ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bart44g11 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_475736.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1521 Score = 129 bits (65), Expect = 1e-26 Identities = 104/117 (88%) Strand = Plus / Plus Query: 240 cgacctccccgccgtggccgtcgcctccttcgtcgagatcggcagccggctcgggcaggc 299 |||||||||||||| ||||||||| || ||||||||||||||| | |||||||| ||||| Sbjct: 225 cgacctccccgccgcggccgtcgcgtcgttcgtcgagatcggcgggcggctcggccaggc 284 Query: 300 gggctccgacctcggcgcctccgtcggcggcgccgtgcagcagctgtcgcggcagat 356 ||| ||||| ||||| || | |||||| |||||||||||||||||| |||||||||| Sbjct: 285 ggggtccgagctcggggcgtgcgtcgggggcgccgtgcagcagctggcgcggcagat 341 Score = 125 bits (63), Expect = 2e-25 Identities = 156/187 (83%) Strand = Plus / Plus Query: 40 atggagatctccctcgacgcgctgctgggcatgcagcggcacgggcaggacctgacctac 99 |||||||||||| |||||||| | | || |||||||||||||||||||||| | || Sbjct: 1 atggagatctccttcgacgcgtgggtcggggtgcagcggcacgggcaggacctcgcggac 60 Query: 100 aggctcgcgcagggcgtctcgggcctcctcctccacgtgcagccgccgcagctcccgtgg 159 | |||||||||||| ||||||||||||||||||||| ||| ||||||||||||| ||| Sbjct: 61 cgcctcgcgcagggcttctcgggcctcctcctccacgcgcacccgccgcagctccactgg 120 Query: 160 cccgccccgccgctgccgctcaagctcatctccttcgacatcaagctccccgccgtgccc 219 ||||||| |||||||| |||||| || ||||||| ||| | ||||||| ||| ||| Sbjct: 121 tccgcccccgcgctgccggccaagctgatacccttcgagatcgacctccccgtcgtcccc 180 Query: 220 ttcgtcg 226 ||||||| Sbjct: 181 ttcgtcg 187
>gb|AC111015.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1131_E09, complete sequence Length = 94399 Score = 129 bits (65), Expect = 1e-26 Identities = 158/189 (83%) Strand = Plus / Minus Query: 38 ccatggagatctccctcgacgcgctgctgggcatgcagcggcacgggcaggacctgacct 97 |||||||||||||| |||||||| | | || |||||||||||||||||||||| | Sbjct: 47736 ccatggagatctccttcgacgcgtgggtcggggtgcagcggcacgggcaggacctcgcgg 47677 Query: 98 acaggctcgcgcagggcgtctcgggcctcctcctccacgtgcagccgccgcagctcccgt 157 || | |||||||||||| ||||||||||||||||||||| ||| ||||||||||||| | Sbjct: 47676 accgcctcgcgcagggcttctcgggcctcctcctccacgcgcacccgccgcagctccact 47617 Query: 158 ggcccgccccgccgctgccgctcaagctcatctccttcgacatcaagctccccgccgtgc 217 || ||||||| |||||||| |||||| || ||||||| ||| | ||||||| ||| | Sbjct: 47616 ggtccgcccccgcgctgccggccaagctgatacccttcgagatcgacctccccgtcgtcc 47557 Query: 218 ccttcgtcg 226 ||||||||| Sbjct: 47556 ccttcgtcg 47548 Score = 129 bits (65), Expect = 1e-26 Identities = 104/117 (88%) Strand = Plus / Minus Query: 240 cgacctccccgccgtggccgtcgcctccttcgtcgagatcggcagccggctcgggcaggc 299 |||||||||||||| ||||||||| || ||||||||||||||| | |||||||| ||||| Sbjct: 47510 cgacctccccgccgcggccgtcgcgtcgttcgtcgagatcggcgggcggctcggccaggc 47451 Query: 300 gggctccgacctcggcgcctccgtcggcggcgccgtgcagcagctgtcgcggcagat 356 ||| ||||| ||||| || | |||||| |||||||||||||||||| |||||||||| Sbjct: 47450 ggggtccgagctcggggcgtgcgtcgggggcgccgtgcagcagctggcgcggcagat 47394
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 129 bits (65), Expect = 1e-26 Identities = 158/189 (83%) Strand = Plus / Minus Query: 38 ccatggagatctccctcgacgcgctgctgggcatgcagcggcacgggcaggacctgacct 97 |||||||||||||| |||||||| | | || |||||||||||||||||||||| | Sbjct: 26130396 ccatggagatctccttcgacgcgtgggtcggggtgcagcggcacgggcaggacctcgcgg 26130337 Query: 98 acaggctcgcgcagggcgtctcgggcctcctcctccacgtgcagccgccgcagctcccgt 157 || | |||||||||||| ||||||||||||||||||||| ||| ||||||||||||| | Sbjct: 26130336 accgcctcgcgcagggcttctcgggcctcctcctccacgcgcacccgccgcagctccact 26130277 Query: 158 ggcccgccccgccgctgccgctcaagctcatctccttcgacatcaagctccccgccgtgc 217 || ||||||| |||||||| |||||| || ||||||| ||| | ||||||| ||| | Sbjct: 26130276 ggtccgcccccgcgctgccggccaagctgatacccttcgagatcgacctccccgtcgtcc 26130217 Query: 218 ccttcgtcg 226 ||||||||| Sbjct: 26130216 ccttcgtcg 26130208 Score = 129 bits (65), Expect = 1e-26 Identities = 104/117 (88%) Strand = Plus / Minus Query: 240 cgacctccccgccgtggccgtcgcctccttcgtcgagatcggcagccggctcgggcaggc 299 |||||||||||||| ||||||||| || ||||||||||||||| | |||||||| ||||| Sbjct: 26130170 cgacctccccgccgcggccgtcgcgtcgttcgtcgagatcggcgggcggctcggccaggc 26130111 Query: 300 gggctccgacctcggcgcctccgtcggcggcgccgtgcagcagctgtcgcggcagat 356 ||| ||||| ||||| || | |||||| |||||||||||||||||| |||||||||| Sbjct: 26130110 ggggtccgagctcggggcgtgcgtcgggggcgccgtgcagcagctggcgcggcagat 26130054 Score = 40.1 bits (20), Expect = 6.9 Identities = 32/36 (88%) Strand = Plus / Plus Query: 249 cgccgtggccgtcgcctccttcgtcgagatcggcag 284 ||||| ||||||||||||| || |||| |||||||| Sbjct: 12193852 cgccgcggccgtcgcctccatcatcgacatcggcag 12193887 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 138 gcagccgccgcagctcccgtggcc 161 ||||||||||||| |||||||||| Sbjct: 12193732 gcagccgccgcagttcccgtggcc 12193755
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 245 tccccgccgtggccgtcgcctccttcgtcgagatcggcagccggctcgggcaggc 299 ||||||||| ||||||||||||| || |||| |||||||| ||||||| ||||| Sbjct: 18342617 tccccgccgcggccgtcgcctccgtcatcgacatcggcaggaggctcggccaggc 18342671
>dbj|AP005841.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0052M16 Length = 145423 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 245 tccccgccgtggccgtcgcctccttcgtcgagatcggcagccggctcgggcaggc 299 ||||||||| ||||||||||||| || |||| |||||||| ||||||| ||||| Sbjct: 143830 tccccgccgcggccgtcgcctccgtcatcgacatcggcaggaggctcggccaggc 143884
>dbj|AP004861.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0001A11 Length = 153252 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 245 tccccgccgtggccgtcgcctccttcgtcgagatcggcagccggctcgggcaggc 299 ||||||||| ||||||||||||| || |||| |||||||| ||||||| ||||| Sbjct: 5541 tccccgccgcggccgtcgcctccgtcatcgacatcggcaggaggctcggccaggc 5595
