ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart44h01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_473674.1| Oryza sativa (japonica cultivar-group), predic... 208 1e-50
2dbj|AK106073.1| Oryza sativa (japonica cultivar-group) cDNA clon... 208 1e-50
3emb|AL662957.2|OSJN00157 Oryza sativa genomic DNA, chromosome 4,... 111 3e-21
4dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 111 3e-21
5emb|AL359920.15| Human DNA sequence from clone RP11-359P14 on ch... 48 0.032
6gb|AE005134.1| Halobacterium sp. NRC-1 section 165 of 170 of the... 46 0.13
7gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 44 0.50
8gb|AC148339.1| Oryza sativa (japonica cultivar-group) chromosome... 44 0.50
9gb|AC135597.5| Oryza sativa chromosome 3 BAC OSJNBa0034E08 genom... 44 0.50
10gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, compl... 44 0.50
11gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete g... 44 0.50
12dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.50
13dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.50
14dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.50
15dbj|AP001389.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.50
16dbj|AP002837.2| Oryza sativa (japonica cultivar-group) genomic D... 44 0.50
17gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 44 0.50
18emb|AL713908.3|CNS07YQ8 Oryza sativa chromosome 12, . BAC OSJNBa... 44 0.50
19ref|XM_482082.1| Oryza sativa (japonica cultivar-group), mRNA 42 2.0
20ref|XM_960424.1| Neurospora crassa OR74A hypothetical protein (N... 42 2.0
21gb|AY658737.1| Synthetic construct Peudomonas aeruginosa clone F... 42 2.0
22ref|XM_329075.1| Neurospora crassa OR74A hypothetical protein (N... 42 2.0
23emb|BX927148.1| Corynebacterium glutamicum ATCC 13032, IS finger... 42 2.0
24emb|AL114690.1|CNS01BU2 Botrytis cinerea strain T4 cDNA library 42 2.0
25dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.0
26dbj|BA000036.3| Corynebacterium glutamicum ATCC 13032 DNA, compl... 42 2.0
27gb|AE004855.1| Pseudomonas aeruginosa PAO1, section 416 of 529 o... 42 2.0
28dbj|AP004397.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.0
29dbj|AP003962.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.0
30dbj|AK072348.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.0
31gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, com... 42 2.0
32emb|AL928712.8| Zebrafish DNA sequence from clone CH211-220O11 i... 42 2.0
33ref|NM_187909.1| Oryza sativa (japonica cultivar-group), Ozsa835... 40 7.8
34ref|XM_466677.1| Oryza sativa (japonica cultivar-group), mRNA 40 7.8
35gb|AF500227.1| Neurospora crassa RIP defective (rid) gene, compl... 40 7.8
36gb|AC116368.3| Oryza sativa (japonica cultivar-group) chromosome... 40 7.8
37gb|AC135258.2| Oryza sativa (japonica cultivar-group) chromosome... 40 7.8
38gb|AC147811.2| Oryza sativa (japonica cultivar-group) chromosome... 40 7.8
39gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete ... 40 7.8
40ref|XM_362120.1| Magnaporthe grisea 70-15 hypothetical protein (... 40 7.8
41ref|XM_613176.2| PREDICTED: Bos taurus calcium channel, voltage-... 40 7.8
42ref|XM_959563.1| Neurospora crassa OR74A hypothetical protein ( ... 40 7.8
43ref|XM_329223.1| Neurospora crassa OR74A hypothetical protein ( ... 40 7.8
44ref|NM_001001622.1| Sus scrofa chemokine C motif receptor 1 (XCR... 40 7.8
45ref|XM_389610.1| Gibberella zeae PH-1 chromosome 4 hypothetical ... 40 7.8
46ref|XM_536278.2| PREDICTED: Canis familiaris similar to chromoso... 40 7.8
47emb|AL939120.1|SCO939120 Streptomyces coelicolor A3(2) complete ... 40 7.8
48emb|AL442164.1|NCB2J23 Neurospora crassa DNA linkage group I BAC... 40 7.8
49dbj|AP000570.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.8
50gb|AC148714.1| Macaca mulatta Major Histocompatibility Complex B... 40 7.8
51dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.8
52dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.8
53dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.8
54dbj|AP006436.1| Sus scrofa CC chemokine receptor genes(CCR3, CCR... 40 7.8
55dbj|AB119267.1| Sus scrofa XCR1 mRNA for chemokine C motif recep... 40 7.8
56dbj|AB119266.1| Sus scrofa XCR1 mRNA for chemokine C motif recep... 40 7.8
57dbj|AB119265.1| Sus scrofa XCR1 mRNA for chemokine C motif recep... 40 7.8
58dbj|AP000492.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.8
59dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 40 7.8
60dbj|AP003458.4| Oryza sativa (japonica cultivar-group) genomic D... 40 7.8
61dbj|AP003525.2| Oryza sativa (japonica cultivar-group) genomic D... 40 7.8
62dbj|AP005648.2| Oryza sativa (japonica cultivar-group) genomic D... 40 7.8
63dbj|AP005286.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.8
64dbj|AP004063.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.8
65emb|X55888.1|GDTRNAPR Chicken tRNA-Pro(AGG) and tRNA-Pro(CGG) genes 40 7.8
66dbj|AK101310.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.8
67gb|AY664419.1| Zea mays cultivar Mo17 locus 9009, complete sequence 40 7.8
68gb|AY664415.1| Zea mays cultivar B73 locus 9009, complete sequence 40 7.8
69gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 7.8
70emb|AL731751.4|CNS08C80 Oryza sativa chromosome 12, . BAC OJ1510... 40 7.8
71emb|AL713950.4|CNS07YPT Oryza sativa chromosome 12, . BAC OJ1004... 40 7.8
72gb|AF010496.1|AF010496 Rhodobacter capsulatus strain SB1003, par... 40 7.8 
>ref|XM_473674.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 723

