Clone Name | bart44g08 |
---|---|
Clone Library Name | barley_pub |
>ref|XM_483478.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2234 Score = 291 bits (147), Expect = 1e-75 Identities = 333/395 (84%) Strand = Plus / Plus Query: 145 tccagccgctgtccaagatcgccatccacaaggccaccgtggaactgcacggctccgcgt 204 ||||||||||||| ||||||||| |||||||||||||||| || || ||||||||||||| Sbjct: 142 tccagccgctgtcgaagatcgccgtccacaaggccaccgtcgacctccacggctccgcgt 201 Query: 205 acgtgcgggcgacgccggcgttgctcggcgaccagggcgaggacaccgtatgggtcaccg 264 ||| | || |||||||||||||||||||||||||| || ||||| | |||||||| | Sbjct: 202 tcgtcagcgccacgccggcgttgctcggcgaccagggagaagacacagagtgggtcacgg 261 Query: 265 tgaaatacgggtgggagaacccttccgccgacgactggatcgccgtcttctcccccgccg 324 |||||||||| |||| ||||||||||| ||||||||||| || |||||||| || |||| Sbjct: 262 tgaaatacggctgggcaaacccttccgctgacgactggattgctgtcttctctccggccg 321 Query: 325 atttcatctcgggctcgtgccctaacccacggaggaacgccgacgagccggcactctgca 384 ||||||||||||| || |||||||| || || || | || |||||| ||||||| Sbjct: 322 atttcatctcgggttcttgccctaatccttccagatacccggatgagccgctgctctgca 381 Query: 385 cagcgcctatcaagtatcagtacgccaaccactcgggcaactaccgctactggggcaagg 444 | || || || |||||||| | ||| ||| |||||| |||||| ||||||||||||| Sbjct: 382 ctgcaccaataaagtatcaattcgcaaactactcggcgaactacgtgtactggggcaagg 441 Query: 445 gcaccatccggttccagatcatcaaccagcgctccgacttctccttcgccctcttcaccg 504 ||| ||||||||||||| ||||||||||||||| |||||||||||||||||| ||||||| Sbjct: 442 gcagcatccggttccagctcatcaaccagcgctacgacttctccttcgccctgttcaccg 501 Query: 505 gcggcttcgaaaatccgaaacttgtggcggtgtcg 539 ||||| | ||||| || || || |||||||||||| Sbjct: 502 gcggcctggaaaaccctaagctggtggcggtgtcg 536
>dbj|AK072408.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023083H19, full insert sequence Length = 2233 Score = 291 bits (147), Expect = 1e-75 Identities = 333/395 (84%) Strand = Plus / Plus Query: 145 tccagccgctgtccaagatcgccatccacaaggccaccgtggaactgcacggctccgcgt 204 ||||||||||||| ||||||||| |||||||||||||||| || || ||||||||||||| Sbjct: 141 tccagccgctgtcgaagatcgccgtccacaaggccaccgtcgacctccacggctccgcgt 200 Query: 205 acgtgcgggcgacgccggcgttgctcggcgaccagggcgaggacaccgtatgggtcaccg 264 ||| | || |||||||||||||||||||||||||| || ||||| | |||||||| | Sbjct: 201 tcgtcagcgccacgccggcgttgctcggcgaccagggagaagacacagagtgggtcacgg 260 Query: 265 tgaaatacgggtgggagaacccttccgccgacgactggatcgccgtcttctcccccgccg 324 |||||||||| |||| ||||||||||| ||||||||||| || |||||||| || |||| Sbjct: 261 tgaaatacggctgggcaaacccttccgctgacgactggattgctgtcttctctccggccg 320 Query: 325 atttcatctcgggctcgtgccctaacccacggaggaacgccgacgagccggcactctgca 384 ||||||||||||| || |||||||| || || || | || |||||| ||||||| Sbjct: 321 atttcatctcgggttcttgccctaatccttccagatacccggatgagccgctgctctgca 380 Query: 385 cagcgcctatcaagtatcagtacgccaaccactcgggcaactaccgctactggggcaagg 444 | || || || |||||||| | ||| ||| |||||| |||||| ||||||||||||| Sbjct: 381 ctgcaccaataaagtatcaattcgcaaactactcggcgaactacgtgtactggggcaagg 440 Query: 445 gcaccatccggttccagatcatcaaccagcgctccgacttctccttcgccctcttcaccg 504 ||| ||||||||||||| ||||||||||||||| |||||||||||||||||| ||||||| Sbjct: 441 gcagcatccggttccagctcatcaaccagcgctacgacttctccttcgccctgttcaccg 500 Query: 505 gcggcttcgaaaatccgaaacttgtggcggtgtcg 539 ||||| | ||||| || || || |||||||||||| Sbjct: 501 gcggcctggaaaaccctaagctggtggcggtgtcg 535
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 123 bits (62), Expect = 6e-25 Identities = 74/78 (94%) Strand = Plus / Plus Query: 432 tactggggcaagggcaccatccggttccagatcatcaaccagcgctccgacttctccttc 491 |||||||||||||||| ||||||||||||| ||||||||||||||| ||||||||||||| Sbjct: 26434552 tactggggcaagggcagcatccggttccagctcatcaaccagcgctacgacttctccttc 26434611 Query: 492 gccctcttcaccggcggc 509 ||||| |||||||||||| Sbjct: 26434612 gccctgttcaccggcggc 26434629 Score = 111 bits (56), Expect = 2e-21 Identities = 86/96 (89%) Strand = Plus / Plus Query: 145 tccagccgctgtccaagatcgccatccacaaggccaccgtggaactgcacggctccgcgt 204 ||||||||||||| ||||||||| |||||||||||||||| || || ||||||||||||| Sbjct: 26432528 tccagccgctgtcgaagatcgccgtccacaaggccaccgtcgacctccacggctccgcgt 26432587 Query: 205 acgtgcgggcgacgccggcgttgctcggcgaccagg 240 ||| | || ||||||||||||||||||||||||| Sbjct: 26432588 tcgtcagcgccacgccggcgttgctcggcgaccagg 26432623 Score = 111 bits (56), Expect = 2e-21 Identities = 86/96 (89%) Strand = Plus / Plus Query: 145 tccagccgctgtccaagatcgccatccacaaggccaccgtggaactgcacggctccgcgt 204 ||||||||||||| ||||||||| |||||||||||||||| || || ||||||||||||| Sbjct: 26427542 tccagccgctgtcgaagatcgccgtccacaaggccaccgtcgacctccacggctccgcgt 26427601 Query: 205 acgtgcgggcgacgccggcgttgctcggcgaccagg 240 ||| | || ||||||||||||||||||||||||| Sbjct: 26427602 tcgtcagcgccacgccggcgttgctcggcgaccagg 26427637 Score = 81.8 bits (41), Expect = 2e-12 Identities = 68/77 (88%) Strand = Plus / Plus Query: 255 tgggtcaccgtgaaatacgggtgggagaacccttccgccgacgactggatcgccgtcttc 314 |||||||| ||||||||||| |||| ||||||||||| ||||||||||| || |||||| Sbjct: 26434086 tgggtcacggtgaaatacggctgggcaaacccttccgctgacgactggattgctgtcttc 26434145 Query: 315 tcccccgccgatttcat 331 || || ||||||||||| Sbjct: 26434146 tctccggccgatttcat 26434162 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 493 ccctcttcaccggcggcttc 512 |||||||||||||||||||| Sbjct: 15638397 ccctcttcaccggcggcttc 15638378
