179
||||||||| || ||||||||||||||||||||| ||||||||| ||||| |||||||
Sbjct: 11482291 caggcgcaggccaacctgtggcgccacagcctctactacctcacctccatggcgctccgg 11482350
Query: 180 tgcgccgtcgacctcggcgtccccacggccatccaccgcctcggcggc 227
||||||||| | |||||| ||||||| | |||||||||||||||||||
Sbjct: 11482351 tgcgccgtcaagctcggcatccccacagtcatccaccgcctcggcggc 11482398
Score = 103 bits (52), Expect = 7e-19
Identities = 136/164 (82%)
Strand = Plus / Minus
Query: 102 accgacgcggagctgctccaggcgcagtccgacctgtggcgccacagcctctgctacctc 161
||||||| |||||||| || |||||| |||||||||||||||||||||||| || | ||
Sbjct: 11331664 accgacgacgagctgctgcacgcgcaggccgacctgtggcgccacagcctctacttcgtc 11331605
Query: 162 acgcccatgtcgctccgctgcgccgtcgacctcggcgtccccacggccatccaccgcctc 221
||| ||||| || ||| ||||||||| | |||||| ||||||| ||||||||||||
Sbjct: 11331604 acgtccatggcgttccagtgcgccgtcaagctcggcatccccaccgccatccaccgcgct 11331545
Query: 222 ggcggcgccgcgtccccgtccgaactggtcgccgccctgtccct 265
|| ||| |||| || | | |||| || |||||||||||||||||
Sbjct: 11331544 ggtggcaccgcctcgctgcccgaccttgtcgccgccctgtccct 11331501
Score = 101 bits (51), Expect = 3e-18
Identities = 90/103 (87%)
Strand = Plus / Minus
Query: 130 ccgacctgtggcgccacagcctctgctacctcacgcccatgtcgctccgctgcgccgtcg 189
|||||||||||||||||||||||| |||||||||| ||||| ||||||||||||||||
Sbjct: 11550532 ccgacctgtggcgccacagcctctactacctcacgtccatgggcctccgctgcgccgtcg 11550473
Query: 190 acctcggcgtccccacggccatccaccgcctcggcggcgccgc 232
| |||||| |||| || | ||||| ||||||||||||||||
Sbjct: 11550472 agctcggcatcccgaccacgatccatggcctcggcggcgccgc 11550430
Score = 89.7 bits (45), Expect = 1e-14
Identities = 153/189 (80%)
Strand = Plus / Minus
Query: 102 accgacgcggagctgctccaggcgcagtccgacctgtggcgccacagcctctgctacctc 161
||||||| |||||||| || |||||| ||||| ||| |||||||||||||| || | ||
Sbjct: 11355312 accgacgacgagctgctgcacgcgcaggccgacatgttgcgccacagcctctacttcgtc 11355253
Query: 162 acgcccatgtcgctccgctgcgccgtcgacctcggcgtccccacggccatccaccgcctc 221
||| ||||| || | | ||||||||| | |||||| ||||||| |||||||||||| |
Sbjct: 11355252 acgtccatggcgtttcagtgcgccgtcaagctcggcatccccaccgccatccaccgcgcc 11355193
Query: 222 ggcggcgccgcgtccccgtccgaactggtcgccgccctgtccctgcccgcgtccaagctg 281
|||||| |||| || | | |||| || ||||||||||| ||||| || | |||||||
Sbjct: 11355192 ggcggcaccgcctcgctgcccgaccttgtcgccgccctctccctcccgcccgccaagctc 11355133
Query: 282 ccgttcctc 290
|||||||||
Sbjct: 11355132 ccgttcctc 11355124
Score = 71.9 bits (36), Expect = 2e-09
Identities = 78/92 (84%)
Strand = Plus / Minus
Query: 199 tccccacggccatccaccgcctcggcggcgccgcgtccccgtccgaactggtcgccgccc 258
||||||| |||||||||||| ||||||||||||||| | | |||| ||||| |||| |
Sbjct: 11439513 tccccaccgccatccaccgcgccggcggcgccgcgtcgctgcccgacctggttaccgctc 11439454
Query: 259 tgtccctgcccgcgtccaagctgccgttcctc 290
||||||| || |||||||||| |||||||||
Sbjct: 11439453 tgtccctcccgccgtccaagctaccgttcctc 11439422
Score = 67.9 bits (34), Expect = 4e-08
Identities = 108/130 (83%), Gaps = 2/130 (1%)
Strand = Plus / Minus
Query: 410 cagccagacggccatcgtgcgcgccgcggcctcgcgccactacgtggaggcggccatggg 469
|||||||||| || |||||| ||||||| | ||||| |||||| | |||||||| ||||
Sbjct: 11494544 cagccagacgtccttcgtgctcgccgcgacgtcgcggcactacctcgaggcggcgctggg 11494485
Query: 470 cctggccgactggttcaggaaggacttcgacggggccg-tgccctcgccgttcgaggacg 528
|||| ||| ||||||||||||||| | | || |||| | || || |||||||||||||
Sbjct: 11494484 gctggacgagtggttcaggaaggacgt-ggcgccgccgctcccgtccccgttcgaggacg 11494426
Query: 529 tgcacggcgc 538
||||||||||
Sbjct: 11494425 tgcacggcgc 11494416
Score = 63.9 bits (32), Expect = 6e-07
Identities = 56/64 (87%)
Strand = Plus / Minus
Query: 513 tcgccgttcgaggacgtgcacggcgccgccatcttcgaggagagcatggcgctcctcgac 572