 Score =  208 bits (105), Expect = 1e-50
 Identities = 228/269 (84%)
 Strand = Plus / Plus

                                                                       
Query: 282 gaggacgacggggagttcggcgcgacggacacgaggatgggcgtgatggccatcatctcc 341
           ||||| || |||||||| |||||||||||||||||||||||||| ||||  |||||||||
Sbjct: 229 gaggaggaaggggagtttggcgcgacggacacgaggatgggcgtcatggggatcatctcc 288

                                                                       
Query: 342 ttcctgccttacttcaactggctgagctgggtcttcgcgtggctcgacagcggcaggaag 401
           || ||||||||||||||||||||||||||| ||||||||||||| |||||||| | |  |
Sbjct: 289 ttgctgccttacttcaactggctgagctggatcttcgcgtggctggacagcgggaagcgg 348

                                                                       
Query: 402 ctgtatctgctctacgccgccgtctatttggctccttaccttagaacgaacttatcgctc 461
           |  |||||| |||||||||| |  || ||||||||||| || ||||| || ||||| || 
Sbjct: 349 cgttatctgttctacgccgctgcatacttggctccttatctgagaacaaatttatcactg 408

                                                                       
Query: 462 tcccctgatgagagctggttgcctattgcgagcatcttcatctgcatcttacatgttcag 521
           || || || ||||||||||| ||||| || ||||||||   ||||||  | |||||||||
Sbjct: 409 tcgcccgaagagagctggttacctatagctagcatctttgcctgcattctccatgttcag 468

                                        
Query: 522 ctagaagcaggcatcaggaatggtgatat 550
           ||||| ||| ||||||||| |||||||||
Sbjct: 469 ctagaggcaagcatcaggactggtgatat 497



 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 72/81 (88%)
 Strand = Plus / Plus

                                                                       
Query: 168 gcctgccgcgcggagctgcagcaggacgcgccgttcgtcgccgccatcggcgcctgcgtg 227
           |||||||| || || |||||||||||||||||||||| ||||||||||||||||||| ||
Sbjct: 121 gcctgccgggctgacctgcagcaggacgcgccgttcgccgccgccatcggcgcctgcttg 180

                                
Query: 228 ttcgcgtccctcgcgctcccg 248
            | || ||||||| |||||||
Sbjct: 181 ctagcctccctcgtgctcccg 201
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>dbj|AK106073.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-206-H09, full
           insert sequence
          Length = 1099

 Score =  208 bits (105), Expect = 1e-50
 Identities = 228/269 (84%)
 Strand = Plus / Plus

                                                                       
Query: 282 gaggacgacggggagttcggcgcgacggacacgaggatgggcgtgatggccatcatctcc 341
           ||||| || |||||||| |||||||||||||||||||||||||| ||||  |||||||||
Sbjct: 281 gaggaggaaggggagtttggcgcgacggacacgaggatgggcgtcatggggatcatctcc 340