>dbj|AP003920.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1789_C07 Length = 138944 Score = 123 bits (62), Expect = 6e-25 Identities = 74/78 (94%) Strand = Plus / Plus Query: 432 tactggggcaagggcaccatccggttccagatcatcaaccagcgctccgacttctccttc 491 |||||||||||||||| ||||||||||||| ||||||||||||||| ||||||||||||| Sbjct: 84104 tactggggcaagggcagcatccggttccagctcatcaaccagcgctacgacttctccttc 84163 Query: 492 gccctcttcaccggcggc 509 ||||| |||||||||||| Sbjct: 84164 gccctgttcaccggcggc 84181 Score = 111 bits (56), Expect = 2e-21 Identities = 86/96 (89%) Strand = Plus / Plus Query: 145 tccagccgctgtccaagatcgccatccacaaggccaccgtggaactgcacggctccgcgt 204 ||||||||||||| ||||||||| |||||||||||||||| || || ||||||||||||| Sbjct: 82080 tccagccgctgtcgaagatcgccgtccacaaggccaccgtcgacctccacggctccgcgt 82139 Query: 205 acgtgcgggcgacgccggcgttgctcggcgaccagg 240 ||| | || ||||||||||||||||||||||||| Sbjct: 82140 tcgtcagcgccacgccggcgttgctcggcgaccagg 82175 Score = 111 bits (56), Expect = 2e-21 Identities = 86/96 (89%) Strand = Plus / Plus Query: 145 tccagccgctgtccaagatcgccatccacaaggccaccgtggaactgcacggctccgcgt 204 ||||||||||||| ||||||||| |||||||||||||||| || || ||||||||||||| Sbjct: 77094 tccagccgctgtcgaagatcgccgtccacaaggccaccgtcgacctccacggctccgcgt 77153 Query: 205 acgtgcgggcgacgccggcgttgctcggcgaccagg 240 ||| | || ||||||||||||||||||||||||| Sbjct: 77154 tcgtcagcgccacgccggcgttgctcggcgaccagg 77189 Score = 81.8 bits (41), Expect = 2e-12 Identities = 68/77 (88%) Strand = Plus / Plus Query: 255 tgggtcaccgtgaaatacgggtgggagaacccttccgccgacgactggatcgccgtcttc 314 |||||||| ||||||||||| |||| ||||||||||| ||||||||||| || |||||| Sbjct: 83638 tgggtcacggtgaaatacggctgggcaaacccttccgctgacgactggattgctgtcttc 83697 Query: 315 tcccccgccgatttcat 331 || || ||||||||||| Sbjct: 83698 tctccggccgatttcat 83714
>dbj|AP004015.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1770_H02 Length = 170648 Score = 123 bits (62), Expect = 6e-25 Identities = 74/78 (94%) Strand = Plus / Plus Query: 432 tactggggcaagggcaccatccggttccagatcatcaaccagcgctccgacttctccttc 491 |||||||||||||||| ||||||||||||| ||||||||||||||| ||||||||||||| Sbjct: 164133 tactggggcaagggcagcatccggttccagctcatcaaccagcgctacgacttctccttc 164192 Query: 492 gccctcttcaccggcggc 509 ||||| |||||||||||| Sbjct: 164193 gccctgttcaccggcggc 164210 Score = 111 bits (56), Expect = 2e-21 Identities = 86/96 (89%) Strand = Plus / Plus Query: 145 tccagccgctgtccaagatcgccatccacaaggccaccgtggaactgcacggctccgcgt 204 ||||||||||||| ||||||||| |||||||||||||||| || || ||||||||||||| Sbjct: 162109 tccagccgctgtcgaagatcgccgtccacaaggccaccgtcgacctccacggctccgcgt 162168 Query: 205 acgtgcgggcgacgccggcgttgctcggcgaccagg 240 ||| | || ||||||||||||||||||||||||| Sbjct: 162169 tcgtcagcgccacgccggcgttgctcggcgaccagg 162204 Score = 111 bits (56), Expect = 2e-21 Identities = 86/96 (89%) Strand = Plus / Plus Query: 145 tccagccgctgtccaagatcgccatccacaaggccaccgtggaactgcacggctccgcgt 204 ||||||||||||| ||||||||| |||||||||||||||| || || ||||||||||||| Sbjct: 157123 tccagccgctgtcgaagatcgccgtccacaaggccaccgtcgacctccacggctccgcgt 157182 Query: 205 acgtgcgggcgacgccggcgttgctcggcgaccagg 240 ||| | || ||||||||||||||||||||||||| Sbjct: 157183 tcgtcagcgccacgccggcgttgctcggcgaccagg 157218 Score = 81.8 bits (41), Expect = 2e-12 Identities = 68/77 (88%) Strand = Plus / Plus Query: 255 tgggtcaccgtgaaatacgggtgggagaacccttccgccgacgactggatcgccgtcttc 314 |||||||| ||||||||||| |||| ||||||||||| ||||||||||| || |||||| Sbjct: 163667 tgggtcacggtgaaatacggctgggcaaacccttccgctgacgactggattgctgtcttc 163726 Query: 315 tcccccgccgatttcat 331 || || ||||||||||| Sbjct: 163727 tctccggccgatttcat 163743
>emb|CR522870.1| Desulfotalea psychrophila LSv54 chromosome Length = 3523383 Score = 48.1 bits (24), Expect = 0.031 Identities = 27/28 (96%) Strand = Plus / Minus Query: 82 tggcggcggtgctggccatggcggtagc 109 ||||||||||| |||||||||||||||| Sbjct: 2361259 tggcggcggtggtggccatggcggtagc 2361232 Score = 48.1 bits (24), Expect = 0.031 Identities = 27/28 (96%) Strand = Plus / Minus Query: 82 tggcggcggtgctggccatggcggtagc 109 ||||||||||| |||||||||||||||| Sbjct: 2353235 tggcggcggtggtggccatggcggtagc 2353208
>gb|AC011911.4| Drosophila melanogaster 3L BAC RP98-48J5 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 178394 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Minus Query: 92 gctggccatggcggtagcggcggcgacggtgg 123 |||||| |||||||||||||||||| |||||| Sbjct: 152801 gctggcgatggcggtagcggcggcggcggtgg 152770
>gb|AC093438.2| Drosophila melanogaster 3L BAC RP98-26C20 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 167344 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Minus Query: 92 gctggccatggcggtagcggcggcgacggtgg 123 |||||| |||||||||||||||||| |||||| Sbjct: 17955 gctggcgatggcggtagcggcggcggcggtgg 17924
>ref|NM_140314.2| Drosophila melanogaster GRHRII CG10698-RA (GRHRII), mRNA Length = 3238 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Plus Query: 92 gctggccatggcggtagcggcggcgacggtgg 123 |||||| |||||||||||||||||| |||||| Sbjct: 2277 gctggcgatggcggtagcggcggcggcggtgg 2308
