ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart44h02 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC135258.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0097K08 map C827S, complete sequence Length = 137870 Score = 139 bits (70), Expect = 1e-29 Identities = 115/130 (88%) Strand = Plus / Plus Query: 99 cccaccgacgcggagctgctccaggcgcagtccgacctgtggcgccacagcctctgctac 158 ||||||||||| |||||||| || || ||| ||||||| |||||||||||| ||| |||| Sbjct: 43542 cccaccgacgctgagctgctgcaagcacaggccgacctatggcgccacagcttctcctac 43601 Query: 159 ctcacgcccatgtcgctccgctgcgccgtcgacctcggcgtccccacggccatccaccgc 218 |||||| ||||| ||||||||||||||| | | |||||| ||||||| |||||||||||| Sbjct: 43602 ctcacggccatggcgctccgctgcgccgccaagctcggcatccccaccgccatccaccgc 43661 Query: 219 ctcggcggcg 228 |||||||||| Sbjct: 43662 ctcggcggcg 43671 Score = 48.1 bits (24), Expect = 0.034 Identities = 30/32 (93%) Strand = Plus / Plus Query: 507 gtgccctcgccgttcgaggacgtgcacggcgc 538 ||||| |||||||||||||||| ||||||||| Sbjct: 43986 gtgccgtcgccgttcgaggacgcgcacggcgc 44017
>gb|AC147811.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0026P08 map near C827S, complete sequence Length = 148676 Score = 139 bits (70), Expect = 1e-29 Identities = 115/130 (88%) Strand = Plus / Minus Query: 99 cccaccgacgcggagctgctccaggcgcagtccgacctgtggcgccacagcctctgctac 158 ||||||||||| |||||||| || || ||| ||||||| |||||||||||| ||| |||| Sbjct: 52233 cccaccgacgctgagctgctgcaagcacaggccgacctatggcgccacagcttctcctac 52174 Query: 159 ctcacgcccatgtcgctccgctgcgccgtcgacctcggcgtccccacggccatccaccgc 218 |||||| ||||| ||||||||||||||| | | |||||| ||||||| |||||||||||| Sbjct: 52173 ctcacggccatggcgctccgctgcgccgccaagctcggcatccccaccgccatccaccgc 52114 Query: 219 ctcggcggcg 228 |||||||||| Sbjct: 52113 ctcggcggcg 52104 Score = 48.1 bits (24), Expect = 0.034 Identities = 30/32 (93%) Strand = Plus / Minus Query: 507 gtgccctcgccgttcgaggacgtgcacggcgc 538 ||||| |||||||||||||||| ||||||||| Sbjct: 51789 gtgccgtcgccgttcgaggacgcgcacggcgc 51758
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 139 bits (70), Expect = 1e-29 Identities = 115/130 (88%) Strand = Plus / Minus Query: 99 cccaccgacgcggagctgctccaggcgcagtccgacctgtggcgccacagcctctgctac 158 ||||||||||| |||||||| || || ||| ||||||| |||||||||||| ||| |||| Sbjct: 7139013 cccaccgacgctgagctgctgcaagcacaggccgacctatggcgccacagcttctcctac 7138954 Query: 159 ctcacgcccatgtcgctccgctgcgccgtcgacctcggcgtccccacggccatccaccgc 218 |||||| ||||| ||||||||||||||| | | |||||| ||||||| |||||||||||| Sbjct: 7138953 ctcacggccatggcgctccgctgcgccgccaagctcggcatccccaccgccatccaccgc 7138894 Query: 219 ctcggcggcg 228 |||||||||| Sbjct: 7138893 ctcggcggcg 7138884 Score = 127 bits (64), Expect = 5e-26 Identities = 166/200 (83%) Strand = Plus / Minus Query: 91 tgttcgtccccaccgacgcggagctgctccaggcgcagtccgacctgtggcgccacagcc 150 |||| ||||| ||||||| ||| |||| || ||||| |||| ||||||||||||| || Sbjct: 11303067 tgttggtcccgaccgacgacgagatgctgcaaacgcaggccgagctgtggcgccacaccc 11303008 Query: 151 tctgctacctcacgcccatgtcgctccgctgcgccgtcgacctcggcgtccccacggcca 210 ||| ||||||||| ||||| | ||||| ||||||||| |||||||| ||||||| |||| Sbjct: 11303007 tctcctacctcacctccatgactctccggtgcgccgtccacctcggcatccccaccgcca 11302948 Query: 211 tccaccgcctcggcggcgccgcgtccccgtccgaactggtcgccgccctgtccctgcccg 270 ||||||||| |||||||||||| || | | |||| || ||| |||| |||||||| ||| Sbjct: 11302947 tccaccgccacggcggcgccgcctcgctgcccgacctcgtcaccgcgctgtccctcccca 11302888 Query: 271 cgtccaagctgccgttcctc 290 || ||||||| || |||||| Sbjct: 11302887 cggccaagctccccttcctc 11302868 Score = 123 bits (62), Expect = 7e-25 Identities = 119/138 (86%) Strand = Plus / Minus Query: 99 cccaccgacgcggagctgctccaggcgcagtccgacctgtggcgccacagcctctgctac 158 ||||| ||||| |||||||| || |||||| |||| ||||||||||||||||||| |||| Sbjct: 11494867 cccactgacgctgagctgctgcaagcgcaggccgatctgtggcgccacagcctctactac 11494808 Query: 159 ctcacgcccatgtcgctccgctgcgccgtcgacctcggcgtccccacggccatccaccgc 218 ||||| ||| | |||||||||||| || | || ||| ||||||| |||||||||||| Sbjct: 11494807 ctcacctccacgggactccgctgcgccatcaagctgggcatccccaccgccatccaccgc 11494748 Query: 219 ctcggcggcgccgcgtcc 236 |||||||||||||||||| Sbjct: 11494747 ctcggcggcgccgcgtcc 11494730 Score = 119 bits (60), Expect = 1e-23 Identities = 96/108 (88%) Strand = Plus / Plus Query: 120 caggcgcagtccgacctgtggcgccacagcctctgctacctcacgcccatgtcgctccgc 179 ||||||||| || ||||||||||||||||||||| ||||||||| ||||| ||||||| Sbjct: 11482291 caggcgcaggccaacctgtggcgccacagcctctactacctcacctccatggcgctccgg 11482350 Query: 180 tgcgccgtcgacctcggcgtccccacggccatccaccgcctcggcggc 227 ||||||||| | |||||| ||||||| | ||||||||||||||||||| Sbjct: 11482351 tgcgccgtcaagctcggcatccccacagtcatccaccgcctcggcggc 11482398 Score = 103 bits (52), Expect = 7e-19 Identities = 136/164 (82%) Strand = Plus / Minus Query: 102 accgacgcggagctgctccaggcgcagtccgacctgtggcgccacagcctctgctacctc 161 ||||||| |||||||| || |||||| |||||||||||||||||||||||| || | || Sbjct: 11331664 accgacgacgagctgctgcacgcgcaggccgacctgtggcgccacagcctctacttcgtc 11331605 Query: 162 acgcccatgtcgctccgctgcgccgtcgacctcggcgtccccacggccatccaccgcctc 221 ||| ||||| || ||| ||||||||| | |||||| ||||||| |||||||||||| Sbjct: 11331604 acgtccatggcgttccagtgcgccgtcaagctcggcatccccaccgccatccaccgcgct 11331545 Query: 222 ggcggcgccgcgtccccgtccgaactggtcgccgccctgtccct 265 || ||| |||| || | | |||| || ||||||||||||||||| Sbjct: 11331544 ggtggcaccgcctcgctgcccgaccttgtcgccgccctgtccct 11331501 Score = 101 bits (51), Expect = 3e-18 Identities = 90/103 (87%) Strand = Plus / Minus Query: 130 ccgacctgtggcgccacagcctctgctacctcacgcccatgtcgctccgctgcgccgtcg 189 |||||||||||||||||||||||| |||||||||| ||||| |||||||||||||||| Sbjct: 11550532 ccgacctgtggcgccacagcctctactacctcacgtccatgggcctccgctgcgccgtcg 11550473 Query: 190 acctcggcgtccccacggccatccaccgcctcggcggcgccgc 232 | |||||| |||| || | ||||| |||||||||||||||| Sbjct: 11550472 agctcggcatcccgaccacgatccatggcctcggcggcgccgc 11550430 Score = 89.7 bits (45), Expect = 1e-14 Identities = 153/189 (80%) Strand = Plus / Minus Query: 102 accgacgcggagctgctccaggcgcagtccgacctgtggcgccacagcctctgctacctc 161 ||||||| |||||||| || |||||| ||||| ||| |||||||||||||| || | || Sbjct: 11355312 accgacgacgagctgctgcacgcgcaggccgacatgttgcgccacagcctctacttcgtc 11355253 Query: 162 acgcccatgtcgctccgctgcgccgtcgacctcggcgtccccacggccatccaccgcctc 221 ||| ||||| || | | ||||||||| | |||||| ||||||| |||||||||||| | Sbjct: 11355252 acgtccatggcgtttcagtgcgccgtcaagctcggcatccccaccgccatccaccgcgcc 11355193 Query: 222 ggcggcgccgcgtccccgtccgaactggtcgccgccctgtccctgcccgcgtccaagctg 281 |||||| |||| || | | |||| || ||||||||||| ||||| || | ||||||| Sbjct: 11355192 ggcggcaccgcctcgctgcccgaccttgtcgccgccctctccctcccgcccgccaagctc 11355133 Query: 282 ccgttcctc 290 ||||||||| Sbjct: 11355132 ccgttcctc 11355124 Score = 71.9 bits (36), Expect = 2e-09 Identities = 78/92 (84%) Strand = Plus / Minus Query: 199 tccccacggccatccaccgcctcggcggcgccgcgtccccgtccgaactggtcgccgccc 258 ||||||| |||||||||||| ||||||||||||||| | | |||| ||||| |||| | Sbjct: 11439513 tccccaccgccatccaccgcgccggcggcgccgcgtcgctgcccgacctggttaccgctc 11439454 Query: 259 tgtccctgcccgcgtccaagctgccgttcctc 290 ||||||| || |||||||||| ||||||||| Sbjct: 11439453 tgtccctcccgccgtccaagctaccgttcctc 11439422 Score = 67.9 bits (34), Expect = 4e-08 Identities = 108/130 (83%), Gaps = 2/130 (1%) Strand = Plus / Minus Query: 410 cagccagacggccatcgtgcgcgccgcggcctcgcgccactacgtggaggcggccatggg 469 |||||||||| || |||||| ||||||| | ||||| |||||| | |||||||| |||| Sbjct: 11494544 cagccagacgtccttcgtgctcgccgcgacgtcgcggcactacctcgaggcggcgctggg 11494485 Query: 470 cctggccgactggttcaggaaggacttcgacggggccg-tgccctcgccgttcgaggacg 528 |||| ||| ||||||||||||||| | | || |||| | || || ||||||||||||| Sbjct: 11494484 gctggacgagtggttcaggaaggacgt-ggcgccgccgctcccgtccccgttcgaggacg 11494426 Query: 529 tgcacggcgc 538 |||||||||| Sbjct: 11494425 tgcacggcgc 11494416 Score = 63.9 bits (32), Expect = 6e-07 Identities = 56/64 (87%) Strand = Plus / Minus Query: 513 tcgccgttcgaggacgtgcacggcgccgccatcttcgaggagagcatggcgctcctcgac 572 |||||||||||||| |||||||||||||| | ||||| |||||||||||| ||| ||| Sbjct: 11354862 tcgccgttcgaggaggtgcacggcgccgcgctgttcgacgagagcatggcgaaccttgac 11354803 Query: 