ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart44e12 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK072559.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023132A10, full insert sequence Length = 1274 Score = 482 bits (243), Expect = e-133 Identities = 392/442 (88%), Gaps = 6/442 (1%) Strand = Plus / Plus Query: 96 atggcaacgctcaaggtcccctccaacgtccccgccctcgccgacgactgcgacaacctc 155 ||||| ||||||| ||||||||| |||||| || ||||||||||||||||| | ||| Sbjct: 96 atggcgacgctcaccgtcccctccgccgtcccgcccgtcgccgacgactgcgaccagctc 155 Query: 156 cgcaaggccttccaagggtggggcacgaacgaggcgctcatcatctccatcctgggccac 215 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 156 cgcaaggccttccaagggtggggcacgaacgaggcgctcatcatctccatcctggcccac 215 Query: 216 cgcgacgccgcgcagcgccgcgccatccgcaagcactacgccgacacctacggcgaggag 275 |||||||| |||||||| |||||||||||| ||||||||||||||||||||||||| Sbjct: 216 cgcgacgcggcgcagcggcgcgccatccgccgcgcctacgccgacacctacggcgaggag 275 Query: 276 ctgctccggagcatcaccgacgggatctcaggcgacttcgagagggccgtgatcctgtgg 335 || ||||| ||||||||||||| |||||| |||||||||||||||||||||||||||||| Sbjct: 276 ctcctccgcagcatcaccgacgagatctccggcgacttcgagagggccgtgatcctgtgg 335 Query: 336 acgctggaccccgcggagcgggacgcggtgctcgccaacgagaccgccaagaagtggcac 395 ||||||||||| |||||||| ||||||||||||||||||||| ||| | ||||||| || Sbjct: 336 acgctggacccggcggagcgcgacgcggtgctcgccaacgaggtcgcgaggaagtggtac 395 Query: 396 cc------ggggaaccccgtgctcgtcgagatcgcctgctcgcgcggctccgcgcagctc 449 || |||| || |||||| ||||||||||| ||| |||||||| |||||||||| Sbjct: 396 ccagggagcgggagccgcgtgctggtcgagatcgcgtgcgcgcgcggccccgcgcagctg 455 Query: 450 ttcgccgtcaggcaggcctaccatgaccgcttcaagcgctcgctcgaggaggacgtcgct 509 ||||| ||||||||||||||||| || |||||||||||||||||||||||||||||||| Sbjct: 456 ttcgcggtcaggcaggcctaccacgagcgcttcaagcgctcgctcgaggaggacgtcgcg 515 Query: 510 gcgcacgtcaccggcgacttcc 531 ||||||| ||| || ||||||| Sbjct: 516 gcgcacgccactggtgacttcc 537
>emb|X98244.2|ZMANNP33 Z.mays mRNA for annexin p33 Length = 1277 Score = 391 bits (197), Expect = e-105 Identities = 379/437 (86%), Gaps = 2/437 (0%) Strand = Plus / Plus Query: 96 atggcaacgctcaaggtcccctccaacgtccccgccctcgccgacgactgcgacaacctc 155 |||||||||||||||||||| ||| || || || ||||||| ||||||||| | || Sbjct: 85 atggcaacgctcaaggtcccagccactgttcctcccgtcgccgatgactgcgaccagctg 144 Query: 156 cgcaaggccttccaagggtggggcacgaacgaggcgctcatcatctccatcctgggccac 215 ||||| || |||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 145 cgcaaagcattccaagggtggggcacgaacgaggcgctcatcatctccatcctcggccac 204 Query: 216 cgcgacgccgcgcagcgccgcgccatccgcaagcact-acgccgacacctacggcgagga 274 |||||||||||||||||||||||||||||| || || ||||||| ||||||||||||| Sbjct: 205 cgcgacgccgcgcagcgccgcgccatccgcc-gcgcttacgccgaggcctacggcgagga 263 Query: 275 gctgctccggagcatcaccgacgggatctcaggcgacttcgagagggccgtgatcctgtg 334 ||| ||||| |||||| |||| |||||| ||||||||||||||||||||||||||||| Sbjct: 264 gctcctccgctccatcacggacgagatctccggcgacttcgagagggccgtgatcctgtg 323 Query: 335 gacgctggaccccgcggagcgggacgcggtgctcgccaacgagaccgccaagaagtggca 394 |||||||||||| |||||||| ||||||||||| ||||||||| | || ||||||| | Sbjct: 324 gacgctggacccagcggagcgcgacgcggtgctggccaacgaggcggcgcggaagtggaa 383 Query: 395 cccggggaaccccgtgctcgtcgagatcgcctgctcgcgcggctccgcgcagctcttcgc 454 || ||||||| ||||||||||||||||||||| ||||| |||||||||| ||||||| Sbjct: 384 gcccgggaaccgtgtgctcgtcgagatcgcctgcacgcgcacctccgcgcagatcttcgc 443 Query: 455 cgtcaggcaggcctaccatgaccgcttcaagcgctcgctcgaggaggacgtcgctgcgca 514 ||||||||| || || || || |||||||||||||| ||||| ||| |||||||||| Sbjct: 444 gaccaggcaggcttatcacgagcggttcaagcgctcgcttgaggaagacatcgctgcgca 503 Query: 515 cgtcaccggcgacttcc 531 |||||| || ||||||| Sbjct: 504 cgtcactggggacttcc 520