>gb|AY071408.1| Drosophila melanogaster RE49422 full length cDNA Length = 3245 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Plus Query: 92 gctggccatggcggtagcggcggcgacggtgg 123 |||||| |||||||||||||||||| |||||| Sbjct: 2273 gctggcgatggcggtagcggcggcggcggtgg 2304
>gb|AE003541.3| Drosophila melanogaster chromosome 3L, section 44 of 83 of the complete sequence Length = 265524 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Minus Query: 92 gctggccatggcggtagcggcggcgacggtgg 123 |||||| |||||||||||||||||| |||||| Sbjct: 28993 gctggcgatggcggtagcggcggcggcggtgg 28962
>gb|AF373862.3| Drosophila melanogaster Drm corazonin receptor mRNA, complete cds Length = 3226 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Plus Query: 92 gctggccatggcggtagcggcggcgacggtgg 123 |||||| |||||||||||||||||| |||||| Sbjct: 2278 gctggcgatggcggtagcggcggcggcggtgg 2309
>gb|AY547502.1| Liparis atlanticus zona pellucida protein mRNA, complete cds Length = 1719 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 94 tggccatggcggtagcggcggcgacgg 120 |||||||||||| |||||||||||||| Sbjct: 219 tggccatggcggcagcggcggcgacgg 245
>gb|AC105345.3| Homo sapiens BAC clone RP11-689P11 from 4, complete sequence Length = 196902 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 17 gcagcaggaggagctgcctgccagtgc 43 |||||||| |||||||||||||||||| Sbjct: 39552 gcagcaggtggagctgcctgccagtgc 39578
>gb|CP000097.1| Synechococcus sp. CC9902, complete genome Length = 2234828 Score = 44.1 bits (22), Expect = 0.48 Identities = 37/42 (88%) Strand = Plus / Plus Query: 82 tggcggcggtgctggccatggcggtagcggcggcgacggtgg 123 ||||||||||| |||| | |||||| ||||||||| |||||| Sbjct: 17365 tggcggcggtggtggctacggcggtggcggcggcggcggtgg 17406
>gb|AC130711.3| Mus musculus BAC clone RP23-22M24 from chromosome 17, complete sequence Length = 226651 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 8 accccagtagcagcaggagga 28 ||||||||||||||||||||| Sbjct: 163759 accccagtagcagcaggagga 163739
>gb|AY358609.1| Homo sapiens clone DNA79862 carboxylesterase Hlo (UNQ869) mRNA, complete cds Length = 3824 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 17 gcagcaggaggagctgcctgccagt 41 |||||||| |||||||||||||||| Sbjct: 3324 gcagcaggtggagctgcctgccagt 3300
>emb|AL356115.9| Human DNA sequence from clone RP11-486O22 on chromosome 10 Contains the 3' end of a novel gene (KIAA1128, FLJ14262, FLJ25809) , the 5' end of a Siah-interacting protein (SIP) (calcyclin binding protein) pseudogene, ribosomal protein S3A pseudogene 5 (RPS3AP5) and two CpG islands, complete sequence Length = 150151 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 17 gcagcaggaggagctgcctgccagt 41 |||||||| |||||||||||||||| Sbjct: 147935 gcagcaggtggagctgcctgccagt 147911
>emb|AL050321.11|HSJ717M23 Human DNA sequence from clone RP4-717M23 on chromosome 20 Contains the CSRP2BP gene for CSRP2 binding protein, a chromosome 7 open reading frame 24 (C7orf24) pseudogene and two CpG islands, complete sequence Length = 101589 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 17 gcagcaggaggagctgcctgccagt 41 |||||||| |||||||||||||||| Sbjct: 93238 gcagcaggtggagctgcctgccagt 93214
>gb|AC011509.8| Homo sapiens chromosome 19 clone CTD-2189E23, complete sequence Length = 111998 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 17 gcagcaggaggagctgcctgccagt 41 |||||||| |||||||||||||||| Sbjct: 109022 gcagcaggtggagctgcctgccagt 108998
>gb|AC022706.7| Homo sapiens chromosome , clone RP11-47L3, complete sequence Length = 162474 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 17 gcagcaggaggagctgcctgccagt 41 |||||||| |||||||||||||||| Sbjct: 106489 gcagcaggtggagctgcctgccagt 106513
>gb|AC068299.21| Homo sapiens 3 BAC RP11-560F18 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 70466 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 17 gcagcaggaggagctgcctgccagt 41 |||||||| |||||||||||||||| Sbjct: 62786 gcagcaggtggagctgcctgccagt 62762
>gb|AC021127.9| Homo sapiens BAC clone RP11-377G16 from 4, complete sequence Length = 194158 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 17 gcagcaggaggagctgcctgccagt 41 |||||||| |||||||||||||||| Sbjct: 127170 gcagcaggtggagctgcctgccagt 127146
>gb|AC027131.6| Homo sapiens chromosome 16 clone RP11-317I8, complete sequence Length = 206102 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 17 gcagcaggaggagctgcctgccagt 41 |||||||| |||||||||||||||| Sbjct: 173263 gcagcaggtggagctgcctgccagt 173239
>gb|AC060766.8| Homo sapiens chromosome 17, clone RP11-686D22, complete sequence Length = 169675 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 17 gcagcaggaggagctgcctgccagt 41 |||||||| |||||||||||||||| Sbjct: 158789 gcagcaggtggagctgcctgccagt 158765
>gb|AC008569.7| Homo sapiens chromosome 19 clone CTC-548K16, complete sequence Length = 227245 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 17 gcagcaggaggagctgcctgccagt 41 |||||||| |||||||||||||||| Sbjct: 12637 gcagcaggtggagctgcctgccagt 12613
>gb|BC102495.1| Bos taurus cDNA clone MGC:127406 IMAGE:7953737, complete cds Length = 2397 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 100 tggcggtagcggcggcgacgg 120 ||||||||||||||||||||| Sbjct: 65 tggcggtagcggcggcgacgg 45