|||||||||||||| |||||||||||||| | ||||| |||||||||||| ||| |||
Sbjct: 11354862 tcgccgttcgaggaggtgcacggcgccgcgctgttcgacgagagcatggcgaaccttgac 11354803
Query: 573 ccgg 576
||||
Sbjct: 11354802 ccgg 11354799
Score = 54.0 bits (27), Expect = 6e-04
Identities = 48/55 (87%)
Strand = Plus / Minus
Query: 110 ggagctgctccaggcgcagtccgacctgtggcgccacagcctctgctacctcacg 164
||||||||| || || ||| |||| || ||||||||||||||||||||| |||||
Sbjct: 11439602 ggagctgctgcaagcacaggccgatctatggcgccacagcctctgctacatcacg 11439548
Score = 48.1 bits (24), Expect = 0.034
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 507 gtgccctcgccgttcgaggacgtgcacggcgc 538
||||| ||||||||||||||| ||||||||||
Sbjct: 11550146 gtgccgtcgccgttcgaggacctgcacggcgc 11550115
Score = 48.1 bits (24), Expect = 0.034
Identities = 42/48 (87%)
Strand = Plus / Plus
Query: 447 cactacgtggaggcggccatgggcctggccgactggttcaggaaggac 494
||||||||||||||||| | || |||| ||||||||||| |||||||
Sbjct: 11482654 cactacgtggaggcggcgctcgggctggacgactggttcatgaaggac 11482701
Score = 48.1 bits (24), Expect = 0.034
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 447 cactacgtggaggcggccatgggcctggccgactggttcaggaaggac 494
|||| |||||||||||| ||||| || || ||||||||| ||||||||
Sbjct: 11354937 cacttcgtggaggcggcgatggggctcgcggactggttcgggaaggac 11354890
Score = 48.1 bits (24), Expect = 0.034
Identities = 54/64 (84%)
Strand = Plus / Minus
Query: 513 tcgccgttcgaggacgtgcacggcgccgccatcttcgaggagagcatggcgctcctcgac 572
|||||||||||||| ||||||||||| | | ||||| |||||||||||| |||| ||
Sbjct: 11331223 tcgccgttcgaggaggtgcacggcgcggtgctgttcgacgagagcatggcgagcctccac 11331164
Query: 573 ccgg 576
||||
Sbjct: 11331163 ccgg 11331160
Score = 48.1 bits (24), Expect = 0.034
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 507 gtgccctcgccgttcgaggacgtgcacggcgc 538
||||| |||||||||||||||| |||||||||
Sbjct: 7138569 gtgccgtcgccgttcgaggacgcgcacggcgc 7138538
Score = 46.1 bits (23), Expect = 0.14
Identities = 65/79 (82%)
Strand = Plus / Minus
Query: 154 gctacctcacgcccatgtcgctccgctgcgccgtcgacctcggcgtccccacggccatcc 213
||||| ||| ||||||| ||||| |||||||| || |||||| ||||| || ||||
Sbjct: 19031109 gctacatcaagcccatggcgctcaagtgcgccgtggagctcggcatccccgacgcgatcc 19031050
Query: 214 accgcctcggcggcgccgc 232
|||||| ||||||||||||
Sbjct: 19031049 accgccgcggcggcgccgc 19031031
Score = 42.1 bits (21), Expect = 2.1
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 325 tcttcacctccaccgacgccg 345
|||||||||||||||||||||
Sbjct: 25593958 tcttcacctccaccgacgccg 25593978
Score = 42.1 bits (21), Expect = 2.1
Identities = 48/57 (84%)
Strand = Plus / Minus
Query: 334 ccaccgacgccggaacgtaccgcctcaaccctctctcgtacctcctcgtggacggcg 390
||||||| ||||||||||||| |||| ||| || || | |||||| ||||||||||
Sbjct: 11439369 ccaccgataccggaacgtaccgtctcaccccgctgtcatgcctcctggtggacggcg 11439313
Score = 40.1 bits (20), Expect = 8.3
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 587 gctcatccacgacgccgtcg 606
||||||||||||||||||||
Sbjct: 21883010 gctcatccacgacgccgtcg 21883029
Score = 40.1 bits (20), Expect = 8.3
Identities = 41/48 (85%)
Strand = Plus / Minus
Query: 447 cactacgtggaggcggccatgggcctggccgactggttcaggaaggac 494
|||| ||| |||||||| ||||| || || || |||||||||||||||
Sbjct: 11331292 cacttcgtcgaggcggcgatggggctcgcggagtggttcaggaaggac 11331245
>gb|DP000010.1 | Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
Length = 28369397
Score = 139 bits (70), Expect = 1e-29
Identities = 115/130 (88%)
Strand = Plus / Minus
Query: 99 cccaccgacgcggagctgctccaggcgcagtccgacctgtggcgccacagcctctgctac 158
||||||||||| |||||||| || || ||| ||||||| |||||||||||| ||| ||||