>gb|AY105151.1| Zea mays PCO072293 mRNA sequence Length = 1369 Score = 391 bits (197), Expect = e-105 Identities = 379/437 (86%), Gaps = 2/437 (0%) Strand = Plus / Plus Query: 96 atggcaacgctcaaggtcccctccaacgtccccgccctcgccgacgactgcgacaacctc 155 |||||||||||||||||||| ||| || || || ||||||| ||||||||| | || Sbjct: 102 atggcaacgctcaaggtcccagccactgttcctcccgtcgccgatgactgcgaccagctg 161 Query: 156 cgcaaggccttccaagggtggggcacgaacgaggcgctcatcatctccatcctgggccac 215 ||||| || |||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 162 cgcaaagcattccaagggtggggcacgaacgaggcgctcatcatctccatcctcggccac 221 Query: 216 cgcgacgccgcgcagcgccgcgccatccgcaagcact-acgccgacacctacggcgagga 274 |||||||||||||||||||||||||||||| || || ||||||| ||||||||||||| Sbjct: 222 cgcgacgccgcgcagcgccgcgccatccgcc-gcgcttacgccgaggcctacggcgagga 280 Query: 275 gctgctccggagcatcaccgacgggatctcaggcgacttcgagagggccgtgatcctgtg 334 ||| ||||| |||||| |||| |||||| ||||||||||||||||||||||||||||| Sbjct: 281 gctcctccgctccatcacggacgagatctccggcgacttcgagagggccgtgatcctgtg 340 Query: 335 gacgctggaccccgcggagcgggacgcggtgctcgccaacgagaccgccaagaagtggca 394 |||||||||||| |||||||| ||||||||||| ||||||||| | || ||||||| | Sbjct: 341 gacgctggacccagcggagcgcgacgcggtgctggccaacgaggcggcgcggaagtggaa 400 Query: 395 cccggggaaccccgtgctcgtcgagatcgcctgctcgcgcggctccgcgcagctcttcgc 454 || ||||||| ||||||||||||||||||||| ||||| |||||||||| ||||||| Sbjct: 401 gcccgggaaccgtgtgctcgtcgagatcgcctgcacgcgcacctccgcgcagatcttcgc 460 Query: 455 cgtcaggcaggcctaccatgaccgcttcaagcgctcgctcgaggaggacgtcgctgcgca 514 ||||||||| || || || || |||||||||||||| ||||| ||| |||||||||| Sbjct: 461 gaccaggcaggcttatcacgagcggttcaagcgctcgcttgaggaagacatcgctgcgca 520 Query: 515 cgtcaccggcgacttcc 531 |||||| || ||||||| Sbjct: 521 cgtcactggggacttcc 537
>ref|XM_467846.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1223 Score = 264 bits (133), Expect = 3e-67 Identities = 333/397 (83%), Gaps = 2/397 (0%) Strand = Plus / Plus Query: 133 tcgccgacgactgcgacaacctccgcaaggccttccaagggtggggcacgaacgaggcgc 192 ||||||| |||||||| | || |||||||| ||| |||||||||||||||||||| || Sbjct: 153 tcgccgaggactgcgagcagctgcgcaaggcgttcaaagggtggggcacgaacgagaagc 212 Query: 193 tcatcatctccatcctgggccaccgcgacgccgcgcagcgccgcgccatccgcaagcact 252 |||||||||||||||| | |||||||||||| ||||||||||| || |||||| || Sbjct: 213 tcatcatctccatcctcgcccaccgcgacgcggcgcagcgccgggcgatccgccgcgcct 272 Query: 253 acgccgacacctacggcgaggagctgctccggagcatcaccgacgggatctcaggcgact 312 ||||||| | |||||||||||||||||||| | ||| ||||| |||| ||| | | Sbjct: 273 acgccgaggcgtacggcgaggagctgctccgcgccctcaacgacgagatccacggcaaat 332 Query: 313 tcgagagggccgtgatcctgtggacgctggaccccgcggagcgggacgcggtgctcgcca 372 |||||||||| ||||||| ||||||||||||||| |||||||||||||||||||| || | Sbjct: 333 tcgagagggcggtgatccagtggacgctggacccggcggagcgggacgcggtgctggcga 392 Query: 