Clone Information

BLAST Search Result

Clone Name	bart44g07
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	MDM2_MOUSE (P23804) Ubiquitin-protein ligase E3 Mdm2 (EC 6.3.2.-...	35	0.11
2	SMRC2_HUMAN (Q8TAQ2) SWI/SNF-related matrix-associated actin-dep...	34	0.19
3	RBM16_HUMAN (Q9UPN6) Putative RNA-binding protein 16 (RNA-bindin...	33	0.33
4	IRX5_MOUSE (Q9JKQ4) Iroquois-class homeodomain protein IRX-5 (Ir...	33	0.33
5	Y4762_ARATH (Q8RY73) Protein At4g17620, chloroplast precursor	32	0.56
6	RRP3_USTMA (Q4P3U9) ATP-dependent rRNA helicase RRP3 (EC 3.6.1.-)	32	0.56
7	YO073_YEAST (Q08232) Uncharacterized protein YOL073C	32	0.73
8	IE68_PRVKA (P24827) Immediate-early protein RSP40	32	0.73
9	SRCH_RABIT (P16230) Sarcoplasmic reticulum histidine-rich calciu...	32	0.95
10	SYV_HALMA (Q5V1H0) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--t...	32	0.95
11	GUN1_ACICE (P54583) Endoglucanase E1 precursor (EC 3.2.1.4) (End...	31	1.6
12	R51A1_MOUSE (Q8C551) RAD51-associated protein 1 (RAD51-interacti...	31	1.6
13	PTMS_BOVIN (P08814) Parathymosin	31	1.6
14	YB02_YEAST (P38282) Protein YBR152W	30	2.1
15	PGCA_PIG (Q29011) Aggrecan core protein (Cartilage-specific prot...	30	2.1
16	CEC1_CAEEL (P34618) Chromo domain protein cec-1	30	2.1
17	R1AB_CVM2 (Q9PYA3) Replicase polyprotein 1ab (pp1ab) (ORF1ab pol...	30	2.1
18	DAN4_YEAST (P47179) Cell wall protein DAN4 precursor	30	2.8
19	PTMA_HUMAN (P06454) Prothymosin alpha [Contains: Thymosin alpha-1]	30	3.6
20	RSA3_CANGA (Q6FX31) Ribosome assembly protein 3	30	3.6
21	DSPP_HUMAN (Q9NZW4) Dentin sialophosphoprotein precursor [Contai...	30	3.6
22	CWC22_MAGGR (Q52B63) Pre-mRNA-splicing factor CWC22	30	3.6
23	IL16_MACMU (O62675) Interleukin-16 precursor (IL-16) (Lymphocyte...	30	3.6
24	IL16_MACFA (O62676) Interleukin-16 precursor (IL-16) (Lymphocyte...	30	3.6
25	IL16_CERAE (O62674) Interleukin-16 precursor (IL-16) (Lymphocyte...	30	3.6
26	PTPRG_HUMAN (P23470) Receptor-type tyrosine-protein phosphatase ...	30	3.6
27	PTMS_RAT (P04550) Parathymosin (Zinc-binding 11.5 kDa protein)	30	3.6
28	DYHC_PARTE (Q27171) Dynein heavy chain, cytosolic (DYHC) (DHC08)	30	3.6
29	SP70_DICDI (P15269) Spore coat protein SP70 precursor (Beejin pr...	29	4.7
30	YQ38_CAEEL (Q09459) Hypothetical protein C09G5.8	29	4.7
31	UBQL3_HUMAN (Q9H347) Ubiquilin-3	29	4.7
32	HSH2D_HUMAN (Q96JZ2) Hematopoietic SH2 domain-containing protein...	29	4.7
33	DSPP_RAT (Q62598) Dentin sialophosphoprotein precursor [Contains...	29	4.7
34	PTMS_HUMAN (P20962) Parathymosin	29	4.7
35	POLR_KYMVJ (P36304) RNA replicase polyprotein (EC 2.7.7.48)	29	6.2
36	HYR1_CANAL (P46591) Hyphally-regulated protein precursor	29	6.2
37	NNP1_MOUSE (P56183) NNP-1 protein (Novel nuclear protein 1) (Nop52)	29	6.2
38	MAP1B_HUMAN (P46821) Microtubule-associated protein 1B (MAP 1B) ...	29	6.2
39	PGCA_BOVIN (P13608) Aggrecan core protein precursor (Cartilage-s...	29	6.2
40	NCKX1_HUMAN (O60721) Sodium/potassium/calcium exchanger 1 (Na(+)...	29	6.2
41	IL16_AOTTR (O62678) Interleukin-16 precursor (IL-16) (Lymphocyte...	29	6.2
42	IL16_SAISC (O62677) Interleukin-16 precursor (IL-16) (Lymphocyte...	29	6.2
43	IL16_PANTR (O62666) Interleukin-16 precursor (IL-16) (Lymphocyte...	29	6.2
44	IL16_HUMAN (Q14005) Interleukin-16 precursor (IL-16) (Lymphocyte...	29	6.2
45	DSPP_MOUSE (P97399) Dentin sialophosphoprotein precursor (Dentin...	29	6.2
46	PTMA_PONPY (Q5R790) Prothymosin alpha [Contains: Thymosin alpha]	28	8.1
47	FTSK_RHIME (Q92L89) DNA translocase ftsK	28	8.1
48	MIA40_ASHGO (Q757A5) Intermembrane space import and assembly pro...	28	8.1
49	KEX1_YEAST (P09620) Carboxypeptidase KEX1 precursor (EC 3.4.16.6...	28	8.1
50	TAF11_HUMAN (Q15544) Transcription initiation factor TFIID subun...	28	8.1
51	RELA_STRAT (O85709) GTP pyrophosphokinase (EC 2.7.6.5) (ATP:GTP ...	28	8.1
52	PDZK1_RAT (Q9JJ40) PDZ domain-containing protein 1 (Na/Pi cotran...	28	8.1
53	G16U_BACSU (P80875) General stress protein 16U (GSP16U)	28	8.1

>MDM2_MOUSE (P23804) Ubiquitin-protein ligase E3 Mdm2 (EC 6.3.2.-) (p53-binding|
           protein Mdm2) (Oncoprotein Mdm2) (Double minute 2
           protein)
          Length = 489