573 ccgg 576 |||| Sbjct: 11354802 ccgg 11354799 Score = 54.0 bits (27), Expect = 6e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 110 ggagctgctccaggcgcagtccgacctgtggcgccacagcctctgctacctcacg 164 ||||||||| || || ||| |||| || ||||||||||||||||||||| ||||| Sbjct: 11439602 ggagctgctgcaagcacaggccgatctatggcgccacagcctctgctacatcacg 11439548 Score = 48.1 bits (24), Expect = 0.034 Identities = 30/32 (93%) Strand = Plus / Minus Query: 507 gtgccctcgccgttcgaggacgtgcacggcgc 538 ||||| ||||||||||||||| |||||||||| Sbjct: 11550146 gtgccgtcgccgttcgaggacctgcacggcgc 11550115 Score = 48.1 bits (24), Expect = 0.034 Identities = 42/48 (87%) Strand = Plus / Plus Query: 447 cactacgtggaggcggccatgggcctggccgactggttcaggaaggac 494 ||||||||||||||||| | || |||| ||||||||||| ||||||| Sbjct: 11482654 cactacgtggaggcggcgctcgggctggacgactggttcatgaaggac 11482701 Score = 48.1 bits (24), Expect = 0.034 Identities = 42/48 (87%) Strand = Plus / Minus Query: 447 cactacgtggaggcggccatgggcctggccgactggttcaggaaggac 494 |||| |||||||||||| ||||| || || ||||||||| |||||||| Sbjct: 11354937 cacttcgtggaggcggcgatggggctcgcggactggttcgggaaggac 11354890 Score = 48.1 bits (24), Expect = 0.034 Identities = 54/64 (84%) Strand = Plus / Minus Query: 513 tcgccgttcgaggacgtgcacggcgccgccatcttcgaggagagcatggcgctcctcgac 572 |||||||||||||| ||||||||||| | | ||||| |||||||||||| |||| || Sbjct: 11331223 tcgccgttcgaggaggtgcacggcgcggtgctgttcgacgagagcatggcgagcctccac 11331164 Query: 573 ccgg 576 |||| Sbjct: 11331163 ccgg 11331160 Score = 48.1 bits (24), Expect = 0.034 Identities = 30/32 (93%) Strand = Plus / Minus Query: 507 gtgccctcgccgttcgaggacgtgcacggcgc 538 ||||| |||||||||||||||| ||||||||| Sbjct: 7138569 gtgccgtcgccgttcgaggacgcgcacggcgc 7138538 Score = 46.1 bits (23), Expect = 0.14 Identities = 65/79 (82%) Strand = Plus / Minus Query: 154 gctacctcacgcccatgtcgctccgctgcgccgtcgacctcggcgtccccacggccatcc 213 ||||| ||| ||||||| ||||| |||||||| || |||||| ||||| || |||| Sbjct: 19031109 gctacatcaagcccatggcgctcaagtgcgccgtggagctcggcatccccgacgcgatcc 19031050 Query: 214 accgcctcggcggcgccgc 232 |||||| |||||||||||| Sbjct: 19031049 accgccgcggcggcgccgc 19031031 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 325 tcttcacctccaccgacgccg 345 ||||||||||||||||||||| Sbjct: 25593958 tcttcacctccaccgacgccg 25593978 Score = 42.1 bits (21), Expect = 2.1 Identities = 48/57 (84%) Strand = Plus / Minus Query: 334 ccaccgacgccggaacgtaccgcctcaaccctctctcgtacctcctcgtggacggcg 390 ||||||| ||||||||||||| |||| ||| || || | |||||| |||||||||| Sbjct: 11439369 ccaccgataccggaacgtaccgtctcaccccgctgtcatgcctcctggtggacggcg 11439313 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 587 gctcatccacgacgccgtcg 606 |||||||||||||||||||| Sbjct: 21883010 gctcatccacgacgccgtcg 21883029 Score = 40.1 bits (20), Expect = 8.3 Identities = 41/48 (85%) Strand = Plus / Minus Query: 447 cactacgtggaggcggccatgggcctggccgactggttcaggaaggac 494 |||| ||| |||||||| ||||| || || || ||||||||||||||| Sbjct: 11331292 cacttcgtcgaggcggcgatggggctcgcggagtggttcaggaaggac 11331245
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 139 bits (70), Expect = 1e-29 Identities = 115/130 (88%) Strand = Plus / Minus Query: 99 cccaccgacgcggagctgctccaggcgcagtccgacctgtggcgccacagcctctgctac 158 ||||||||||| |||||||| || || ||| ||||||| |||||||||||| ||| |||| Sbjct: 7204984 cccaccgacgctgagctgctgcaagcacaggccgacctatggcgccacagcttctcctac 7204925 Query: 159 ctcacgcccatgtcgctccgctgcgccgtcgacctcggcgtccccacggccatccaccgc 218 |||||| ||||| ||||||||||||||| | | |||||| ||||||| |||||||||||| Sbjct: 7204924 ctcacggccatggcgctccgctgcgccgccaagctcggcatccccaccgccatccaccgc 7204865 Query: 219 ctcggcggcg 228 |||||||||| Sbjct: 7204864 ctcggcggcg 7204855 Score = 127 bits (64), Expect = 5e-26 Identities = 166/200 (83%) Strand = Plus / Minus Query: 91 tgttcgtccccaccgacgcggagctgctccaggcgcagtccgacctgtggcgccacagcc 150 |||| ||||| ||||||| ||| |||| || ||||| |||| ||||||||||||| || Sbjct: 11382256 tgttggtcccgaccgacgacgagatgctgcaaacgcaggccgagctgtggcgccacaccc 11382197 Query: 151 tctgctacctcacgcccatgtcgctccgctgcgccgtcgacctcggcgtccccacggcca 210 ||| ||||||||| ||||| | ||||| ||||||||| |||||||| ||||||| |||| Sbjct: 11382196 tctcctacctcacctccatgactctccggtgcgccgtccacctcggcatccccaccgcca 11382137 Query: 211 tccaccgcctcggcggcgccgcgtccccgtccgaactggtcgccgccctgtccctgcccg 270 ||||||||| |||||||||||| || | | |||| || ||| |||| |||||||| ||| Sbjct: 11382136 tccaccgccacggcggcgccgcctcgctgcccgacctcgtcaccgcgctgtccctcccca 11382077 Query: 271 cgtccaagctgccgttcctc 290 || ||||||| || |||||| Sbjct: 11382076 cggccaagctccccttcctc 11382057 Score = 123 bits (62), Expect = 7e-25 Identities = 119/138 (86%) Strand = Plus / Minus Query: 99 cccaccgacgcggagctgctccaggcgcagtccgacctgtggcgccacagcctctgctac 158 ||||| ||||| |||||||| || |||||| |||| ||||||||||||||||||| |||| Sbjct: 11574056 cccactgacgctgagctgctgcaagcgcaggccgatctgtggcgccacagcctctactac 11573997 Query: 159 ctcacgcccatgtcgctccgctgcgccgtcgacctcggcgtccccacggccatccaccgc 218 ||||| ||| | |||||||||||| || | || ||| ||||||| |||||||||||| Sbjct: 11573996 ctcacctccacgggactccgctgcgccatcaagctgggcatccccaccgccatccaccgc 11573937 Query: 219 ctcggcggcgccgcgtcc 236 |||||||||||||||||| Sbjct: 11573936 ctcggcggcgccgcgtcc 11573919 Score = 119 bits (60), Expect = 1e-23 Identities = 96/108 (88%) Strand = Plus / Plus Query: 120 caggcgcagtccgacctgtggcgccacagcctctgctacctcacgcccatgtcgctccgc 179 ||||||||| || ||||||||||||||||||||| ||||||||| ||||| ||||||| Sbjct: 11561480 caggcgcaggccaacctgtggcgccacagcctctactacctcacctccatggcgctccgg 11561539 Query: 180 tgcgccgtcgacctcggcgtccccacggccatccaccgcctcggcggc 227 ||||||||| | |||||| ||||||| | ||||||||||||||||||| Sbjct: 11561540 tgcgccgtcaagctcggcatccccacagtcatccaccgcctcggcggc 11561587 Score = 103 bits (52), Expect = 7e-19 Identities = 136/164 (82%) Strand = Plus / Minus Query: 102 accgacgcggagctgctccaggcgcagtccgacctgtggcgccacagcctctgctacctc 161 ||||||| |||||||| || |||||| |||||||||||||||||||||||| || | || Sbjct: 11410853 accgacgacgagctgctgcacgcgcaggccgacctgtggcgccacagcctctacttcgtc 11410794 Query: 162 acgcccatgtcgctccgctgcgccgtcgacctcggcgtccccacggccatccaccgcctc 221 ||| ||||| || ||| ||||||||| | |||||| ||||||| |||||||||||| Sbjct: 11410793 acgtccatggcgttccagtgcgccgtcaagctcggcatccccaccgccatccaccgcgct 11410734 Query: 222 ggcggcgccgcgtccccgtccgaactggtcgccgccctgtccct 265 || ||| |||| || | | |||| || ||||||||||||||||| Sbjct: 11410733 ggtggcaccgcctcgctgcccgaccttgtcgccgccctgtccct 11410690 Score = 101 bits (51), Expect = 3e-18 Identities = 90/103 (87%) Strand = Plus / Minus Query: 130 ccgacctgtggcgccacagcctctgctacctcacgcccatgtcgctccgctgcgccgtcg 189 |||||||||||||||||||||||| |||||||||| ||||| |||||||||||||||| Sbjct: 11629721 ccgacctgtggcgccacagcctctactacctcacgtccatgggcctccgctgcgccgtcg 11629662 Query: 190 acctcggcgtccccacggccatccaccgcctcggcggcgccgc 232 | |||||| |||| || | ||||| |||||||||||||||| Sbjct: 11629661 agctcggcatcccgaccacgatccatggcctcggcggcgccgc 11629619 Score = 89.7 bits (45), Expect = 1e-14 Identities = 153/189 (80%) Strand = Plus / Minus Query: 102 accgacgcggagctgctccaggcgcagtccgacctgtggcgccacagcctctgctacctc 161 ||||||| |||||||| || |||||| ||||| ||| |||||||||||||| || | || Sbjct: 11434501 accgacgacgagctgctgcacgcgcaggccgacatgttgcgccacagcctctacttcgtc 11434442 Query: 162 acgcccatgtcgctccgctgcgccgtcgacctcggcgtccccacggccatccaccgcctc 221 ||| ||||| || | | ||||||||| | |||||| ||||||| |||||||||||| | Sbjct: 11434441 acgtccatggcgtttcagtgcgccgtcaagctcggcatccccaccgccatccaccgcgcc 11434382 Query: 222 ggcggcgccgcgtccccgtccgaactggtcgccgccctgtccctgcccgcgtccaagctg 281 |||||| |||| || | | |||| || ||||||||||| ||||| || | ||||||| Sbjct: 11434381 ggcggcaccgcctcgctgcccgaccttgtcgccgccctctccctcccgcccgccaagctc 11434322 Query: 282 ccgttcctc 290 ||||||||| Sbjct: 11434321 ccgttcctc 11434313 Score = 71.9 bits (36), Expect = 2e-09 Identities = 78/92 (84%) Strand = Plus / Minus Query: 199 tccccacggccatccaccgcctcggcggcgccgcgtccccgtccgaactggtcgccgccc 258 ||||||| |||||||||||| ||||||||||||||| | | |||| ||||| |||| | Sbjct: 11518702 tccccaccgccatccaccgcgccggcggcgccgcgtcgctgcccgacctggttaccgctc 11518643 Query: 259 tgtccctgcccgcgtccaagctgccgttcctc 290 ||||||| || |||||||||| ||||||||| Sbjct: 