ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart44f07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_188014.1| Oryza sativa (japonica cultivar-group), Ozsa843... 178 1e-41
2dbj|AK101084.1| Oryza sativa (japonica cultivar-group) cDNA clon... 178 1e-41
3dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 161 3e-36
4dbj|AP001080.1| Oryza sativa (japonica cultivar-group) genomic D... 161 3e-36
5dbj|AP000969.1| Oryza sativa (japonica cultivar-group) genomic D... 161 3e-36
6gb|AC118289.2| Oryza sativa (japonica cultivar-group) chromosome... 56 1e-04
7dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 56 1e-04
8gb|AC147802.2| Oryza sativa chromosome 3 BAC OSJNBb0013C14 genom... 46 0.12
9gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 46 0.12
10dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.12
11gb|AC023830.9| Homo sapiens chromosome 16 clone RP11-709D24, com... 46 0.12
12ref|XM_584904.2| PREDICTED: Bos taurus similar to Protein-argini... 44 0.45
13gb|DQ481420.1| Uncultured microorganism clone 12001A18_D8 dinitr... 42 1.8
14emb|AL392106.4| Human DNA sequence from clone RP11-563H8 on chro... 42 1.8
15emb|X91637.1|GGBRG1PRT G.gallus mRNA for BRG1 protein 42 1.8
16gb|AC104741.2| Homo sapiens chromosome 3 clone RP11-228H5, compl... 42 1.8
17ref|NM_205059.1| Gallus gallus BRG1 protein (BRG1), mRNA 42 1.8
18gb|DQ177023.1| Uncultured bacterium clone 2H3 dinitrogenase redu... 42 1.8
19ref|XM_306670.2| Anopheles gambiae str. PEST ENSANGP00000013785 ... 42 1.8
20ref|XM_507291.1| PREDICTED Oryza sativa (japonica cultivar-group... 40 7.1
21ref|XM_483295.1| Oryza sativa (japonica cultivar-group), mRNA 40 7.1
22gb|AC134439.4| Mus musculus BAC clone RP24-494I18 from chromosom... 40 7.1
23gb|AF440781.1| Streptomyces cinnamonensis polyether antibiotic m... 40 7.1
24emb|AL939131.1|SCO939131 Streptomyces coelicolor A3(2) complete ... 40 7.1
25dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.1
26dbj|AP006049.2| Oryza sativa (japonica cultivar-group) genomic D... 40 7.1
27dbj|AK106031.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.1
28dbj|AK072063.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.1
29gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome 40 7.1
30gb|AC147108.3| Mus musculus BAC clone RP24-70D19 from 13, comple... 40 7.1 
>ref|NM_188014.1| Oryza sativa (japonica cultivar-group), Ozsa8434 predicted mRNA
          Length = 930

 Score =  178 bits (90), Expect = 1e-41
 Identities = 144/162 (88%)
 Strand = Plus / Plus

                                                                       
Query: 143 gccatccgatacgccgtggtggatgccttcgcggctgagccgttcaagggcaaccccgcc 202
           |||||||  |||||||||||||| || |||||||| ||||||||||||||||||||||||
Sbjct: 13  gccatccagtacgccgtggtggacgcgttcgcggccgagccgttcaagggcaaccccgcc 72

                                                                       
Query: 203 gcggtatgcctcctcgaagaggagggcgcctccgcggccgtggacgaccggtggatgcag 262
           || ||||||||||| |||| |||||  ||| | ||||| | |||||| ||||||||||||
Sbjct: 73  gccgtatgcctcctggaaggggaggatgccgcggcggcggcggacgagcggtggatgcag 132

                                                     
Query: 263 tccgtcgccgccgagttcaacctctcggacaccgccttcctc 304
           |||||||| ||||||||||||||||| || ||||||||||||
Sbjct: 133 tccgtcgcagccgagttcaacctctccgagaccgccttcctc 174



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 88/101 (87%)
 Strand = Plus / Plus

                                                                       
Query: 326 gccggcgcagccccgcggttccacctccgatggttcactcccgtcaccgaggttgacctc 385
           |||| ||| ||||||||||||| |||||| |||||||| |||||| |||||||  | |||
Sbjct: 205 gccgacgccgccccgcggttccgcctccgctggttcacccccgtcgccgaggtgaatctc 264

                                                    
Query: 386 tgcggccacgcgacgttggcctctgcgcacttcctcttcac 426
           ||||||||||||||| |||| || || ||||||||||||||
Sbjct: 265 tgcggccacgcgacgctggcatccgcccacttcctcttcac 305
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>dbj|AK101084.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033024I08, full
           insert sequence
          Length = 1161

 Score =  178 bits (90), Expect = 1e-41
 Identities = 144/162 (88%)
 Strand = Plus / Plus