 Score = 34.7 bits (78), Expect = 0.11
 Identities = 27/82 (32%), Positives = 37/82 (45%)
 Frame = +3

Query: 186 PDDKGDHITELSGTVNAESSVGARSNNGVSEPLEAGDGNGDTEHDGSSATGHAEQTDDEP 365
           PDDKG    E+S     E+S  A       E L+  DG   TE+D       AE+  +E 
Sbjct: 329 PDDKGKDKVEISEKAKLENSAQA------EEGLDVPDGKKLTENDAKEPC--AEEDSEEK 380

Query: 366 AADEASPVNVEKGDVAQHGVES 431
           A  E +P++ E  D +Q    S
Sbjct: 381 A--EQTPLSQESDDYSQPSTSS 400

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>SMRC2_HUMAN (Q8TAQ2) SWI/SNF-related matrix-associated actin-dependent|
           regulator of chromatin subfamily C member 2 (SWI/SNF
           complex 170 kDa subunit) (BRG1-associated factor 170)
          Length = 1214

 Score = 33.9 bits (76), Expect = 0.19
 Identities = 25/81 (30%), Positives = 36/81 (44%)
 Frame = +3

Query: 165 SSDNMETPDDKGDHITELSGTVNAESSVGARSNNGVSEPLEAGDGNGDTEHDGSSATGHA 344
           SS    T  D+ + I E SG  N E+ V  ++ +   EP E  +G G  E +    T  A
Sbjct: 737 SSGIAGTTSDEPERIEE-SG--NDEARVEGQATDEKKEPKEPREGGGAIEEEAKEKTSEA 793

Query: 345 EQTDDEPAADEASPVNVEKGD 407
            + D+E   +  S    EK D
Sbjct: 794 PKKDEEKGKEGDSEKESEKSD 814

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>RBM16_HUMAN (Q9UPN6) Putative RNA-binding protein 16 (RNA-binding motif protein|
           16)
          Length = 1271

 Score = 33.1 bits (74), Expect = 0.33
 Identities = 17/61 (27%), Positives = 32/61 (52%), Gaps = 4/61 (6%)
 Frame = +3

Query: 279 PLEAGDGNGDTEHDGSSATGHAEQTDDEPAADEASPVNVEKGDV----AQHGVESRAYEQ 446
           P ++ +G   +EH  S + G ++Q   EP  +    +++++ D+     Q GVE   +EQ
Sbjct: 330 PQDSQEGTFGSEHSASPSQGSSQQHFLEPEVNLDDSIDIQQQDMDIDEGQDGVEEEVFEQ 389

Query: 447 E 449
           E
Sbjct: 390 E 390

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>IRX5_MOUSE (Q9JKQ4) Iroquois-class homeodomain protein IRX-5 (Iroquois|
           homeobox protein 5) (Homeodomain protein IRXB2)
          Length = 484

 Score = 33.1 bits (74), Expect = 0.33
 Identities = 22/84 (26%), Positives = 35/84 (41%), Gaps = 2/84 (2%)
 Frame = +3

Query: 171 DNMETPDDKGDHITELSGTVNAESSVGARSNNGVSEPL--EAGDGNGDTEHDGSSATGHA 344
           D  + P+DKGD     SG    +++ G     G   P   E      D++   SS+ G  
Sbjct: 201 DEPQKPEDKGDLEGPESGGAEQKATAGCERLQGPLSPAGKETEGSLSDSDFKESSSEGRH 260

Query: 345 EQTDDEPAADEASPVNVEKGDVAQ 416
           ++    P A E+SP       +A+
Sbjct: 261 DELPRPPRAGESSPAGPATARLAE 284

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>Y4762_ARATH (Q8RY73) Protein At4g17620, chloroplast precursor|
          Length = 544

 Score = 32.3 bits (72), Expect = 0.56
 Identities = 25/96 (26%), Positives = 39/96 (40%), Gaps = 14/96 (14%)
 Frame = +3

Query: 159 PPSSDNME------TPDDKGDHITELSGTVNAESSVGARSNNGVSEPLEAGDGNGD---- 308
           PP  + M+      + +D     ++ S + NA SS  + S++  S     GDG GD    
Sbjct: 4   PPKKNPMDDLFGEDSDNDSRSSRSKSSSSGNASSSSSSSSSSSSSSSAAGGDGEGDGGGA 63

Query: 309 ----TEHDGSSATGHAEQTDDEPAADEASPVNVEKG 404
                   GS ++G  E+  D+      S  N E G
Sbjct: 64  DSGSASDSGSGSSGGKEEHGDDKVESYRSNDNGESG 99

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>RRP3_USTMA (Q4P3U9) ATP-dependent rRNA helicase RRP3 (EC 3.6.1.-)|
          Length = 551

 Score = 32.3 bits (72), Expect = 0.56
 Identities = 23/87 (26%), Positives = 38/87 (43%), Gaps = 6/87 (6%)
 Frame = +3

Query: 165 SSDNMETPDDKGDHITELSGTVNAESSVGARSNNG------VSEPLEAGDGNGDTEHDGS 326
           S+ N+ + + K       S + + E S  + SN+       VSE +   +     EH  S
Sbjct: 4   STSNVSSSNSKLKKSKASSPSASPEVSTPSTSNSNDDQDGHVSEDMSDAEEGESQEHSAS 63

Query: 327 SATGHAEQTDDEPAADEASPVNVEKGD 407
            +       DD+P+AD+ SP   E+ D
Sbjct: 64  GSGISDHDDDDDPSADKDSPAADEEQD 90

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>YO073_YEAST (Q08232) Uncharacterized protein YOL073C|
          Length = 322

 Score = 32.0 bits (71), Expect = 0.73
 Identities = 23/81 (28%), Positives = 33/81 (40%), Gaps = 1/81 (1%)
 Frame = +3

Query: 159 PPSSDNMETPDDKGDHITELSGTVNAESSVGARSNNGVSEPLEAGDGNGDTEHDGSSATG 338
           PP+  N+    +   +      TV A ++     N G S P         T    +S+ G
Sbjct: 240 PPTRANVAIAANAATNTAAARATVEAATAATGNGNTGNSGPTSLPLRGSSTTPTNTSSAG 299

