>SSM1_YEAST (P53078) Protein SSM1|
          Length = 280

 Score = 41.6 bits (96), Expect = 0.001
 Identities = 39/142 (27%), Positives = 60/142 (42%), Gaps = 6/142 (4%)
 Frame = +3

Query: 102 SPVTSPFDCLLIDLDDTLYPGNTGIGPALRRNIDEFLVXXXXXXXXXXXXXXXXXXXSHG 281
           +P          D+D+ LY  +T I   ++++I  F                      +G
Sbjct: 49  TPQNPNLKVFFFDIDNCLYKSSTRIHDLMQQSILRFFQTHLKLSPEDAHVLNNSYYKEYG 108

Query: 282 STLAGLIALGHDVHPDEYHSYVHGRLPY-DVIAADPQLAAALQSMPQR-KI----LFTNS 443
             + GL+   H V+  EY+  V   LP  D++  D  L   L  + Q  KI    LFTN+
Sbjct: 109 LAIRGLVMF-HKVNALEYNRLVDDSLPLQDILKPDIPLRNMLLRLRQSGKIDKLWLFTNA 167

Query: 444 DRAHMRRSLERLGLDEALFDGV 509
            + H  R L  LG+ + LFDG+
Sbjct: 168 YKNHAIRCLRLLGIAD-LFDGL 188

>YEM7_YEAST (P40025) Hypothetical 37.7 kDa protein in PIP1-GLN3 intergenic|
           region
          Length = 321

 Score = 40.8 bits (94), Expect = 0.003
 Identities = 32/132 (24%), Positives = 62/132 (46%), Gaps = 8/132 (6%)
 Frame = +3

Query: 138 DLDDTLYPGNTGIGPALRRNIDEFLVXXXXXXXXXXXXXXXXXXXSHGSTLAGLIALGHD 317
           D+D+TLY  +T +   +++++  F                      +G ++ GLI     
Sbjct: 58  DIDNTLYRKSTKVQLLMQQSLSNFFKYELGFDDDEAERLIESYYQEYGLSVKGLIKNKQI 117

Query: 318 VHPDEYHSYVHGRLPY-DVIAADPQLAAALQSMPQRKI-------LFTNSDRAHMRRSLE 473
               +Y++++   LP  D +  D +L   L ++ ++K+       LFTNS + H  R ++
Sbjct: 118 DDVLQYNTFIDDSLPLQDYLKPDWKLRELLINLKKKKLGKFDKLWLFTNSYKNHAIRCVK 177

Query: 474 RLGLDEALFDGV 509
            LG+ + LFDG+
Sbjct: 178 ILGIAD-LFDGI 188

>YAI5_SCHPO (Q09893) Hypothetical protein C24B11.05 in chromosome I|
          Length = 226

 Score = 39.3 bits (90), Expect = 0.007
 Identities = 34/130 (26%), Positives = 55/130 (42%), Gaps = 3/130 (2%)
 Frame = +3

Query: 129 LLIDLDDTLYPGNTGIGPALRRNIDEFLVXXXXXXXXXXXXXXXXXXXSHGSTLAGLIAL 308
           +  DLD+ LYP +  I   +   I  F                      +G  + GL+ L
Sbjct: 8   IFFDLDNCLYPKSYKIHNMMAARITAFFSDKLGIPTEEAERLREVYYRHYGIAIRGLV-L 66

Query: 309 GHDVHPDEYHSYVHGRLPYD-VIAADPQLAAALQSMPQRKI--LFTNSDRAHMRRSLERL 479
            H++   +Y   V   LP + VI  D  L   L  + ++    +FTN+   H  R L+ L
Sbjct: 67  HHEIDAVDYDQRVDQSLPLEKVIKKDEVLREMLLELRKKYKCWIFTNAYIVHANRVLKYL 126

Query: 480 GLDEALFDGV 509
           G+++  FDG+
Sbjct: 127 GIEDC-FDGI 135

>UVRB_HALSA (Q9HMT9) UvrABC system protein B (Protein uvrB) (Excinuclease ABC|
           subunit B)
          Length = 689

 Score = 29.6 bits (65), Expect = 5.9
 Identities = 20/52 (38%), Positives = 29/52 (55%)
 Frame = -2

Query: 548 LAEEIRVHGLEAYDAVEEGLVEAQPLQRPPHVRAVRVGEQDLALGHALERGG 393
           +AE++  +  EA  AVE    E   L+R   VR +R+GE D+ +G  L R G
Sbjct: 470 MAEDLTEYLEEAGVAVEYMHDETDTLERHELVRGLRLGEYDVLVGINLLREG 521

>SYT_IDILO (Q5QYN4) Threonyl-tRNA synthetase (EC 6.1.1.3) (Threonine--tRNA|
           ligase) (ThrRS)
          Length = 638

 Score = 28.9 bits (63), Expect = 10.0
 Identities = 17/52 (32%), Positives = 25/52 (48%)
 Frame = -3

Query: 214 TRNSSMLRLSAGPMPVLPGYSVSSRSMRRQSKGEVTGDWNAMAGELAARSRG 59
           T N   +R SA       G+ +   +++R     V GD    AGE+A R+RG
Sbjct: 561 TLNEKGIRASADLRNEKIGFKIREHTLKRVPYLLVVGDKEVEAGEVAVRTRG 612


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 50,572,784
Number of Sequences: 219361
Number of extensions: 740894
Number of successful extensions: 3391
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3354
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3390
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4430660157
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)