11518642 tgtccctcccgccgtccaagctaccgttcctc 11518611 Score = 67.9 bits (34), Expect = 4e-08 Identities = 108/130 (83%), Gaps = 2/130 (1%) Strand = Plus / Minus Query: 410 cagccagacggccatcgtgcgcgccgcggcctcgcgccactacgtggaggcggccatggg 469 |||||||||| || |||||| ||||||| | ||||| |||||| | |||||||| |||| Sbjct: 11573733 cagccagacgtccttcgtgctcgccgcgacgtcgcggcactacctcgaggcggcgctggg 11573674 Query: 470 cctggccgactggttcaggaaggacttcgacggggccg-tgccctcgccgttcgaggacg 528 |||| ||| ||||||||||||||| | | || |||| | || || ||||||||||||| Sbjct: 11573673 gctggacgagtggttcaggaaggacgt-ggcgccgccgctcccgtccccgttcgaggacg 11573615 Query: 529 tgcacggcgc 538 |||||||||| Sbjct: 11573614 tgcacggcgc 11573605 Score = 63.9 bits (32), Expect = 6e-07 Identities = 56/64 (87%) Strand = Plus / Minus Query: 513 tcgccgttcgaggacgtgcacggcgccgccatcttcgaggagagcatggcgctcctcgac 572 |||||||||||||| |||||||||||||| | ||||| |||||||||||| ||| ||| Sbjct: 11434051 tcgccgttcgaggaggtgcacggcgccgcgctgttcgacgagagcatggcgaaccttgac 11433992 Query: 573 ccgg 576 |||| Sbjct: 11433991 ccgg 11433988 Score = 54.0 bits (27), Expect = 6e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 110 ggagctgctccaggcgcagtccgacctgtggcgccacagcctctgctacctcacg 164 ||||||||| || || ||| |||| || ||||||||||||||||||||| ||||| Sbjct: 11518791 ggagctgctgcaagcacaggccgatctatggcgccacagcctctgctacatcacg 11518737 Score = 48.1 bits (24), Expect = 0.034 Identities = 30/32 (93%) Strand = Plus / Minus Query: 507 gtgccctcgccgttcgaggacgtgcacggcgc 538 ||||| ||||||||||||||| |||||||||| Sbjct: 11629335 gtgccgtcgccgttcgaggacctgcacggcgc 11629304 Score = 48.1 bits (24), Expect = 0.034 Identities = 42/48 (87%) Strand = Plus / Plus Query: 447 cactacgtggaggcggccatgggcctggccgactggttcaggaaggac 494 ||||||||||||||||| | || |||| ||||||||||| ||||||| Sbjct: 11561843 cactacgtggaggcggcgctcgggctggacgactggttcatgaaggac 11561890 Score = 48.1 bits (24), Expect = 0.034 Identities = 42/48 (87%) Strand = Plus / Minus Query: 447 cactacgtggaggcggccatgggcctggccgactggttcaggaaggac 494 |||| |||||||||||| ||||| || || ||||||||| |||||||| Sbjct: 11434126 cacttcgtggaggcggcgatggggctcgcggactggttcgggaaggac 11434079 Score = 48.1 bits (24), Expect = 0.034 Identities = 54/64 (84%) Strand = Plus / Minus Query: 513 tcgccgttcgaggacgtgcacggcgccgccatcttcgaggagagcatggcgctcctcgac 572 |||||||||||||| ||||||||||| | | ||||| |||||||||||| |||| || Sbjct: 11410412 tcgccgttcgaggaggtgcacggcgcggtgctgttcgacgagagcatggcgagcctccac 11410353 Query: 573 ccgg 576 |||| Sbjct: 11410352 ccgg 11410349 Score = 48.1 bits (24), Expect = 0.034 Identities = 30/32 (93%) Strand = Plus / Minus Query: 507 gtgccctcgccgttcgaggacgtgcacggcgc 538 ||||| |||||||||||||||| ||||||||| Sbjct: 7204540 gtgccgtcgccgttcgaggacgcgcacggcgc 7204509 Score = 46.1 bits (23), Expect = 0.14 Identities = 65/79 (82%) Strand = Plus / Minus Query: 154 gctacctcacgcccatgtcgctccgctgcgccgtcgacctcggcgtccccacggccatcc 213 ||||| ||| ||||||| ||||| |||||||| || |||||| ||||| || |||| Sbjct: 19189758 gctacatcaagcccatggcgctcaagtgcgccgtggagctcggcatccccgacgcgatcc 19189699 Query: 214 accgcctcggcggcgccgc 232 |||||| |||||||||||| Sbjct: 19189698 accgccgcggcggcgccgc 19189680 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 325 tcttcacctccaccgacgccg 345 ||||||||||||||||||||| Sbjct: 25912628 tcttcacctccaccgacgccg 25912648 Score = 42.1 bits (21), Expect = 2.1 Identities = 48/57 (84%) Strand = Plus / Minus Query: 334 ccaccgacgccggaacgtaccgcctcaaccctctctcgtacctcctcgtggacggcg 390 ||||||| ||||||||||||| |||| ||| || || | |||||| |||||||||| Sbjct: 11518558 ccaccgataccggaacgtaccgtctcaccccgctgtcatgcctcctggtggacggcg 11518502 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 587 gctcatccacgacgccgtcg 606 |||||||||||||||||||| Sbjct: 22193209 gctcatccacgacgccgtcg 22193228 Score = 40.1 bits (20), Expect = 8.3 Identities = 41/48 (85%) Strand = Plus / Minus Query: 447 cactacgtggaggcggccatgggcctggccgactggttcaggaaggac 494 |||| ||| |||||||| ||||| || || || ||||||||||||||| Sbjct: 11410481 cacttcgtcgaggcggcgatggggctcgcggagtggttcaggaaggac 11410434
>gb|AC112208.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0015P05 map C53961S, complete sequence Length = 175121 Score = 127 bits (64), Expect = 5e-26 Identities = 166/200 (83%) Strand = Plus / Minus Query: 91 tgttcgtccccaccgacgcggagctgctccaggcgcagtccgacctgtggcgccacagcc 150 |||| ||||| ||||||| ||| |||| || ||||| |||| ||||||||||||| || Sbjct: 89425 tgttggtcccgaccgacgacgagatgctgcaaacgcaggccgagctgtggcgccacaccc 89366 Query: 151 tctgctacctcacgcccatgtcgctccgctgcgccgtcgacctcggcgtccccacggcca 210 ||| ||||||||| ||||| | ||||| ||||||||| |||||||| ||||||| |||| Sbjct: 89365 tctcctacctcacctccatgactctccggtgcgccgtccacctcggcatccccaccgcca 89306 Query: 211 tccaccgcctcggcggcgccgcgtccccgtccgaactggtcgccgccctgtccctgcccg 270 ||||||||| |||||||||||| || | | |||| || ||| |||| |||||||| ||| Sbjct: 89305 tccaccgccacggcggcgccgcctcgctgcccgacctcgtcaccgcgctgtccctcccca 89246 Query: 271 cgtccaagctgccgttcctc 290 || ||||||| || |||||| Sbjct: 89245 cggccaagctccccttcctc 89226 Score = 103 bits (52), Expect = 7e-19 Identities = 136/164 (82%) Strand = Plus / Minus Query: 102 accgacgcggagctgctccaggcgcagtccgacctgtggcgccacagcctctgctacctc 161 ||||||| |||||||| || |||||| |||||||||||||||||||||||| || | || Sbjct: 118022 accgacgacgagctgctgcacgcgcaggccgacctgtggcgccacagcctctacttcgtc 117963 Query: 162 acgcccatgtcgctccgctgcgccgtcgacctcggcgtccccacggccatccaccgcctc 221 ||| ||||| || ||| ||||||||| | |||||| ||||||| |||||||||||| Sbjct: 117962 acgtccatggcgttccagtgcgccgtcaagctcggcatccccaccgccatccaccgcgct 117903 Query: 222 ggcggcgccgcgtccccgtccgaactggtcgccgccctgtccct 265 || ||| |||| || | | |||| || ||||||||||||||||| Sbjct: 117902 ggtggcaccgcctcgctgcccgaccttgtcgccgccctgtccct 117859 Score = 89.7 bits (45), Expect = 1e-14 Identities = 153/189 (80%) Strand = Plus / Minus Query: 102 accgacgcggagctgctccaggcgcagtccgacctgtggcgccacagcctctgctacctc 161 ||||||| |||||||| || |||||| ||||| ||| |||||||||||||| || | || Sbjct: 141670 accgacgacgagctgctgcacgcgcaggccgacatgttgcgccacagcctctacttcgtc 141611 Query: 162 acgcccatgtcgctccgctgcgccgtcgacctcggcgtccccacggccatccaccgcctc 221 ||| ||||| || | | ||||||||| | |||||| ||||||| |||||||||||| | Sbjct: 141610 acgtccatggcgtttcagtgcgccgtcaagctcggcatccccaccgccatccaccgcgcc 141551 Query: 222 ggcggcgccgcgtccccgtccgaactggtcgccgccctgtccctgcccgcgtccaagctg 281 |||||| |||| || | | |||| || ||||||||||| ||||| || | ||||||| Sbjct: 141550 ggcggcaccgcctcgctgcccgaccttgtcgccgccctctccctcccgcccgccaagctc 141491 Query: 282 ccgttcctc 290 ||||||||| Sbjct: 141490 ccgttcctc 141482 Score = 63.9 bits (32), Expect = 6e-07 Identities = 56/64 (87%) Strand = Plus / Minus Query: 513 tcgccgttcgaggacgtgcacggcgccgccatcttcgaggagagcatggcgctcctcgac 572 |||||||||||||| |||||||||||||| | ||||| |||||||||||| ||| ||| Sbjct: 141220 tcgccgttcgaggaggtgcacggcgccgcgctgttcgacgagagcatggcgaaccttgac 141161 Query: 573 ccgg 576 |||| Sbjct: 141160 ccgg 141157 Score = 48.1 bits (24), Expect = 0.034 Identities = 42/48 (87%) Strand = Plus / Minus Query: 447 cactacgtggaggcggccatgggcctggccgactggttcaggaaggac 494 |||| |||||||||||| ||||| || || ||||||||| |||||||| Sbjct: 141295 cacttcgtggaggcggcgatggggctcgcggactggttcgggaaggac 141248 Score = 48.1 bits (24), Expect = 0.034 Identities = 54/64 (84%) Strand = Plus / Minus Query: 513 tcgccgttcgaggacgtgcacggcgccgccatcttcgaggagagcatggcgctcctcgac 572 |||||||||||||| ||||||||||| | | ||||| |||||||||||| |||| || Sbjct: 117581 tcgccgttcgaggaggtgcacggcgcggtgctgttcgacgagagcatggcgagcctccac 117522 Query: 573 ccgg 576 |||| Sbjct: 117521 ccgg 117518 Score = 40.1 bits (20), Expect = 8.3 Identities = 41/48 (85%) Strand = Plus / Minus Query: 447 cactacgtggaggcggccatgggcctggccgactggttcaggaaggac 494 |||| ||| |||||||| ||||| || || || ||||||||||||||| Sbjct: 117650 cacttcgtcgaggcggcgatggggctcgcggagtggttcaggaaggac 117603