Query: 339 HAEQTDDEPAADE-ASPVNVE 398
                DDEP ADE A P+ V+
Sbjct: 300 -----DDEPGADEPARPLGVQ 315

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>IE68_PRVKA (P24827) Immediate-early protein RSP40|
          Length = 364

 Score = 32.0 bits (71), Expect = 0.73
 Identities = 28/96 (29%), Positives = 39/96 (40%), Gaps = 2/96 (2%)
 Frame = +3

Query: 168 SDNMETPDDKGDHITELSGTVNAESSVGARSNNGVSEPLEAG-DGNGDTEHDGSSATGHA 344
           +D  E  D+  D   E  G     +SVG   ++ V EP E G DG G    DG       
Sbjct: 246 TDVYEEDDEAEDEEDEEDGDDFDGASVG---DDDVFEPPEDGSDGEGSGSDDGGDGEDED 302

Query: 345 EQTDDEPAADEASPVNVEKG-DVAQHGVESRAYEQE 449
           E  D++   D+      E+G D  + G +    E E
Sbjct: 303 EDEDEDEDEDDGEDEEDEEGEDGGEDGEDGEEDEDE 338

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>SRCH_RABIT (P16230) Sarcoplasmic reticulum histidine-rich calcium-binding|
           protein precursor
          Length = 852

 Score = 31.6 bits (70), Expect = 0.95
 Identities = 20/80 (25%), Positives = 29/80 (36%)
 Frame = +3

Query: 180 ETPDDKGDHITELSGTVNAESSVGARSNNGVSEPLEAGDGNGDTEHDGSSATGHAEQTDD 359
           E  +D+ D  TE S    A    G R      +  + GD      H      GH E+ D+
Sbjct: 207 EDEEDEDDDSTE-SDRHQAHRHRGHREEEDEDDDDDEGDSTESDHHQAHRHRGHEEEEDE 265

Query: 360 EPAADEASPVNVEKGDVAQH 419
           E   DE      ++    +H
Sbjct: 266 EDDDDEGDSTESDRHQAHRH 285



 Score = 29.6 bits (65), Expect = 3.6
 Identities = 23/83 (27%), Positives = 32/83 (38%)
 Frame = +3

Query: 171 DNMETPDDKGDHITELSGTVNAESSVGARSNNGVSEPLEAGDGNGDTEHDGSSATGHAEQ 350
           ++ E  DD+GD  TE S    A    G R      +  E GD      H      GH E+
Sbjct: 263 EDEEDDDDEGDS-TE-SDRHQAHRHRGHREEEDEDDDDE-GDSTESDRHQAHRHRGHREE 319

Query: 351 TDDEPAADEASPVNVEKGDVAQH 419
            DD+   DE      ++    +H
Sbjct: 320 EDDDDDDDEGDSTESDRHQAHRH 342

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>SYV_HALMA (Q5V1H0) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)|
            (ValRS)
          Length = 901

 Score = 31.6 bits (70), Expect = 0.95
 Identities = 24/80 (30%), Positives = 38/80 (47%)
 Frame = +3

Query: 177  METPDDKGDHITELSGTVNAESSVGARSNNGVSEPLEAGDGNGDTEHDGSSATGHAEQTD 356
            ++T D+  D  TE+SG     S VG    + V   ++A   +GD E DG +      + D
Sbjct: 814  LDTYDEAPDITTEISGIDLDYSLVGPEFGSEVGA-IDAAIEDGDYEIDGDTLQVAGVELD 872

Query: 357  DEPAADEASPVNVEKGDVAQ 416
            DE  A E S     +G++ +
Sbjct: 873  DEMFAVEESRTYSGEGEMTE 892

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>GUN1_ACICE (P54583) Endoglucanase E1 precursor (EC 3.2.1.4)|
           (Endo-1,4-beta-glucanase E1) (Cellulase E1)
           (Endocellulase E1)
          Length = 562

 Score = 30.8 bits (68), Expect = 1.6
 Identities = 14/29 (48%), Positives = 18/29 (62%)
 Frame = -2

Query: 331 AEEPSCSVSPFPSPASNGSETPLLDRAPT 245
           + +PS SVSP PSP+ + S TP     PT
Sbjct: 406 SSQPSPSVSPSPSPSPSASRTPTPTPTPT 434

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>R51A1_MOUSE (Q8C551) RAD51-associated protein 1 (RAD51-interacting protein)|
           (RAB22)
          Length = 337

 Score = 30.8 bits (68), Expect = 1.6
 Identities = 21/88 (23%), Positives = 38/88 (43%), Gaps = 6/88 (6%)
 Frame = +3

Query: 159 PPSSDNMETPDDKGDHITELSGTVNAESSVGARSNNGVSE------PLEAGDGNGDTEHD 320
           PP   N     D  + + +++   +A S  G R +   ++      P E  DG+   + +
Sbjct: 122 PPRVSNCSVASDDVEDLDKITEEGDASSVEGERKSPSQAKAPRRRAPSEGSDGSSANDTE 181

Query: 321 GSSATGHAEQTDDEPAADEASPVNVEKG 404
             SATG   ++D  P  DE+   + + G
Sbjct: 182 SESATGEGSESD--PDFDESKESDEDFG 207

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>PTMS_BOVIN (P08814) Parathymosin|
          Length = 101

 Score = 30.8 bits (68), Expect = 1.6
 Identities = 20/73 (27%), Positives = 29/73 (39%), Gaps = 8/73 (10%)
 Frame = +3

Query: 192 DKGDHITELSGTVNAESSVGARSNNGVSEPLEAGDGNGDTEHDGSSATGHAEQTDDEPAA 371
           +K + + E +G    +  V     NG  E  E    +G+ E DG       E+ +DE  A
Sbjct: 18  EKKEKVEEKAGRKERKKEVVEEEENGAEEEEEETAEDGEEEDDGDEEDEEEEEEEDEGPA 77

Query: 372 --------DEASP 386
                   DEA P
Sbjct: 78  LVRAAEEEDEADP 90

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>YB02_YEAST (P38282) Protein YBR152W|
          Length = 291