373 acgagaccgccaagaagtggcacccggggaaccccgtgctcgtcgagatcgcctgctcgc 432 ||||| || | |||||||||||||||| || || ||||||||||||||| ||| ||| Sbjct: 393 acgaggaggcgaggaagtggcacccggggggccgcgcgctcgtcgagatcgcgtgcacgc 452 Query: 433 gcggctcc-gcgcagctcttcgccgtcaggcaggcctaccatgaccgcttcaagcgctcg 491 || |||| ||||||||||||| | | |||||| ||||| || ||||||||| | ||| Sbjct: 453 gc-actccatcgcagctcttcgctgcgaagcaggcgtaccacgagcgcttcaagaggtcg 511 Query: 492 ctcgaggaggacgtcgctgcgcacgtcaccggcgact 528 ||||||||||||||||| |||||| |||||||||||| Sbjct: 512 ctcgaggaggacgtcgcggcgcacatcaccggcgact 548
>dbj|AK101787.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033065F07, full insert sequence Length = 1223 Score = 256 bits (129), Expect = 7e-65 Identities = 332/397 (83%), Gaps = 2/397 (0%) Strand = Plus / Plus Query: 133 tcgccgacgactgcgacaacctccgcaaggccttccaagggtggggcacgaacgaggcgc 192 ||||||| |||||||| | || |||||||| ||| |||||||||||||||||||| || Sbjct: 153 tcgccgaggactgcgagcagctgcgcaaggcgttcaaagggtggggcacgaacgagaagc 212 Query: 193 tcatcatctccatcctgggccaccgcgacgccgcgcagcgccgcgccatccgcaagcact 252 |||||||||||||||| | |||||||||||| ||||||||||| || |||||| || Sbjct: 213 tcatcatctccatcctcgcccaccgcgacgcggcgcagcgccgggcgatccgccgcgcct 272 Query: 253 acgccgacacctacggcgaggagctgctccggagcatcaccgacgggatctcaggcgact 312 ||||||| | |||||||||||||||||||| | ||| ||||| |||| ||| | | Sbjct: 273 acgccgaggcgtacggcgaggagctgctccgcgccctcaacgacgagatccacggcaaat 332 Query: 313 tcgagagggccgtgatcctgtggacgctggaccccgcggagcgggacgcggtgctcgcca 372 |||||||||| ||||||| ||||||||||||||| |||||||||||||||||||| || Sbjct: 333 tcgagagggcggtgatccagtggacgctggacccggcggagcgggacgcggtgctggcgg 392 Query: 373 acgagaccgccaagaagtggcacccggggaaccccgtgctcgtcgagatcgcctgctcgc 432 ||||| || | |||||||||||||||| || || ||||||||||||||| ||| ||| Sbjct: 393 acgaggaggcgaggaagtggcacccggggggccgcgcgctcgtcgagatcgcgtgcacgc 452 Query: 433 gcggctcc-gcgcagctcttcgccgtcaggcaggcctaccatgaccgcttcaagcgctcg 491 || |||| ||||||||||||| | | |||||| ||||| || ||||||||| | ||| Sbjct: 453 gc-actccatcgcagctcttcgctgcgaagcaggcgtaccacgagcgcttcaagaggtcg 511 Query: 492 ctcgaggaggacgtcgctgcgcacgtcaccggcgact 528 ||||||||||||||||| |||||| |||||||||||| Sbjct: 512 ctcgaggaggacgtcgcggcgcacatcaccggcgact 548
>gb|AC169375.4| Sorghum bicolor clone SB_BBc0020O07, complete sequence Length = 117931 Score = 230 bits (116), Expect = 4e-57 Identities = 191/216 (88%) Strand = Plus / Minus Query: 316 agagggccgtgatcctgtggacgctggaccccgcggagcgggacgcggtgctcgccaacg 375 ||||||||||||||||||||||||||||||| |||||||| ||||||||||| ||||||| Sbjct: 48489 agagggccgtgatcctgtggacgctggacccagcggagcgcgacgcggtgctggccaacg 48430 Query: 376 agaccgccaagaagtggcacccggggaaccccgtgctcgtcgagatcgcctgctcgcgcg 435 || | || ||||||||| || ||||||| |||||||||||||||||||||| ||||| Sbjct: 48429 aggcggcgcggaagtggcagcccgggaaccgcgtgctcgtcgagatcgcctgcacgcgca 48370 Query: 436 gctccgcgcagctcttcgccgtcaggcaggcctaccatgaccgcttcaagcgctcgctcg 495 |||||||||| ||||||| | ||||||||| ||||| || || |||||||||||||| | Sbjct: 48369 cctccgcgcaggtcttcgcggccaggcaggcgtaccacgagcggttcaagcgctcgcttg 48310 Query: 496 aggaggacgtcgctgcgcacgtcaccggcgacttcc 531 |||||||| |||||||||||||||| || ||||||| Sbjct: 48309 aggaggacatcgctgcgcacgtcactggggacttcc 48274 Score = 85.7 bits (43), Expect = 1e-13 Identities = 88/103 (85%) Strand = Plus / Minus Query: 215 ccgcgacgccgcgcagcgccgcgccatccgcaagcactacgccgacacctacggcgagga 274 ||||||||||||||||||||||||||||||| ||||||||| || |||||||||| Sbjct: 48695 ccgcgacgccgcgcagcgccgcgccatccgccgcgcctacgccgaggcccacggcgagga 48636 Query: 275 gctgctccggagcatcaccgacgggatctcaggcgacttcgag 317 ||| ||||| |||||| |||| |||||| |||||||||||| Sbjct: 48635 gctcctccgctccatcacggacgagatctccggcgacttcgag 48593