Sbjct: 7204984 cccaccgacgctgagctgctgcaagcacaggccgacctatggcgccacagcttctcctac 7204925
Query: 159 ctcacgcccatgtcgctccgctgcgccgtcgacctcggcgtccccacggccatccaccgc 218
|||||| ||||| ||||||||||||||| | | |||||| ||||||| ||||||||||||
Sbjct: 7204924 ctcacggccatggcgctccgctgcgccgccaagctcggcatccccaccgccatccaccgc 7204865
Query: 219 ctcggcggcg 228
||||||||||
Sbjct: 7204864 ctcggcggcg 7204855
Score = 127 bits (64), Expect = 5e-26
Identities = 166/200 (83%)
Strand = Plus / Minus
Query: 91 tgttcgtccccaccgacgcggagctgctccaggcgcagtccgacctgtggcgccacagcc 150
|||| ||||| ||||||| ||| |||| || ||||| |||| ||||||||||||| ||
Sbjct: 11382256 tgttggtcccgaccgacgacgagatgctgcaaacgcaggccgagctgtggcgccacaccc 11382197
Query: 151 tctgctacctcacgcccatgtcgctccgctgcgccgtcgacctcggcgtccccacggcca 210
||| ||||||||| ||||| | ||||| ||||||||| |||||||| ||||||| ||||
Sbjct: 11382196 tctcctacctcacctccatgactctccggtgcgccgtccacctcggcatccccaccgcca 11382137
Query: 211 tccaccgcctcggcggcgccgcgtccccgtccgaactggtcgccgccctgtccctgcccg 270
||||||||| |||||||||||| || | | |||| || ||| |||| |||||||| |||
Sbjct: 11382136 tccaccgccacggcggcgccgcctcgctgcccgacctcgtcaccgcgctgtccctcccca 11382077
Query: 271 cgtccaagctgccgttcctc 290
|| ||||||| || ||||||
Sbjct: 11382076 cggccaagctccccttcctc 11382057
Score = 123 bits (62), Expect = 7e-25
Identities = 119/138 (86%)
Strand = Plus / Minus
Query: 99 cccaccgacgcggagctgctccaggcgcagtccgacctgtggcgccacagcctctgctac 158
||||| ||||| |||||||| || |||||| |||| ||||||||||||||||||| ||||
Sbjct: 11574056 cccactgacgctgagctgctgcaagcgcaggccgatctgtggcgccacagcctctactac 11573997
Query: 159 ctcacgcccatgtcgctccgctgcgccgtcgacctcggcgtccccacggccatccaccgc 218
||||| ||| | |||||||||||| || | || ||| ||||||| ||||||||||||
Sbjct: 11573996 ctcacctccacgggactccgctgcgccatcaagctgggcatccccaccgccatccaccgc 11573937
Query: 219 ctcggcggcgccgcgtcc 236
||||||||||||||||||
Sbjct: 11573936 ctcggcggcgccgcgtcc 11573919
Score = 119 bits (60), Expect = 1e-23
Identities = 96/108 (88%)
Strand = Plus / Plus
Query: 120 caggcgcagtccgacctgtggcgccacagcctctgctacctcacgcccatgtcgctccgc 179
||||||||| || ||||||||||||||||||||| ||||||||| ||||| |||||||
Sbjct: 11561480 caggcgcaggccaacctgtggcgccacagcctctactacctcacctccatggcgctccgg 11561539
Query: 180 tgcgccgtcgacctcggcgtccccacggccatccaccgcctcggcggc 227
||||||||| | |||||| ||||||| | |||||||||||||||||||
Sbjct: 11561540 tgcgccgtcaagctcggcatccccacagtcatccaccgcctcggcggc 11561587
Score = 103 bits (52), Expect = 7e-19
Identities = 136/164 (82%)
Strand = Plus / Minus
Query: 102 accgacgcggagctgctccaggcgcagtccgacctgtggcgccacagcctctgctacctc 161
||||||| |||||||| || |||||| |||||||||||||||||||||||| || | ||
Sbjct: 11410853 accgacgacgagctgctgcacgcgcaggccgacctgtggcgccacagcctctacttcgtc 11410794
Query: 162 acgcccatgtcgctccgctgcgccgtcgacctcggcgtccccacggccatccaccgcctc 221
||| ||||| || ||| ||||||||| | |||||| ||||||| ||||||||||||
Sbjct: 11410793 acgtccatggcgttccagtgcgccgtcaagctcggcatccccaccgccatccaccgcgct 11410734
Query: 222 ggcggcgccgcgtccccgtccgaactggtcgccgccctgtccct 265
|| ||| |||| || | | |||| || |||||||||||||||||
Sbjct: 11410733 ggtggcaccgcctcgctgcccgaccttgtcgccgccctgtccct 11410690
Score = 101 bits (51), Expect = 3e-18
Identities = 90/103 (87%)
Strand = Plus / Minus
Query: 130 ccgacctgtggcgccacagcctctgctacctcacgcccatgtcgctccgctgcgccgtcg 189
|||||||||||||||||||||||| |||||||||| ||||| ||||||||||||||||
Sbjct: 11629721 ccgacctgtggcgccacagcctctactacctcacgtccatgggcctccgctgcgccgtcg 11629662
Query: 190 acctcggcgtccccacggccatccaccgcctcggcggcgccgc 232
| |||||| |||| || | ||||| ||||||||||||||||
Sbjct: 11629661 agctcggcatcccgaccacgatccatggcctcggcggcgccgc 11629619
Score = 89.7 bits (45), Expect = 1e-14
Identities = 153/189 (80%)