 Score = 30.4 bits (67), Expect = 2.1
 Identities = 21/73 (28%), Positives = 34/73 (46%)
 Frame = +3

Query: 165 SSDNMETPDDKGDHITELSGTVNAESSVGARSNNGVSEPLEAGDGNGDTEHDGSSATGHA 344
           SS   E   D+   +TE S +++  S +G    NG  +     DG    E DGS      
Sbjct: 18  SSSADEEHPDQNVSLTEKSASLS-HSDLGGEILNGTGKNRTPNDGQESNESDGS------ 70

Query: 345 EQTDDEPAADEAS 383
            ++D+ P ++E+S
Sbjct: 71  PESDESPESEESS 83

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>PGCA_PIG (Q29011) Aggrecan core protein (Cartilage-specific proteoglycan|
           core protein) (CSPCP) (Fragments)
          Length = 537

 Score = 30.4 bits (67), Expect = 2.1
 Identities = 15/33 (45%), Positives = 18/33 (54%)
 Frame = -2

Query: 331 AEEPSCSVSPFPSPASNGSETPLLDRAPTELSA 233
           +EEP  S  PFPS   + SE P     P+ LSA
Sbjct: 485 SEEPFPSEEPFPSEKPSASEEPFPSEQPSTLSA 517

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>CEC1_CAEEL (P34618) Chromo domain protein cec-1|
          Length = 304

 Score = 30.4 bits (67), Expect = 2.1
 Identities = 15/50 (30%), Positives = 26/50 (52%)
 Frame = +3

Query: 300 NGDTEHDGSSATGHAEQTDDEPAADEASPVNVEKGDVAQHGVESRAYEQE 449
           + DT+ + SSA   ++  D+E   D+  PV  +K +V +   E  + E E
Sbjct: 125 DSDTDEEHSSADKKSKAEDEEEVEDDEEPVPKKKKEVQEEPEEEESVEGE 174

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>R1AB_CVM2 (Q9PYA3) Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein)|
           [Includes: Replicase polyprotein 1a (pp1a) (ORF1a)]
           [Contains: p28; p65; p210 (EC 3.4.22.-) (Papain-like
           proteinases 1/2) (PL1-PRO/PL2-PRO); Peptide HD2 (p44);
           3C-like proteinase (
          Length = 7124

 Score = 30.4 bits (67), Expect = 2.1
 Identities = 14/32 (43%), Positives = 22/32 (68%)
 Frame = -1

Query: 380 GFICSRLVIGLFSVASGGGTVMLSVSISITSF 285
           G++C +LV GLF+VA+GG T +  V   + +F
Sbjct: 665 GWLCYQLVNGLFAVANGGITFLSDVPELVKNF 696

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>DAN4_YEAST (P47179) Cell wall protein DAN4 precursor|
          Length = 1161

 Score = 30.0 bits (66), Expect = 2.8
 Identities = 20/83 (24%), Positives = 32/83 (38%)
 Frame = -2

Query: 427 STPCCATSPFSTLTGEXXXXXXXXXXXXAWPVAEEPSCSVSPFPSPASNGSETPLLDRAP 248
           +T   +T+P ++ T                  +  P+ S +P  S  S  S+T      P
Sbjct: 190 TTSTTSTTPTTSTTSTTPTTSTTSTTPTTSTTSTTPTTSTTPTTSTTSTTSQTSTKSTTP 249

Query: 247 TELSALTVPESSVIWSPLSSGVS 179
           T  S  T P +S   +P +S  S
Sbjct: 250 TTSSTSTTPTTST--TPTTSTTS 270

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>PTMA_HUMAN (P06454) Prothymosin alpha [Contains: Thymosin alpha-1]|
          Length = 110

 Score = 29.6 bits (65), Expect = 3.6
 Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 5/70 (7%)
 Frame = +3

Query: 168 SDNMETPDDKGDHITELSGTVNAESSVGARSNNG--VSEPLEAGDG---NGDTEHDGSSA 332
           ++N       G+   E +G   A++ V      G    E  E GDG   +GD + +  SA
Sbjct: 26  AENGRDAPANGNAENEENGEQEADNEVDEEEEEGGEEEEEEEEGDGEEEDGDEDEEAESA 85

Query: 333 TGHAEQTDDE 362
           TG     DDE
Sbjct: 86  TGKRAAEDDE 95

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>RSA3_CANGA (Q6FX31) Ribosome assembly protein 3|
          Length = 190

 Score = 29.6 bits (65), Expect = 3.6
 Identities = 17/65 (26%), Positives = 28/65 (43%), Gaps = 2/65 (3%)
 Frame = +3

Query: 255 RSNNGVSEPLEAGDGNGDTEHDGSSATGHAEQTDDEPAADEASPV--NVEKGDVAQHGVE 428
           +S N   +     +   D++   SSA    E T++E   D  SP+  +VE  D+     +
Sbjct: 13  KSTNRRRKKRRTAESESDSDSSSSSAASDIEMTNEEEKNDNNSPIISDVELSDLENESEK 72

Query: 429 SRAYE 443
              YE
Sbjct: 73  RDVYE 77

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>DSPP_HUMAN (Q9NZW4) Dentin sialophosphoprotein precursor [Contains: Dentin|
           phosphoprotein (Dentin phosphophoryn) (DPP); Dentin
           sialoprotein (DSP)]
          Length = 1253

 Score = 29.6 bits (65), Expect = 3.6
 Identities = 20/76 (26%), Positives = 34/76 (44%), Gaps = 3/76 (3%)
 Frame = +3

Query: 165 SSDNMETPDDKG---DHITELSGTVNAESSVGARSNNGVSEPLEAGDGNGDTEHDGSSAT 335
           S DN    D KG   D     S T N++S+     NNG  +  ++  G G ++   S ++
Sbjct: 498 SKDNGNGSDSKGAEDDDSDSTSDTNNSDSN--GNGNNGNDDNDKSDSGKGKSDSSDSDSS 555

Query: 336 GHAEQTDDEPAADEAS 383
             +  +D   ++D  S
Sbjct: 556 DSSNSSDSSDSSDSDS 571

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>CWC22_MAGGR (Q52B63) Pre-mRNA-splicing factor CWC22|
          Length = 907