>gb|AC009084.9| Homo sapiens chromosome 16 clone RP11-361L15, complete sequence Length = 183864 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 17 gcagcaggaggagctgcctgccagt 41 |||||||| |||||||||||||||| Sbjct: 89504 gcagcaggtggagctgcctgccagt 89480
>gb|AC074182.6| Homo sapiens BAC clone RP11-553G13 from 2, complete sequence Length = 190436 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 17 gcagcaggaggagctgcctgccagt 41 |||||||| |||||||||||||||| Sbjct: 42893 gcagcaggtggagctgcctgccagt 42917
>ref|NM_024922.3| Homo sapiens esterase 31 (FLJ21736), mRNA Length = 3906 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 17 gcagcaggaggagctgcctgccagt 41 |||||||| |||||||||||||||| Sbjct: 3392 gcagcaggtggagctgcctgccagt 3368
>gb|AC138646.3| Homo sapiens chromosome 8, clone RP11-1114I9, complete sequence Length = 148013 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 17 gcagcaggaggagctgcctgccagt 41 |||||||| |||||||||||||||| Sbjct: 8238 gcagcaggtggagctgcctgccagt 8214
>gb|AC100870.6| Homo sapiens chromosome 8, clone RP11-758H6, complete sequence Length = 188873 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 17 gcagcaggaggagctgcctgccagt 41 |||||||| |||||||||||||||| Sbjct: 42072 gcagcaggtggagctgcctgccagt 42096
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 289 ccgccgacgactggatcgccg 309 ||||||||||||||||||||| Sbjct: 4402791 ccgccgacgactggatcgccg 4402771
>dbj|AK025389.1| Homo sapiens cDNA: FLJ21736 fis, clone COLF3353 Length = 3196 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 17 gcagcaggaggagctgcctgccagt 41 |||||||| |||||||||||||||| Sbjct: 2681 gcagcaggtggagctgcctgccagt 2657
>dbj|AK025171.1| Homo sapiens cDNA: FLJ21518 fis, clone COL05835 Length = 1703 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 17 gcagcaggaggagctgcctgccagt 41 |||||||| |||||||||||||||| Sbjct: 1261 gcagcaggtggagctgcctgccagt 1237
>dbj|AK025158.1| Homo sapiens cDNA: FLJ21505 fis, clone COL05708 Length = 2494 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 17 gcagcaggaggagctgcctgccagt 41 |||||||| |||||||||||||||| Sbjct: 1980 gcagcaggtggagctgcctgccagt 1956
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 81 ctggcggcggtgctggccatg 101 ||||||||||||||||||||| Sbjct: 1724274 ctggcggcggtgctggccatg 1724294
>gb|AC007450.1| Homo sapiens 12 BAC RP11-434C1 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 210779 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 20 gcaggaggagctgcctgccagtgcg 44 ||||| ||||||||||||||||||| Sbjct: 147707 gcaggtggagctgcctgccagtgcg 147731
>dbj|AP003534.1| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1554H10 Length = 194091 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 17 gcagcaggaggagctgcctgccagt 41 |||||||| |||||||||||||||| Sbjct: 60024 gcagcaggtggagctgcctgccagt 60048
>gb|BC103753.1| Homo sapiens RNA binding protein, autoantigenic (hnRNP-associated with lethal yellow homolog (mouse)), transcript variant 1, mRNA (cDNA clone MGC:117312 IMAGE:6182358), complete cds Length = 1614 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 101 ggcggtagcggcggcgacgg 120 |||||||||||||||||||| Sbjct: 71 ggcggtagcggcggcgacgg 90
>gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome Length = 3730232 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 489 ttcgccctcttcaccggcgg 508 |||||||||||||||||||| Sbjct: 2335116 ttcgccctcttcaccggcgg 2335135
>ref|XM_481802.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3348 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 493 ccctcttcaccggcggcttc 512 |||||||||||||||||||| Sbjct: 302 ccctcttcaccggcggcttc 321
>ref|NM_186617.2| Oryza sativa (japonica cultivar-group), mRNA Length = 2691 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 482 cttctccttcgccctcttca 501 |||||||||||||||||||| Sbjct: 1009 cttctccttcgccctcttca 1028
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 101 ggcggtagcggcggcgacgg 120 |||||||||||||||||||| Sbjct: 3731747 ggcggtagcggcggcgacgg 3731728 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 101 ggcggtagcggcggcgacgg 120 |||||||||||||||||||| Sbjct: 2691051 ggcggtagcggcggcgacgg 2691070
>gb|AC127415.3| Mus musculus BAC clone RP23-450L4 from chromosome 19, complete sequence Length = 177302 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 460 agatcatcaaccagcgctcc 479 |||||||||||||||||||| Sbjct: 40181 agatcatcaaccagcgctcc 40200
>gb|AF165141.4| Homo sapiens chromosome 8 clone XX-224L15 map 8q21.13, complete sequence Length = 46919 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 513 gaaaatccgaaacttgtggc 532 |||||||||||||||||||| Sbjct: 39109 gaaaatccgaaacttgtggc 39090
>gb|AC084697.4| Homo sapiens chromosome 8 clone XX-6L9 map q21.13, complete sequence Length = 107517 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 513 gaaaatccgaaacttgtggc 532 |||||||||||||||||||| Sbjct: 64173 gaaaatccgaaacttgtggc 64154
>ref|XM_809949.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053506957.70) partial mRNA Length = 1830 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 3 cttggaccccagtagcagcaggag 26 |||||||||||||||||| ||||| Sbjct: 1711 cttggaccccagtagcagaaggag 1688
