Clone Name | bart44g08 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | CH60_BACFO (P81284) 60 kDa chaperonin (Protein Cpn60) (groEL pro... | 29 | 7.7 | 2 | DRPE_CRAPL (P22242) Desiccation-related protein PCC13-62 precursor | 29 | 7.7 | 3 | PLXB1_HUMAN (O43157) Plexin-B1 precursor (Semaphorin receptor SEP) | 29 | 7.7 |
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>CH60_BACFO (P81284) 60 kDa chaperonin (Protein Cpn60) (groEL protein)| Length = 543 Score = 29.3 bits (64), Expect = 7.7 Identities = 15/31 (48%), Positives = 21/31 (67%) Frame = +3 Query: 156 SKIAIHKATVELHGSAYVRATPALLGDQGED 248 ++ AI + TV G AY+RA PAL G +GE+ Sbjct: 402 TRAAIEEGTVPGGGVAYLRAIPALEGLKGEN 432
>DRPE_CRAPL (P22242) Desiccation-related protein PCC13-62 precursor| Length = 313 Score = 29.3 bits (64), Expect = 7.7 Identities = 16/38 (42%), Positives = 20/38 (52%) Frame = -3 Query: 385 VQSAGSSAFLRGLGHEPEMKSAGEKTAIQSSAEGFSHP 272 VQ A S F+R + + + G AIQSS EGF P Sbjct: 83 VQKANLSPFIRDIIAQFAYQEFGHVRAIQSSVEGFPRP 120
>PLXB1_HUMAN (O43157) Plexin-B1 precursor (Semaphorin receptor SEP)| Length = 2135 Score = 29.3 bits (64), Expect = 7.7 Identities = 24/96 (25%), Positives = 37/96 (38%), Gaps = 5/96 (5%) Frame = +3 Query: 135 PEGIQPLSKIAIHKATVELHGSAYVRATPALLGDQGEDTVWVTVKYGWENPSADDWIA-- 308 PE + P + + ATV P +G W+T + G E P AD+W Sbjct: 807 PEALHPTVPLDLPPATVP------ATTFPGAMGSVKPALDWLT-REGGELPEADEWTGGD 859 Query: 309 --VFSPADFISGSCPNPR-RNADEPALCTAPIKYQY 407 FS + +SG + P + + + YQY Sbjct: 860 APAFSTSTLLSGDGDSAELEGPPAPLILPSSLDYQY 895 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 58,714,340 Number of Sequences: 219361 Number of extensions: 971636 Number of successful extensions: 3012 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 2965 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3012 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4430660157 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)