 Score = 29.6 bits (65), Expect = 3.6
 Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 8/78 (10%)
 Frame = +3

Query: 189 DDKGDHITELSGTVNAESSVGA-------RSNNGVSEPLEAGD-GNGDTEHDGSSATGHA 344
           DD+  H  EL G ++A+  +           N    + L+A   G G    D S   G +
Sbjct: 359 DDQIKHFVELDGELDAQDGLNIFKFDPEYEENEEKYKKLKAEILGEGSDYEDDSDDEG-S 417

Query: 345 EQTDDEPAADEASPVNVE 398
           + +DDEPAA E   ++++
Sbjct: 418 DSSDDEPAAAEQKAMDIQ 435

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>IL16_MACMU (O62675) Interleukin-16 precursor (IL-16) (Lymphocyte|
           chemoattractant factor) (LCF)
          Length = 630

 Score = 29.6 bits (65), Expect = 3.6
 Identities = 19/56 (33%), Positives = 26/56 (46%)
 Frame = -2

Query: 337 PVAEEPSCSVSPFPSPASNGSETPLLDRAPTELSALTVPESSVIWSPLSSGVSMLS 170
           PV + PS     FP   S   ET LLD   ++L +++   SS +   L    S LS
Sbjct: 253 PVLKMPSQRARSFPLTRSQSCETKLLDEKTSKLYSISSQVSSAVMKSLLCLPSSLS 308

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>IL16_MACFA (O62676) Interleukin-16 precursor (IL-16) (Lymphocyte|
           chemoattractant factor) (LCF)
          Length = 630

 Score = 29.6 bits (65), Expect = 3.6
 Identities = 19/56 (33%), Positives = 26/56 (46%)
 Frame = -2

Query: 337 PVAEEPSCSVSPFPSPASNGSETPLLDRAPTELSALTVPESSVIWSPLSSGVSMLS 170
           PV + PS     FP   S   ET LLD   ++L +++   SS +   L    S LS
Sbjct: 253 PVLKMPSQRARSFPLTRSQSCETKLLDEKTSKLYSISSQVSSAVMKSLLCLPSSLS 308

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>IL16_CERAE (O62674) Interleukin-16 precursor (IL-16) (Lymphocyte|
           chemoattractant factor) (LCF)
          Length = 631

 Score = 29.6 bits (65), Expect = 3.6
 Identities = 19/56 (33%), Positives = 26/56 (46%)
 Frame = -2

Query: 337 PVAEEPSCSVSPFPSPASNGSETPLLDRAPTELSALTVPESSVIWSPLSSGVSMLS 170
           PV + PS     FP   S   ET LLD   ++L +++   SS +   L    S LS
Sbjct: 254 PVLKMPSQRARSFPLTRSQSCETKLLDEKTSKLYSISSQVSSAVMKSLLCLPSSLS 309

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>PTPRG_HUMAN (P23470) Receptor-type tyrosine-protein phosphatase gamma precursor|
           (EC 3.1.3.48) (Protein-tyrosine phosphatase gamma)
           (R-PTP-gamma)
          Length = 1445

 Score = 29.6 bits (65), Expect = 3.6
 Identities = 22/75 (29%), Positives = 30/75 (40%), Gaps = 2/75 (2%)
 Frame = +3

Query: 186 PDDKGDHITELSGTVNAESSVGARSNNGVSEPLEAGDGNGDTEHDGSSATGHA--EQTDD 359
           PD       +  GT   E    + S +G  E  E  DG  D+E    S   HA  E+   
Sbjct: 564 PDGDSSPTKDGEGTEEGEKDEKSESEDGEREHEE--DGEKDSEKKEKSGVTHAAEERNQT 621

Query: 360 EPAADEASPVNVEKG 404
           EP+   +SP    +G
Sbjct: 622 EPSPTPSSPNRTAEG 636

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>PTMS_RAT (P04550) Parathymosin (Zinc-binding 11.5 kDa protein)|
          Length = 101

 Score = 29.6 bits (65), Expect = 3.6
 Identities = 17/82 (20%), Positives = 33/82 (40%)
 Frame = +3

Query: 192 DKGDHITELSGTVNAESSVGARSNNGVSEPLEAGDGNGDTEHDGSSATGHAEQTDDEPAA 371
           +K D + E +G    +  V     NG  E  E    +G+ + +G       E+ +DE   
Sbjct: 18  EKKDKVEEKAGRKERKKEVVEEEENGAEEEEEETAEDGEDDDEGDEEDEEEEEEEDEGPV 77

Query: 372 DEASPVNVEKGDVAQHGVESRA 437
            + +    ++ D  +   E+ A
Sbjct: 78  RKRTAEEEDEADPKRQKTENGA 99

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>DYHC_PARTE (Q27171) Dynein heavy chain, cytosolic (DYHC) (DHC08)|
          Length = 4540

 Score = 29.6 bits (65), Expect = 3.6
 Identities = 13/41 (31%), Positives = 26/41 (63%), Gaps = 4/41 (9%)
 Frame = +1

Query: 130  RSWSWILPLSLHLAITW----KRRMIRVTI*RNFRALSTLK 240
            +S SW++  ++HLA +W    ++++ R+T   NFR   T++
Sbjct: 3990 KSGSWVMLKNVHLATSWLNDLEKKLFRLTPNANFRIFLTME 4030

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>SP70_DICDI (P15269) Spore coat protein SP70 precursor (Beejin protein)|
          Length = 537

 Score = 29.3 bits (64), Expect = 4.7
 Identities = 19/83 (22%), Positives = 27/83 (32%)
 Frame = +3

Query: 156 IPPSSDNMETPDDKGDHITELSGTVNAESSVGARSNNGVSEPLEAGDGNGDTEHDGSSAT 335
           + PSS +  +    G H T    T  + ++ G  +    S     G   G     G S T
Sbjct: 179 VSPSSSSSSSSSTTGSHTTTGGSTTGSHTTTGGSTTG--SHTTTGGSTTGSHTTTGGSTT 236

Query: 336 GHAEQTDDEPAADEASPVNVEKG 404
           G    T           VN  +G
Sbjct: 237 GSHTTTGGSTTGPTCGNVNCPRG 259

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>YQ38_CAEEL (Q09459) Hypothetical protein C09G5.8|
          Length = 1531