Strand = Plus / Minus
Query: 102 accgacgcggagctgctccaggcgcagtccgacctgtggcgccacagcctctgctacctc 161
||||||| |||||||| || |||||| ||||| ||| |||||||||||||| || | ||
Sbjct: 11434501 accgacgacgagctgctgcacgcgcaggccgacatgttgcgccacagcctctacttcgtc 11434442
Query: 162 acgcccatgtcgctccgctgcgccgtcgacctcggcgtccccacggccatccaccgcctc 221
||| ||||| || | | ||||||||| | |||||| ||||||| |||||||||||| |
Sbjct: 11434441 acgtccatggcgtttcagtgcgccgtcaagctcggcatccccaccgccatccaccgcgcc 11434382
Query: 222 ggcggcgccgcgtccccgtccgaactggtcgccgccctgtccctgcccgcgtccaagctg 281
|||||| |||| || | | |||| || ||||||||||| ||||| || | |||||||
Sbjct: 11434381 ggcggcaccgcctcgctgcccgaccttgtcgccgccctctccctcccgcccgccaagctc 11434322
Query: 282 ccgttcctc 290
|||||||||
Sbjct: 11434321 ccgttcctc 11434313
Score = 71.9 bits (36), Expect = 2e-09
Identities = 78/92 (84%)
Strand = Plus / Minus
Query: 199 tccccacggccatccaccgcctcggcggcgccgcgtccccgtccgaactggtcgccgccc 258
||||||| |||||||||||| ||||||||||||||| | | |||| ||||| |||| |
Sbjct: 11518702 tccccaccgccatccaccgcgccggcggcgccgcgtcgctgcccgacctggttaccgctc 11518643
Query: 259 tgtccctgcccgcgtccaagctgccgttcctc 290
||||||| || |||||||||| |||||||||
Sbjct: 11518642 tgtccctcccgccgtccaagctaccgttcctc 11518611
Score = 67.9 bits (34), Expect = 4e-08
Identities = 108/130 (83%), Gaps = 2/130 (1%)
Strand = Plus / Minus
Query: 410 cagccagacggccatcgtgcgcgccgcggcctcgcgccactacgtggaggcggccatggg 469
|||||||||| || |||||| ||||||| | ||||| |||||| | |||||||| ||||
Sbjct: 11573733 cagccagacgtccttcgtgctcgccgcgacgtcgcggcactacctcgaggcggcgctggg 11573674
Query: 470 cctggccgactggttcaggaaggacttcgacggggccg-tgccctcgccgttcgaggacg 528
|||| ||| ||||||||||||||| | | || |||| | || || |||||||||||||
Sbjct: 11573673 gctggacgagtggttcaggaaggacgt-ggcgccgccgctcccgtccccgttcgaggacg 11573615
Query: 529 tgcacggcgc 538
||||||||||
Sbjct: 11573614 tgcacggcgc 11573605
Score = 63.9 bits (32), Expect = 6e-07
Identities = 56/64 (87%)
Strand = Plus / Minus
Query: 513 tcgccgttcgaggacgtgcacggcgccgccatcttcgaggagagcatggcgctcctcgac 572
|||||||||||||| |||||||||||||| | ||||| |||||||||||| ||| |||
Sbjct: 11434051 tcgccgttcgaggaggtgcacggcgccgcgctgttcgacgagagcatggcgaaccttgac 11433992
Query: 573 ccgg 576
||||
Sbjct: 11433991 ccgg 11433988
Score = 54.0 bits (27), Expect = 6e-04
Identities = 48/55 (87%)
Strand = Plus / Minus
Query: 110 ggagctgctccaggcgcagtccgacctgtggcgccacagcctctgctacctcacg 164
||||||||| || || ||| |||| || ||||||||||||||||||||| |||||
Sbjct: 11518791 ggagctgctgcaagcacaggccgatctatggcgccacagcctctgctacatcacg 11518737
Score = 48.1 bits (24), Expect = 0.034
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 507 gtgccctcgccgttcgaggacgtgcacggcgc 538
||||| ||||||||||||||| ||||||||||
Sbjct: 11629335 gtgccgtcgccgttcgaggacctgcacggcgc 11629304
Score = 48.1 bits (24), Expect = 0.034
Identities = 42/48 (87%)
Strand = Plus / Plus
Query: 447 cactacgtggaggcggccatgggcctggccgactggttcaggaaggac 494
||||||||||||||||| | || |||| ||||||||||| |||||||
Sbjct: 11561843 cactacgtggaggcggcgctcgggctggacgactggttcatgaaggac 11561890
Score = 48.1 bits (24), Expect = 0.034
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 447 cactacgtggaggcggccatgggcctggccgactggttcaggaaggac 494
|||| |||||||||||| ||||| || || ||||||||| ||||||||
Sbjct: 11434126 cacttcgtggaggcggcgatggggctcgcggactggttcgggaaggac 11434079
Score = 48.1 bits (24), Expect = 0.034
Identities = 54/64 (84%)
Strand = Plus / Minus
Query: 513 tcgccgttcgaggacgtgcacggcgccgccatcttcgaggagagcatggcgctcctcgac 572
|||||||||||||| ||||||||||| | | ||||| |||||||||||| |||| ||
Sbjct: 11410412 tcgccgttcgaggaggtgcacggcgcggtgctgttcgacgagagcatggcgagcctccac 11410353