>dbj|AK119978.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-184-F04, full insert sequence Length = 700 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 245 tccccgccgtggccgtcgcctccttcgtcgagatcggcagccggctcgggcaggc 299 ||||||||| ||||||||||||| || |||| |||||||| ||||||| ||||| Sbjct: 141 tccccgccgcggccgtcgcctccgtcatcgacatcggcaggaggctcggccaggc 195
>ref|NM_191876.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 630 Score = 50.1 bits (25), Expect = 0.007 Identities = 79/97 (81%) Strand = Plus / Plus Query: 245 tccccgccgtggccgtcgcctccttcgtcgagatcggcagccggctcgggcaggcgggct 304 ||||||||| ||||||||||||| || |||| |||||| | ||||||| ||||| ||| Sbjct: 212 tccccgccgcggccgtcgcctccgtcatcgacatcggcgggaggctcggccaggctggcg 271 Query: 305 ccgacctcggcgcctccgtcggcggcgccgtgcagca 341 || | || || |||||||| |||||||||||||| Sbjct: 272 tggagattggggcgtccgtcggtggcgccgtgcagca 308 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 138 gcagccgccgcagctcccgtggcc 161 ||||||||||||| |||||||||| Sbjct: 96 gcagccgccgcagttcccgtggcc 119
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 50.1 bits (25), Expect = 0.007 Identities = 79/97 (81%) Strand = Plus / Plus Query: 245 tccccgccgtggccgtcgcctccttcgtcgagatcggcagccggctcgggcaggcgggct 304 ||||||||| ||||||||||||| || |||| |||||| | ||||||| ||||| ||| Sbjct: 30420956 tccccgccgcggccgtcgcctccgtcatcgacatcggcgggaggctcggccaggctggcg 30421015 Query: 305 ccgacctcggcgcctccgtcggcggcgccgtgcagca 341 || | || || |||||||| |||||||||||||| Sbjct: 30421016 tggagattggggcgtccgtcggtggcgccgtgcagca 30421052 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 225 cggcggcgggggcgtcgacctc 246 |||||||||||||||||||||| Sbjct: 35115274 cggcggcgggggcgtcgacctc 35115295 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 443 cgaccgtgccggtgccgtcg 462 |||||||||||||||||||| Sbjct: 30489969 cgaccgtgccggtgccgtcg 30489950 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 138 gcagccgccgcagctcccgtggcc 161 ||||||||||||| |||||||||| Sbjct: 30420840 gcagccgccgcagttcccgtggcc 30420863 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 222 cgtcggcggcgggggcgtcg 241 |||||||||||||||||||| Sbjct: 18919834 cgtcggcggcgggggcgtcg 18919815 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 219 cttcgtcggcggcgggggcg 238 |||||||||||||||||||| Sbjct: 10488049 cttcgtcggcggcgggggcg 10488030
>dbj|AP003142.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0435H01 Length = 160141 Score = 50.1 bits (25), Expect = 0.007 Identities = 79/97 (81%) Strand = Plus / Plus Query: 245 tccccgccgtggccgtcgcctccttcgtcgagatcggcagccggctcgggcaggcgggct 304 ||||||||| ||||||||||||| || |||| |||||| | ||||||| ||||| ||| Sbjct: 49219 tccccgccgcggccgtcgcctccgtcatcgacatcggcgggaggctcggccaggctggcg 49278 Query: 305 ccgacctcggcgcctccgtcggcggcgccgtgcagca 341 || | || || |||||||| |||||||||||||| Sbjct: 49279 tggagattggggcgtccgtcggtggcgccgtgcagca 49315 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 443 cgaccgtgccggtgccgtcg 462 |||||||||||||||||||| Sbjct: 118232 cgaccgtgccggtgccgtcg 118213 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 138 gcagccgccgcagctcccgtggcc 161 ||||||||||||| |||||||||| Sbjct: 49103 gcagccgccgcagttcccgtggcc 49126
>dbj|AP002899.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0456A01 Length = 143710 Score = 50.1 bits (25), Expect = 0.007 Identities = 79/97 (81%) Strand = Plus / Plus Query: 245 tccccgccgtggccgtcgcctccttcgtcgagatcggcagccggctcgggcaggcgggct 304 ||||||||| ||||||||||||| || |||| |||||| | ||||||| ||||| ||| Sbjct: 106683 tccccgccgcggccgtcgcctccgtcatcgacatcggcgggaggctcggccaggctggcg 106742 Query: 305 ccgacctcggcgcctccgtcggcggcgccgtgcagca 341 || | || || |||||||| |||||||||||||| Sbjct: 106743 tggagattggggcgtccgtcggtggcgccgtgcagca 106779 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 138 gcagccgccgcagctcccgtggcc 161 ||||||||||||| |||||||||| Sbjct: 106567 gcagccgccgcagttcccgtggcc 106590
>dbj|AK120504.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013122L20, full insert sequence Length = 2494 Score = 50.1 bits (25), Expect = 0.007 Identities = 79/97 (81%) Strand = Plus / Plus Query: 245 tccccgccgtggccgtcgcctccttcgtcgagatcggcagccggctcgggcaggcgggct 304 ||||||||| ||||||||||||| || |||| |||||| | ||||||| ||||| ||| Sbjct: 525 tccccgccgcggccgtcgcctccgtcatcgacatcggcgggaggctcggccaggctggcg 584 Query: 305 ccgacctcggcgcctccgtcggcggcgccgtgcagca 341 || | || || |||||||| |||||||||||||| Sbjct: 585 tggagattggggcgtccgtcggtggcgccgtgcagca 621 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 138 gcagccgccgcagctcccgtggcc 161 ||||||||||||| |||||||||| Sbjct: 409 gcagccgccgcagttcccgtggcc 432
>dbj|AK104681.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-A05, full insert sequence Length = 2245 Score = 50.1 bits (25), Expect = 0.007 Identities = 79/97 (81%) Strand = Plus / Plus Query: 245 tccccgccgtggccgtcgcctccttcgtcgagatcggcagccggctcgggcaggcgggct 304 ||||||||| ||||||||||||| || |||| |||||| | ||||||| ||||| ||| Sbjct: 343 tccccgccgcggccgtcgcctccgtcatcgacatcggcgggaggctcggccaggctggcg 402 Query: 305 ccgacctcggcgcctccgtcggcggcgccgtgcagca 341 || | || || |||||||| |||||||||||||| Sbjct: 403 tggagattggggcgtccgtcggtggcgccgtgcagca 439 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 138 gcagccgccgcagctcccgtggcc 161 ||||||||||||| |||||||||| Sbjct: 227 gcagccgccgcagttcccgtggcc 250