>ref|XM_814540.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053511001.140) partial mRNA Length = 1824 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 3 cttggaccccagtagcagcaggag 26 |||||||||||||||||| ||||| Sbjct: 1705 cttggaccccagtagcagaaggag 1682
>ref|NM_016732.1| Homo sapiens RNA binding protein, autoantigenic (hnRNP-associated with lethal yellow homolog (mouse)) (RALY), transcript variant 1, mRNA Length = 1589 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 101 ggcggtagcggcggcgacgg 120 |||||||||||||||||||| Sbjct: 50 ggcggtagcggcggcgacgg 69
>ref|NM_007367.2| Homo sapiens RNA binding protein, autoantigenic (hnRNP-associated with lethal yellow homolog (mouse)) (RALY), transcript variant 2, mRNA Length = 1541 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 101 ggcggtagcggcggcgacgg 120 |||||||||||||||||||| Sbjct: 50 ggcggtagcggcggcgacgg 69
>gb|AY123844.1| Sorghum bicolor glutamate/malate translocator (DiT1) mRNA, complete cds; nuclear gene for plastid product Length = 2088 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 80 cctggcggcggtgctggccatggc 103 ||||||||||||||||| |||||| Sbjct: 732 cctggcggcggtgctgggcatggc 709
>ref|XM_786521.1| PREDICTED: Strongylocentrotus purpuratus similar to ubiquitin specific protease 9, X-linked isoform 2 (LOC586751), mRNA Length = 7677 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 390 cctatcaagtatcagtacgc 409 |||||||||||||||||||| Sbjct: 6481 cctatcaagtatcagtacgc 6500
>emb|AL499626.5| Human DNA sequence from clone RP3-381A2 on chromosome 6, complete sequence Length = 43657 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 20 gcaggaggagctgcctgccagtgc 43 ||||| |||||||||||||||||| Sbjct: 13162 gcaggtggagctgcctgccagtgc 13185
>emb|AL160412.14| Human DNA sequence from clone RP5-827E24 on chromosome 20 Contains ESTs, STSs and GSSs, complete sequence Length = 111824 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 cagcaggaggagctgcctgc 37 |||||||||||||||||||| Sbjct: 110035 cagcaggaggagctgcctgc 110054
>emb|AL034549.19|HS1125A11 Human DNA sequence from clone RP5-1125A11 on chromosome 20q11.1-11.23 Contains the TPM5P gene for tropomyosin 5 pseudogene, a novel gene, the 3' end of a novel gene, the 5' end of the RALY gene for RNA binding protein (autoantigenic, hnRNP-associated with lethal yellow), a Down syndrome critical region gene 5 (DSCR5) pseudogene and two CpG islands, complete sequence Length = 155567 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 101 ggcggtagcggcggcgacgg 120 |||||||||||||||||||| Sbjct: 133228 ggcggtagcggcggcgacgg 133247
>ref|XM_969045.1| PREDICTED: Tribolium castaneum similar to CG32498-PO, isoform O (LOC662977), mRNA Length = 3393 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 482 cttctccttcgccctcttca 501 |||||||||||||||||||| Sbjct: 3370 cttctccttcgccctcttca 3351
>gb|BT023798.1| Drosophila melanogaster AT19083 full insert cDNA Length = 893 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 agcagcaggaggagctgcct 35 |||||||||||||||||||| Sbjct: 329 agcagcaggaggagctgcct 310
>gb|AC131386.2| Homo sapiens chromosome 5 clone CTD-3179P9, complete sequence Length = 169076 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 20 gcaggaggagctgcctgccagtgc 43 ||||| |||||||||||||||||| Sbjct: 30893 gcaggcggagctgcctgccagtgc 30916
>gb|AC090255.4| Homo sapiens chromosome 8, clone RP11-34M16, complete sequence Length = 145705 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 513 gaaaatccgaaacttgtggc 532 |||||||||||||||||||| Sbjct: 50786 gaaaatccgaaacttgtggc 50767
>emb|BX842582.1| Mycobacterium tuberculosis H37Rv complete genome; segment 11/13 Length = 349563 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 101 ggcggtagcggcggcgacgg 120 |||||||||||||||||||| Sbjct: 271742 ggcggtagcggcggcgacgg 271723
>emb|BX842579.1| Mycobacterium tuberculosis H37Rv complete genome; segment 8/13 Length = 348247 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 101 ggcggtagcggcggcgacgg 120 |||||||||||||||||||| Sbjct: 268881 ggcggtagcggcggcgacgg 268900
>emb|BX640444.1| Bordetella bronchiseptica strain RB50, complete genome; segment 8/16 Length = 349008 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 81 ctggcggcggtgctggccatggcg 104 ||||||||| |||||||||||||| Sbjct: 336843 ctggcggcgatgctggccatggcg 336866
>emb|BX640427.1| Bordetella parapertussis strain 12822, complete genome; segment 5/14 Length = 348997 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 81 ctggcggcggtgctggccatggcg 104 ||||||||| |||||||||||||| Sbjct: 244677 ctggcggcgatgctggccatggcg 244700
>emb|BX640415.1| Bordetella pertussis strain Tohama I, complete genome; segment 5/12 Length = 347071 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 81 ctggcggcggtgctggccatggcg 104 ||||||||| |||||||||||||| Sbjct: 111953 ctggcggcgatgctggccatggcg 111976
>emb|BX248345.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 12/14 Length = 308050 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 101 ggcggtagcggcggcgacgg 120 |||||||||||||||||||| Sbjct: 249784 ggcggtagcggcggcgacgg 249765
>emb|BX248342.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 9/14 Length = 306550 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 101 ggcggtagcggcggcgacgg 120 |||||||||||||||||||| Sbjct: 150789 ggcggtagcggcggcgacgg 150808