                                                                       
Query: 342 ttcctgccttacttcaactggctgagctgggtcttcgcgtggctcgacagcggcaggaag 401
           || ||||||||||||||||||||||||||| ||||||||||||| |||||||| | |  |
Sbjct: 341 ttgctgccttacttcaactggctgagctggatcttcgcgtggctggacagcgggaagcgg 400

                                                                       
Query: 402 ctgtatctgctctacgccgccgtctatttggctccttaccttagaacgaacttatcgctc 461
           |  |||||| |||||||||| |  || ||||||||||| || ||||| || ||||| || 
Sbjct: 401 cgttatctgttctacgccgctgcatacttggctccttatctgagaacaaatttatcactg 460

                                                                       
Query: 462 tcccctgatgagagctggttgcctattgcgagcatcttcatctgcatcttacatgttcag 521
           || || || ||||||||||| ||||| || ||||||||   ||||||  | |||||||||
Sbjct: 461 tcgcccgaagagagctggttacctatagctagcatctttgcctgcattctccatgttcag 520

                                        
Query: 522 ctagaagcaggcatcaggaatggtgatat 550
           ||||| ||| ||||||||| |||||||||
Sbjct: 521 ctagaggcaagcatcaggactggtgatat 549



 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 72/81 (88%)
 Strand = Plus / Plus

                                                                       
Query: 168 gcctgccgcgcggagctgcagcaggacgcgccgttcgtcgccgccatcggcgcctgcgtg 227
           |||||||| || || |||||||||||||||||||||| ||||||||||||||||||| ||
Sbjct: 173 gcctgccgggctgacctgcagcaggacgcgccgttcgccgccgccatcggcgcctgcttg 232

                                
Query: 228 ttcgcgtccctcgcgctcccg 248
            | || ||||||| |||||||
Sbjct: 233 ctagcctccctcgtgctcccg 253
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>emb|AL662957.2|OSJN00157 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0013K16,
             complete sequence
          Length = 145739

 Score =  111 bits (56), Expect = 3e-21
 Identities = 77/84 (91%)
 Strand = Plus / Minus

                                                                         
Query: 282   gaggacgacggggagttcggcgcgacggacacgaggatgggcgtgatggccatcatctcc 341
             ||||| || |||||||| |||||||||||||||||||||||||| ||||  |||||||||
Sbjct: 61265 gaggaggaaggggagtttggcgcgacggacacgaggatgggcgtcatggggatcatctcc 61206

                                     
Query: 342   ttcctgccttacttcaactggctg 365
             || |||||||||||||||||||||
Sbjct: 61205 ttgctgccttacttcaactggctg 61182



 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 72/81 (88%)
 Strand = Plus / Minus

                                                                         
Query: 168   gcctgccgcgcggagctgcagcaggacgcgccgttcgtcgccgccatcggcgcctgcgtg 227
             |||||||| || || |||||||||||||||||||||| ||||||||||||||||||| ||
Sbjct: 61373 gcctgccgggctgacctgcagcaggacgcgccgttcgccgccgccatcggcgcctgcttg 61314

                                  
Query: 228   ttcgcgtccctcgcgctcccg 248
              | || ||||||| |||||||
Sbjct: 61313 ctagcctccctcgtgctcccg 61293



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 62/75 (82%)
 Strand = Plus / Minus

                                                                         
Query: 365   gagctgggtcttcgcgtggctcgacagcggcaggaagctgtatctgctctacgccgccgt 424
             ||||||| ||||||||||||| |||||||| | |  ||  |||||| |||||||||| | 
Sbjct: 61090 gagctggatcttcgcgtggctggacagcgggaagcggcgttatctgttctacgccgctgc 61031

                            
Query: 425   ctatttggctcctta 439
              || |||||||||||
Sbjct: 61030 atacttggctcctta 61016
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  111 bits (56), Expect = 3e-21
 Identities = 77/84 (91%)
 Strand = Plus / Minus

                                                                            
Query: 282      gaggacgacggggagttcggcgcgacggacacgaggatgggcgtgatggccatcatctcc 341
                ||||| || |||||||| |||||||||||||||||||||||||| ||||  |||||||||
Sbjct: 29558576 gaggaggaaggggagtttggcgcgacggacacgaggatgggcgtcatggggatcatctcc 29558517

                                        
Query: 342      ttcctgccttacttcaactggctg 365
                || |||||||||||||||||||||
Sbjct: 29558516 ttgctgccttacttcaactggctg 29558493