>dbj|AK065503.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013026G23, full insert sequence Length = 2503 Score = 50.1 bits (25), Expect = 0.007 Identities = 79/97 (81%) Strand = Plus / Plus Query: 245 tccccgccgtggccgtcgcctccttcgtcgagatcggcagccggctcgggcaggcgggct 304 ||||||||| ||||||||||||| || |||| |||||| | ||||||| ||||| ||| Sbjct: 578 tccccgccgcggccgtcgcctccgtcatcgacatcggcgggaggctcggccaggctggcg 637 Query: 305 ccgacctcggcgcctccgtcggcggcgccgtgcagca 341 || | || || |||||||| |||||||||||||| Sbjct: 638 tggagattggggcgtccgtcggtggcgccgtgcagca 674 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 138 gcagccgccgcagctcccgtggcc 161 ||||||||||||| |||||||||| Sbjct: 462 gcagccgccgcagttcccgtggcc 485
>dbj|AK064793.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000C13, full insert sequence Length = 2259 Score = 50.1 bits (25), Expect = 0.007 Identities = 79/97 (81%) Strand = Plus / Plus Query: 245 tccccgccgtggccgtcgcctccttcgtcgagatcggcagccggctcgggcaggcgggct 304 ||||||||| ||||||||||||| || |||| |||||| | ||||||| ||||| ||| Sbjct: 340 tccccgccgcggccgtcgcctccgtcatcgacatcggcgggaggctcggccaggctggcg 399 Query: 305 ccgacctcggcgcctccgtcggcggcgccgtgcagca 341 || | || || |||||||| |||||||||||||| Sbjct: 400 tggagattggggcgtccgtcggtggcgccgtgcagca 436 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 138 gcagccgccgcagctcccgtggcc 161 ||||||||||||| |||||||||| Sbjct: 224 gcagccgccgcagttcccgtggcc 247
>emb|AL121829.30|HSJ697K14 Human DNA sequence from clone RP4-697K14 on chromosome 20 Contains the C20orf148 gene for a novel tyrosine kinase, the PTK6 gene for protein tyrosine kinase 6, a novel gene, the EEF1A2 gene for eukaryotic translation elongation factor 1 alpha 2, the 5' end of the KCNQ2 gene for potassium voltage-gated channel (KQT-like subfamily member 2), the gene for peroxisomal proliferator-activated receptor A interacting complex 285 (PRIC285)(FLJ00244, KIAA1769), the C20orf149 gene, the gene for novel protein MGC5356 (MGC5356), the gene for a novel protein (LOC200213), a novel gene and thirteen CpG islands, complete sequence Length = 113196 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 148 cagctcccgtggcccgccccgcc 170 ||||||||||||||||||||||| Sbjct: 23772 cagctcccgtggcccgccccgcc 23794
>emb|AL939129.1|SCO939129 Streptomyces coelicolor A3(2) complete genome; segment 26/29 Length = 292200 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 467 cctcgccgccaccgccacgatcctcgg 493 ||||||||||||||||| ||||||||| Sbjct: 254323 cctcgccgccaccgccatgatcctcgg 254349
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 456 gccgtcgccttcctcgccgccaccgcc 482 ||||||||||||||| ||||||||||| Sbjct: 12903526 gccgtcgccttcctctccgccaccgcc 12903552 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 456 gccgtcgccttcctcgccgccaccgccac 484 ||||||||| ||||||||||| ||||||| Sbjct: 15852796 gccgtcgccctcctcgccgccgccgccac 15852824 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 455 tgccgtcgccttcctcgccgccaccgcc 482 |||||||||| || |||||||||||||| Sbjct: 14331791 tgccgtcgccgtcgtcgccgccaccgcc 14331764
>gb|AF163763.1|AF163763 Homo sapiens elongation factor 1 A-2 (EF1A-2) gene, complete cds Length = 12124 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 148 cagctcccgtggcccgccccgcc 170 ||||||||||||||||||||||| Sbjct: 6424 cagctcccgtggcccgccccgcc 6402
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 456 gccgtcgccttcctcgccgccaccgcc 482 ||||||||||||||| ||||||||||| Sbjct: 12857800 gccgtcgccttcctctccgccaccgcc 12857826 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 456 gccgtcgccttcctcgccgccaccgccac 484 ||||||||| ||||||||||| ||||||| Sbjct: 15806029 gccgtcgccctcctcgccgccgccgccac 15806057 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 455 tgccgtcgccttcctcgccgccaccgcc 482 |||||||||| || |||||||||||||| Sbjct: 14286068 tgccgtcgccgtcgtcgccgccaccgcc 14286041
>emb|AL844879.5|CNS08CB2 Oryza sativa chromosome 12, . BAC OSJNBa0036H15 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 156724 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 456 gccgtcgccttcctcgccgccaccgcc 482 ||||||||||||||| ||||||||||| Sbjct: 15701 gccgtcgccttcctctccgccaccgcc 15675
>ref|XM_473973.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1665 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 378 gccgcggccgccgaccccgcct 399 |||||||||||||||||||||| Sbjct: 82 gccgcggccgccgaccccgcct 103
>ref|NM_190371.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 627 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 225 cggcggcgggggcgtcgacctc 246 |||||||||||||||||||||| Sbjct: 601 cggcggcgggggcgtcgacctc 580
>gb|AC120527.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0011J22 map R10571S, complete sequence Length = 154441 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Plus Query: 249 cgccgtggccgtcgcctccttcgtcg 274 ||||||||||||| |||||||||||| Sbjct: 5556 cgccgtggccgtctcctccttcgtcg 5581
>gb|AC147812.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0073K23 map near R10571S, complete sequence Length = 161073 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Plus Query: 249 cgccgtggccgtcgcctccttcgtcg 274 ||||||||||||| |||||||||||| Sbjct: 104857 cgccgtggccgtctcctccttcgtcg 104882
>ref|XM_606855.2| PREDICTED: Bos taurus similar to MUS81 endonuclease homolog, transcript variant 1 (LOC528432), mRNA Length = 2247 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 132 ccacgtgcagccgccgcagctc 153 |||||||||||||||||||||| Sbjct: 1169 ccacgtgcagccgccgcagctc 1148