>gb|AC021621.9| Homo sapiens chromosome 8, clone RP11-356M23, complete sequence Length = 186114 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 18 cagcaggaggagctgcctgccagt 41 ||||||| |||||||||||||||| Sbjct: 81650 cagcaggtggagctgcctgccagt 81673
>gb|AC099484.4| Homo sapiens chromosome 5 clone CTD-2004P1, complete sequence Length = 134760 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 20 gcaggaggagctgcctgccagtgc 43 ||||| |||||||||||||||||| Sbjct: 122521 gcaggtggagctgcctgccagtgc 122498
>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome Length = 2932766 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 cttcctggcggcggtgctgg 96 |||||||||||||||||||| Sbjct: 2877020 cttcctggcggcggtgctgg 2877039
>emb|CR625534.1| full-length cDNA clone CS0DF038YF22 of Fetal brain of Homo sapiens (human) Length = 1706 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 101 ggcggtagcggcggcgacgg 120 |||||||||||||||||||| Sbjct: 232 ggcggtagcggcggcgacgg 251
>emb|CR623780.1| full-length cDNA clone CS0DC003YF16 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1434 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 101 ggcggtagcggcggcgacgg 120 |||||||||||||||||||| Sbjct: 52 ggcggtagcggcggcgacgg 71
>emb|CR622300.1| full-length cDNA clone CS0DC003YJ22 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1433 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 101 ggcggtagcggcggcgacgg 120 |||||||||||||||||||| Sbjct: 52 ggcggtagcggcggcgacgg 71
>emb|CR620280.1| full-length cDNA clone CS0DL002YO08 of B cells (Ramos cell line) Cot 25-normalized of Homo sapiens (human) Length = 1547 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 101 ggcggtagcggcggcgacgg 120 |||||||||||||||||||| Sbjct: 53 ggcggtagcggcggcgacgg 72
>emb|CR617105.1| full-length cDNA clone CS0DI075YL22 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1501 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 101 ggcggtagcggcggcgacgg 120 |||||||||||||||||||| Sbjct: 53 ggcggtagcggcggcgacgg 72
>emb|CR615528.1| full-length cDNA clone CS0DI063YA17 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1516 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 101 ggcggtagcggcggcgacgg 120 |||||||||||||||||||| Sbjct: 16 ggcggtagcggcggcgacgg 35
>emb|CR615132.1| full-length cDNA clone CS0DI081YO16 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1553 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 101 ggcggtagcggcggcgacgg 120 |||||||||||||||||||| Sbjct: 53 ggcggtagcggcggcgacgg 72
>emb|CR614904.1| full-length cDNA clone CS0DF007YF13 of Fetal brain of Homo sapiens (human) Length = 1574 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 101 ggcggtagcggcggcgacgg 120 |||||||||||||||||||| Sbjct: 79 ggcggtagcggcggcgacgg 98
>emb|CR613686.1| full-length cDNA clone CS0DK010YB22 of HeLa cells Cot 25-normalized of Homo sapiens (human) Length = 1667 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 101 ggcggtagcggcggcgacgg 120 |||||||||||||||||||| Sbjct: 190 ggcggtagcggcggcgacgg 209
>emb|CR613485.1| full-length cDNA clone CS0DK005YP23 of HeLa cells Cot 25-normalized of Homo sapiens (human) Length = 1791 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 101 ggcggtagcggcggcgacgg 120 |||||||||||||||||||| Sbjct: 297 ggcggtagcggcggcgacgg 316
>emb|CR609461.1| full-length cDNA clone CS0DK006YE09 of HeLa cells Cot 25-normalized of Homo sapiens (human) Length = 1713 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 101 ggcggtagcggcggcgacgg 120 |||||||||||||||||||| Sbjct: 238 ggcggtagcggcggcgacgg 257
>emb|CR612346.1| full-length cDNA clone CS0DA008YF04 of Neuroblastoma of Homo sapiens (human) Length = 1694 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 101 ggcggtagcggcggcgacgg 120 |||||||||||||||||||| Sbjct: 199 ggcggtagcggcggcgacgg 218
>emb|CR606402.1| full-length cDNA clone CS0DI064YN17 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1501 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 101 ggcggtagcggcggcgacgg 120 |||||||||||||||||||| Sbjct: 6 ggcggtagcggcggcgacgg 25
>emb|CR604151.1| full-length cDNA clone CS0DI007YH05 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1744 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 101 ggcggtagcggcggcgacgg 120 |||||||||||||||||||| Sbjct: 269 ggcggtagcggcggcgacgg 288
>emb|CR603257.1| full-length cDNA clone CS0DB001YP12 of Neuroblastoma Cot 10-normalized of Homo sapiens (human) Length = 1694 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 101 ggcggtagcggcggcgacgg 120 |||||||||||||||||||| Sbjct: 201 ggcggtagcggcggcgacgg 220
>emb|CR600862.1| full-length cDNA clone CS0DI064YP08 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1479 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 101 ggcggtagcggcggcgacgg 120 |||||||||||||||||||| Sbjct: 13 ggcggtagcggcggcgacgg 32
>emb|CR599587.1| full-length cDNA clone CS0DI033YM20 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1495 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 101 ggcggtagcggcggcgacgg 120 |||||||||||||||||||| Sbjct: 52 ggcggtagcggcggcgacgg 71