>gb|AC138195.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0005P21, complete sequence Length = 147381 Score = 123 bits (62), Expect = 7e-25 Identities = 119/138 (86%) Strand = Plus / Plus Query: 99 cccaccgacgcggagctgctccaggcgcagtccgacctgtggcgccacagcctctgctac 158 ||||| ||||| |||||||| || |||||| |||| ||||||||||||||||||| |||| Sbjct: 118921 cccactgacgctgagctgctgcaagcgcaggccgatctgtggcgccacagcctctactac 118980 Query: 159 ctcacgcccatgtcgctccgctgcgccgtcgacctcggcgtccccacggccatccaccgc 218 ||||| ||| | |||||||||||| || | || ||| ||||||| |||||||||||| Sbjct: 118981 ctcacctccacgggactccgctgcgccatcaagctgggcatccccaccgccatccaccgc 119040 Query: 219 ctcggcggcgccgcgtcc 236 |||||||||||||||||| Sbjct: 119041 ctcggcggcgccgcgtcc 119058 Score = 119 bits (60), Expect = 1e-23 Identities = 96/108 (88%) Strand = Plus / Minus Query: 120 caggcgcagtccgacctgtggcgccacagcctctgctacctcacgcccatgtcgctccgc 179 ||||||||| || ||||||||||||||||||||| ||||||||| ||||| ||||||| Sbjct: 131497 caggcgcaggccaacctgtggcgccacagcctctactacctcacctccatggcgctccgg 131438 Query: 180 tgcgccgtcgacctcggcgtccccacggccatccaccgcctcggcggc 227 ||||||||| | |||||| ||||||| | ||||||||||||||||||| Sbjct: 131437 tgcgccgtcaagctcggcatccccacagtcatccaccgcctcggcggc 131390 Score = 101 bits (51), Expect = 3e-18 Identities = 90/103 (87%) Strand = Plus / Plus Query: 130 ccgacctgtggcgccacagcctctgctacctcacgcccatgtcgctccgctgcgccgtcg 189 |||||||||||||||||||||||| |||||||||| ||||| |||||||||||||||| Sbjct: 63256 ccgacctgtggcgccacagcctctactacctcacgtccatgggcctccgctgcgccgtcg 63315 Query: 190 acctcggcgtccccacggccatccaccgcctcggcggcgccgc 232 | |||||| |||| || | ||||| |||||||||||||||| Sbjct: 63316 agctcggcatcccgaccacgatccatggcctcggcggcgccgc 63358 Score = 67.9 bits (34), Expect = 4e-08 Identities = 108/130 (83%), Gaps = 2/130 (1%) Strand = Plus / Plus Query: 410 cagccagacggccatcgtgcgcgccgcggcctcgcgccactacgtggaggcggccatggg 469 |||||||||| || |||||| ||||||| | ||||| |||||| | |||||||| |||| Sbjct: 119244 cagccagacgtccttcgtgctcgccgcgacgtcgcggcactacctcgaggcggcgctggg 119303 Query: 470 cctggccgactggttcaggaaggacttcgacggggccg-tgccctcgccgttcgaggacg 528 |||| ||| ||||||||||||||| | | || |||| | || || ||||||||||||| Sbjct: 119304 gctggacgagtggttcaggaaggacgt-ggcgccgccgctcccgtccccgttcgaggacg 119362 Query: 529 tgcacggcgc 538 |||||||||| Sbjct: 119363 tgcacggcgc 119372 Score = 48.1 bits (24), Expect = 0.034 Identities = 42/48 (87%) Strand = Plus / Minus Query: 447 cactacgtggaggcggccatgggcctggccgactggttcaggaaggac 494 ||||||||||||||||| | || |||| ||||||||||| ||||||| Sbjct: 131134 cactacgtggaggcggcgctcgggctggacgactggttcatgaaggac 131087 Score = 48.1 bits (24), Expect = 0.034 Identities = 30/32 (93%) Strand = Plus / Plus Query: 507 gtgccctcgccgttcgaggacgtgcacggcgc 538 ||||| ||||||||||||||| |||||||||| Sbjct: 63642 gtgccgtcgccgttcgaggacctgcacggcgc 63673
>gb|AC135793.4| Oryza sativa chromosome 11 BAC clone OSJNBb0017P15, complete sequence Length = 128418 Score = 123 bits (62), Expect = 7e-25 Identities = 119/138 (86%) Strand = Plus / Plus Query: 99 cccaccgacgcggagctgctccaggcgcagtccgacctgtggcgccacagcctctgctac 158 ||||| ||||| |||||||| || |||||| |||| ||||||||||||||||||| |||| Sbjct: 4670 cccactgacgctgagctgctgcaagcgcaggccgatctgtggcgccacagcctctactac 4729 Query: 159 ctcacgcccatgtcgctccgctgcgccgtcgacctcggcgtccccacggccatccaccgc 218 ||||| ||| | |||||||||||| || | || ||| ||||||| |||||||||||| Sbjct: 4730 ctcacctccacgggactccgctgcgccatcaagctgggcatccccaccgccatccaccgc 4789 Query: 219 ctcggcggcgccgcgtcc 236 |||||||||||||||||| Sbjct: 4790 ctcggcggcgccgcgtcc 4807 Score = 119 bits (60), Expect = 1e-23 Identities = 96/108 (88%) Strand = Plus / Minus Query: 120 caggcgcagtccgacctgtggcgccacagcctctgctacctcacgcccatgtcgctccgc 179 ||||||||| || ||||||||||||||||||||| ||||||||| ||||| ||||||| Sbjct: 17246 caggcgcaggccaacctgtggcgccacagcctctactacctcacctccatggcgctccgg 17187 Query: 180 tgcgccgtcgacctcggcgtccccacggccatccaccgcctcggcggc 227 ||||||||| | |||||| ||||||| | ||||||||||||||||||| Sbjct: 17186 tgcgccgtcaagctcggcatccccacagtcatccaccgcctcggcggc 17139 Score = 71.9 bits (36), Expect = 2e-09 Identities = 78/92 (84%) Strand = Plus / Plus Query: 199 tccccacggccatccaccgcctcggcggcgccgcgtccccgtccgaactggtcgccgccc 258 ||||||| |||||||||||| ||||||||||||||| | | |||| ||||| |||| | Sbjct: 60024 tccccaccgccatccaccgcgccggcggcgccgcgtcgctgcccgacctggttaccgctc 60083 Query: 259 tgtccctgcccgcgtccaagctgccgttcctc 290 ||||||| || |||||||||| ||||||||| Sbjct: 60084 tgtccctcccgccgtccaagctaccgttcctc 60115 Score = 67.9 bits (34), Expect = 4e-08 Identities = 108/130 (83%), Gaps = 2/130 (1%) Strand = Plus / Plus Query: 410 cagccagacggccatcgtgcgcgccgcggcctcgcgccactacgtggaggcggccatggg 469 |||||||||| || |||||| ||||||| | ||||| |||||| | |||||||| |||| Sbjct: 4993 cagccagacgtccttcgtgctcgccgcgacgtcgcggcactacctcgaggcggcgctggg 5052 Query: 470 cctggccgactggttcaggaaggacttcgacggggccg-tgccctcgccgttcgaggacg 528 |||| ||| ||||||||||||||| | | || |||| | || || ||||||||||||| Sbjct: 5053 gctggacgagtggttcaggaaggacgt-ggcgccgccgctcccgtccccgttcgaggacg 5111 Query: 529 tgcacggcgc 538 |||||||||| Sbjct: 5112 tgcacggcgc 5121 Score = 54.0 bits (27), Expect = 6e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 110 ggagctgctccaggcgcagtccgacctgtggcgccacagcctctgctacctcacg 164 ||||||||| || || ||| |||| || ||||||||||||||||||||| ||||| Sbjct: 59935 ggagctgctgcaagcacaggccgatctatggcgccacagcctctgctacatcacg 59989 Score = 48.1 bits (24), Expect = 0.034 Identities = 42/48 (87%) Strand = Plus / Minus Query: 447 cactacgtggaggcggccatgggcctggccgactggttcaggaaggac 494 ||||||||||||||||| | || |||| ||||||||||| ||||||| Sbjct: 16883 cactacgtggaggcggcgctcgggctggacgactggttcatgaaggac 16836 Score = 42.1 bits (21), Expect = 2.1 Identities = 48/57 (84%) Strand = Plus / Plus Query: 334 ccaccgacgccggaacgtaccgcctcaaccctctctcgtacctcctcgtggacggcg 390 ||||||| ||||||||||||| |||| ||| || || | |||||| |||||||||| Sbjct: 60168 ccaccgataccggaacgtaccgtctcaccccgctgtcatgcctcctggtggacggcg 60224
>dbj|AK106179.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-208-C11, full insert sequence Length = 1362 Score = 123 bits (62), Expect = 7e-25 Identities = 119/138 (86%) Strand = Plus / Plus Query: 99 cccaccgacgcggagctgctccaggcgcagtccgacctgtggcgccacagcctctgctac 158 ||||| ||||| |||||||| || |||||| |||| ||||||||||||||||||| |||| Sbjct: 81 cccactgacgctgagctgctgcaagcgcaggccgatctgtggcgccacagcctctactac 140 Query: 159 ctcacgcccatgtcgctccgctgcgccgtcgacctcggcgtccccacggccatccaccgc 218 ||||| ||| | |||||||||||| || | || ||| ||||||| |||||||||||| Sbjct: 141 ctcacctccacgggactccgctgcgccatcaagctgggcatccccaccgccatccaccgc 200 Query: 219 ctcggcggcgccgcgtcc 236 |||||||||||||||||| Sbjct: 201 ctcggcggcgccgcgtcc 218 Score = 67.9 bits (34), Expect = 4e-08 Identities = 108/130 (83%), Gaps = 2/130 (1%) Strand = Plus / Plus Query: 410 cagccagacggccatcgtgcgcgccgcggcctcgcgccactacgtggaggcggccatggg 469 |||||||||| || |||||| ||||||| | ||||| |||||| | |||||||| |||| Sbjct: 404 cagccagacgtccttcgtgctcgccgcgacgtcgcggcactacctcgaggcggcgctggg 463 Query: 470 cctggccgactggttcaggaaggacttcgacggggccg-tgccctcgccgttcgaggacg 528 |||| ||| ||||||||||||||| | | || |||| | || || ||||||||||||| Sbjct: 464 gctggacgagtggttcaggaaggacgt-ggcgccgccgctcccgtccccgttcgaggacg 522 Query: 529 tgcacggcgc 538 |||||||||| Sbjct: 523 tgcacggcgc 532
>dbj|AK059770.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-H05, full insert sequence Length = 1264 Score = 123 bits (62), Expect = 7e-25 Identities = 119/138 (86%) Strand = Plus / Plus Query: 99 cccaccgacgcggagctgctccaggcgcagtccgacctgtggcgccacagcctctgctac 158 ||||| ||||| |||||||| || |||||| |||| ||||||||||||||||||| |||| Sbjct: 86 cccactgacgctgagctgctgcaagcgcaggccgatctgtggcgccacagcctctactac 145 Query: 159 ctcacgcccatgtcgctccgctgcgccgtcgacctcggcgtccccacggccatccaccgc 218 ||||| ||| | |||||||||||| || | || ||| ||||||| |||||||||||| Sbjct: 146 ctcacctccacgggactccgctgcgccatcaagctgggcatccccaccgccatccaccgc 205 Query: 219 ctcggcggcgccgcgtcc 236 |||||||||||||||||| Sbjct: 206 ctcggcggcgccgcgtcc 223 Score = 67.9 bits (34), Expect = 4e-08 Identities = 108/130 (83%), Gaps = 2/130 (1%) Strand = Plus / Plus Query: 410 cagccagacggccatcgtgcgcgccgcggcctcgcgccactacgtggaggcggccatggg 469 |||||||||| || |||||| ||||||| | ||||| |||||| | |||||||| |||| Sbjct: 409 cagccagacgtccttcgtgctcgccgcgacgtcgcggcactacctcgaggcggcgctggg 468 Query: 470 cctggccgactggttcaggaaggacttcgacggggccg-tgccctcgccgttcgaggacg 528 |||| ||| ||||||||||||||| | | || |||| | || || ||||||||||||| Sbjct: 469 gctggacgagtggttcaggaaggacgt-ggcgccgccgctcccgtccccgttcgaggacg 527 Query: 529 tgcacggcgc 538 |||||||||| Sbjct: 528 tgcacggcgc 537