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 220 bits (111), Expect = 4e-54 Identities = 194/222 (87%), Gaps = 6/222 (2%) Strand = Plus / Plus Query: 316 agagggccgtgatcctgtggacgctggaccccgcggagcgggacgcggtgctcgccaacg 375 ||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 6262084 agagggccgtgatcctgtggacgctggacccggcggagcgcgacgcggtgctcgccaacg 6262143 Query: 376 agaccgccaagaagtggcacccggggaac------cccgtgctcgtcgagatcgcctgct 429 || ||| | ||||||| |||| |||| | | |||||| ||||||||||| ||| Sbjct: 6262144 aggtcgcgaggaagtggtacccagggagcgggagccgcgtgctggtcgagatcgcgtgcg 6262203 Query: 430 cgcgcggctccgcgcagctcttcgccgtcaggcaggcctaccatgaccgcttcaagcgct 489 |||||||| |||||||||| ||||| ||||||||||||||||| || ||||||||||||| Sbjct: 6262204 cgcgcggccccgcgcagctgttcgcggtcaggcaggcctaccacgagcgcttcaagcgct 6262263 Query: 490 cgctcgaggaggacgtcgctgcgcacgtcaccggcgacttcc 531 ||||||||||||||||||| ||||||| ||| || ||||||| Sbjct: 6262264 cgctcgaggaggacgtcgcggcgcacgccactggtgacttcc 6262305 Score = 200 bits (101), Expect = 3e-48 Identities = 137/149 (91%) Strand = Plus / Plus Query: 169 aagggtggggcacgaacgaggcgctcatcatctccatcctgggccaccgcgacgccgcgc 228 |||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||| Sbjct: 6261826 aagggtggggcacgaacgaggcgctcatcatctccatcctggcccaccgcgacgcggcgc 6261885 Query: 229 agcgccgcgccatccgcaagcactacgccgacacctacggcgaggagctgctccggagca 288 |||| |||||||||||| ||||||||||||||||||||||||||| ||||| |||| Sbjct: 6261886 agcggcgcgccatccgccgcgcctacgccgacacctacggcgaggagctcctccgcagca 6261945 Query: 289 tcaccgacgggatctcaggcgacttcgag 317 ||||||||| |||||| |||||||||||| Sbjct: 6261946 tcaccgacgagatctccggcgacttcgag 6261974 Score = 73.8 bits (37), Expect = 5e-10 Identities = 67/77 (87%) Strand = Plus / Plus Query: 96 atggcaacgctcaaggtcccctccaacgtccccgccctcgccgacgactgcgacaacctc 155 ||||| ||||||| ||||||||| |||||| || ||||||||||||||||| | ||| Sbjct: 6261629 atggcgacgctcaccgtcccctccgccgtcccgcccgtcgccgacgactgcgaccagctc 6261688 Query: 156 cgcaaggccttccaagg 172 ||||||||||||||||| Sbjct: 6261689 cgcaaggccttccaagg 6261705
>dbj|AP004727.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0516A04 Length = 145107 Score = 220 bits (111), Expect = 4e-54 Identities = 194/222 (87%), Gaps = 6/222 (2%) Strand = Plus / Plus Query: 316 agagggccgtgatcctgtggacgctggaccccgcggagcgggacgcggtgctcgccaacg 375 ||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 56160 agagggccgtgatcctgtggacgctggacccggcggagcgcgacgcggtgctcgccaacg 56219 Query: 376 agaccgccaagaagtggcacccggggaac------cccgtgctcgtcgagatcgcctgct 429 || ||| | ||||||| |||| |||| | | |||||| ||||||||||| ||| Sbjct: 56220 aggtcgcgaggaagtggtacccagggagcgggagccgcgtgctggtcgagatcgcgtgcg 56279 Query: 430 cgcgcggctccgcgcagctcttcgccgtcaggcaggcctaccatgaccgcttcaagcgct 489 |||||||| |||||||||| ||||| ||||||||||||||||| || ||||||||||||| Sbjct: 