                                                                       
Query: 143 gccatccgatacgccgtggtggatgccttcgcggctgagccgttcaagggcaaccccgcc 202
           |||||||  |||||||||||||| || |||||||| ||||||||||||||||||||||||
Sbjct: 95  gccatccagtacgccgtggtggacgcgttcgcggccgagccgttcaagggcaaccccgcc 154

                                                                       
Query: 203 gcggtatgcctcctcgaagaggagggcgcctccgcggccgtggacgaccggtggatgcag 262
           || ||||||||||| |||| |||||  ||| | ||||| | |||||| ||||||||||||
Sbjct: 155 gccgtatgcctcctggaaggggaggatgccgcggcggcggcggacgagcggtggatgcag 214

                                                     
Query: 263 tccgtcgccgccgagttcaacctctcggacaccgccttcctc 304
           |||||||| ||||||||||||||||| || ||||||||||||
Sbjct: 215 tccgtcgcagccgagttcaacctctccgagaccgccttcctc 256



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 88/101 (87%)
 Strand = Plus / Plus

                                                                       
Query: 326 gccggcgcagccccgcggttccacctccgatggttcactcccgtcaccgaggttgacctc 385
           |||| ||| ||||||||||||| |||||| |||||||| |||||| |||||||  | |||
Sbjct: 287 gccgacgccgccccgcggttccgcctccgctggttcacccccgtcgccgaggtgaatctc 346

                                                    
Query: 386 tgcggccacgcgacgttggcctctgcgcacttcctcttcac 426
           ||||||||||||||| |||| || || ||||||||||||||
Sbjct: 347 tgcggccacgcgacgctggcatccgcccacttcctcttcac 387
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score =  161 bits (81), Expect = 3e-36
 Identities = 129/145 (88%)
 Strand = Plus / Minus

                                                                           
Query: 160     ggtggatgccttcgcggctgagccgttcaagggcaaccccgccgcggtatgcctcctcga 219
               |||||| || |||||||| |||||||||||||||||||||||||| ||||||||||| ||
Sbjct: 9116217 ggtggacgcgttcgcggccgagccgttcaagggcaaccccgccgccgtatgcctcctgga 9116158

                                                                           
Query: 220     agaggagggcgcctccgcggccgtggacgaccggtggatgcagtccgtcgccgccgagtt 279
               || |||||  ||| | ||||| | |||||| |||||||||||||||||||| ||||||||
Sbjct: 9116157 aggggaggatgccgcggcggcggcggacgagcggtggatgcagtccgtcgcagccgagtt 9116098

                                        
Query: 280     caacctctcggacaccgccttcctc 304
               ||||||||| || ||||||||||||
Sbjct: 9116097 caacctctccgagaccgccttcctc 9116073



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 47/53 (88%)
 Strand = Plus / Minus

                                                                    
Query: 326     gccggcgcagccccgcggttccacctccgatggttcactcccgtcaccgaggt 378
               |||| ||| ||||||||||||| |||||| |||||||| |||||| |||||||
Sbjct: 9116042 gccgacgccgccccgcggttccgcctccgctggttcacccccgtcgccgaggt 9115990



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                           
Query: 383     ctctgcggccacgcgacgttggcctctgcgcacttcctcttcac 426
               |||||||||||||||||| |||| || || ||||||||||||||
Sbjct: 9115898 ctctgcggccacgcgacgctggcatccgcccacttcctcttcac 9115855
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>dbj|AP001080.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
              clone:P0499C11
          Length = 151369

 Score =  161 bits (81), Expect = 3e-36
 Identities = 129/145 (88%)
 Strand = Plus / Minus

                                                                          
Query: 160    ggtggatgccttcgcggctgagccgttcaagggcaaccccgccgcggtatgcctcctcga 219
              |||||| || |||||||| |||||||||||||||||||||||||| ||||||||||| ||
Sbjct: 145224 ggtggacgcgttcgcggccgagccgttcaagggcaaccccgccgccgtatgcctcctgga 145165

                                                                          
Query: 220    agaggagggcgcctccgcggccgtggacgaccggtggatgcagtccgtcgccgccgagtt 279
              || |||||  ||| | ||||| | |||||| |||||||||||||||||||| ||||||||
Sbjct: 145164 aggggaggatgccgcggcggcggcggacgagcggtggatgcagtccgtcgcagccgagtt 145105

                                       
Query: 280    caacctctcggacaccgccttcctc 304
              ||||||||| || ||||||||||||
Sbjct: 145104 caacctctccgagaccgccttcctc 145080



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 47/53 (88%)
 Strand = Plus / Minus

                                                                   
Query: 326    gccggcgcagccccgcggttccacctccgatggttcactcccgtcaccgaggt 378
              |||| ||| ||||||||||||| |||||| |||||||| |||||| |||||||
Sbjct: 145049 gccgacgccgccccgcggttccgcctccgctggttcacccccgtcgccgaggt 144997