>gb|BT025432.1| Bos taurus MUS81 endonuclease homolog (S. cerevisiae) (MUS81), mRNA, complete cds Length = 2347 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 132 ccacgtgcagccgccgcagctc 153 |||||||||||||||||||||| Sbjct: 1174 ccacgtgcagccgccgcagctc 1153
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 443 cgaccgtgccggtgccgtcgcc 464 |||||||||||||||||||||| Sbjct: 987369 cgaccgtgccggtgccgtcgcc 987348
>emb|AL606669.4|OSJN00106 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0060E08, complete sequence Length = 166951 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 378 gccgcggccgccgaccccgcct 399 |||||||||||||||||||||| Sbjct: 102208 gccgcggccgccgaccccgcct 102229
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 378 gccgcggccgccgaccccgcct 399 |||||||||||||||||||||| Sbjct: 31929342 gccgcggccgccgaccccgcct 31929363 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 455 tgccgtcgccttcctcgccgccaccgcc 482 |||||||||| || |||||||||||||| Sbjct: 24200988 tgccgtcgccgtcgtcgccgccaccgcc 24201015
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Minus Query: 249 cgccgtggccgtcgcctccttcgtcg 274 ||||||||||||| |||||||||||| Sbjct: 3309429 cgccgtggccgtctcctccttcgtcg 3309404 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 152 tcccgtggcccgccccgccgctgcc 176 ||||||| ||||||||||||||||| Sbjct: 21429356 tcccgtgtcccgccccgccgctgcc 21429380
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Plus Query: 249 cgccgtggccgtcgcctccttcgtcg 274 ||||||||||||| |||||||||||| Sbjct: 25697439 cgccgtggccgtctcctccttcgtcg 25697464 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 377 tgccgcggccgccgaccccgcc 398 |||||||||||||||||||||| Sbjct: 1093187 tgccgcggccgccgaccccgcc 1093166 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 224 tcggcggcgggggcgtcgacc 244 ||||||||||||||||||||| Sbjct: 5510395 tcggcggcgggggcgtcgacc 5510375
>gb|AC007283.3| Homo sapiens BAC clone RP11-536I18 from 2, complete sequence Length = 127361 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 157 tggcccgccccgccgctgccgc 178 |||||||||||||||||||||| Sbjct: 96354 tggcccgccccgccgctgccgc 96375
>gb|AC146031.4| Pan troglodytes BAC clone RP43-124G6 from chromosome 7, complete sequence Length = 172449 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 157 tggcccgccccgccgctgccgc 178 |||||||||||||||||||||| Sbjct: 26633 tggcccgccccgccgctgccgc 26654
>dbj|AP003348.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0485B12 Length = 156047 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 225 cggcggcgggggcgtcgacctc 246 |||||||||||||||||||||| Sbjct: 122424 cggcggcgggggcgtcgacctc 122445
>dbj|AP003457.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0660D08 Length = 146915 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 377 tgccgcggccgccgaccccgcc 398 |||||||||||||||||||||| Sbjct: 69410 tgccgcggccgccgaccccgcc 69389
>dbj|AP003571.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0458E02 Length = 154458 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Plus Query: 249 cgccgtggccgtcgcctccttcgtcg 274 ||||||||||||| |||||||||||| Sbjct: 120884 cgccgtggccgtctcctccttcgtcg 120909
>dbj|AK070625.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023055D06, full insert sequence Length = 2165 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 378 gccgcggccgccgaccccgcct 399 |||||||||||||||||||||| Sbjct: 129 gccgcggccgccgaccccgcct 150
>dbj|AK065060.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001J11, full insert sequence Length = 1294 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 225 cggcggcgggggcgtcgacctc 246 |||||||||||||||||||||| Sbjct: 904 cggcggcgggggcgtcgacctc 883
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Minus Query: 249 cgccgtggccgtcgcctccttcgtcg 274 ||||||||||||| |||||||||||| Sbjct: 3318142 cgccgtggccgtctcctccttcgtcg 3318117 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 152 tcccgtggcccgccccgccgctgcc 176 ||||||| ||||||||||||||||| Sbjct: 21739555 tcccgtgtcccgccccgccgctgcc 21739579
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 269 tcgtcgagatcggcagccggc 289 ||||||||||||||||||||| Sbjct: 1963102 tcgtcgagatcggcagccggc 1963082
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 269 tcgtcgagatcggcagccggc 289 ||||||||||||||||||||| Sbjct: 1469273 tcgtcgagatcggcagccggc 1469293
>gb|AC136148.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0029K08, complete sequence Length = 136687 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 152 tcccgtggcccgccccgccgctgcc 176 ||||||| ||||||||||||||||| Sbjct: 87106 tcccgtgtcccgccccgccgctgcc 87130
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 269 tcgtcgagatcggcagccggc 289 ||||||||||||||||||||| Sbjct: 1356367 tcgtcgagatcggcagccggc 1356387
>emb|AL939107.1|SCO939107 Streptomyces coelicolor A3(2) complete genome; segment 4/29 Length = 298450 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 251 ccgtggccgtcgcctccttcg 271 ||||||||||||||||||||| Sbjct: 233434 ccgtggccgtcgcctccttcg 233414
>gb|AC079777.5| Homo sapiens BAC clone RP11-317J9 from 2, complete sequence Length = 123997 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 138 gcagccgccgcagctcccgtggccc 162 |||||||||||||||||| |||||| Sbjct: 66349 gcagccgccgcagctcccctggccc 66373
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 314 gcgcctccgtcggcggcgccg 334 ||||||||||||||||||||| Sbjct: 5403182 gcgcctccgtcggcggcgccg 5403202 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 375 cgtgccgcggccgccgaccccgcc 398 |||||||||| ||||||||||||| Sbjct: 4577903 cgtgccgcgggcgccgaccccgcc 4577926