Query: 573 ccgg 576
||||
Sbjct: 11410352 ccgg 11410349
Score = 48.1 bits (24), Expect = 0.034
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 507 gtgccctcgccgttcgaggacgtgcacggcgc 538
||||| |||||||||||||||| |||||||||
Sbjct: 7204540 gtgccgtcgccgttcgaggacgcgcacggcgc 7204509
Score = 46.1 bits (23), Expect = 0.14
Identities = 65/79 (82%)
Strand = Plus / Minus
Query: 154 gctacctcacgcccatgtcgctccgctgcgccgtcgacctcggcgtccccacggccatcc 213
||||| ||| ||||||| ||||| |||||||| || |||||| ||||| || ||||
Sbjct: 19189758 gctacatcaagcccatggcgctcaagtgcgccgtggagctcggcatccccgacgcgatcc 19189699
Query: 214 accgcctcggcggcgccgc 232
|||||| ||||||||||||
Sbjct: 19189698 accgccgcggcggcgccgc 19189680
Score = 42.1 bits (21), Expect = 2.1
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 325 tcttcacctccaccgacgccg 345
|||||||||||||||||||||
Sbjct: 25912628 tcttcacctccaccgacgccg 25912648
Score = 42.1 bits (21), Expect = 2.1
Identities = 48/57 (84%)
Strand = Plus / Minus
Query: 334 ccaccgacgccggaacgtaccgcctcaaccctctctcgtacctcctcgtggacggcg 390
||||||| ||||||||||||| |||| ||| || || | |||||| ||||||||||
Sbjct: 11518558 ccaccgataccggaacgtaccgtctcaccccgctgtcatgcctcctggtggacggcg 11518502
Score = 40.1 bits (20), Expect = 8.3
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 587 gctcatccacgacgccgtcg 606
||||||||||||||||||||
Sbjct: 22193209 gctcatccacgacgccgtcg 22193228
Score = 40.1 bits (20), Expect = 8.3
Identities = 41/48 (85%)
Strand = Plus / Minus
Query: 447 cactacgtggaggcggccatgggcctggccgactggttcaggaaggac 494
|||| ||| |||||||| ||||| || || || |||||||||||||||
Sbjct: 11410481 cacttcgtcgaggcggcgatggggctcgcggagtggttcaggaaggac 11410434
>gb|AC112208.3 | Oryza sativa (japonica cultivar-group) chromosome 11 clone
OSJNBa0015P05 map C53961S, complete sequence
Length = 175121
Score = 127 bits (64), Expect = 5e-26
Identities = 166/200 (83%)
Strand = Plus / Minus
Query: 91 tgttcgtccccaccgacgcggagctgctccaggcgcagtccgacctgtggcgccacagcc 150
|||| ||||| ||||||| ||| |||| || ||||| |||| ||||||||||||| ||
Sbjct: 89425 tgttggtcccgaccgacgacgagatgctgcaaacgcaggccgagctgtggcgccacaccc 89366
Query: 151 tctgctacctcacgcccatgtcgctccgctgcgccgtcgacctcggcgtccccacggcca 210
||| ||||||||| ||||| | ||||| ||||||||| |||||||| ||||||| ||||
Sbjct: 89365 tctcctacctcacctccatgactctccggtgcgccgtccacctcggcatccccaccgcca 89306
Query: 211 tccaccgcctcggcggcgccgcgtccccgtccgaactggtcgccgccctgtccctgcccg 270
||||||||| |||||||||||| || | | |||| || ||| |||| |||||||| |||
Sbjct: 89305 tccaccgccacggcggcgccgcctcgctgcccgacctcgtcaccgcgctgtccctcccca 89246
Query: 271 cgtccaagctgccgttcctc 290
|| ||||||| || ||||||
Sbjct: 89245 cggccaagctccccttcctc 89226
Score = 103 bits (52), Expect = 7e-19
Identities = 136/164 (82%)
Strand = Plus / Minus
Query: 102 accgacgcggagctgctccaggcgcagtccgacctgtggcgccacagcctctgctacctc 161
||||||| |||||||| || |||||| |||||||||||||||||||||||| || | ||
Sbjct: 118022 accgacgacgagctgctgcacgcgcaggccgacctgtggcgccacagcctctacttcgtc 117963
Query: 162 acgcccatgtcgctccgctgcgccgtcgacctcggcgtccccacggccatccaccgcctc 221
||| ||||| || ||| ||||||||| | |||||| ||||||| ||||||||||||
Sbjct: 117962 acgtccatggcgttccagtgcgccgtcaagctcggcatccccaccgccatccaccgcgct 117903
Query: 222 ggcggcgccgcgtccccgtccgaactggtcgccgccctgtccct 265
|| ||| |||| || | | |||| || |||||||||||||||||
Sbjct: 117902 ggtggcaccgcctcgctgcccgaccttgtcgccgccctgtccct 117859
Score = 89.7 bits (45), Expect = 1e-14
Identities = 153/189 (80%)
Strand = Plus / Minus
Query: 102 accgacgcggagctgctccaggcgcagtccgacctgtggcgccacagcctctgctacctc 161
||||||| |||||||| || |||||| ||||| ||| |||||||||||||| || | ||
Sbjct: 141670 accgacgacgagctgctgcacgcgcaggccgacatgttgcgccacagcctctacttcgtc 141611