 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 72/81 (88%)
 Strand = Plus / Minus

                                                                            
Query: 168      gcctgccgcgcggagctgcagcaggacgcgccgttcgtcgccgccatcggcgcctgcgtg 227
                |||||||| || || |||||||||||||||||||||| ||||||||||||||||||| ||
Sbjct: 29558684 gcctgccgggctgacctgcagcaggacgcgccgttcgccgccgccatcggcgcctgcttg 29558625

                                     
Query: 228      ttcgcgtccctcgcgctcccg 248
                 | || ||||||| |||||||
Sbjct: 29558624 ctagcctccctcgtgctcccg 29558604



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 62/75 (82%)
 Strand = Plus / Minus

                                                                            
Query: 365      gagctgggtcttcgcgtggctcgacagcggcaggaagctgtatctgctctacgccgccgt 424
                ||||||| ||||||||||||| |||||||| | |  ||  |||||| |||||||||| | 
Sbjct: 29558401 gagctggatcttcgcgtggctggacagcgggaagcggcgttatctgttctacgccgctgc 29558342

                               
Query: 425      ctatttggctcctta 439
                 || |||||||||||
Sbjct: 29558341 atacttggctcctta 29558327
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>emb|AL359920.15| Human DNA sequence from clone RP11-359P14 on chromosome 13 Contains a
              novel gene and a TAR DNA binding protein (TARDBP)
              pseudogene, the 5' UTR of a novel gene (FLJ21007) and 2 CpG
              islands, complete sequence
          Length = 226860

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                      
Query: 138    cacccgcggcccggcagccggcgg 161
              ||||||||||||||||||||||||
Sbjct: 207515 cacccgcggcccggcagccggcgg 207492
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>gb|AE005134.1| Halobacterium sp. NRC-1 section 165 of 170 of the complete genome
          Length = 11093

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 293   ggagttcggcgcgacggacacga 315
             |||||||||||||||||||||||
Sbjct: 10604 ggagttcggcgcgacggacacga 10626
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 275      ggatgaggaggacgacggggag 296
                ||||||||||||||||||||||
Sbjct: 19003253 ggatgaggaggacgacggggag 19003274



 Score = 44.1 bits (22), Expect = 0.50
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                              
Query: 257      ggtcagaggagaggcggcggatgaggagga 286
                |||| ||||||||| |||||||||||||||
Sbjct: 12784020 ggtcggaggagaggaggcggatgaggagga 12783991
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>gb|AC148339.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone B1339A06,
             complete sequence
          Length = 132243

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                           
Query: 257   ggtcagaggagaggcggcggatgaggagga 286
             |||| ||||||||| |||||||||||||||
Sbjct: 22236 ggtcggaggagaggaggcggatgaggagga 22207
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>gb|AC135597.5| Oryza sativa chromosome 3 BAC OSJNBa0034E08 genomic sequence, complete
              sequence
          Length = 171437

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 275    ggatgaggaggacgacggggag 296
              ||||||||||||||||||||||
Sbjct: 154324 ggatgaggaggacgacggggag 154303
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>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence
          Length = 4895836

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 195     gcgccgttcgtcgccgccatcggcgc 220
               ||||| ||||||||||||||||||||
Sbjct: 1417167 gcgcccttcgtcgccgccatcggcgc 1417142
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>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome
          Length = 2909809

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 191    ggacgcgccgttcgtcgccgcc 212
              ||||||||||||||||||||||
Sbjct: 546109 ggacgcgccgttcgtcgccgcc 546130
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                              
Query: 267      gaggcggcggatgaggaggacgacggggag 296
                |||||||||||||||||||| || ||||||
Sbjct: 23317650 gaggcggcggatgaggaggaggagggggag 23317621



 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 494      catcttcatctgcatcttac 513
                ||||||||||||||||||||
Sbjct: 21142013 catcttcatctgcatcttac 21141994



 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 494      catcttcatctgcatcttac 513
                ||||||||||||||||||||
Sbjct: 19274470 catcttcatctgcatcttac 19274451
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6,
              complete sequence
          Length = 30731886

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                                
Query: 192    gacgcgccgttcgtcgccgccatcggcgcctgcg 225
              |||||| |||||||||||||| ||||||| ||||
Sbjct: 827297 gacgcgacgttcgtcgccgccctcggcgcgtgcg 827330