>dbj|AP004758.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0664C05 Length = 165354 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 224 tcggcggcgggggcgtcgacc 244 ||||||||||||||||||||| Sbjct: 57303 tcggcggcgggggcgtcgacc 57283
>gb|AE005100.1| Halobacterium sp. NRC-1 section 131 of 170 of the complete genome Length = 10282 Score = 42.1 bits (21), Expect = 1.7 Identities = 33/37 (89%) Strand = Plus / Plus Query: 440 gcgcgaccgtgccggtgccgtcgccttcctcgccgcc 476 |||||||| ||||||||| | ||||||||||| |||| Sbjct: 8295 gcgcgaccatgccggtgcggccgccttcctcgacgcc 8331
>emb|AL731754.3|CNS08C83 Oryza sativa chromosome 12, . BAC OJ1016_H08 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 113212 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 456 gccgtcgccttcctcgccgccaccgccac 484 ||||||||| ||||||||||| ||||||| Sbjct: 84638 gccgtcgccctcctcgccgccgccgccac 84610
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 463 ccttcctcgccgccaccgccacgat 487 ||||| ||||||||||||||||||| Sbjct: 1694480 ccttcatcgccgccaccgccacgat 1694504
>ref|NM_119059.2| Arabidopsis thaliana calmodulin binding AT4G29150 mRNA, complete cds Length = 1369 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 335 tgcagcagctgtcgcggcag 354 |||||||||||||||||||| Sbjct: 289 tgcagcagctgtcgcggcag 270
>ref|NM_183593.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1785 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 219 cttcgtcggcggcgggggcg 238 |||||||||||||||||||| Sbjct: 939 cttcgtcggcggcgggggcg 958
>ref|XM_469934.1| Oryza sativa (japonica cultivar-group), mRNA Length = 4071 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 188 tctccttcgacatcaagctc 207 |||||||||||||||||||| Sbjct: 2780 tctccttcgacatcaagctc 2799
>gb|DQ213413.1| Taeniopygia guttata clone 0065P0005E12 brain derived neurotrophic factor-like mRNA, complete sequence Length = 1457 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 159 gcccgccccgccgctgccgc 178 |||||||||||||||||||| Sbjct: 52 gcccgccccgccgctgccgc 33
>gb|AC167561.3| Culex pipiens quinquefasciatus, clone Culex pipiens quinquefasciatus-3940117D9, complete sequence Length = 143368 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 438 ccgcgcgaccgtgccggtgc 457 |||||||||||||||||||| Sbjct: 136384 ccgcgcgaccgtgccggtgc 136365
>ref|NM_197012.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0055P24.1), mRNA Length = 615 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 222 cgtcggcggcgggggcgtcg 241 |||||||||||||||||||| Sbjct: 92 cgtcggcggcgggggcgtcg 111
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence Length = 3587082 Score = 40.1 bits (20), Expect = 6.9 Identities = 35/40 (87%) Strand = Plus / Minus Query: 422 cgcgcacttcgtcggtccgcgcgaccgtgccggtgccgtc 461 ||||| ||||||||||| ||||| | ||||||||||||| Sbjct: 1445705 cgcgcccttcgtcggtcagcgcggcgctgccggtgccgtc 1445666
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 223 gtcggcggcgggggcgtcga 242 |||||||||||||||||||| Sbjct: 452415 gtcggcggcgggggcgtcga 452434
>ref|NM_191887.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2997 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 443 cgaccgtgccggtgccgtcg 462 |||||||||||||||||||| Sbjct: 12 cgaccgtgccggtgccgtcg 31
>ref|NM_193155.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1878 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 222 cgtcggcggcgggggcgtcg 241 |||||||||||||||||||| Sbjct: 76 cgtcggcggcgggggcgtcg 57
>gb|AC125735.1| Leishmania major strain Friedlin chromosome 3, complete sequence Length = 384518 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 cccgccccgccgctgccgct 179 |||||||||||||||||||| Sbjct: 210163 cccgccccgccgctgccgct 210182
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 156 gtggcccgccccgccgctgccgct 179 ||||||||||||||||| |||||| Sbjct: 191766 gtggcccgccccgccgcggccgct 191743
>gb|AC146816.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone B1434D10 map near E1419S, complete sequence Length = 133421 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 458 cgtcgccttcctcgccgcca 477 |||||||||||||||||||| Sbjct: 41770 cgtcgccttcctcgccgcca 41751
>ref|NM_080927.3| Homo sapiens discoidin, CUB and LCCL domain containing 2 (DCBLD2), mRNA Length = 6093 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 373 tccgtgccgcggccgccgaccccgcctg 400 |||| ||||||||||||| ||||||||| Sbjct: 416 tccgggccgcggccgccgcccccgcctg 443
>gb|AC144452.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBa0025G07, complete sequence Length = 167136 Score = 40.1 bits (20), Expect = 6.9 Identities = 32/36 (88%) Strand = Plus / Plus Query: 249 cgccgtggccgtcgcctccttcgtcgagatcggcag 284 ||||| ||||||||||||| || |||| |||||||| Sbjct: 70964 cgccgcggccgtcgcctccatcatcgacatcggcag 70999 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 138 gcagccgccgcagctcccgtggcc 161 ||||||||||||| |||||||||| Sbjct: 70844 gcagccgccgcagttcccgtggcc 70867
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 188 tctccttcgacatcaagctc 207 |||||||||||||||||||| Sbjct: 32567387 tctccttcgacatcaagctc 32567368 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 458 cgtcgccttcctcgccgcca 477 |||||||||||||||||||| Sbjct: 23944994 cgtcgccttcctcgccgcca 23945013 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 458 cgtcgccttcctcgccgcca 477 |||||||||||||||||||| Sbjct: 23863773 cgtcgccttcctcgccgcca 23863792 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 180 caagctcatctccttcgaca 199 |||||||||||||||||||| Sbjct: 5723811 caagctcatctccttcgaca 5723792