Query: 162 acgcccatgtcgctccgctgcgccgtcgacctcggcgtccccacggccatccaccgcctc 221
||| ||||| || | | ||||||||| | |||||| ||||||| |||||||||||| |
Sbjct: 141610 acgtccatggcgtttcagtgcgccgtcaagctcggcatccccaccgccatccaccgcgcc 141551
Query: 222 ggcggcgccgcgtccccgtccgaactggtcgccgccctgtccctgcccgcgtccaagctg 281
|||||| |||| || | | |||| || ||||||||||| ||||| || | |||||||
Sbjct: 141550 ggcggcaccgcctcgctgcccgaccttgtcgccgccctctccctcccgcccgccaagctc 141491
Query: 282 ccgttcctc 290
|||||||||
Sbjct: 141490 ccgttcctc 141482
Score = 63.9 bits (32), Expect = 6e-07
Identities = 56/64 (87%)
Strand = Plus / Minus
Query: 513 tcgccgttcgaggacgtgcacggcgccgccatcttcgaggagagcatggcgctcctcgac 572
|||||||||||||| |||||||||||||| | ||||| |||||||||||| ||| |||
Sbjct: 141220 tcgccgttcgaggaggtgcacggcgccgcgctgttcgacgagagcatggcgaaccttgac 141161
Query: 573 ccgg 576
||||
Sbjct: 141160 ccgg 141157
Score = 48.1 bits (24), Expect = 0.034
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 447 cactacgtggaggcggccatgggcctggccgactggttcaggaaggac 494
|||| |||||||||||| ||||| || || ||||||||| ||||||||
Sbjct: 141295 cacttcgtggaggcggcgatggggctcgcggactggttcgggaaggac 141248
Score = 48.1 bits (24), Expect = 0.034
Identities = 54/64 (84%)
Strand = Plus / Minus
Query: 513 tcgccgttcgaggacgtgcacggcgccgccatcttcgaggagagcatggcgctcctcgac 572
|||||||||||||| ||||||||||| | | ||||| |||||||||||| |||| ||
Sbjct: 117581 tcgccgttcgaggaggtgcacggcgcggtgctgttcgacgagagcatggcgagcctccac 117522
Query: 573 ccgg 576
||||
Sbjct: 117521 ccgg 117518
Score = 40.1 bits (20), Expect = 8.3
Identities = 41/48 (85%)
Strand = Plus / Minus
Query: 447 cactacgtggaggcggccatgggcctggccgactggttcaggaaggac 494
|||| ||| |||||||| ||||| || || || |||||||||||||||
Sbjct: 117650 cacttcgtcgaggcggcgatggggctcgcggagtggttcaggaaggac 117603
>gb|AC138195.2 | Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0005P21,
complete sequence
Length = 147381
Score = 123 bits (62), Expect = 7e-25
Identities = 119/138 (86%)
Strand = Plus / Plus
Query: 99 cccaccgacgcggagctgctccaggcgcagtccgacctgtggcgccacagcctctgctac 158
||||| ||||| |||||||| || |||||| |||| ||||||||||||||||||| ||||
Sbjct: 118921 cccactgacgctgagctgctgcaagcgcaggccgatctgtggcgccacagcctctactac 118980
Query: 159 ctcacgcccatgtcgctccgctgcgccgtcgacctcggcgtccccacggccatccaccgc 218
||||| ||| | |||||||||||| || | || ||| ||||||| ||||||||||||
Sbjct: 118981 ctcacctccacgggactccgctgcgccatcaagctgggcatccccaccgccatccaccgc 119040
Query: 219 ctcggcggcgccgcgtcc 236
||||||||||||||||||
Sbjct: 119041 ctcggcggcgccgcgtcc 119058
Score = 119 bits (60), Expect = 1e-23
Identities = 96/108 (88%)
Strand = Plus / Minus
Query: 120 caggcgcagtccgacctgtggcgccacagcctctgctacctcacgcccatgtcgctccgc 179
||||||||| || ||||||||||||||||||||| ||||||||| ||||| |||||||
Sbjct: 131497 caggcgcaggccaacctgtggcgccacagcctctactacctcacctccatggcgctccgg 131438
Query: 180 tgcgccgtcgacctcggcgtccccacggccatccaccgcctcggcggc 227
||||||||| | |||||| ||||||| | |||||||||||||||||||
Sbjct: 131437 tgcgccgtcaagctcggcatccccacagtcatccaccgcctcggcggc 131390
Score = 101 bits (51), Expect = 3e-18
Identities = 90/103 (87%)
Strand = Plus / Plus
Query: 130 ccgacctgtggcgccacagcctctgctacctcacgcccatgtcgctccgctgcgccgtcg 189
|||||||||||||||||||||||| |||||||||| ||||| ||||||||||||||||
Sbjct: 63256 ccgacctgtggcgccacagcctctactacctcacgtccatgggcctccgctgcgccgtcg 63315
Query: 190 acctcggcgtccccacggccatccaccgcctcggcggcgccgc 232
| |||||| |||| || | ||||| ||||||||||||||||
Sbjct: 63316 agctcggcatcccgaccacgatccatggcctcggcggcgccgc 63358
Score = 67.9 bits (34), Expect = 4e-08
Identities = 108/130 (83%), Gaps = 2/130 (1%)
Strand = Plus / Plus