 Score = 29.3 bits (64), Expect = 4.7
 Identities = 24/82 (29%), Positives = 35/82 (42%), Gaps = 9/82 (10%)
 Frame = +3

Query: 183 TPDDKGDHITELSGTVNA---------ESSVGARSNNGVSEPLEAGDGNGDTEHDGSSAT 335
           T  +K D ITEL  T+           +SS   R +   S    + + N D E   S   
Sbjct: 349 TLKNKNDEITELKYTIEKLRQLKSSVNQSSPPTRLSTSSSSKSSSSNNNNDGEGKDSELE 408

Query: 336 GHAEQTDDEPAADEASPVNVEK 401
             +E +DDE  +  ++PV  EK
Sbjct: 409 EMSEMSDDE--SGRSTPVIEEK 428

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>UBQL3_HUMAN (Q9H347) Ubiquilin-3|
          Length = 655

 Score = 29.3 bits (64), Expect = 4.7
 Identities = 22/69 (31%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
 Frame = +3

Query: 156 IPPSSDNMETPDDKGDHITELSGTVNAESSVGARSNNGVSEPLEAGDGNG-DTEHDGSSA 332
           +PPSS + + P   G  + E S  +   SS  A     +  P E   G G D +  G S+
Sbjct: 380 VPPSSPSSQEPGS-GQPLPEESVAIKGRSSCPAF----LRYPTENSTGQGGDQDGAGKSS 434

Query: 333 TGHAEQTDD 359
           TGH+    D
Sbjct: 435 TGHSTNLPD 443

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>HSH2D_HUMAN (Q96JZ2) Hematopoietic SH2 domain-containing protein (Hematopoietic|
           SH2 protein) (Adaptor in lymphocytes of unknown function
           X)
          Length = 352

 Score = 29.3 bits (64), Expect = 4.7
 Identities = 18/54 (33%), Positives = 23/54 (42%)
 Frame = +3

Query: 225 TVNAESSVGARSNNGVSEPLEAGDGNGDTEHDGSSATGHAEQTDDEPAADEASP 386
           TVN  S +  R +  +S P   G G G  +H G   +G    TD   A    SP
Sbjct: 227 TVNLSSLLDVRRSTVISGP---GTGKGSQDHSGDPTSGDRGYTDPCVATSLKSP 277

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>DSPP_RAT (Q62598) Dentin sialophosphoprotein precursor [Contains: Dentin|
           phosphoprotein (Dentin phosphophoryn) (DPP); Dentin
           sialoprotein (DSP)]
          Length = 687

 Score = 29.3 bits (64), Expect = 4.7
 Identities = 20/89 (22%), Positives = 37/89 (41%), Gaps = 1/89 (1%)
 Frame = +3

Query: 180 ETPDDKGDHITELSGT-VNAESSVGARSNNGVSEPLEAGDGNGDTEHDGSSATGHAEQTD 356
           E  +++G  +T   G     +++ G+ S NG+ E  + G G+G     G     H     
Sbjct: 214 EGSENQGAEVTPSIGEGAGLDNTEGSPSGNGIEEDEDTGSGDGVGADAGDGRESHDGTEG 273

Query: 357 DEPAADEASPVNVEKGDVAQHGVESRAYE 443
            E  +   +  N  +G V+    +S+  E
Sbjct: 274 HEGQSSGGNNDNRGQGSVSTEDDDSKEQE 302

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>PTMS_HUMAN (P20962) Parathymosin|
          Length = 101

 Score = 29.3 bits (64), Expect = 4.7
 Identities = 18/82 (21%), Positives = 33/82 (40%)
 Frame = +3

Query: 192 DKGDHITELSGTVNAESSVGARSNNGVSEPLEAGDGNGDTEHDGSSATGHAEQTDDEPAA 371
           +K + + E +     +  V     NG  E  E    +G+ E +G       E+ DDE  A
Sbjct: 18  EKKEKVEEKASRKERKKEVVEEEENGAEEEEEETAEDGEEEDEGEEEDEEEEEEDDEGPA 77

Query: 372 DEASPVNVEKGDVAQHGVESRA 437
            + +    ++ D  +   E+ A
Sbjct: 78  LKRAAEEEDEADPKRQKTENGA 99

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>POLR_KYMVJ (P36304) RNA replicase polyprotein (EC 2.7.7.48)|
          Length = 1874

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 15/41 (36%), Positives = 18/41 (43%)
 Frame = -2

Query: 337 PVAEEPSCSVSPFPSPASNGSETPLLDRAPTELSALTVPES 215
           P    PS S    P P S+ S+ P     PT  S+ T P S
Sbjct: 671 PNNPNPSSSAGSNPPPKSSSSDNPPAPNKPTPTSSSTTPPS 711

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>HYR1_CANAL (P46591) Hyphally-regulated protein precursor|
          Length = 937

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 20/70 (28%), Positives = 29/70 (41%), Gaps = 3/70 (4%)
 Frame = +3

Query: 222 GTVNAESSVGARSNNGVSEPLEAGDGNGDTE-HDGSSATGHAEQ--TDDEPAADEASPVN 392
           G  N  S   + SNNG       G G+G TE  +G S +    Q  +  +P  +E S   
Sbjct: 627 GGSNNGSGSDSGSNNGSGSGSNNGSGSGSTEGSEGGSGSNEGSQSGSGSQPGPNEGSEGG 686

Query: 393 VEKGDVAQHG 422
               + + HG
Sbjct: 687 SGSNEGSNHG 696

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>NNP1_MOUSE (P56183) NNP-1 protein (Novel nuclear protein 1) (Nop52)|
          Length = 494

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 19/85 (22%), Positives = 36/85 (42%), Gaps = 4/85 (4%)
 Frame = +3

Query: 207 ITELSGTVNAESSVGARSNNGVSEPLEAGDGNGDTEHDGSSATGH----AEQTDDEPAAD 374
           I ++   ++ +S  G  S+    E  +  DG    + DG ++ G     A+  D + A D
Sbjct: 229 IEDIMNELDTQSGEGEASDGDDGEASDGDDGEASDDDDGEASDGGDGDVADSDDSDGADD 288