56280 cgcgcggccccgcgcagctgttcgcggtcaggcaggcctaccacgagcgcttcaagcgct 56339 Query: 490 cgctcgaggaggacgtcgctgcgcacgtcaccggcgacttcc 531 ||||||||||||||||||| ||||||| ||| || ||||||| Sbjct: 56340 cgctcgaggaggacgtcgcggcgcacgccactggtgacttcc 56381 Score = 200 bits (101), Expect = 3e-48 Identities = 137/149 (91%) Strand = Plus / Plus Query: 169 aagggtggggcacgaacgaggcgctcatcatctccatcctgggccaccgcgacgccgcgc 228 |||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||| Sbjct: 55902 aagggtggggcacgaacgaggcgctcatcatctccatcctggcccaccgcgacgcggcgc 55961 Query: 229 agcgccgcgccatccgcaagcactacgccgacacctacggcgaggagctgctccggagca 288 |||| |||||||||||| ||||||||||||||||||||||||||| ||||| |||| Sbjct: 55962 agcggcgcgccatccgccgcgcctacgccgacacctacggcgaggagctcctccgcagca 56021 Query: 289 tcaccgacgggatctcaggcgacttcgag 317 ||||||||| |||||| |||||||||||| Sbjct: 56022 tcaccgacgagatctccggcgacttcgag 56050 Score = 73.8 bits (37), Expect = 5e-10 Identities = 67/77 (87%) Strand = Plus / Plus Query: 96 atggcaacgctcaaggtcccctccaacgtccccgccctcgccgacgactgcgacaacctc 155 ||||| ||||||| ||||||||| |||||| || ||||||||||||||||| | ||| Sbjct: 55705 atggcgacgctcaccgtcccctccgccgtcccgcccgtcgccgacgactgcgaccagctc 55764 Query: 156 cgcaaggccttccaagg 172 ||||||||||||||||| Sbjct: 55765 cgcaaggccttccaagg 55781
>gb|AF542967.1| Triticum aestivum annexin P35-like mRNA, partial sequence Length = 766 Score = 210 bits (106), Expect = 3e-51 Identities = 175/198 (88%) Strand = Plus / Plus Query: 334 ggacgctggaccccgcggagcgggacgcggtgctcgccaacgagaccgccaagaagtggc 393 ||||||||||||| |||||||||||||| | ||| ||| |||| ||||||||||||| Sbjct: 5 ggacgctggacccggcggagcgggacgcagagctggccggcgaggaggccaagaagtggc 64 Query: 394 acccggggaaccccgtgctcgtcgagatcgcctgctcgcgcggctccgcgcagctcttcg 453 | |||||| || || |||||| |||||||||||| ||||| | ||||||||||||||| Sbjct: 65 agccggggggccgcgcgctcgtggagatcgcctgcgcgcgcacccccgcgcagctcttcg 124 Query: 454 ccgtcaggcaggcctaccatgaccgcttcaagcgctcgctcgaggaggacgtcgctgcgc 513 ||| ||||||||||||||| ||||||||||||||||||||||||||||||||||| |||| Sbjct: 125 ccgccaggcaggcctaccacgaccgcttcaagcgctcgctcgaggaggacgtcgccgcgc 184 Query: 514 acgtcaccggcgacttcc 531 ||||||||||||| |||| Sbjct: 185 acgtcaccggcgaattcc 202
>emb|X98245.1|ZMANNP35 Z.mays mRNA for annexin p35 Length = 1257 Score = 167 bits (84), Expect = 5e-38 Identities = 186/220 (84%) Strand = Plus / Plus Query: 312 ttcgagagggccgtgatcctgtggacgctggaccccgcggagcgggacgcggtgctcgcc 371 ||||||||||| |||||||||||||||||||||||||||||| ||||||||||||| || Sbjct: 348 ttcgagagggcggtgatcctgtggacgctggaccccgcggagagggacgcggtgctggcg 407 Query: 372 aacgagaccgccaagaagtggcacccggggaaccccgtgctcgtcgagatcgcctgctcg 431 |||||| || |||||| | ||||| || || || ||| || |||||||| ||| || Sbjct: 408 aacgaggaggcgaagaagagccaccccggcggccgcgcgctggtggagatcgcgtgcgcg 467 Query: 432 cgcggctccgcgcagctcttcgccgtcaggcaggcctaccatgaccgcttcaagcgctcg 491 ||| ||||||||||||| || |||| |||||| ||||||||||| || ||||| ||| Sbjct: 468 cgcacgcccgcgcagctctttgcggtcaagcaggcgtaccatgaccggtttaagcgatcg 527 Query: 492 ctcgaggaggacgtcgctgcgcacgtcaccggcgacttcc 531 |||||||||||||| || ||||| |||||||||||||||| Sbjct: 528 ctcgaggaggacgttgccgcgcatgtcaccggcgacttcc 567 Score = 95.6 bits (48), Expect = 1e-16 Identities = 105/124 (84%) Strand = Plus / Plus Query: 122 cgtccccgccctcgccgacgactgcgacaacctccgcaaggccttccaagggtggggcac 181 |||||| ||| ||||||| |||||||| | |||| |||||||||| |||| |||||||| Sbjct: 158 cgtcccggccgtcgccgaggactgcgagcagctccacaaggccttcgaaggttggggcac 217 Query: 182 gaacgaggcgctcatcatctccatcctgggccaccgcgacgccgcgcagcgccgcgccat 241 |||||| || |||||||||||||||| ||||||| ||||||||||| |||||| || Sbjct: 218 caacgagaaactgatcatctccatcctggcccaccgcaacgccgcgcaggcccgcgcgat 277 Query: 242 ccgc 245 |||| Sbjct: 278 ccgc 281