>dbj|AK109384.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-211-A06, full insert sequence Length = 1300 Score = 119 bits (60), Expect = 1e-23 Identities = 96/108 (88%) Strand = Plus / Plus Query: 120 caggcgcagtccgacctgtggcgccacagcctctgctacctcacgcccatgtcgctccgc 179 ||||||||| || ||||||||||||||||||||| ||||||||| ||||| ||||||| Sbjct: 118 caggcgcaggccaacctgtggcgccacagcctctactacctcacctccatggcgctccgg 177 Query: 180 tgcgccgtcgacctcggcgtccccacggccatccaccgcctcggcggc 227 ||||||||| | |||||| ||||||| | ||||||||||||||||||| Sbjct: 178 tgcgccgtcaagctcggcatccccacagtcatccaccgcctcggcggc 225 Score = 48.1 bits (24), Expect = 0.034 Identities = 42/48 (87%) Strand = Plus / Plus Query: 447 cactacgtggaggcggccatgggcctggccgactggttcaggaaggac 494 ||||||||||||||||| | || |||| ||||||||||| ||||||| Sbjct: 481 cactacgtggaggcggcgctcgggctggacgactggttcatgaaggac 528
>dbj|AK061247.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-211-E05, full insert sequence Length = 1262 Score = 103 bits (52), Expect = 7e-19 Identities = 136/164 (82%) Strand = Plus / Plus Query: 102 accgacgcggagctgctccaggcgcagtccgacctgtggcgccacagcctctgctacctc 161 ||||||| |||||||| || |||||| |||||||||||||||||||||||| || | || Sbjct: 83 accgacgacgagctgctgcacgcgcaggccgacctgtggcgccacagcctctacttcgtc 142 Query: 162 acgcccatgtcgctccgctgcgccgtcgacctcggcgtccccacggccatccaccgcctc 221 ||| ||||| || ||| ||||||||| | |||||| ||||||| |||||||||||| Sbjct: 143 acgtccatggcgttccagtgcgccgtcaagctcggcatccccaccgccatccaccgcgct 202 Query: 222 ggcggcgccgcgtccccgtccgaactggtcgccgccctgtccct 265 || ||| |||| || | | |||| || ||||||||||||||||| Sbjct: 203 ggtggcaccgcctcgctgcccgaccttgtcgccgccctgtccct 246 Score = 48.1 bits (24), Expect = 0.034 Identities = 54/64 (84%) Strand = Plus / Plus Query: 513 tcgccgttcgaggacgtgcacggcgccgccatcttcgaggagagcatggcgctcctcgac 572 |||||||||||||| ||||||||||| | | ||||| |||||||||||| |||| || Sbjct: 524 tcgccgttcgaggaggtgcacggcgcggtgctgttcgacgagagcatggcgagcctccac 583 Query: 573 ccgg 576 |||| Sbjct: 584 ccgg 587 Score = 40.1 bits (20), Expect = 8.3 Identities = 41/48 (85%) Strand = Plus / Plus Query: 447 cactacgtggaggcggccatgggcctggccgactggttcaggaaggac 494 |||| ||| |||||||| ||||| || || || ||||||||||||||| Sbjct: 455 cacttcgtcgaggcggcgatggggctcgcggagtggttcaggaaggac 502
>gb|AY177404.1| Secale cereale O-methyltransferase mRNA, complete cds Length = 1373 Score = 85.7 bits (43), Expect = 2e-13 Identities = 85/99 (85%) Strand = Plus / Plus Query: 130 ccgacctgtggcgccacagcctctgctacctcacgcccatgtcgctccgctgcgccgtcg 189 |||||||||||||||||| ||| | |||||||||| ||||| |||||||||||||||| Sbjct: 94 ccgacctgtggcgccacaccctttactacctcacgtccatggggctccgctgcgccgtca 153 Query: 190 acctcggcgtccccacggccatccaccgcctcggcggcg 228 | |||||| |||| ||||| |||||| |||||| |||| Sbjct: 154 agctcggcatcccgacggcgatccacaacctcggtggcg 192 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 518 gttcgaggacgtgcacggcgccgccatcttcgaggagagca 558 |||||||||||||||| |||| || ||||||| ||||||| Sbjct: 494 gttcgaggacgtgcacagcgcgtccctcttcgacgagagca 534
>gb|AY107519.1| Zea mays PCO078033 mRNA sequence Length = 1299 Score = 83.8 bits (42), Expect = 6e-13 Identities = 57/62 (91%) Strand = Plus / Plus Query: 99 cccaccgacgcggagctgctccaggcgcagtccgacctgtggcgccacagcctctgctac 158 ||||| ||||| |||||||| ||||||||| |||||||||||||||||||||||| |||| Sbjct: 63 cccacggacgccgagctgctgcaggcgcaggccgacctgtggcgccacagcctctactac 122 Query: 159 ct 160 || Sbjct: 123 ct 124 Score = 60.0 bits (30), Expect = 9e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 444 cgccactacgtggaggcggccatgggcctggccgactggttcaggaagga 493 ||||||||||||||||| | |||| ||||||||||||||||| |||||| Sbjct: 408 cgccactacgtggaggccggcatgtccctggccgactggttcaagaagga 457 Score = 52.0 bits (26), Expect = 0.002 Identities = 65/78 (83%) Strand = Plus / Plus Query: 252 gccgccctgtccctgcccgcgtccaagctgccgttcctcgcccgcctgctgcgccagctc 311 ||||| ||||||||||| ||| ||||||| |||||||||| ||| || |||| | ||| Sbjct: 216 gccgcgctgtccctgccagcggccaagctcccgttcctcgggcgcgtgatgcggctgctg 275 Query: 312 gccacggcgggcgtcttc 329 | |||| ||||||||||| Sbjct: 276 gtcacgtcgggcgtcttc 293
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 58.0 bits (29), Expect = 4e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 180 tgcgccgtcgacctcggcgtccccacggccatccaccgcctcggcggcgccgc 232 ||||||| ||| |||||| ||||| | ||||||||||||| |||||||||||| Sbjct: 9845396 tgcgccgccgagctcggcatccccgccgccatccaccgccgcggcggcgccgc 9845344 Score = 54.0 bits (27), Expect = 6e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 174 ctccgctgcgccgtcgacctcggcgtccccacggccatccaccgcctcggcggcgccgc 232 ||||| ||||||| ||| ||||||||||||| ||||||||||||| || |||||||| Sbjct: 7318265 ctccggtgcgccgccgatctcggcgtccccagcgccatccaccgccggggaggcgccgc 7318207 Score = 44.1 bits (22), Expect = 0.53 Identities = 29/30 (96%), Gaps = 1/30 (3%) Strand = Plus / Minus Query: 207 gccatccaccgcctcggcg-gcgccgcgtc 235 ||||||||||||||||||| |||||||||| Sbjct: 25487667 gccatccaccgcctcggcgcgcgccgcgtc 25487638
>dbj|AP005822.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0456E06 Length = 164353 Score = 58.0 bits (29), Expect = 4e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 180 tgcgccgtcgacctcggcgtccccacggccatccaccgcctcggcggcgccgc 232 ||||||| ||| |||||| ||||| | ||||||||||||| |||||||||||| Sbjct: 135638 tgcgccgccgagctcggcatccccgccgccatccaccgccgcggcggcgccgc 135586
>dbj|AP005695.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0063H02 Length = 152326 Score = 58.0 bits (29), Expect = 4e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 180 tgcgccgtcgacctcggcgtccccacggccatccaccgcctcggcggcgccgc 232 ||||||| ||| |||||| ||||| | ||||||||||||| |||||||||||| Sbjct: 42031 tgcgccgccgagctcggcatccccgccgccatccaccgccgcggcggcgccgc 41979
>dbj|AP004862.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0001B11 Length = 166004 Score = 54.0 bits (27), Expect = 6e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 174 ctccgctgcgccgtcgacctcggcgtccccacggccatccaccgcctcggcggcgccgc 232 ||||| ||||||| ||| ||||||||||||| ||||||||||||| || |||||||| Sbjct: 24850 ctccggtgcgccgccgatctcggcgtccccagcgccatccaccgccggggaggcgccgc 24792
>dbj|AP004994.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0052G07 Length = 156207 Score = 54.0 bits (27), Expect = 6e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 174 ctccgctgcgccgtcgacctcggcgtccccacggccatccaccgcctcggcggcgccgc 232 ||||| ||||||| ||| ||||||||||||| ||||||||||||| || |||||||| Sbjct: 153269 ctccggtgcgccgccgatctcggcgtccccagcgccatccaccgccggggaggcgccgc 153211
>ref|NM_191262.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1137 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Plus Query: 166 ccatgtcgctccgctgcgccgtcgacctcggcgtccccacggccatccaccgcctcggcg 225 ||||||| ||||||||||||||||| |||||| |||| ||| ||||||||| |||| Sbjct: 92 ccatgtccctccgctgcgccgtcgagctcggcatccctgacgccgtccaccgccgtggcg 151 Query: 226 gcgccg 231 |||||| Sbjct: 152 gcgccg 157
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Plus Query: 166 ccatgtcgctccgctgcgccgtcgacctcggcgtccccacggccatccaccgcctcggcg 225 ||||||| ||||||||||||||||| |||||| |||| ||| ||||||||| |||| Sbjct: 31604087 ccatgtccctccgctgcgccgtcgagctcggcatccctgacgccgtccaccgccgtggcg 31604146 Query: 226 gcgccg 231 |||||| Sbjct: 31604147 gcgccg 31604152 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 386 cggcgtccgcatcgacggcg 405 |||||||||||||||||||| Sbjct: 12473536 cggcgtccgcatcgacggcg 12473555
>dbj|AP003268.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0503C12 Length = 147180 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Plus Query: 166 ccatgtcgctccgctgcgccgtcgacctcggcgtccccacggccatccaccgcctcggcg 225 ||||||| ||||||||||||||||| |||||| |||| ||| ||||||||| |||| Sbjct: 17819 ccatgtccctccgctgcgccgtcgagctcggcatccctgacgccgtccaccgccgtggcg 17878 Query: 226 gcgccg 231 |||||| Sbjct: 17879 gcgccg 17884