Query: 410 cagccagacggccatcgtgcgcgccgcggcctcgcgccactacgtggaggcggccatggg 469
|||||||||| || |||||| ||||||| | ||||| |||||| | |||||||| ||||
Sbjct: 119244 cagccagacgtccttcgtgctcgccgcgacgtcgcggcactacctcgaggcggcgctggg 119303
Query: 470 cctggccgactggttcaggaaggacttcgacggggccg-tgccctcgccgttcgaggacg 528
|||| ||| ||||||||||||||| | | || |||| | || || |||||||||||||
Sbjct: 119304 gctggacgagtggttcaggaaggacgt-ggcgccgccgctcccgtccccgttcgaggacg 119362
Query: 529 tgcacggcgc 538
||||||||||
Sbjct: 119363 tgcacggcgc 119372
Score = 48.1 bits (24), Expect = 0.034
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 447 cactacgtggaggcggccatgggcctggccgactggttcaggaaggac 494
||||||||||||||||| | || |||| ||||||||||| |||||||
Sbjct: 131134 cactacgtggaggcggcgctcgggctggacgactggttcatgaaggac 131087
Score = 48.1 bits (24), Expect = 0.034
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 507 gtgccctcgccgttcgaggacgtgcacggcgc 538
||||| ||||||||||||||| ||||||||||
Sbjct: 63642 gtgccgtcgccgttcgaggacctgcacggcgc 63673
>gb|AC135793.4 | Oryza sativa chromosome 11 BAC clone OSJNBb0017P15, complete sequence
Length = 128418
Score = 123 bits (62), Expect = 7e-25
Identities = 119/138 (86%)
Strand = Plus / Plus
Query: 99 cccaccgacgcggagctgctccaggcgcagtccgacctgtggcgccacagcctctgctac 158
||||| ||||| |||||||| || |||||| |||| ||||||||||||||||||| ||||
Sbjct: 4670 cccactgacgctgagctgctgcaagcgcaggccgatctgtggcgccacagcctctactac 4729
Query: 159 ctcacgcccatgtcgctccgctgcgccgtcgacctcggcgtccccacggccatccaccgc 218
||||| ||| | |||||||||||| || | || ||| ||||||| ||||||||||||
Sbjct: 4730 ctcacctccacgggactccgctgcgccatcaagctgggcatccccaccgccatccaccgc 4789
Query: 219 ctcggcggcgccgcgtcc 236
||||||||||||||||||
Sbjct: 4790 ctcggcggcgccgcgtcc 4807
Score = 119 bits (60), Expect = 1e-23
Identities = 96/108 (88%)
Strand = Plus / Minus
Query: 120 caggcgcagtccgacctgtggcgccacagcctctgctacctcacgcccatgtcgctccgc 179
||||||||| || ||||||||||||||||||||| ||||||||| ||||| |||||||
Sbjct: 17246 caggcgcaggccaacctgtggcgccacagcctctactacctcacctccatggcgctccgg 17187
Query: 180 tgcgccgtcgacctcggcgtccccacggccatccaccgcctcggcggc 227
||||||||| | |||||| ||||||| | |||||||||||||||||||
Sbjct: 17186 tgcgccgtcaagctcggcatccccacagtcatccaccgcctcggcggc 17139
Score = 71.9 bits (36), Expect = 2e-09
Identities = 78/92 (84%)
Strand = Plus / Plus
Query: 199 tccccacggccatccaccgcctcggcggcgccgcgtccccgtccgaactggtcgccgccc 258
||||||| |||||||||||| ||||||||||||||| | | |||| ||||| |||| |
Sbjct: 60024 tccccaccgccatccaccgcgccggcggcgccgcgtcgctgcccgacctggttaccgctc 60083
Query: 259 tgtccctgcccgcgtccaagctgccgttcctc 290
||||||| || |||||||||| |||||||||
Sbjct: 60084 tgtccctcccgccgtccaagctaccgttcctc 60115
Score = 67.9 bits (34), Expect = 4e-08
Identities = 108/130 (83%), Gaps = 2/130 (1%)
Strand = Plus / Plus
Query: 410 cagccagacggccatcgtgcgcgccgcggcctcgcgccactacgtggaggcggccatggg 469
|||||||||| || |||||| ||||||| | ||||| |||||| | |||||||| ||||
Sbjct: 4993 cagccagacgtccttcgtgctcgccgcgacgtcgcggcactacctcgaggcggcgctggg 5052
Query: 470 cctggccgactggttcaggaaggacttcgacggggccg-tgccctcgccgttcgaggacg 528
|||| ||| ||||||||||||||| | | || |||| | || || |||||||||||||
Sbjct: 5053 gctggacgagtggttcaggaaggacgt-ggcgccgccgctcccgtccccgttcgaggacg 5111
Query: 529 tgcacggcgc 538
||||||||||
Sbjct: 5112 tgcacggcgc 5121
Score = 54.0 bits (27), Expect = 6e-04
Identities = 48/55 (87%)
Strand = Plus / Plus
Query: 110 ggagctgctccaggcgcagtccgacctgtggcgccacagcctctgctacctcacg 164
||||||||| || || ||| |||| || ||||||||||||||||||||| |||||
Sbjct: 59935 ggagctgctgcaagcacaggccgatctatggcgccacagcctctgctacatcacg 59989
Score = 48.1 bits (24), Expect = 0.034