 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 270     gcggcggatgaggaggacgacggg 293
               ||||||||||||||||| ||||||
Sbjct: 5843863 gcggcggatgaggaggatgacggg 5843840
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 275      ggatgaggaggacgacggggag 296
                ||||||||||||||||||||||
Sbjct: 18997294 ggatgaggaggacgacggggag 18997315



 Score = 44.1 bits (22), Expect = 0.50
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                              
Query: 257      ggtcagaggagaggcggcggatgaggagga 286
                |||| ||||||||| |||||||||||||||
Sbjct: 12780783 ggtcggaggagaggaggcggatgaggagga 12780754
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>dbj|AP001389.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0541H01
          Length = 157519

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                                
Query: 192    gacgcgccgttcgtcgccgccatcggcgcctgcg 225
              |||||| |||||||||||||| ||||||| ||||
Sbjct: 110431 gacgcgacgttcgtcgccgccctcggcgcgtgcg 110464
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>dbj|AP002837.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
            clone:OSJNBa0019F11
          Length = 123673

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                              
Query: 192  gacgcgccgttcgtcgccgccatcggcgcctgcg 225
            |||||| |||||||||||||| ||||||| ||||
Sbjct: 8192 gacgcgacgttcgtcgccgccctcggcgcgtgcg 8225
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                              
Query: 267      gaggcggcggatgaggaggacgacggggag 296
                |||||||||||||||||||| || ||||||
Sbjct: 23245841 gaggcggcggatgaggaggaggagggggag 23245812



 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 494      catcttcatctgcatcttac 513
                ||||||||||||||||||||
Sbjct: 21068222 catcttcatctgcatcttac 21068203



 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 494      catcttcatctgcatcttac 513
                ||||||||||||||||||||
Sbjct: 19200697 catcttcatctgcatcttac 19200678
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>emb|AL713908.3|CNS07YQ8 Oryza sativa chromosome 12, . BAC OSJNBa0011B18 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 168063

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                            
Query: 267    gaggcggcggatgaggaggacgacggggag 296
              |||||||||||||||||||| || ||||||
Sbjct: 130768 gaggcggcggatgaggaggaggagggggag 130739
to top
>ref|XM_482082.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3262

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 269 ggcggcggatgaggaggacgacggg 293
           ||||||||| |||||||||||||||
Sbjct: 258 ggcggcggaggaggaggacgacggg 234
to top
>ref|XM_960424.1| Neurospora crassa OR74A hypothetical protein (NCU01886.1) partial
           mRNA
          Length = 2424

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 264 ggagaggcggcggatgaggag 284
           |||||||||||||||||||||
Sbjct: 998 ggagaggcggcggatgaggag 978
to top
>gb|AY658737.1| Synthetic construct Peudomonas aeruginosa clone FLH034612.01F
           PA4394 gene, partial cds
          Length = 837

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 201 ttcgtcgccgccatcggcgcc 221
           |||||||||||||||||||||
Sbjct: 271 ttcgtcgccgccatcggcgcc 291
to top
>ref|XM_329075.1| Neurospora crassa OR74A hypothetical protein (NCU01886.1) partial
           mRNA
          Length = 2424

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 264 ggagaggcggcggatgaggag 284
           |||||||||||||||||||||
Sbjct: 998 ggagaggcggcggatgaggag 978
to top
>emb|BX927148.1| Corynebacterium glutamicum ATCC 13032, IS fingerprint type 4-5, complete
              genome; segment 1/10
          Length = 348071

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 267    gaggcggcggatgaggaggac 287
              |||||||||||||||||||||
Sbjct: 168159 gaggcggcggatgaggaggac 168179
to top
>emb|AL114690.1|CNS01BU2 Botrytis cinerea strain T4 cDNA library
          Length = 660

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 286 acgacggggagttcggcgcga 306
           |||||||||||||||||||||
Sbjct: 236 acgacggggagttcggcgcga 216
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 269      ggcggcggatgaggaggacgacggg 293
                ||||||||| |||||||||||||||
Sbjct: 17646389 ggcggcggaggaggaggacgacggg 17646413
to top
>dbj|BA000036.3| Corynebacterium glutamicum ATCC 13032 DNA, complete genome
          Length = 3309401

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 267    gaggcggcggatgaggaggac 287
              |||||||||||||||||||||
Sbjct: 168158 gaggcggcggatgaggaggac 168178
to top
>gb|AE004855.1| Pseudomonas aeruginosa PAO1, section 416 of 529 of the complete
            genome
          Length = 11578