>dbj|AP003249.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0435B05 Length = 150997 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Plus Query: 166 ccatgtcgctccgctgcgccgtcgacctcggcgtccccacggccatccaccgcctcggcg 225 ||||||| ||||||||||||||||| |||||| |||| ||| ||||||||| |||| Sbjct: 117110 ccatgtccctccgctgcgccgtcgagctcggcatccctgacgccgtccaccgccgtggcg 117169 Query: 226 gcgccg 231 |||||| Sbjct: 117170 gcgccg 117175
>gb|AY103669.1| Zea mays PCO073521 mRNA sequence Length = 1503 Score = 50.1 bits (25), Expect = 0.009 Identities = 49/57 (85%) Strand = Plus / Plus Query: 276 aagctgccgttcctcgcccgcctgctgcgccagctcgccacggcgggcgtcttcacc 332 ||||||||||||||| |||||||||||| | |||||| || ||||||| |||||| Sbjct: 231 aagctgccgttcctccgccgcctgctgcggctcctcgccgcgtcgggcgtgttcacc 287
>gb|AF033496.1|AF033496 Zea mays herbicide safener binding protein (SBP1) mRNA, complete cds Length = 1438 Score = 50.1 bits (25), Expect = 0.009 Identities = 49/57 (85%) Strand = Plus / Plus Query: 276 aagctgccgttcctcgcccgcctgctgcgccagctcgccacggcgggcgtcttcacc 332 ||||||||||||||| |||||||||||| | |||||| || ||||||| |||||| Sbjct: 229 aagctgccgttcctccgccgcctgctgcggctcctcgccgcgtcgggcgtgttcacc 285
>gb|AC134925.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0041J17, complete sequence Length = 148829 Score = 46.1 bits (23), Expect = 0.14 Identities = 65/79 (82%) Strand = Plus / Minus Query: 154 gctacctcacgcccatgtcgctccgctgcgccgtcgacctcggcgtccccacggccatcc 213 ||||| ||| ||||||| ||||| |||||||| || |||||| ||||| || |||| Sbjct: 134307 gctacatcaagcccatggcgctcaagtgcgccgtggagctcggcatccccgacgcgatcc 134248 Query: 214 accgcctcggcggcgccgc 232 |||||| |||||||||||| Sbjct: 134247 accgccgcggcggcgccgc 134229
>gb|AC136481.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0007D07, complete sequence Length = 133930 Score = 46.1 bits (23), Expect = 0.14 Identities = 65/79 (82%) Strand = Plus / Minus Query: 154 gctacctcacgcccatgtcgctccgctgcgccgtcgacctcggcgtccccacggccatcc 213 ||||| ||| ||||||| ||||| |||||||| || |||||| ||||| || |||| Sbjct: 33927 gctacatcaagcccatggcgctcaagtgcgccgtggagctcggcatccccgacgcgatcc 33868 Query: 214 accgcctcggcggcgccgc 232 |||||| |||||||||||| Sbjct: 33867 accgccgcggcggcgccgc 33849
>emb|AL591985.1|RME591985 Sinorhizobium meliloti 1021 complete pSymB Length = 1683333 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 378 ctcgtggacggcgtccgcatcgacggc 404 |||||||||||||||||||||| |||| Sbjct: 749033 ctcgtggacggcgtccgcatcgccggc 749007
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 443 gcgccactacgtggaggcggcca 465 ||||||||||||||||||||||| Sbjct: 524470 gcgccactacgtggaggcggcca 524448 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 100 ccaccgacgcggagctgctc 119 |||||||||||||||||||| Sbjct: 4717181 ccaccgacgcggagctgctc 4717162
>gb|BT018658.1| Zea mays clone EL01N0508E09.d mRNA sequence Length = 1864 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 575 ggggatggaccagctcatccacgacg 600 |||||||||| ||||||||||||||| Sbjct: 16 ggggatggacaagctcatccacgacg 41
>gb|BT017349.1| Zea mays clone EL01N0323G05.c mRNA sequence Length = 773 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 214 accgcctcggcggcgccgcgtccccg 239 ||||||||||||||| |||||||||| Sbjct: 144 accgcctcggcggcggcgcgtccccg 169
>gb|AY658658.1| Synthetic construct Peudomonas aeruginosa clone FLH041495.01F PA2887 gene, partial cds Length = 879 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 391 tccgcatcgacggcgacgccagccag 416 ||||||||||||||| |||||||||| Sbjct: 746 tccgcatcgacggcgccgccagccag 771
>ref|XM_954507.1| Neurospora crassa OR74A hypothetical protein (NCU02418.1) partial mRNA Length = 1524 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 415 agacggccatcgtgcgcgccgc 436 |||||||||||||||||||||| Sbjct: 419 agacggccatcgtgcgcgccgc 398
>ref|XM_331193.1| Neurospora crassa OR74A hypothetical protein (NCU02418.1) partial mRNA Length = 1524 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 415 agacggccatcgtgcgcgccgc 436 |||||||||||||||||||||| Sbjct: 419 agacggccatcgtgcgcgccgc 398
>emb|BX052119.1|CNS09CDN Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC3AC10 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 800 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 504 gccgtgccctcgccgttcgagg 525 |||||||||||||||||||||| Sbjct: 544 gccgtgccctcgccgttcgagg 523
>gb|AE012128.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 36 of 460 of the complete genome Length = 10504 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Plus Query: 291 gcccgcctgctgcgccagctcg 312 |||||||||||||||||||||| Sbjct: 7929 gcccgcctgctgcgccagctcg 7950
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Plus Query: 291 gcccgcctgctgcgccagctcg 312 |||||||||||||||||||||| Sbjct: 394827 gcccgcctgctgcgccagctcg 394848 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 cctcgcccgcctgctgcgcc 306 |||||||||||||||||||| Sbjct: 2334300 cctcgcccgcctgctgcgcc 2334281
>gb|AE004715.1| Pseudomonas aeruginosa PAO1, section 276 of 529 of the complete genome Length = 10189 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 391 tccgcatcgacggcgacgccagccag 416 ||||||||||||||| |||||||||| Sbjct: 812 tccgcatcgacggcgccgccagccag 837
>gb|AY957390.1| Pseudomonas stutzeri NosL (nosL), NosY (nosY), and NosF (nosF) genes, complete cds; NosD-like (nosD) gene, complete sequence; and NosZ (nosZ) and NosR (nosR) genes, complete cds Length = 8000 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 392 ccgcatcgacggcgacgccagc 413 |||||||||||||||||||||| Sbjct: 3231 ccgcatcgacggcgacgccagc 3210
>dbj|AP003573.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0523F01 Length = 146419 Score = 44.1 bits (22), Expect = 0.53 Identities = 29/30 (96%), Gaps = 1/30 (3%) Strand = Plus / Minus Query: 207 gccatccaccgcctcggcg-gcgccgcgtc 235 ||||||||||||||||||| |||||||||| Sbjct: 5984 gccatccaccgcctcggcgcgcgccgcgtc 5955
>dbj|AP005386.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0019I19 Length = 164483 Score = 44.1 bits (22), Expect = 0.53 Identities = 29/30 (96%), Gaps = 1/30 (3%) Strand = Plus / Minus Query: 207 gccatccaccgcctcggcg-gcgccgcgtc 235 ||||||||||||||||||| |||||||||| Sbjct: 161676 gccatccaccgcctcggcgcgcgccgcgtc 161647
>emb|X67324.1|ZMFS18 Z.mays MFS18 mRNA Length = 969 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 214 accgcctcggcggcgccgcgtccccg 239 ||||||||||||||| |||||||||| Sbjct: 300 accgcctcggcggcggcgcgtccccg 325
>ref|XM_317180.2| Anopheles gambiae str. PEST ENSANGP00000018332 (ENSANGG00000015843), partial mRNA Length = 1431 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 504 gccgtgccctcgccgttcgagg 525 |||||||||||||||||||||| Sbjct: 335 gccgtgccctcgccgttcgagg 314
>dbj|AK058562.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-017-D11, full insert sequence Length = 1388 Score = 44.1 bits (22), Expect = 0.53 Identities = 29/30 (96%), Gaps = 1/30 (3%) Strand = Plus / Plus Query: 207 gccatccaccgcctcggcg-gcgccgcgtc 235 ||||||||||||||||||| |||||||||| Sbjct: 744 gccatccaccgcctcggcgcgcgccgcgtc 773
>gb|AY106835.1| Zea mays PCO070523 mRNA sequence Length = 727 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 214 accgcctcggcggcgccgcgtccccg 239 ||||||||||||||| |||||||||| Sbjct: 236 accgcctcggcggcggcgcgtccccg 261
>gb|AY104342.1| Zea mays PCO097811 mRNA sequence Length = 2116 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 575 ggggatggaccagctcatccacgacg 600 |||||||||| ||||||||||||||| Sbjct: 282 ggggatggacaagctcatccacgacg 307
>gb|AY103988.1| Zea mays PCO070524 mRNA sequence Length = 1061 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 214 accgcctcggcggcgccgcgtccccg 239 ||||||||||||||| |||||||||| Sbjct: 317 accgcctcggcggcggcgcgtccccg 342
>gb|AY714813.1| Cercopithecine herpesvirus 2, complete genome Length = 150715 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 420 gccatcgtgcgcgccgcggcc 440 ||||||||||||||||||||| Sbjct: 87028 gccatcgtgcgcgccgcggcc 87048
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 425 cgtgcgcgccgcggcctcgcg 445 ||||||||||||||||||||| Sbjct: 2082732 cgtgcgcgccgcggcctcgcg 2082712
>gb|AC108870.2| Oryza sativa (japonica cultivar-group) chromosome 11 PAC clone P0682E05, complete sequence Length = 162223 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 325 tcttcacctccaccgacgccg 345 ||||||||||||||||||||| Sbjct: 84005 tcttcacctccaccgacgccg 84025