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 447 cactacgtggaggcggccatgggcctggccgactggttcaggaaggac 494
||||||||||||||||| | || |||| ||||||||||| |||||||
Sbjct: 16883 cactacgtggaggcggcgctcgggctggacgactggttcatgaaggac 16836
Score = 42.1 bits (21), Expect = 2.1
Identities = 48/57 (84%)
Strand = Plus / Plus
Query: 334 ccaccgacgccggaacgtaccgcctcaaccctctctcgtacctcctcgtggacggcg 390
||||||| ||||||||||||| |||| ||| || || | |||||| ||||||||||
Sbjct: 60168 ccaccgataccggaacgtaccgtctcaccccgctgtcatgcctcctggtggacggcg 60224
>dbj|AP008212.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
sequence
Length = 30731886
Score = 58.0 bits (29), Expect = 4e-05
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 180 tgcgccgtcgacctcggcgtccccacggccatccaccgcctcggcggcgccgc 232
||||||| ||| |||||| ||||| | ||||||||||||| ||||||||||||
Sbjct: 9845396 tgcgccgccgagctcggcatccccgccgccatccaccgccgcggcggcgccgc 9845344
Score = 54.0 bits (27), Expect = 6e-04
Identities = 51/59 (86%)
Strand = Plus / Minus
Query: 174 ctccgctgcgccgtcgacctcggcgtccccacggccatccaccgcctcggcggcgccgc 232
||||| ||||||| ||| ||||||||||||| ||||||||||||| || ||||||||
Sbjct: 7318265 ctccggtgcgccgccgatctcggcgtccccagcgccatccaccgccggggaggcgccgc 7318207
Score = 44.1 bits (22), Expect = 0.53
Identities = 29/30 (96%), Gaps = 1/30 (3%)
Strand = Plus / Minus
Query: 207 gccatccaccgcctcggcg-gcgccgcgtc 235
||||||||||||||||||| ||||||||||
Sbjct: 25487667 gccatccaccgcctcggcgcgcgccgcgtc 25487638
>gb|AY957390.1 | Pseudomonas stutzeri NosL (nosL), NosY (nosY), and NosF (nosF) genes,
complete cds; NosD-like (nosD) gene, complete sequence;
and NosZ (nosZ) and NosR (nosR) genes, complete cds
Length = 8000
Score = 44.1 bits (22), Expect = 0.53
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 392 ccgcatcgacggcgacgccagc 413
||||||||||||||||||||||
Sbjct: 3231 ccgcatcgacggcgacgccagc 3210
>dbj|AP001816.2 | Homo sapiens genomic DNA, chromosome 4q22-q24, clone:563D14, complete
sequence
Length = 123323
Score = 40.1 bits (20), Expect = 8.3
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 284 gttcctcgcccgcctgctgcgcca 307
|||||| |||||||||||||||||
Sbjct: 111070 gttcctggcccgcctgctgcgcca 111093
Database: nt
Posted date: May 29, 2006 11:10 AM
Number of letters in database: 3,984,495,279
Number of sequences in database: 917,343
Database: /shigen/export/home/twatanab/db/nt/nt.01
Posted date: May 29, 2006 11:16 AM
Number of letters in database: 3,988,174,986
Number of sequences in database: 835,257
Database: /shigen/export/home/twatanab/db/nt/nt.02
Posted date: May 29, 2006 11:21 AM
Number of letters in database: 3,991,246,324
Number of sequences in database: 771,481
Database: /shigen/export/home/twatanab/db/nt/nt.03
Posted date: May 29, 2006 11:27 AM
Number of letters in database: 3,990,718,311
Number of sequences in database: 977,174
Database: /shigen/export/home/twatanab/db/nt/nt.04
Posted date: May 29, 2006 11:29 AM
Number of letters in database: 1,278,410,368
Number of sequences in database: 400,813
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,246,376
Number of Sequences: 3902068
Number of extensions: 3246376
Number of successful extensions: 81575
Number of sequences better than 10.0: 111
Number of HSP's better than 10.0 without gapping: 120
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 75391
Number of HSP's gapped (non-prelim): 6175
length of query: 613
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 590
effective length of database: 17,143,297,704
effective search space: 10114545645360
effective search space used: 10114545645360
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)