>ref|XM_193558.6| PREDICTED: Mus musculus IBR domain containing 1 (Ibrdc1), mRNA Length = 2834 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 162 cgccccgccgctgccgctca 181 |||||||||||||||||||| Sbjct: 555 cgccccgccgctgccgctca 536
>ref|XM_883443.1| Leishmania major strain Friedlin RNA pseudouridylate synthase (L302.08) partial mRNA Length = 4410 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 321 cgtcggcggcgccgtgcagc 340 |||||||||||||||||||| Sbjct: 3586 cgtcggcggcgccgtgcagc 3567
>emb|AL389894.4|LMFLCHR4A Leishmania major Friedlin chromosome 4, left end Length = 225394 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 321 cgtcggcggcgccgtgcagc 340 |||||||||||||||||||| Sbjct: 86172 cgtcggcggcgccgtgcagc 86153
>gb|AC116557.30| Mus musculus strain C57BL/6J clone rp23-239f10 map 8, complete sequence Length = 232571 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 cgccccgccgctgccgctca 181 |||||||||||||||||||| Sbjct: 158033 cgccccgccgctgccgctca 158052
>gb|AC126430.3| Mus musculus BAC clone RP24-406F17 from chromosome 10, complete sequence Length = 154482 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 162 cgccccgccgctgccgctca 181 |||||||||||||||||||| Sbjct: 126984 cgccccgccgctgccgctca 126965
>ref|XM_855504.1| PREDICTED: Canis familiaris similar to nudE nuclear distribution gene E homolog like 1 (A. nidulans) isoform B, transcript variant 3 (LOC489495), mRNA Length = 2398 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 120 gggcctcctcctccacgtgc 139 |||||||||||||||||||| Sbjct: 1920 gggcctcctcctccacgtgc 1939
>ref|XM_855469.1| PREDICTED: Canis familiaris similar to nudE nuclear distribution gene E homolog like 1 (A. nidulans) isoform B, transcript variant 2 (LOC489495), mRNA Length = 2406 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 120 gggcctcctcctccacgtgc 139 |||||||||||||||||||| Sbjct: 1928 gggcctcctcctccacgtgc 1947
>ref|XM_844953.1| PREDICTED: Canis familiaris similar to nudE nuclear distribution gene E homolog like 1 (A. nidulans) isoform B, transcript variant 1 (LOC489495), mRNA Length = 2371 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 120 gggcctcctcctccacgtgc 139 |||||||||||||||||||| Sbjct: 1893 gggcctcctcctccacgtgc 1912
>gb|BC023586.2| Homo sapiens chromosome 3 open reading frame 62, mRNA (cDNA clone MGC:23381 IMAGE:4650297), complete cds Length = 2663 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 157 tggcccgccccgccgctgcc 176 |||||||||||||||||||| Sbjct: 827 tggcccgccccgccgctgcc 808
>gb|BT009381.1| Triticum aestivum clone wlm96.pk032.f11:fis, full insert mRNA sequence Length = 1874 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 316 gcctccgtcggcggcgccgt 335 |||||||||||||||||||| Sbjct: 486 gcctccgtcggcggcgccgt 505
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 294 gcaggcgggctccgacctcg 313 |||||||||||||||||||| Sbjct: 3164217 gcaggcgggctccgacctcg 3164236
>emb|BX572597.1| Rhodopseudomonas palustris CGA009 complete genome; segment 5/16 Length = 349737 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 222 cgtcggcggcgggggcgtcg 241 |||||||||||||||||||| Sbjct: 100764 cgtcggcggcgggggcgtcg 100745
>emb|AL939128.1|SCO939128 Streptomyces coelicolor A3(2) complete genome; segment 25/29 Length = 296500 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 48 ctccctcgacgcgctgctgg 67 |||||||||||||||||||| Sbjct: 291456 ctccctcgacgcgctgctgg 291475
>emb|AL939123.1|SCO939123 Streptomyces coelicolor A3(2) complete genome; segment 20/29 Length = 300100 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 254 tggccgtcgcctccttcgtc 273 |||||||||||||||||||| Sbjct: 290676 tggccgtcgcctccttcgtc 290695
>emb|AL606998.3|OSJN00125 Oryza sativa genomic DNA, chromosome 4, BAC clone: OJ000223_09, complete sequence Length = 120583 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 455 tgccgtcgccttcctcgccgccaccgcc 482 |||||||||| || |||||||||||||| Sbjct: 23400 tgccgtcgccgtcgtcgccgccaccgcc 23427
>emb|AL606623.3|OSJN00053 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0081L15, complete sequence Length = 150864 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 455 tgccgtcgccttcctcgccgccaccgcc 482 |||||||||| || |||||||||||||| Sbjct: 90213 tgccgtcgccgtcgtcgccgccaccgcc 90240
>emb|AL591985.1|RME591985 Sinorhizobium meliloti 1021 complete pSymB Length = 1683333 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 453 ggtgccgtcgccttcctcgc 472 |||||||||||||||||||| Sbjct: 510664 ggtgccgtcgccttcctcgc 510645
>emb|AL161574.2|ATCHRIV70 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 70 Length = 198429 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 335 tgcagcagctgtcgcggcag 354 |||||||||||||||||||| Sbjct: 107140 tgcagcagctgtcgcggcag 107121
>emb|AL078470.1|ATF19B15 Arabidopsis thaliana DNA chromosome 4, BAC clone F19B15 (ESSA project) Length = 101679 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 335 tgcagcagctgtcgcggcag 354 |||||||||||||||||||| Sbjct: 90667 tgcagcagctgtcgcggcag 90648
>gb|AC114474.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0032N04, from chromosome 10, complete sequence Length = 159445 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 123 cctcctcctccacgtgcagccgcc 146 ||||||||||||||||| |||||| Sbjct: 82872 cctcctcctccacgtgccgccgcc 82849
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 315 cgcctccgtcggcggcgccgtgca 338 ||||||| |||||||||||||||| Sbjct: 2980096 cgcctccctcggcggcgccgtgca 2980073