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                          
Query: 383    ctctgcggccacgcgacgttggcctctgcgcacttcctcttcac 426
              |||||||||||||||||| |||| || || ||||||||||||||
Sbjct: 144905 ctctgcggccacgcgacgctggcatccgcccacttcctcttcac 144862
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>dbj|AP000969.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
             clone:P0011D01
          Length = 168655

 Score =  161 bits (81), Expect = 3e-36
 Identities = 129/145 (88%)
 Strand = Plus / Minus

                                                                         
Query: 160   ggtggatgccttcgcggctgagccgttcaagggcaaccccgccgcggtatgcctcctcga 219
             |||||| || |||||||| |||||||||||||||||||||||||| ||||||||||| ||
Sbjct: 16599 ggtggacgcgttcgcggccgagccgttcaagggcaaccccgccgccgtatgcctcctgga 16540

                                                                         
Query: 220   agaggagggcgcctccgcggccgtggacgaccggtggatgcagtccgtcgccgccgagtt 279
             || |||||  ||| | ||||| | |||||| |||||||||||||||||||| ||||||||
Sbjct: 16539 aggggaggatgccgcggcggcggcggacgagcggtggatgcagtccgtcgcagccgagtt 16480

                                      
Query: 280   caacctctcggacaccgccttcctc 304
             ||||||||| || ||||||||||||
Sbjct: 16479 caacctctccgagaccgccttcctc 16455



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 47/53 (88%)
 Strand = Plus / Minus

                                                                  
Query: 326   gccggcgcagccccgcggttccacctccgatggttcactcccgtcaccgaggt 378
             |||| ||| ||||||||||||| |||||| |||||||| |||||| |||||||
Sbjct: 16424 gccgacgccgccccgcggttccgcctccgctggttcacccccgtcgccgaggt 16372



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                         
Query: 383   ctctgcggccacgcgacgttggcctctgcgcacttcctcttcac 426
             |||||||||||||||||| |||| || || ||||||||||||||
Sbjct: 16280 ctctgcggccacgcgacgctggcatccgcccacttcctcttcac 16237
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>gb|AC118289.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0099O15, complete sequence
          Length = 137357

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Plus

                                                         
Query: 383   ctctgcggccacgcgacgttggcctctgcgcacttcctcttcac 426
             |||||||||||||||||| |||| || || ||||||||||||||
Sbjct: 43904 ctctgcggccacgcgacgctggcatccgcccacttcctcttcac 43947
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Plus

                                                            
Query: 383      ctctgcggccacgcgacgttggcctctgcgcacttcctcttcac 426
                |||||||||||||||||| |||| || || ||||||||||||||
Sbjct: 23653899 ctctgcggccacgcgacgctggcatccgcccacttcctcttcac 23653942
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>gb|AC147802.2| Oryza sativa chromosome 3 BAC OSJNBb0013C14 genomic sequence, complete
             sequence
          Length = 132981

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                            
Query: 253   gtggatgcagtccgtcgccgccgagttcaac 283
             ||||||||||||||| ||||| |||||||||
Sbjct: 37875 gtggatgcagtccgttgccgcggagttcaac 37905
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                               
Query: 253      gtggatgcagtccgtcgccgccgagttcaac 283
                ||||||||||||||| ||||| |||||||||
Sbjct: 18133270 gtggatgcagtccgttgccgcggagttcaac 18133300
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                               
Query: 253      gtggatgcagtccgtcgccgccgagttcaac 283
                ||||||||||||||| ||||| |||||||||
Sbjct: 18126811 gtggatgcagtccgttgccgcggagttcaac 18126841
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>gb|AC023830.9| Homo sapiens chromosome 16 clone RP11-709D24, complete sequence
          Length = 182662

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 227   ggcgcctccgcggccgtggacga 249
             |||||||||||||||||||||||
Sbjct: 94544 ggcgcctccgcggccgtggacga 94566
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>ref|XM_584904.2| PREDICTED: Bos taurus similar to Protein-arginine deiminase type IV
            (Peptidylarginine deiminase IV) (HL-60 PAD) (LOC508161),
            mRNA
          Length = 2233

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 241  cgtggacgaccggtggatgcag 262
            ||||||||||||||||||||||
Sbjct: 1028 cgtggacgaccggtggatgcag 1049
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>gb|DQ481420.1| Uncultured microorganism clone 12001A18_D8 dinitrogenase reductase
           (nifH) gene, partial cds
          Length = 328

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 213 tcctcgaagaggagggcgcct 233
           |||||||||||||||||||||
Sbjct: 195 tcctcgaagaggagggcgcct 215
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>emb|AL392106.4| Human DNA sequence from clone RP11-563H8 on chromosome 9 Contains a
             novel gene (FLJ20808) and a ribosomal protein L23a
             (RPL23A) pseudogene, complete sequence
          Length = 150771