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 201  ttcgtcgccgccatcggcgcc 221
            |||||||||||||||||||||
Sbjct: 3920 ttcgtcgccgccatcggcgcc 3900
to top
>dbj|AP004397.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0436B06
          Length = 148947

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 269    ggcggcggatgaggaggacgacggg 293
              ||||||||| |||||||||||||||
Sbjct: 123039 ggcggcggaggaggaggacgacggg 123063
to top
>dbj|AP003962.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1705_C03
          Length = 118339

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 269   ggcggcggatgaggaggacgacggg 293
             ||||||||| |||||||||||||||
Sbjct: 31778 ggcggcggaggaggaggacgacggg 31802
to top
>dbj|AK072348.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023050N03, full
           insert sequence
          Length = 3262

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 269 ggcggcggatgaggaggacgacggg 293
           ||||||||| |||||||||||||||
Sbjct: 258 ggcggcggaggaggaggacgacggg 234
to top
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence
          Length = 3809201

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 188     gcaggacgcgccgttcgtcgc 208
               |||||||||||||||||||||
Sbjct: 1124986 gcaggacgcgccgttcgtcgc 1125006
to top
>emb|AL928712.8| Zebrafish DNA sequence from clone CH211-220O11 in linkage group 17,
              complete sequence
          Length = 137441

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 526    aagcaggcatcaggaatggtg 546
              |||||||||||||||||||||
Sbjct: 123066 aagcaggcatcaggaatggtg 123046
to top
>ref|NM_187909.1| Oryza sativa (japonica cultivar-group), Ozsa8351 predicted mRNA
          Length = 1890

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 270  gcggcggatgaggaggacgacggg 293
            ||||||||||||||||| ||||||
Sbjct: 1369 gcggcggatgaggaggatgacggg 1392
to top
>ref|XM_466677.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2550

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 238 tcgcgctcccgccgcccagg 257
           ||||||||||||||||||||
Sbjct: 720 tcgcgctcccgccgcccagg 739
to top
>gb|AF500227.1| Neurospora crassa RIP defective (rid) gene, complete cds
          Length = 3476

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 277  atgaggaggacgacggggag 296
            ||||||||||||||||||||
Sbjct: 2108 atgaggaggacgacggggag 2127
to top
>gb|AC116368.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0061D06,
              complete sequence
          Length = 172126

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 494    catcttcatctgcatcttac 513
              ||||||||||||||||||||
Sbjct: 147207 catcttcatctgcatcttac 147188
to top
>gb|AC135258.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
            OSJNBb0097K08 map C827S, complete sequence
          Length = 137870

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 269  ggcggcggatgaggaggacg 288
            ||||||||||||||||||||
Sbjct: 3048 ggcggcggatgaggaggacg 3029
to top
>gb|AC147811.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0026P08 map near C827S, complete sequence
          Length = 148676

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 269   ggcggcggatgaggaggacg 288
             ||||||||||||||||||||
Sbjct: 92650 ggcggcggatgaggaggacg 92669
to top
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome
          Length = 2584158

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 262    gaggagaggcggcggatgag 281
              ||||||||||||||||||||
Sbjct: 670031 gaggagaggcggcggatgag 670050
to top
>ref|XM_362120.1| Magnaporthe grisea 70-15 hypothetical protein (MG04565.4) partial cds
          Length = 1224

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 264  ggagaggcggcggatgaggaggacgacg 291
            ||||||||||||||||| || |||||||
Sbjct: 1129 ggagaggcggcggatgatgatgacgacg 1156
to top
>ref|XM_613176.2| PREDICTED: Bos taurus calcium channel, voltage-dependent, P/Q type,
            alpha 1A subunit (CACNA1A), partial mRNA
          Length = 6720

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 326  gatggccatcatctccttcc 345
            ||||||||||||||||||||
Sbjct: 6033 gatggccatcatctccttcc 6014
to top
>ref|XM_959563.1| Neurospora crassa OR74A hypothetical protein ( (AL442164) related to
            cytosine C5-DNA methyltransferase [Neurospora crassa
            OR74A] ) (NCU02034.1) partial mRNA
          Length = 2142

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 277  atgaggaggacgacggggag 296
            ||||||||||||||||||||
Sbjct: 1850 atgaggaggacgacggggag 1869
to top
>ref|XM_329223.1| Neurospora crassa OR74A hypothetical protein ( (AL442164) related to
            cytosine C5-DNA methyltransferase [Neurospora crassa
            OR74A] ) (NCU02034.1) partial mRNA
          Length = 2142