>dbj|AK056350.1| Homo sapiens cDNA FLJ31788 fis, clone NT2RI2008598, weakly similar to MILK FAT GLOBULE-EGF FACTOR 8 PRECURSOR Length = 2020 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 373 tccgtgccgcggccgccgaccccgcctg 400 |||| ||||||||||||| ||||||||| Sbjct: 409 tccgggccgcggccgccgcccccgcctg 436
>gb|AC092748.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0019N10, from chromosome 10, complete sequence Length = 192267 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 123 cctcctcctccacgtgcagccgcc 146 ||||||||||||||||| |||||| Sbjct: 149508 cctcctcctccacgtgccgccgcc 149531
>gb|AC182460.2| Gallus gallus BAC clone CH261-132N3 from chromosome ul, complete sequence Length = 212965 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 379 ccgcggccgccgaccccgcc 398 |||||||||||||||||||| Sbjct: 141791 ccgcggccgccgaccccgcc 141772
>gb|AC104179.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0021B21, from chromosome 3, complete sequence Length = 166777 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 180 caagctcatctccttcgaca 199 |||||||||||||||||||| Sbjct: 107360 caagctcatctccttcgaca 107379
>gb|AY004280.1| Bifidobacterium bifidum heat shock protein 60 (hsp60) gene, partial cds Length = 590 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 469 tcgccgccaccgccacgatc 488 |||||||||||||||||||| Sbjct: 176 tcgccgccaccgccacgatc 195
>gb|AF387547.1|AF387547 Homo sapiens endothelial and smooth muscle cell-derived neuropilin-like protein (ESDN) mRNA, complete cds Length = 2939 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 373 tccgtgccgcggccgccgaccccgcctg 400 |||| ||||||||||||| ||||||||| Sbjct: 64 tccgggccgcggccgccgcccccgcctg 91
>gb|AC177806.2| Gallus gallus BAC clone CH261-13L12 from chromosome ul, complete sequence Length = 250495 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 379 ccgcggccgccgaccccgcc 398 |||||||||||||||||||| Sbjct: 71012 ccgcggccgccgaccccgcc 70993
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 216 gcccttcgtcggcggcgggg 235 |||||||||||||||||||| Sbjct: 1717473 gcccttcgtcggcggcgggg 1717454
>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete genome Length = 3570858 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 226 ggcggcgggggcgtcgacct 245 |||||||||||||||||||| Sbjct: 3340725 ggcggcgggggcgtcgacct 3340706
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 222 cgtcggcggcgggggcgtcg 241 |||||||||||||||||||| Sbjct: 17374056 cgtcggcggcgggggcgtcg 17374037 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 123 cctcctcctccacgtgcagccgcc 146 ||||||||||||||||| |||||| Sbjct: 11764811 cctcctcctccacgtgccgccgcc 11764788
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 450 gccggtgccgtcgccttcct 469 |||||||||||||||||||| Sbjct: 13986134 gccggtgccgtcgccttcct 13986153
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 188 tctccttcgacatcaagctc 207 |||||||||||||||||||| Sbjct: 32657897 tctccttcgacatcaagctc 32657878 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 458 cgtcgccttcctcgccgcca 477 |||||||||||||||||||| Sbjct: 23856861 cgtcgccttcctcgccgcca 23856880 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 180 caagctcatctccttcgaca 199 |||||||||||||||||||| Sbjct: 5723024 caagctcatctccttcgaca 5723005
>gb|AC026303.25| Homo sapiens 3 BAC RP11-581D23 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 35018 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 373 tccgtgccgcggccgccgaccccgcctg 400 |||| ||||||||||||| ||||||||| Sbjct: 27772 tccgggccgcggccgccgcccccgcctg 27799
>gb|AC160211.1| Genomic seqeunce for Zea mays BAC clone ZMMBBb0448F23, complete sequence Length = 132549 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 cggcggcgccgtgcagcagc 343 |||||||||||||||||||| Sbjct: 91841 cggcggcgccgtgcagcagc 91860
>dbj|AP002480.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0469E05 Length = 160769 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 219 cttcgtcggcggcgggggcg 238 |||||||||||||||||||| Sbjct: 133009 cttcgtcggcggcgggggcg 132990
>gb|AC037425.7|AC037425 Oryza sativa chromosome 10 BAC OSJNBa0055P24 genomic sequence, complete sequence Length = 134058 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 222 cgtcggcggcgggggcgtcg 241 |||||||||||||||||||| Sbjct: 3051 cgtcggcggcgggggcgtcg 3032
>gb|BT003896.1| Arabidopsis thaliana clone RAFL15-22-N03 (R20628) unknown protein (At4g29150) mRNA, complete cds Length = 1385 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 335 tgcagcagctgtcgcggcag 354 |||||||||||||||||||| Sbjct: 289 tgcagcagctgtcgcggcag 270
>gb|AC087096.11| Oryza sativa chromosome 3 BAC OSJNBa0087O09 genomic sequence, complete sequence Length = 119134 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 188 tctccttcgacatcaagctc 207 |||||||||||||||||||| Sbjct: 100836 tctccttcgacatcaagctc 100817
>dbj|AP004357.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1074C08 Length = 165701 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 222 cgtcggcggcgggggcgtcg 241 |||||||||||||||||||| Sbjct: 92224 cgtcggcggcgggggcgtcg 92205
>dbj|AP004641.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1147B04 Length = 142956 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 222 cgtcggcggcgggggcgtcg 241 |||||||||||||||||||| Sbjct: 126845 cgtcggcggcgggggcgtcg 126826
>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome Length = 1849742 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 470 cgccgccaccgccacgatcc 489 |||||||||||||||||||| Sbjct: 1192898 cgccgccaccgccacgatcc 1192879