>gb|AY105105.1| Zea mays PCO122403 mRNA sequence Length = 1401 Score = 167 bits (84), Expect = 5e-38 Identities = 186/220 (84%) Strand = Plus / Plus Query: 312 ttcgagagggccgtgatcctgtggacgctggaccccgcggagcgggacgcggtgctcgcc 371 ||||||||||| |||||||||||||||||||||||||||||| ||||||||||||| || Sbjct: 442 ttcgagagggcggtgatcctgtggacgctggaccccgcggagagggacgcggtgctggcg 501 Query: 372 aacgagaccgccaagaagtggcacccggggaaccccgtgctcgtcgagatcgcctgctcg 431 |||||| || |||||| | ||||| || || || ||| || |||||||| ||| || Sbjct: 502 aacgaggaggcgaagaagagccaccccggcggccgcgcgctggtggagatcgcgtgcgcg 561 Query: 432 cgcggctccgcgcagctcttcgccgtcaggcaggcctaccatgaccgcttcaagcgctcg 491 ||| ||||||||||||| || |||| |||||| ||||||||||| || ||||| ||| Sbjct: 562 cgcacgcccgcgcagctctttgcggtcaagcaggcgtaccatgaccggtttaagcgatcg 621 Query: 492 ctcgaggaggacgtcgctgcgcacgtcaccggcgacttcc 531 |||||||||||||| || ||||| |||||||||||||||| Sbjct: 622 ctcgaggaggacgttgccgcgcatgtcaccggcgacttcc 661 Score = 111 bits (56), Expect = 2e-21 Identities = 107/124 (86%) Strand = Plus / Plus Query: 122 cgtccccgccctcgccgacgactgcgacaacctccgcaaggccttccaagggtggggcac 181 |||||| ||| ||||||| |||||||| | |||| |||||| ||| |||| |||||||| Sbjct: 252 cgtcccggccgtcgccgaggactgcgagcagctccacaaggctttcgaaggttggggcac 311 Query: 182 gaacgaggcgctcatcatctccatcctgggccaccgcgacgccgcgcagcgccgcgccat 241 |||||| ||| |||||||||||||||| ||||||| ||||||||||||||||||| || Sbjct: 312 caacgagaagctgatcatctccatcctggcccaccgcaacgccgcgcagcgccgcgcgat 371 Query: 242 ccgc 245 |||| Sbjct: 372 ccgc 375
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 163 bits (82), Expect = 7e-37 Identities = 183/214 (85%), Gaps = 2/214 (0%) Strand = Plus / Minus Query: 316 agagggccgtgatcctgtggacgctggaccccgcggagcgggacgcggtgctcgccaacg 375 ||||||| ||||||| ||||||||||||||| |||||||||||||||||||| || |||| Sbjct: 31718402 agagggcggtgatccagtggacgctggacccggcggagcgggacgcggtgctggcgaacg 31718343 Query: 376 agaccgccaagaagtggcacccggggaaccccgtgctcgtcgagatcgcctgctcgcgcg 435 || || | |||||||||||||||| || || ||||||||||||||| ||| ||||| Sbjct: 31718342 aggaggcgaggaagtggcacccggggggccgcgcgctcgtcgagatcgcgtgcacgcgc- 31718284 Query: 436 gctcc-gcgcagctcttcgccgtcaggcaggcctaccatgaccgcttcaagcgctcgctc 494 |||| ||||||||||||| | | |||||| ||||| || ||||||||| | |||||| Sbjct: 31718283 actccatcgcagctcttcgctgcgaagcaggcgtaccacgagcgcttcaagaggtcgctc 31718224 Query: 495 gaggaggacgtcgctgcgcacgtcaccggcgact 528 |||||||||||||| |||||| |||||||||||| Sbjct: 31718223 gaggaggacgtcgcggcgcacatcaccggcgact 31718190 Score = 107 bits (54), Expect = 4e-20 Identities = 99/114 (86%) Strand = Plus / Minus Query: 170 agggtggggcacgaacgaggcgctcatcatctccatcctgggccaccgcgacgccgcgca 229 ||||||||||||||||||| |||||||||||||||||| | |||||||||||| ||||| Sbjct: 31718644 agggtggggcacgaacgagaagctcatcatctccatcctcgcccaccgcgacgcggcgca 31718585 Query: 230 gcgccgcgccatccgcaagcactacgccgacacctacggcgaggagctgctccg 283 |||||| || |||||| ||||||||| | |||||||||||||||||||| Sbjct: 31718584 gcgccgggcgatccgccgcgcctacgccgaggcgtacggcgaggagctgctccg 31718531