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 277  atgaggaggacgacggggag 296
            ||||||||||||||||||||
Sbjct: 1850 atgaggaggacgacggggag 1869
to top
>ref|NM_001001622.1| Sus scrofa chemokine C motif receptor 1 (XCR1), mRNA
          Length = 3220

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 337  tctccttcctgccttacttc 356
            ||||||||||||||||||||
Sbjct: 1677 tctccttcctgccttacttc 1658
to top
>ref|XM_389610.1| Gibberella zeae PH-1 chromosome 4 hypothetical protein (FG09434.1)
           partial mRNA
          Length = 516

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 173 ccgcgcggagctgcagcagg 192
           ||||||||||||||||||||
Sbjct: 285 ccgcgcggagctgcagcagg 304
to top
>ref|XM_536278.2| PREDICTED: Canis familiaris similar to chromosome condensation
           protein G (LOC479132), mRNA
          Length = 3609

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 267 gaggcggcggatgaggaggacgacgggg 294
           ||||||| ||| ||||||||||||||||
Sbjct: 259 gaggcggaggaggaggaggacgacgggg 286
to top
>emb|AL939120.1|SCO939120 Streptomyces coelicolor A3(2) complete genome; segment 17/29
          Length = 248550

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 278    tgaggaggacgacggggagt 297
              ||||||||||||||||||||
Sbjct: 116221 tgaggaggacgacggggagt 116202
to top
>emb|AL442164.1|NCB2J23 Neurospora crassa DNA linkage group I BAC clone B2J23
          Length = 65725

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 277   atgaggaggacgacggggag 296
             ||||||||||||||||||||
Sbjct: 39023 atgaggaggacgacggggag 39004
to top
>dbj|AP000570.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
              clone:P0711E10
          Length = 157903

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 270    gcggcggatgaggaggacgacggg 293
              ||||||||||||||||| ||||||
Sbjct: 103668 gcggcggatgaggaggatgacggg 103645
to top
>gb|AC148714.1| Macaca mulatta Major Histocompatibility Complex BAC MMU457P02, complete
             sequence
          Length = 159822

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 256   gggtcagaggagaggcggcg 275
             ||||||||||||||||||||
Sbjct: 21237 gggtcagaggagaggcggcg 21256
to top
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 494     catcttcatctgcatcttac 513
               ||||||||||||||||||||
Sbjct: 9602470 catcttcatctgcatcttac 9602489



 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 269     ggcggcggatgaggaggacg 288
               ||||||||||||||||||||
Sbjct: 7179507 ggcggcggatgaggaggacg 7179526
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 238      tcgcgctcccgccgcccagg 257
                ||||||||||||||||||||
Sbjct: 24079430 tcgcgctcccgccgcccagg 24079449



 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 494      catcttcatctgcatcttac 513
                ||||||||||||||||||||
Sbjct: 14834385 catcttcatctgcatcttac 14834404
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 270     gcggcggatgaggaggacgacggg 293
               ||||||||||||||||| ||||||
Sbjct: 8528515 gcggcggatgaggaggatgacggg 8528492
to top
>dbj|AP006436.1| Sus scrofa CC chemokine receptor genes(CCR3, CCR1, CCXCR1, FYCO1),
              complete and partial cds, clone: 0659A02
          Length = 167298

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 337    tctccttcctgccttacttc 356
              ||||||||||||||||||||
Sbjct: 133225 tctccttcctgccttacttc 133206
to top
>dbj|AB119267.1| Sus scrofa XCR1 mRNA for chemokine C motif receptor 1, complete cds,
            transcript variant C
          Length = 2749

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 337  tctccttcctgccttacttc 356
            ||||||||||||||||||||
Sbjct: 1206 tctccttcctgccttacttc 1187
to top
>dbj|AB119266.1| Sus scrofa XCR1 mRNA for chemokine C motif receptor 1, complete cds,
            transcript variant B
          Length = 3081

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 337  tctccttcctgccttacttc 356
            ||||||||||||||||||||
Sbjct: 1538 tctccttcctgccttacttc 1519
to top
>dbj|AB119265.1| Sus scrofa XCR1 mRNA for chemokine C motif receptor 1, complete cds,
            transcript variant A
          Length = 3220

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 337  tctccttcctgccttacttc 356
            ||||||||||||||||||||
Sbjct: 1677 tctccttcctgccttacttc 1658
to top
>dbj|AP000492.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
              clone:P0705D01
          Length = 147174