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 360   tcactcccgtcaccgaggttg 380
             |||||||||||||||||||||
Sbjct: 29841 tcactcccgtcaccgaggttg 29861
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>emb|X91637.1|GGBRG1PRT G.gallus mRNA for BRG1 protein
          Length = 4893

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 318  ccggggcagccggcgcagccc 338
            |||||||||||||||||||||
Sbjct: 991  ccggggcagccggcgcagccc 1011
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>gb|AC104741.2| Homo sapiens chromosome 3 clone RP11-228H5, complete sequence
          Length = 168433

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 129   aaatgggcaaaagggccatcc 149
             |||||||||||||||||||||
Sbjct: 94651 aaatgggcaaaagggccatcc 94631
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>ref|NM_205059.1| Gallus gallus BRG1 protein (BRG1), mRNA
          Length = 4893

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 318  ccggggcagccggcgcagccc 338
            |||||||||||||||||||||
Sbjct: 991  ccggggcagccggcgcagccc 1011
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>gb|DQ177023.1| Uncultured bacterium clone 2H3 dinitrogenase reductase (nifH) gene,
           partial sequence
          Length = 533

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 213 tcctcgaagaggagggcgcct 233
           |||||||||||||||||||||
Sbjct: 304 tcctcgaagaggagggcgcct 324
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>ref|XM_306670.2| Anopheles gambiae str. PEST ENSANGP00000013785
           (ENSANGG00000011296), partial mRNA
          Length = 777

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 272 gccgagttcaacctctcggacaccgcctt 300
           |||||||||||||| ||||| ||||||||
Sbjct: 103 gccgagttcaacctgtcggagaccgcctt 131
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>ref|XM_507291.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBa0016N23.125
           mRNA
          Length = 1424

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 267 tcgccgccgagttcaacctc 286
           ||||||||||||||||||||
Sbjct: 411 tcgccgccgagttcaacctc 430
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>ref|XM_483295.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1411

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 267 tcgccgccgagttcaacctc 286
           ||||||||||||||||||||
Sbjct: 397 tcgccgccgagttcaacctc 416
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>gb|AC134439.4| Mus musculus BAC clone RP24-494I18 from chromosome 13, complete sequence
          Length = 133093

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 345    tccacctccgatggttcact 364
              ||||||||||||||||||||
Sbjct: 131289 tccacctccgatggttcact 131270
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>gb|AF440781.1| Streptomyces cinnamonensis polyether antibiotic monensin biosynthesis
             gene cluster, partial sequence
          Length = 103450

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 235   cgcggccgtggacgaccggtggat 258
             ||||||||||||||||| ||||||
Sbjct: 75423 cgcggccgtggacgacccgtggat 75400
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>emb|AL939131.1|SCO939131 Streptomyces coelicolor A3(2) complete genome; segment 28/29
          Length = 303550

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 229    cgcctccgcggccgtggacg 248
              ||||||||||||||||||||
Sbjct: 126276 cgcctccgcggccgtggacg 126295
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 267      tcgccgccgagttcaacctc 286
                ||||||||||||||||||||
Sbjct: 25326782 tcgccgccgagttcaacctc 25326763
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>dbj|AP006049.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OSJNBa0016N23
          Length = 147336

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 267    tcgccgccgagttcaacctc 286
              ||||||||||||||||||||
Sbjct: 101967 tcgccgccgagttcaacctc 101948
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>dbj|AK106031.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-206-D03, full
           insert sequence
          Length = 1411

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 267 tcgccgccgagttcaacctc 286
           ||||||||||||||||||||
Sbjct: 397 tcgccgccgagttcaacctc 416
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>dbj|AK072063.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013110D22, full
           insert sequence
          Length = 1424

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 267 tcgccgccgagttcaacctc 286
           ||||||||||||||||||||
Sbjct: 411 tcgccgccgagttcaacctc 430
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>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome
          Length = 3551823

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 188    aagggcaaccccgccgcggtatgc 211
              ||||||||||||||||||| ||||
Sbjct: 157225 aagggcaaccccgccgcggaatgc 157202
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>gb|AC147108.3| Mus musculus BAC clone RP24-70D19 from 13, complete sequence
          Length = 188893

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 345   tccacctccgatggttcact 364
             ||||||||||||||||||||
Sbjct: 62487 tccacctccgatggttcact 62468


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,439,771
Number of Sequences: 3902068
Number of extensions: 2439771
Number of successful extensions: 51276
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 50971
Number of HSP's gapped (non-prelim): 305
length of query: 525
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 502
effective length of database: 17,143,297,704
effective search space: 8605935447408
effective search space used: 8605935447408
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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