Query: 375 EASPVNVEKGDVAQHGVESRAYEQE 449
           +   V+   G     G  +++ E E
Sbjct: 289 DDGDVSDGDGGDNDEGDSNKSSEGE 313

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>MAP1B_HUMAN (P46821) Microtubule-associated protein 1B (MAP 1B) [Contains: MAP1|
            light chain LC1]
          Length = 2468

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 28/91 (30%), Positives = 39/91 (42%)
 Frame = +3

Query: 171  DNMETPDDKGDHITELSGTVNAESSVGARSNNGVSEPLEAGDGNGDTEHDGSSATGHAEQ 350
            D++E  +D+G    E S T + E            EP E G+     EH   SA+ H+  
Sbjct: 921  DDIEKFEDEGAGFEESSETGDYEEKAETEE---AEEPEEDGE-----EHVCVSASKHSPT 972

Query: 351  TDDEPAADEASPVNVEKGDVAQHGVESRAYE 443
             D+E A  EA     EK +    G + RA E
Sbjct: 973  EDEESAKAEADAYIREKRESVASG-DDRAEE 1002

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>PGCA_BOVIN (P13608) Aggrecan core protein precursor (Cartilage-specific|
            proteoglycan core protein) (CSPCP)
          Length = 2364

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 20/56 (35%), Positives = 26/56 (46%)
 Frame = -2

Query: 331  AEEPSCSVSPFPSPASNGSETPLLDRAPTELSALTVPESSVIWSPLSSGVSMLSLD 164
            +E+P  S  PFPS     SE P     P+ LSA     + +  S   SGV  +S D
Sbjct: 875  SEKPIPSEEPFPSEKPFPSEEPFPSEEPSTLSAPVPSRTELPSSGEVSGVPEISGD 930

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>NCKX1_HUMAN (O60721) Sodium/potassium/calcium exchanger 1|
            (Na(+)/K(+)/Ca(2+)-exchange protein 1) (Retinal rod
            Na-Ca+K exchanger)
          Length = 1099

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 22/87 (25%), Positives = 33/87 (37%)
 Frame = +3

Query: 189  DDKGDHITELSGTVNAESSVGARSNNGVSEPLEAGDGNGDTEHDGSSATGHAEQTDDEPA 368
            + KGD+  E  G ++AE               E     G+TE    SA  H E  +DE  
Sbjct: 801  EGKGDNEGEDEGEIHAEDG-------------EMKGNEGETESQELSAENHGEAKNDEKG 847

Query: 369  ADEASPVNVEKGDVAQHGVESRAYEQE 449
             ++      + GD  +   E    E+E
Sbjct: 848  VEDGG--GSDGGDSEEEEEEEEEQEEE 872

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>IL16_AOTTR (O62678) Interleukin-16 precursor (IL-16) (Lymphocyte|
           chemoattractant factor) (LCF)
          Length = 632

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 16/48 (33%), Positives = 23/48 (47%)
 Frame = -2

Query: 337 PVAEEPSCSVSPFPSPASNGSETPLLDRAPTELSALTVPESSVIWSPL 194
           PV + PS     FP   S   ET LLD   ++L +++   SS +   L
Sbjct: 255 PVLKMPSQRARSFPLTRSQSCETKLLDEKTSKLYSISSQVSSAVMKSL 302

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>IL16_SAISC (O62677) Interleukin-16 precursor (IL-16) (Lymphocyte|
           chemoattractant factor) (LCF)
          Length = 627

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 16/48 (33%), Positives = 23/48 (47%)
 Frame = -2

Query: 337 PVAEEPSCSVSPFPSPASNGSETPLLDRAPTELSALTVPESSVIWSPL 194
           PV + PS     FP   S   ET LLD   ++L +++   SS +   L
Sbjct: 250 PVLKMPSQRARSFPLTRSQSCETKLLDEKTSKLYSISSQVSSAVMKSL 297

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>IL16_PANTR (O62666) Interleukin-16 precursor (IL-16) (Lymphocyte|
           chemoattractant factor) (LCF)
          Length = 631

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 16/48 (33%), Positives = 23/48 (47%)
 Frame = -2

Query: 337 PVAEEPSCSVSPFPSPASNGSETPLLDRAPTELSALTVPESSVIWSPL 194
           PV + PS     FP   S   ET LLD   ++L +++   SS +   L
Sbjct: 254 PVLKMPSQRARSFPLTRSQSCETKLLDEKTSKLYSISSQVSSAVMKSL 301

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>IL16_HUMAN (Q14005) Interleukin-16 precursor (IL-16) (Lymphocyte|
           chemoattractant factor) (LCF)
          Length = 631

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 16/48 (33%), Positives = 23/48 (47%)
 Frame = -2

Query: 337 PVAEEPSCSVSPFPSPASNGSETPLLDRAPTELSALTVPESSVIWSPL 194
           PV + PS     FP   S   ET LLD   ++L +++   SS +   L
Sbjct: 254 PVLKMPSQRARSFPLTRSQSCETKLLDEKTSKLYSISSQVSSAVMKSL 301

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>DSPP_MOUSE (P97399) Dentin sialophosphoprotein precursor (Dentin matrix|
           protein 3) (DMP-3) [Contains: Dentin phosphoprotein
           (Dentin phosphophoryn) (DPP); Dentin sialoprotein (DSP)]
          Length = 934

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 26/104 (25%), Positives = 45/104 (43%), Gaps = 24/104 (23%)
 Frame = +3

Query: 189 DDKGDHITELSGT-VNAESSVGARSNNGVSEPLEAGDGNGD--------TEHDGSSATG- 338
           +++G  +T   G     + + G+ S NGV E  + G G+G+          HDG+   G 
Sbjct: 218 ENQGTEVTPSIGEDAGLDDTDGSPSGNGVEEDEDTGSGDGEGAEAGDGRESHDGTKGQGG 277

Query: 339 --------HAEQ----TDDEPAADEASPVNVEKGDVA--QHGVE 428
                   H  Q    T+D+ + ++    N   GD +  ++GVE
Sbjct: 278 QSHGGNTDHRGQSSVSTEDDDSKEQEGFPNGHNGDNSSEENGVE 321