>dbj|AP005012.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0627E03 Length = 159861 Score = 163 bits (82), Expect = 7e-37 Identities = 183/214 (85%), Gaps = 2/214 (0%) Strand = Plus / Minus Query: 316 agagggccgtgatcctgtggacgctggaccccgcggagcgggacgcggtgctcgccaacg 375 ||||||| ||||||| ||||||||||||||| |||||||||||||||||||| || |||| Sbjct: 14200 agagggcggtgatccagtggacgctggacccggcggagcgggacgcggtgctggcgaacg 14141 Query: 376 agaccgccaagaagtggcacccggggaaccccgtgctcgtcgagatcgcctgctcgcgcg 435 || || | |||||||||||||||| || || ||||||||||||||| ||| ||||| Sbjct: 14140 aggaggcgaggaagtggcacccggggggccgcgcgctcgtcgagatcgcgtgcacgcgc- 14082 Query: 436 gctcc-gcgcagctcttcgccgtcaggcaggcctaccatgaccgcttcaagcgctcgctc 494 |||| ||||||||||||| | | |||||| ||||| || ||||||||| | |||||| Sbjct: 14081 actccatcgcagctcttcgctgcgaagcaggcgtaccacgagcgcttcaagaggtcgctc 14022 Query: 495 gaggaggacgtcgctgcgcacgtcaccggcgact 528 |||||||||||||| |||||| |||||||||||| Sbjct: 14021 gaggaggacgtcgcggcgcacatcaccggcgact 13988 Score = 107 bits (54), Expect = 4e-20 Identities = 99/114 (86%) Strand = Plus / Minus Query: 170 agggtggggcacgaacgaggcgctcatcatctccatcctgggccaccgcgacgccgcgca 229 ||||||||||||||||||| |||||||||||||||||| | |||||||||||| ||||| Sbjct: 14442 agggtggggcacgaacgagaagctcatcatctccatcctcgcccaccgcgacgcggcgca 14383 Query: 230 gcgccgcgccatccgcaagcactacgccgacacctacggcgaggagctgctccg 283 |||||| || |||||| ||||||||| | |||||||||||||||||||| Sbjct: 14382 gcgccgggcgatccgccgcgcctacgccgaggcgtacggcgaggagctgctccg 14329
>dbj|AP004119.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1288_G09 Length = 109672 Score = 163 bits (82), Expect = 7e-37 Identities = 183/214 (85%), Gaps = 2/214 (0%) Strand = Plus / Minus Query: 316 agagggccgtgatcctgtggacgctggaccccgcggagcgggacgcggtgctcgccaacg 375 ||||||| ||||||| ||||||||||||||| |||||||||||||||||||| || |||| Sbjct: 98189 agagggcggtgatccagtggacgctggacccggcggagcgggacgcggtgctggcgaacg 98130 Query: 376 agaccgccaagaagtggcacccggggaaccccgtgctcgtcgagatcgcctgctcgcgcg 435 || || | |||||||||||||||| || || ||||||||||||||| ||| ||||| Sbjct: 98129 aggaggcgaggaagtggcacccggggggccgcgcgctcgtcgagatcgcgtgcacgcgc- 98071 Query: 436 gctcc-gcgcagctcttcgccgtcaggcaggcctaccatgaccgcttcaagcgctcgctc 494 |||| ||||||||||||| | | |||||| ||||| || ||||||||| | |||||| Sbjct: 98070 actccatcgcagctcttcgctgcgaagcaggcgtaccacgagcgcttcaagaggtcgctc 98011 Query: 495 gaggaggacgtcgctgcgcacgtcaccggcgact 528 |||||||||||||| |||||| |||||||||||| Sbjct: 98010 gaggaggacgtcgcggcgcacatcaccggcgact 97977 Score = 107 bits (54), Expect = 4e-20 Identities = 99/114 (86%) Strand = Plus / Minus Query: 170 agggtggggcacgaacgaggcgctcatcatctccatcctgggccaccgcgacgccgcgca 229 ||||||||||||||||||| |||||||||||||||||| | |||||||||||| ||||| Sbjct: 98431 agggtggggcacgaacgagaagctcatcatctccatcctcgcccaccgcgacgcggcgca 98372 Query: 230 gcgccgcgccatccgcaagcactacgccgacacctacggcgaggagctgctccg 283 |||||| || |||||| ||||||||| | |||||||||||||||||||| Sbjct: 98371 gcgccgggcgatccgccgcgcctacgccgaggcgtacggcgaggagctgctccg 98318