>emb|CR599150.1| full-length cDNA clone CS0DA010YJ20 of Neuroblastoma of Homo sapiens (human) Length = 1769 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 101 ggcggtagcggcggcgacgg 120 |||||||||||||||||||| Sbjct: 263 ggcggtagcggcggcgacgg 282
>emb|CR597090.1| full-length cDNA clone CS0DK010YO17 of HeLa cells Cot 25-normalized of Homo sapiens (human) Length = 1548 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 101 ggcggtagcggcggcgacgg 120 |||||||||||||||||||| Sbjct: 53 ggcggtagcggcggcgacgg 72
>emb|CR596751.1| full-length cDNA clone CS0DC028YL10 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1593 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 101 ggcggtagcggcggcgacgg 120 |||||||||||||||||||| Sbjct: 112 ggcggtagcggcggcgacgg 131
>emb|CR596021.1| full-length cDNA clone CS0DI057YH17 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1533 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 101 ggcggtagcggcggcgacgg 120 |||||||||||||||||||| Sbjct: 23 ggcggtagcggcggcgacgg 42
>emb|CR595464.1| full-length cDNA clone CS0DM001YD17 of Fetal liver of Homo sapiens (human) Length = 1577 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 101 ggcggtagcggcggcgacgg 120 |||||||||||||||||||| Sbjct: 99 ggcggtagcggcggcgacgg 118
>gb|AC099340.3| Homo sapiens BAC clone RP11-214O14 from 4, complete sequence Length = 164958 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 20 gcaggaggagctgcctgccagtgc 43 ||||| |||||||||||||||||| Sbjct: 139407 gcaggtggagctgcctgccagtgc 139430
>ref|NM_165056.1| Drosophila melanogaster CG31845-PA (CG31845) mRNA, complete cds Length = 637 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 agcagcaggaggagctgcct 35 |||||||||||||||||||| Sbjct: 329 agcagcaggaggagctgcct 310
>gb|AC113344.2| Homo sapiens chromosome 5 clone CTD-2382P15, complete sequence Length = 128990 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 20 gcaggaggagctgcctgccagtgc 43 ||||| |||||||||||||||||| Sbjct: 110923 gcaggcggagctgcctgccagtgc 110946
>gb|CP000232.1| Moorella thermoacetica ATCC 39073, complete genome Length = 2628784 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 tcctggcggcggtgctggcc 98 |||||||||||||||||||| Sbjct: 1592031 tcctggcggcggtgctggcc 1592012
>gb|AC092506.3| Homo sapiens chromosome 1 clone RP11-364B6, complete sequence Length = 198279 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 20 gcaggaggagctgcctgccagtgc 43 ||||| |||||||||||||||||| Sbjct: 36793 gcaggtggagctgcctgccagtgc 36770
>gb|AC092236.1|AC092236 Drosophila melanogaster, chromosome 2L, region 34D-34D, BAC clone BACR30I21, complete sequence Length = 161682 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 agcagcaggaggagctgcct 35 |||||||||||||||||||| Sbjct: 107514 agcagcaggaggagctgcct 107495
>tpg|BK000093.1| TPA: TPA_exp: Oryza sativa cellulose synthase-like D3 gene, complete cds Length = 5547 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 493 ccctcttcaccggcggcttc 512 |||||||||||||||||||| Sbjct: 1298 ccctcttcaccggcggcttc 1317
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 482 cttctccttcgccctcttca 501 |||||||||||||||||||| Sbjct: 6784941 cttctccttcgccctcttca 6784922
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 100 tggcggtagcggcggcgacggtgg 123 |||||| ||||||||||||||||| Sbjct: 22849506 tggcggcagcggcggcgacggtgg 22849483
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 89 ggtgctggccatggcggtagcggcggcg 116 ||||||||||||||||| ||||||||| Sbjct: 3596104 ggtgctggccatggcggcggcggcggcg 3596131
>gb|AC021301.6|AC021301 Homo sapiens chromosome 8, clone RP11-411P7, complete sequence Length = 140765 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 18 cagcaggaggagctgcctgccagt 41 ||||||| |||||||||||||||| Sbjct: 70947 cagcaggtggagctgcctgccagt 70970
>gb|AC005798.10|AC005798 Homo sapiens chromosome 4 clone RP11-442P12, complete sequence Length = 206631 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 18 cagcaggaggagctgcctgccagt 41 ||||||| |||||||||||||||| Sbjct: 154667 cagcaggcggagctgcctgccagt 154644
>dbj|AK222915.1| Homo sapiens mRNA for RNA binding protein (autoantigenic, hnRNP-associated with lethal yellow) long isoform variant, clone: HRC04171 Length = 1553 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 101 ggcggtagcggcggcgacgg 120 |||||||||||||||||||| Sbjct: 10 ggcggtagcggcggcgacgg 29
>ref|XM_577500.1| PREDICTED: Rattus norvegicus GTP binding protein 3 (predicted) (Gtpbp3_predicted), mRNA Length = 1602 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 16 agcagcaggaggagctgcctgcca 39 |||||||||||| ||||||||||| Sbjct: 1238 agcagcaggaggcgctgcctgcca 1215
>gb|AC010000.5|AC010000 Homo sapiens chromosome 8 clone RP11-34M16, complete sequence Length = 145588 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 513 gaaaatccgaaacttgtggc 532 |||||||||||||||||||| Sbjct: 50670 gaaaatccgaaacttgtggc 50651
>gb|AC114313.2| Homo sapiens chromosome 5 clone RP11-30D9, complete sequence Length = 109840 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 20 gcaggaggagctgcctgccagtgc 43 ||||| |||||||||||||||||| Sbjct: 10666 gcaggcggagctgcctgccagtgc 10689