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 423 atcgtgcgcgccgcggcctcg 443 ||||||||||||||||||||| Sbjct: 1237095 atcgtgcgcgccgcggcctcg 1237075
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 425 cgtgcgcgccgcggcctcgcg 445 ||||||||||||||||||||| Sbjct: 244327 cgtgcgcgccgcggcctcgcg 244307
>gb|AF533768.1| Cercopithecine herpesvirus 1 strain E2490, complete genome Length = 156789 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 420 gccatcgtgcgcgccgcggcc 440 ||||||||||||||||||||| Sbjct: 88234 gccatcgtgcgcgccgcggcc 88254
>gb|AC116603.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBb0015J03, complete sequence Length = 135940 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 325 tcttcacctccaccgacgccg 345 ||||||||||||||||||||| Sbjct: 77627 tcttcacctccaccgacgccg 77607
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 390 gtccgcatcgacggcgacgcc 410 ||||||||||||||||||||| Sbjct: 1314673 gtccgcatcgacggcgacgcc 1314693 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 390 gtccgcatcgacggcgacgcc 410 ||||||||||||||||||||| Sbjct: 1116418 gtccgcatcgacggcgacgcc 1116438
>ref|XM_699726.1| PREDICTED: Danio rerio hypothetical protein LOC558295 (LOC558295), partial mRNA Length = 1515 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 405 gacgccagccagacggccatc 425 ||||||||||||||||||||| Sbjct: 1051 gacgccagccagacggccatc 1031
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 425 cgtgcgcgccgcggcctcgcg 445 ||||||||||||||||||||| Sbjct: 2080677 cgtgcgcgccgcggcctcgcg 2080697
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 325 tcttcacctccaccgacgccg 345 ||||||||||||||||||||| Sbjct: 4214833 tcttcacctccaccgacgccg 4214853 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 529 tgcacggcgccgccatcttc 548 |||||||||||||||||||| Sbjct: 7209090 tgcacggcgccgccatcttc 7209071
>emb|BX545913.21| Zebrafish DNA sequence from clone DKEY-208P1 in linkage group 17, complete sequence Length = 188037 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 405 gacgccagccagacggccatc 425 ||||||||||||||||||||| Sbjct: 173603 gacgccagccagacggccatc 173583
>gb|DQ149153.1| Cercopithecine herpesvirus 16 strain X313, complete genome Length = 156487 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 420 gccatcgtgcgcgccgcggcc 440 ||||||||||||||||||||| Sbjct: 89034 gccatcgtgcgcgccgcggcc 89054
>dbj|AB096160.1| Cercopithecine herpesvirus 1 DNA, UL region, complete sequence Length = 106873 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 420 gccatcgtgcgcgccgcggcc 440 ||||||||||||||||||||| Sbjct: 79117 gccatcgtgcgcgccgcggcc 79137
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 390 gtccgcatcgacggcgacgcc 410 ||||||||||||||||||||| Sbjct: 1338232 gtccgcatcgacggcgacgcc 1338252 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 390 gtccgcatcgacggcgacgcc 410 ||||||||||||||||||||| Sbjct: 1149951 gtccgcatcgacggcgacgcc 1149971
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 325 tcttcacctccaccgacgccg 345 ||||||||||||||||||||| Sbjct: 4215654 tcttcacctccaccgacgccg 4215674 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 529 tgcacggcgccgccatcttc 548 |||||||||||||||||||| Sbjct: 7212386 tgcacggcgccgccatcttc 7212367
>ref|NM_195472.1| Oryza sativa (japonica cultivar-group) putative gag-pol polyprotein (OJ1004_F02.14), mRNA Length = 4017 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 529 tgcacggcgccgccatcttc 548 |||||||||||||||||||| Sbjct: 1460 tgcacggcgccgccatcttc 1479
>ref|XM_467235.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1490 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 521 cgaggacgtgcacggcgccg 540 |||||||||||||||||||| Sbjct: 915 cgaggacgtgcacggcgccg 896
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence Length = 3587082 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 301 tgcgccagctcgccacggcg 320 |||||||||||||||||||| Sbjct: 1923427 tgcgccagctcgccacggcg 1923446
>ref|XM_469628.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1959 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 529 tgcacggcgccgccatcttc 548 |||||||||||||||||||| Sbjct: 1076 tgcacggcgccgccatcttc 1095
>ref|XM_479432.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1032 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 420 gccatcgtgcgcgccgcggc 439 |||||||||||||||||||| Sbjct: 590 gccatcgtgcgcgccgcggc 609
>ref|XM_479431.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1160 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 420 gccatcgtgcgcgccgcggc 439 |||||||||||||||||||| Sbjct: 690 gccatcgtgcgcgccgcggc 709
>gb|AC092387.6| Oryza sativa (japonica cultivar-group) chromosome 10 clone OJ1004_F02 map C8, complete sequence Length = 116304 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 529 tgcacggcgccgccatcttc 548 |||||||||||||||||||| Sbjct: 65708 tgcacggcgccgccatcttc 65689
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 386 cggcgtccgcatcgacggcg 405 |||||||||||||||||||| Sbjct: 1535615 cggcgtccgcatcgacggcg 1535634
>ref|XM_598392.2| PREDICTED: Bos taurus similar to homeodomain interacting protein kinase 4 (LOC520157), mRNA Length = 2155 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 455 ggaggcggccatgggcctgg 474 |||||||||||||||||||| Sbjct: 1197 ggaggcggccatgggcctgg 1216
>ref|XM_585828.2| PREDICTED: Bos taurus hypothetical LOC508965 (LOC508965), mRNA Length = 1491 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 284 gttcctcgcccgcctgctgc 303 |||||||||||||||||||| Sbjct: 488 gttcctcgcccgcctgctgc 469
>gb|AC144700.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0017H17, complete sequence Length = 156331 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 587 gctcatccacgacgccgtcg 606 |||||||||||||||||||| Sbjct: 93853 gctcatccacgacgccgtcg 93872
>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome Length = 6397126 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 316 cggcgggcgtcttcacctccaccg 339 |||| ||||||||||||||||||| Sbjct: 1856099 cggctggcgtcttcacctccaccg 1856076
>gb|BC116031.1| Bos taurus cDNA clone MGC:139028 IMAGE:8095211, complete cds Length = 1816 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 284 gttcctcgcccgcctgctgc 303 |||||||||||||||||||| Sbjct: 518 gttcctcgcccgcctgctgc 499
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 529 tgcacggcgccgccatcttc 548 |||||||||||||||||||| Sbjct: 29871758 tgcacggcgccgccatcttc 29871739
>gb|AY387483.1| Oryza sativa (japonica cultivar-group) BAC OSJNBa0084L17, complete sequence Length = 159661 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 529 tgcacggcgccgccatcttc 548 |||||||||||||||||||| Sbjct: 138848 tgcacggcgccgccatcttc 138867
>gb|AC106128.6| Rattus norvegicus 1 BAC CH230-149H17 (Children's Hospital Oakland Research Institute) complete sequence Length = 210385 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 458 ggcggccatgggcctggccg 477 |||||||||||||||||||| Sbjct: 204862 ggcggccatgggcctggccg 204843
>emb|BX640437.1| Bordetella bronchiseptica strain RB50, complete genome; segment 1/16 Length = 347356 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 290 cgcccgcctgctgcgccagctcgc 313 ||||||||||| |||||||||||| Sbjct: 68226 cgcccgcctgcggcgccagctcgc 68203
>emb|BX640423.1| Bordetella parapertussis strain 12822, complete genome; segment 1/14 Length = 348251 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 290 cgcccgcctgctgcgccagctcgc 313 ||||||||||| |||||||||||| Sbjct: 68215 cgcccgcctgcggcgccagctcgc 68192
>emb|BX640422.1| Bordetella pertussis strain Tohama I, complete genome; segment 12/12 Length = 257701 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 290 cgcccgcctgctgcgccagctcgc 313 ||||||||||| |||||||||||| Sbjct: 35896 cgcccgcctgcggcgccagctcgc 35873
>dbj|AK061856.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-G03, full insert sequence Length = 1032 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 420 gccatcgtgcgcgccgcggc 439 |||||||||||||||||||| Sbjct: 590 gccatcgtgcgcgccgcggc 609