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>PTMA_PONPY (Q5R790) Prothymosin alpha [Contains: Thymosin alpha]|
          Length = 109

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 5/55 (9%)
 Frame = +3

Query: 213 ELSGTVNAESSVGARSNNG--VSEPLEAGDG---NGDTEHDGSSATGHAEQTDDE 362
           E +G   A++ V      G    E  E GDG   +GD + +  SATG     DDE
Sbjct: 40  EENGEQEADNEVDEEEEEGGEEEEEEEEGDGEEEDGDEDEEAESATGKRAAEDDE 94

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>FTSK_RHIME (Q92L89) DNA translocase ftsK|
          Length = 881

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 17/66 (25%), Positives = 28/66 (42%)
 Frame = +3

Query: 237 ESSVGARSNNGVSEPLEAGDGNGDTEHDGSSATGHAEQTDDEPAADEASPVNVEKGDVAQ 416
           E  V      GV + L+A   + + E+DG    G +   D E   D+A  + +  G  + 
Sbjct: 773 EEVVAYLKTQGVPQYLDAITEDDEDENDGGGPAGTSNLADSEDPYDQAVAIVLRDGKAST 832

Query: 417 HGVESR 434
             V+ R
Sbjct: 833 SYVQRR 838

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>MIA40_ASHGO (Q757A5) Intermembrane space import and assembly protein 40,|
           mitochondrial precursor (Mitochondrial import inner
           membrane translocase TIM40)
          Length = 266

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 16/56 (28%), Positives = 26/56 (46%)
 Frame = +3

Query: 249 GARSNNGVSEPLEAGDGNGDTEHDGSSATGHAEQTDDEPAADEASPVNVEKGDVAQ 416
           GA +     EP EA    G+T+ + + A    +  + E AA+ A+      G+ AQ
Sbjct: 115 GAVNEEAAGEPEEAAAEVGETQAEQAPAVETEQAAEAEQAAEAAAEDKASAGEAAQ 170

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>KEX1_YEAST (P09620) Carboxypeptidase KEX1 precursor (EC 3.4.16.6)|
           (Carboxypeptidase D)
          Length = 729

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 26/99 (26%), Positives = 36/99 (36%), Gaps = 10/99 (10%)
 Frame = +3

Query: 183 TPDDKGDHITELSG-----TVNAESSVGARSNNGVSEPLEAGDGNGDTEHDGSSATGHAE 347
           T DD     T  SG      +  E            E  +  DG+ D ++D      H  
Sbjct: 505 TDDDSDQDATTESGDKPKENLEEEEQEAQNEEGKEKEGNKDKDGDDDNDNDDDDEDDHNS 564

Query: 348 QTDDEPAADEASPVNVEKGDVAQHGVE-----SRAYEQE 449
           + DD+   D+    N EK   +  G+E     S  YEQE
Sbjct: 565 EGDDDDDDDDDEDDNNEK--QSNQGLEDSRHKSSEYEQE 601

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>TAF11_HUMAN (Q15544) Transcription initiation factor TFIID subunit 11|
           (Transcription initiation factor TFIID 28 kDa subunit)
           (TAF(II)28) (TAFII-28) (TAFII28) (TFIID subunit
           p30-beta)
          Length = 211

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 17/68 (25%), Positives = 27/68 (39%)
 Frame = +3

Query: 171 DNMETPDDKGDHITELSGTVNAESSVGARSNNGVSEPLEAGDGNGDTEHDGSSATGHAEQ 350
           D  E+P DKG    E   T       GA   +G+ E     + +GD + D   A     +
Sbjct: 3   DAHESPSDKGGETGESDETAAVPGDPGATDTDGIPE-----ETDGDADVDLKEAAAEEGE 57

Query: 351 TDDEPAAD 374
            + +  +D
Sbjct: 58  LESQDVSD 65

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>RELA_STRAT (O85709) GTP pyrophosphokinase (EC 2.7.6.5) (ATP:GTP|
           3'-pyrophosphotransferase) (ppGpp synthetase I)
           ((P)ppGpp synthetase)
          Length = 841

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
 Frame = +3

Query: 192 DKGDHITELSGTVNAESSVGARSNNGVSEPL-EAGDGNGDTEHDGSS-ATGHAEQTDDEP 365
           D+  H+T        +S+ GA      +EP   A DG G  EHD S+ A   AE+T  +P
Sbjct: 3   DEAQHLT----AAKPDSAAGA-----AAEPAAHAQDGGGPVEHDRSAPADKPAERTRPKP 53

Query: 366 AADE 377
           A  E
Sbjct: 54  APPE 57

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>PDZK1_RAT (Q9JJ40) PDZ domain-containing protein 1 (Na/Pi cotransporter|
           C-terminal-associated protein) (NaPi-Cap1) (Na(+)/H(+)
           exchanger regulatory factor 3) (Sodium-hydrogen
           exchanger regulatory factor 3) (Dietary Pi-regulated
           RNA-1) (Diphor-1) (C-termi
          Length = 523

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 4/70 (5%)
 Frame = +3

Query: 177 METPDDKGDHITELSGTVNAESSVGARSN---NGVSEPLEAG-DGNGDTEHDGSSATGHA 344
           +E     G+H+T L     A S   A+     + +++PL AG D  G+TEHD + +T   
Sbjct: 440 VERIKSSGEHVTLLVCGKVAYSYFQAKKIPILSSLADPLVAGPDAKGETEHDSAEST--- 496

Query: 345 EQTDDEPAAD 374
            +    PA D
Sbjct: 497 -KDSSHPARD 505

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>G16U_BACSU (P80875) General stress protein 16U (GSP16U)|
          Length = 192

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
 Frame = +3

Query: 297 GNGDTEHDGSSATGHAEQTDDEPAAD-EASPVNVEKGD--VAQHGVESRA 437
           GNG   H G + TG  E  D+    +  A P N++K    +  H  E+R+
Sbjct: 69  GNGSVVHSGDNLTGAGEGDDENVKVNLSAVPANIDKISFVITIHDAEARS 118


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 62,254,490
Number of Sequences: 219361
Number of extensions: 1315845
Number of successful extensions: 5671
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 4920
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5594
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2735358828
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result