Clone Name | bart44g04 |
---|---|
Clone Library Name | barley_pub |
>CHIT2_TULBA (Q7M443) Chitinase 2 (EC 3.2.1.14) (Tulip bulb chitinase-2) (TBC-2)| Length = 275 Score = 101 bits (251), Expect(2) = 2e-38 Identities = 52/85 (61%), Positives = 62/85 (72%) Frame = +3 Query: 330 GATVNGRPVFFNATSGVDSWVRYAVDSLTGIIQRYGLDGIDIDYEQFQADPATFAECAGR 509 G +V G VFFN +S V SWV AV SLT II++Y LDGIDIDYE F+ DP TFAEC G+ Sbjct: 82 GNSVGGERVFFNPSS-VSSWVDNAVSSLTKIIKQYHLDGIDIDYEHFKGDPNTFAECIGQ 140 Query: 510 LVAALKSSGVIRFASIAPYGNADVQ 584 LV LK +GV+ F SIAP+ +A VQ Sbjct: 141 LVTRLKKNGVVSFVSIAPFDDAQVQ 165 Score = 77.4 bits (189), Expect(2) = 2e-38 Identities = 35/53 (66%), Positives = 41/53 (77%) Frame = +2 Query: 173 FRDYIGALYNGVRFADVPINPRARFDFILAFVIDYTTATEPPTPTNGRFNVFW 331 FR+YIGA +N V+F+DVPINP F FILAF IDYT+ + PTPTNG FN FW Sbjct: 3 FREYIGAQFNDVKFSDVPINPNVDFHFILAFAIDYTSGSS-PTPTNGNFNPFW 54
>CHIT1_TULBA (Q9SLP4) Chitinase 1 precursor (EC 3.2.1.14) (Tulip bulb| chitinase-1) (TBC-1) Length = 314 Score = 97.8 bits (242), Expect(2) = 5e-36 Identities = 50/85 (58%), Positives = 62/85 (72%) Frame = +3 Query: 330 GATVNGRPVFFNATSGVDSWVRYAVDSLTGIIQRYGLDGIDIDYEQFQADPATFAECAGR 509 G +V G+ VFF+ +S V SWV AV SLT II++Y LDGIDIDYE F+ DP TFAEC G+ Sbjct: 108 GDSVGGKNVFFSPSS-VSSWVENAVSSLTRIIKQYHLDGIDIDYEHFKGDPNTFAECIGQ 166 Query: 510 LVAALKSSGVIRFASIAPYGNADVQ 584 LV LK + V+ F SIAP+ +A VQ Sbjct: 167 LVTRLKKNEVVSFVSIAPFDDAQVQ 191 Score = 73.2 bits (178), Expect(2) = 5e-36 Identities = 33/53 (62%), Positives = 40/53 (75%) Frame = +2 Query: 173 FRDYIGALYNGVRFADVPINPRARFDFILAFVIDYTTATEPPTPTNGRFNVFW 331 FR+YIG+ +N V+F+DVPINP F FILAF IDYT+ + PTPTNG F FW Sbjct: 29 FREYIGSQFNDVKFSDVPINPDVDFHFILAFAIDYTSGSS-PTPTNGNFKPFW 80
>RUAP_SOYBN (P39657) RuBisCO-associated protein| Length = 283 Score = 55.1 bits (131), Expect = 1e-07 Identities = 30/75 (40%), Positives = 39/75 (52%) Frame = +3 Query: 351 PVFFNATSGVDSWVRYAVDSLTGIIQRYGLDGIDIDYEQFQADPATFAECAGRLVAALKS 530 P + S ++WV A SL II+ Y LDGID+ YE A+ A F G LV LK Sbjct: 91 PFTIGSDSNSEAWVSEATASLKSIIKTYNLDGIDVSYEDIAANEADFVNSVGGLVRNLKQ 150 Query: 531 SGVIRFASIAPYGNA 575 + +I AS A +A Sbjct: 151 NKLITVASFATSADA 165
>CHIX_STROI (Q05638) Exochitinase 1 precursor (EC 3.2.1.14)| Length = 597 Score = 32.0 bits (71), Expect = 1.4 Identities = 13/21 (61%), Positives = 17/21 (80%) Frame = +3 Query: 402 VDSLTGIIQRYGLDGIDIDYE 464 V S++ II YGLDG+DID+E Sbjct: 364 VSSVSKIIDEYGLDGLDIDFE 384
>SRC_AVIS2 (P15054) Tyrosine-protein kinase transforming protein Src (EC| 2.7.10.2) (p60-Src) (v-Src) (pp60v-src) Length = 586 Score = 31.6 bits (70), Expect = 1.8 Identities = 12/23 (52%), Positives = 17/23 (73%) Frame = +2 Query: 236 RARFDFILAFVIDYTTATEPPTP 304 R F+++ AF+ DY T+TEPP P Sbjct: 505 RPTFEYLQAFLEDYFTSTEPPVP 527
>Y2415_ARCFU (O30256) UPF0219 protein AF2415| Length = 343 Score = 30.0 bits (66), Expect = 5.2 Identities = 12/48 (25%), Positives = 26/48 (54%) Frame = +3 Query: 372 SGVDSWVRYAVDSLTGIIQRYGLDGIDIDYEQFQADPATFAECAGRLV 515 +G+ ++ R+ + + G++++YG D DY F A F A +++ Sbjct: 200 TGLPAYFRHVISAAKGLMEKYGYKVEDFDYAVFHMPNAKFPVRAAKML 247
>EBAG_FLASP (P80036) Endo-beta-N-acetylglucosaminidase (EC 3.2.1.96)| (Mannosyl-glycoprotein endo-beta-N-acetyl-glucosaminidase) (DI-N-acetylchitobiosyl beta-N-acetylglucosaminidase) Length = 267 Score = 29.6 bits (65), Expect = 6.7 Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 7/62 (11%) Frame = +3 Query: 411 LTGIIQRYGLDGIDIDYEQ----FQADPATFAECAGRLVAALKS---SGVIRFASIAPYG 569 ++ + +YGLDG+D+D E P + G L++AL++ +I F I P Sbjct: 111 VSATVSKYGLDGVDLDDEYSDYGTNGTPQPNQQSIGGLISALRADVPGKLISFYDIGPAS 170 Query: 570 NA 575 +A Sbjct: 171 SA 172
>Y1471_METMP (Q6LX81) Hypothetical UPF0348 protein MMP1471| Length = 349 Score = 29.6 bits (65), Expect = 6.7 Identities = 13/30 (43%), Positives = 20/30 (66%) Frame = -1 Query: 232 VDRHVREPDAVVKGADVVAEGVRVGVSCRG 143 V+RH+R A++ GAD+V EG +G+ G Sbjct: 91 VNRHIRAEMALLAGADLVVEGPPMGIMGSG 120 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.314 0.133 0.420 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 59,580,602 Number of Sequences: 219361 Number of extensions: 973277 Number of successful extensions: 2820 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 2766 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2818 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 5101629520 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.9 bits)