>dbj|AP003617.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0502H06 Length = 165630 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 100 tggcggtagcggcggcgacggtgg 123 |||||| ||||||||||||||||| Sbjct: 24315 tggcggcagcggcggcgacggtgg 24292
>dbj|AP003622.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0633E08 Length = 136471 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 100 tggcggtagcggcggcgacggtgg 123 |||||| ||||||||||||||||| Sbjct: 136457 tggcggcagcggcggcgacggtgg 136434
>dbj|AP005197.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0592C06 Length = 160071 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 482 cttctccttcgccctcttca 501 |||||||||||||||||||| Sbjct: 79075 cttctccttcgccctcttca 79056
>dbj|AP004863.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0023I17 Length = 141852 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 89 ggtgctggccatggcggtagcggcggcg 116 ||||||||||||||||| ||||||||| Sbjct: 140899 ggtgctggccatggcggcggcggcggcg 140926
>dbj|AP005804.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0085K21 Length = 180714 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 89 ggtgctggccatggcggtagcggcggcg 116 ||||||||||||||||| ||||||||| Sbjct: 77394 ggtgctggccatggcggcggcggcggcg 77421
>dbj|AP004459.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0410E11 Length = 150200 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 493 ccctcttcaccggcggcttc 512 |||||||||||||||||||| Sbjct: 72552 ccctcttcaccggcggcttc 72533
>gb|AC006530.4|AC006530 Homo sapiens chromosome 14 clone BAC 316E14 map 14q24.3, complete sequence Length = 203010 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 20 gcaggaggagctgcctgccagtgc 43 ||||| |||||||||||||||||| Sbjct: 144955 gcaggtggagctgcctgccagtgc 144932
>emb|X87171.1|AHR15BCOP A.hypochondriacus mRNA for ribulose-1,5-bisphosphate carboxylase/oxygenase Length = 745 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 82 tggcggcggtgctggccatggcgg 105 ||||||||||| |||||||||||| Sbjct: 96 tggcggcggtggtggccatggcgg 73
>dbj|AK107502.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-129-E02, full insert sequence Length = 2691 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 482 cttctccttcgccctcttca 501 |||||||||||||||||||| Sbjct: 1009 cttctccttcgccctcttca 1028
>gb|AF176570.1|AF176570 Alternaria alternata endoxylanase (F1) mRNA, complete cds Length = 1464 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 11 ccagtagcagcaggaggagc 30 |||||||||||||||||||| Sbjct: 221 ccagtagcagcaggaggagc 202
>gb|AF148457.1|AF148457 Homo sapiens heterogeneous nuclear ribonucleoprotein, alternate transcript (RALY) mRNA, complete cds Length = 1589 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 101 ggcggtagcggcggcgacgg 120 |||||||||||||||||||| Sbjct: 50 ggcggtagcggcggcgacgg 69
>dbj|AK061129.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-207-H06, full insert sequence Length = 774 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 100 tggcggtagcggcggcgacggtgg 123 |||||| ||||||||||||||||| Sbjct: 421 tggcggcagcggcggcgacggtgg 398
>gb|AF150665.1|AF150665 Amaranthus hypochondriacus ribulose 1,5 bisphosphate carboxylase small subunit precursor (Rbcs1) mRNA, complete cds Length = 728 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 82 tggcggcggtgctggccatggcgg 105 ||||||||||| |||||||||||| Sbjct: 96 tggcggcggtggtggccatggcgg 73
>gb|AE003641.3| Drosophila melanogaster chromosome 2L, section 50 of 83 of the complete sequence Length = 304772 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 agcagcaggaggagctgcct 35 |||||||||||||||||||| Sbjct: 124029 agcagcaggaggagctgcct 124010
>gb|BC087083.1| Rattus norvegicus GTP binding protein 3, mRNA (cDNA clone MGC:94548 IMAGE:7189218), complete cds Length = 2418 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 16 agcagcaggaggagctgcctgcca 39 |||||||||||| ||||||||||| Sbjct: 1165 agcagcaggaggcgctgcctgcca 1142
>ref|NM_001011919.1| Rattus norvegicus GTP binding protein 3 (Gtpbp3), mRNA Length = 2418 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 16 agcagcaggaggagctgcctgcca 39 |||||||||||| ||||||||||| Sbjct: 1165 agcagcaggaggcgctgcctgcca 1142
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 77 cttcctggcggcggtgctgg 96 |||||||||||||||||||| Sbjct: 2000432 cttcctggcggcggtgctgg 2000413
>gb|AD000010.1|MSGY222 Mycobacterium tuberculosis sequence from clone y222 Length = 41156 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 101 ggcggtagcggcggcgacgg 120 |||||||||||||||||||| Sbjct: 37868 ggcggtagcggcggcgacgg 37887 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,338,906 Number of Sequences: 3902068 Number of extensions: 3338906 Number of successful extensions: 82691 Number of sequences better than 10.0: 126 Number of HSP's better than 10.0 without gapping: 127 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 81408 Number of HSP's gapped (non-prelim): 1283 length of query: 549 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 526 effective length of database: 17,143,297,704 effective search space: 9017374592304 effective search space used: 9017374592304 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)