>gb|AE012325.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 233 of 460 of the complete genome Length = 11015 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 287 cctcgcccgcctgctgcgcc 306 |||||||||||||||||||| Sbjct: 9317 cctcgcccgcctgctgcgcc 9336
>gb|AC092172.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0014J14, complete sequence Length = 191397 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 529 tgcacggcgccgccatcttc 548 |||||||||||||||||||| Sbjct: 34448 tgcacggcgccgccatcttc 34429
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 248 ggtcgccgccctgtccctgcccgc 271 ||||||||||||||| |||||||| Sbjct: 3933372 ggtcgccgccctgtcgctgcccgc 3933349
>ref|XM_944210.1| PREDICTED: Homo sapiens hypothetical LOC90024 (FLJ20021), mRNA Length = 919 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 284 gttcctcgcccgcctgctgcgcca 307 |||||| ||||||||||||||||| Sbjct: 749 gttcctggcccgcctgctgcgcca 772
>ref|XM_028217.4| PREDICTED: Homo sapiens hypothetical LOC90024 (FLJ20021), mRNA Length = 919 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 284 gttcctcgcccgcctgctgcgcca 307 |||||| ||||||||||||||||| Sbjct: 749 gttcctggcccgcctgctgcgcca 772
>gb|AE016814.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome I, complete sequence Length = 691920 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 291 gcccgcctgctgcgccagct 310 |||||||||||||||||||| Sbjct: 222396 gcccgcctgctgcgccagct 222415
>gb|AC118133.4| Oryza sativa chromosome 3 BAC OSJNBb0016H12 genomic sequence, complete sequence Length = 139946 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 529 tgcacggcgccgccatcttc 548 |||||||||||||||||||| Sbjct: 37699 tgcacggcgccgccatcttc 37680
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 420 gccatcgtgcgcgccgcggc 439 |||||||||||||||||||| Sbjct: 27952150 gccatcgtgcgcgccgcggc 27952169 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 420 gccatcgtgcgcgccgcggc 439 |||||||||||||||||||| Sbjct: 27949941 gccatcgtgcgcgccgcggc 27949960
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 529 tgcacggcgccgccatcttc 548 |||||||||||||||||||| Sbjct: 29963180 tgcacggcgccgccatcttc 29963161
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 521 cgaggacgtgcacggcgccg 540 |||||||||||||||||||| Sbjct: 28371459 cgaggacgtgcacggcgccg 28371440
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 379 tcgtggacggcgtccgcatcgacg 402 ||||||||||||||||| |||||| Sbjct: 8571430 tcgtggacggcgtccgcctcgacg 8571407 Score = 40.1 bits (20), Expect = 8.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 309 ctcgccacggcgggcgtcttcacctcca 336 |||||| | ||||||||||||||||||| Sbjct: 8081005 ctcgccgccgcgggcgtcttcacctcca 8081032 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 182 cgccgtcgacctcggcgtcc 201 |||||||||||||||||||| Sbjct: 372850 cgccgtcgacctcggcgtcc 372869
>gb|AY204470.1| Myxococcus xanthus clone C1255 adventurous gliding motility protein J (agmJ) gene, complete cds Length = 2085 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 233 gtccccgtccgaactggtcgccgc 256 ||||||| |||||||||||||||| Sbjct: 1240 gtccccggccgaactggtcgccgc 1217
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 511 cctcgccgttcgaggacgtg 530 |||||||||||||||||||| Sbjct: 2517796 cctcgccgttcgaggacgtg 2517815 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 103 ccgacgcggagctgctccaggcgc 126 |||||||||||| ||||||||||| Sbjct: 1355696 ccgacgcggagcagctccaggcgc 1355719
>dbj|AP005452.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0453E03 Length = 159980 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 420 gccatcgtgcgcgccgcggc 439 |||||||||||||||||||| Sbjct: 115508 gccatcgtgcgcgccgcggc 115527 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 420 gccatcgtgcgcgccgcggc 439 |||||||||||||||||||| Sbjct: 113299 gccatcgtgcgcgccgcggc 113318
>dbj|AP003825.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1343_D04 Length = 143407 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 420 gccatcgtgcgcgccgcggc 439 |||||||||||||||||||| Sbjct: 41484 gccatcgtgcgcgccgcggc 41503 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 420 gccatcgtgcgcgccgcggc 439 |||||||||||||||||||| Sbjct: 39275 gccatcgtgcgcgccgcggc 39294
>dbj|AP004358.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1135C02 Length = 152306 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 386 cggcgtccgcatcgacggcg 405 |||||||||||||||||||| Sbjct: 59151 cggcgtccgcatcgacggcg 59170
>dbj|AP004096.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1743_B12 Length = 175645 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 521 cgaggacgtgcacggcgccg 540 |||||||||||||||||||| Sbjct: 163216 cgaggacgtgcacggcgccg 163197
>dbj|AK000028.1| Homo sapiens cDNA FLJ20021 fis, clone ADSE01233 Length = 806 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 284 gttcctcgcccgcctgctgcgcca 307 |||||| ||||||||||||||||| Sbjct: 617 gttcctggcccgcctgctgcgcca 640
>dbj|AK110831.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-172-A04, full insert sequence Length = 1489 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 521 cgaggacgtgcacggcgccg 540 |||||||||||||||||||| Sbjct: 915 cgaggacgtgcacggcgccg 896
>dbj|AK107619.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-131-D02, full insert sequence Length = 1581 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 420 gccatcgtgcgcgccgcggc 439 |||||||||||||||||||| Sbjct: 689 gccatcgtgcgcgccgcggc 708
>dbj|AK104614.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-E02, full insert sequence Length = 1159 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 420 gccatcgtgcgcgccgcggc 439 |||||||||||||||||||| Sbjct: 689 gccatcgtgcgcgccgcggc 708
>dbj|AK070585.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023062B22, full insert sequence Length = 1159 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 420 gccatcgtgcgcgccgcggc 439 |||||||||||||||||||| Sbjct: 690 gccatcgtgcgcgccgcggc 709
>ref|NM_207823.1| Eremothecium gossypii AAL072Cp (AAL072C), mRNA Length = 3663 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 291 gcccgcctgctgcgccagct 310 |||||||||||||||||||| Sbjct: 225 gcccgcctgctgcgccagct 206
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 295 gcctgctgcgccagctcgcc 314 |||||||||||||||||||| Sbjct: 3010826 gcctgctgcgccagctcgcc 3010845
>emb|CT025832.1| Acinetobacter baumannii str. AYE. Genomics of Multi-Drug Resistance in Acinetobacter baumannii Length = 100001 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 565 tcctcgacccggggatggaccagc 588 ||||||| |||||||||||||||| Sbjct: 27411 tcctcgatccggggatggaccagc 27434
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 289 tcgcccgcctgctgcgccagctcg 312 ||||| |||||||||||||||||| Sbjct: 1196482 tcgccagcctgctgcgccagctcg 1196505
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 443 gcgccactacgtggaggcggccat 466 ||||||| |||||||||||||||| Sbjct: 3438178 gcgccacgacgtggaggcggccat 3438155
>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome Length = 2595221 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 390 gtccgcatcgacggcgacgc 409 |||||||||||||||||||| Sbjct: 1010676 gtccgcatcgacggcgacgc 1010695
>dbj|AP001816.2| Homo sapiens genomic DNA, chromosome 4q22-q24, clone:563D14, complete sequence Length = 123323 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 284 gttcctcgcccgcctgctgcgcca 307 |||||| ||||||||||||||||| Sbjct: 111070 gttcctggcccgcctgctgcgcca 111093 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,246,376 Number of Sequences: 3902068 Number of extensions: 3246376 Number of successful extensions: 81575 Number of sequences better than 10.0: 111 Number of HSP's better than 10.0 without gapping: 120 Number of HSP's successfully gapped in prelim test: 4 Number of HSP's that attempted gapping in prelim test: 75391 Number of HSP's gapped (non-prelim): 6175 length of query: 613 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 590 effective length of database: 17,143,297,704 effective search space: 10114545645360 effective search space used: 10114545645360 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