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 270    gcggcggatgaggaggacgacggg 293
              ||||||||||||||||| ||||||
Sbjct: 143470 gcggcggatgaggaggatgacggg 143447
to top
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 200     gttcgtcgccgccatcggcgcctg 223
               ||||| ||||||||||||||||||
Sbjct: 4736997 gttcgccgccgccatcggcgcctg 4736974
to top
>dbj|AP003458.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0701E03
          Length = 183245

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 270    gcggcggatgaggaggacgacggg 293
              ||||||||||||||||| ||||||
Sbjct: 159392 gcggcggatgaggaggatgacggg 159369
to top
>dbj|AP003525.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0537F07
          Length = 147724

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 270   gcggcggatgaggaggacgacggg 293
             ||||||||||||||||| ||||||
Sbjct: 44638 gcggcggatgaggaggatgacggg 44615
to top
>dbj|AP005648.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBa0055I13
          Length = 169486

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 494    catcttcatctgcatcttac 513
              ||||||||||||||||||||
Sbjct: 100188 catcttcatctgcatcttac 100207
to top
>dbj|AP005286.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1004_A05
          Length = 174290

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 238   tcgcgctcccgccgcccagg 257
             ||||||||||||||||||||
Sbjct: 38171 tcgcgctcccgccgcccagg 38190
to top
>dbj|AP004063.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1476_F05
          Length = 125426

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 238    tcgcgctcccgccgcccagg 257
              ||||||||||||||||||||
Sbjct: 114468 tcgcgctcccgccgcccagg 114487
to top
>emb|X55888.1|GDTRNAPR Chicken tRNA-Pro(AGG) and tRNA-Pro(CGG) genes
          Length = 887

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 362 gctgagctgggtcttcgcgtggct 385
           ||||||||||||| ||||||||||
Sbjct: 48  gctgagctgggtcatcgcgtggct 25
to top
>dbj|AK101310.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033033O21, full
           insert sequence
          Length = 2550

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 238 tcgcgctcccgccgcccagg 257
           ||||||||||||||||||||
Sbjct: 720 tcgcgctcccgccgcccagg 739
to top
>gb|AY664419.1| Zea mays cultivar Mo17 locus 9009, complete sequence
          Length = 405672

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 230   cgcgtccctcgcgctcccgccgcc 253
             |||||||| |||||||||||||||
Sbjct: 96123 cgcgtcccgcgcgctcccgccgcc 96146
to top
>gb|AY664415.1| Zea mays cultivar B73 locus 9009, complete sequence
          Length = 323584

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 230   cgcgtccctcgcgctcccgccgcc 253
             |||||||| |||||||||||||||
Sbjct: 84592 cgcgtcccgcgcgctcccgccgcc 84615
to top
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 494     catcttcatctgcatcttac 513
               ||||||||||||||||||||
Sbjct: 9674167 catcttcatctgcatcttac 9674186



 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 269     ggcggcggatgaggaggacg 288
               ||||||||||||||||||||
Sbjct: 7245401 ggcggcggatgaggaggacg 7245420
to top
>emb|AL731751.4|CNS08C80 Oryza sativa chromosome 12, . BAC OJ1510_A06 of library Monsanto from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 136155

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 494    catcttcatctgcatcttac 513
              ||||||||||||||||||||
Sbjct: 107800 catcttcatctgcatcttac 107781
to top
>emb|AL713950.4|CNS07YPT Oryza sativa chromosome 12, . BAC OJ1004_F11 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 103307

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 494   catcttcatctgcatcttac 513
             ||||||||||||||||||||
Sbjct: 58501 catcttcatctgcatcttac 58482
to top
>gb|AF010496.1|AF010496 Rhodobacter capsulatus strain SB1003, partial genome
          Length = 189370

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 197    gccgttcgtcgccgccatcggcgc 220
              |||||||| |||||||||||||||
Sbjct: 162421 gccgttcggcgccgccatcggcgc 162398


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,136,986
Number of Sequences: 3902068
Number of extensions: 4136986
Number of successful extensions: 98816
Number of sequences better than 10.0: 72
Number of HSP's better than 10.0 without gapping: 78
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 97437
Number of HSP's gapped (non-prelim): 1375
length of query: 576
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 553
effective length of database: 17,143,297,704
effective search space: 9480243630312
effective search space used: 9480243630312
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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