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 280 ggcagccggctcgggcaggc 299 |||||||||||||||||||| Sbjct: 4806696 ggcagccggctcgggcaggc 4806677
>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome Length = 3147090 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 443 cgaccgtgccggtgccgtcg 462 |||||||||||||||||||| Sbjct: 2114437 cgaccgtgccggtgccgtcg 2114456
>dbj|AP005911.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0040C06 Length = 158875 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 450 gccggtgccgtcgccttcct 469 |||||||||||||||||||| Sbjct: 105255 gccggtgccgtcgccttcct 105274
>gb|AC121247.2| Homo sapiens chromosome 3 clone RP11-3B7, complete sequence Length = 170787 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 157 tggcccgccccgccgctgcc 176 |||||||||||||||||||| Sbjct: 103818 tggcccgccccgccgctgcc 103799
>dbj|AK120751.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023004P12, full insert sequence Length = 2265 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 443 cgaccgtgccggtgccgtcg 462 |||||||||||||||||||| Sbjct: 397 cgaccgtgccggtgccgtcg 416
>dbj|AK111138.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-176-D11, full insert sequence Length = 560 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 180 caagctcatctccttcgaca 199 |||||||||||||||||||| Sbjct: 384 caagctcatctccttcgaca 403
>dbj|AK103167.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033121F02, full insert sequence Length = 2421 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 222 cgtcggcggcgggggcgtcg 241 |||||||||||||||||||| Sbjct: 121 cgtcggcggcgggggcgtcg 102
>dbj|AK073229.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033020D07, full insert sequence Length = 3324 Score = 40.1 bits (20), Expect = 6.9 Identities = 32/36 (88%) Strand = Plus / Plus Query: 249 cgccgtggccgtcgcctccttcgtcgagatcggcag 284 ||||| ||||||||||||| || |||| |||||||| Sbjct: 252 cgccgcggccgtcgcctccatcatcgacatcggcag 287 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 138 gcagccgccgcagctcccgtggcc 161 ||||||||||||| |||||||||| Sbjct: 132 gcagccgccgcagttcccgtggcc 155
>dbj|AK066158.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013054I19, full insert sequence Length = 1126 Score = 40.1 bits (20), Expect = 6.9 Identities = 32/36 (88%) Strand = Plus / Plus Query: 249 cgccgtggccgtcgcctccttcgtcgagatcggcag 284 ||||| ||||||||||||| || |||| |||||||| Sbjct: 252 cgccgcggccgtcgcctccatcatcgacatcggcag 287 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 138 gcagccgccgcagctcccgtggcc 161 ||||||||||||| |||||||||| Sbjct: 132 gcagccgccgcagttcccgtggcc 155
>dbj|AK061533.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-F04, full insert sequence Length = 1162 Score = 40.1 bits (20), Expect = 6.9 Identities = 32/36 (88%) Strand = Plus / Plus Query: 249 cgccgtggccgtcgcctccttcgtcgagatcggcag 284 ||||| ||||||||||||| || |||| |||||||| Sbjct: 292 cgccgcggccgtcgcctccatcatcgacatcggcag 327 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 138 gcagccgccgcagctcccgtggcc 161 ||||||||||||| |||||||||| Sbjct: 172 gcagccgccgcagttcccgtggcc 195
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 323 tcggcggcgccgtgcagcag 342 |||||||||||||||||||| Sbjct: 983788 tcggcggcgccgtgcagcag 983807
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 222 cgtcggcggcgggggcgtcg 241 |||||||||||||||||||| Sbjct: 17383096 cgtcggcggcgggggcgtcg 17383077 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 123 cctcctcctccacgtgcagccgcc 146 ||||||||||||||||| |||||| Sbjct: 11772151 cctcctcctccacgtgccgccgcc 11772128
>emb|AL731749.3|CNS08C7Y Oryza sativa chromosome 12, . BAC OJ1312_H10 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 141067 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 455 tgccgtcgccttcctcgccgccaccgcc 482 |||||||||| || |||||||||||||| Sbjct: 127409 tgccgtcgccgtcgtcgccgccaccgcc 127382
>emb|AL732645.4|CNS08C9K Oryza sativa chromosome 12, . BAC OSJNBb0090H23 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 134370 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 455 tgccgtcgccttcctcgccgccaccgcc 482 |||||||||| || |||||||||||||| Sbjct: 38990 tgccgtcgccgtcgtcgccgccaccgcc 38963
>gb|AE017221.1| Thermus thermophilus HB27, complete genome Length = 1894877 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 470 cgccgccaccgccacgatcc 489 |||||||||||||||||||| Sbjct: 867808 cgccgccaccgccacgatcc 867789
>emb|AL591782.1|SME591782 Sinorhizobium meliloti 1021 complete chromosome; segment 1/12 Length = 260050 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 186 catctccttcgacatcaagc 205 |||||||||||||||||||| Sbjct: 177654 catctccttcgacatcaagc 177635
>dbj|AB066097.1| Pseudomonas sp. TK4 gene for sphingomyelinase, complete cds Length = 2388 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 460 tcgccttcctcgccgccacc 479 |||||||||||||||||||| Sbjct: 585 tcgccttcctcgccgccacc 604 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,935,177 Number of Sequences: 3902068 Number of extensions: 3935177 Number of successful extensions: 106378 Number of sequences better than 10.0: 126 Number of HSP's better than 10.0 without gapping: 144 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 98290 Number of HSP's gapped (non-prelim): 8082 length of query: 510 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 488 effective length of database: 17,147,199,772 effective search space: 8367833488736 effective search space used: 8367833488736 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