>ref|XM_365261.1| Magnaporthe grisea 70-15 predicted protein (MG01963.4) partial mRNA Length = 603 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 70 caccggcaggcaggcacccggtc 92 ||||||||||||||||||||||| Sbjct: 402 caccggcaggcaggcacccggtc 424
>emb|X05115.1|MINCND Neurospora crassa mitochondrial ND4L and ND5 genes for NADH dehydrogenase subunits Length = 7763 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 5 tccacccctcccttcccccgccc 27 ||||||||||||||||||||||| Sbjct: 5413 tccacccctcccttcccccgccc 5435
>emb|X14681.1|MTNCER3 Neurospora crassa mitochondrial DNA for new stopper mutant ER-3 recombined region Length = 839 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 5 tccacccctcccttcccccgccc 27 ||||||||||||||||||||||| Sbjct: 392 tccacccctcccttcccccgccc 414
>ref|NM_186003.1| Oryza sativa (japonica cultivar-group), mRNA Length = 912 Score = 44.1 bits (22), Expect = 0.46 Identities = 34/38 (89%) Strand = Plus / Plus Query: 325 tgatcctgtggacgctggaccccgcggagcgggacgcg 362 |||||||||||||| ||||||| || || ||||||||| Sbjct: 287 tgatcctgtggacgatggacccggcagaacgggacgcg 324
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Plus Query: 216 cgcgacgccgcgcagcgccgcgccat 241 |||| ||||||||||||||||||||| Sbjct: 2138425 cgcgtcgccgcgcagcgccgcgccat 2138450
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 44.1 bits (22), Expect = 0.46 Identities = 34/38 (89%) Strand = Plus / Minus Query: 325 tgatcctgtggacgctggaccccgcggagcgggacgcg 362 |||||||||||||| ||||||| || || ||||||||| Sbjct: 27748108 tgatcctgtggacgatggacccggcagaacgggacgcg 27748071
>gb|U75930.2|OPU75930 Orgyia pseudotsugata multicapsid nucleopolyhedrovirus, complete genome Length = 131995 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 217 gcgacgccgcgcagcgccgcgc 238 |||||||||||||||||||||| Sbjct: 41779 gcgacgccgcgcagcgccgcgc 41758
>dbj|BA000013.4| Mesorhizobium loti MAFF303099 pMLa DNA, cpmplete genome Length = 351911 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Plus Query: 201 tccatcctgggccaccgcgacgccgc 226 |||||||||| ||||||||||||||| Sbjct: 81669 tccatcctggtccaccgcgacgccgc 81694
>dbj|AP004378.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0496C02 Length = 148419 Score = 44.1 bits (22), Expect = 0.46 Identities = 34/38 (89%) Strand = Plus / Minus Query: 325 tgatcctgtggacgctggaccccgcggagcgggacgcg 362 |||||||||||||| ||||||| || || ||||||||| Sbjct: 40487 tgatcctgtggacgatggacccggcagaacgggacgcg 40450
>dbj|AP003833.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1477_F01 Length = 158792 Score = 44.1 bits (22), Expect = 0.46 Identities = 34/38 (89%) Strand = Plus / Minus Query: 325 tgatcctgtggacgctggaccccgcggagcgggacgcg 362 |||||||||||||| ||||||| || || ||||||||| Sbjct: 127210 tgatcctgtggacgatggacccggcagaacgggacgcg 127173
>gb|AF503433.1| Sorghum bicolor BAC 170F8, complete sequence Length = 142376 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 221 cgccgcgcagcgccgcgccatccgc 245 |||||||| |||||||||||||||| Sbjct: 44848 cgccgcgccgcgccgcgccatccgc 44872
>gb|AC112208.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0015P05 map C53961S, complete sequence Length = 175121 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 223 ccgcgcagcgccgcgccatcc 243 ||||||||||||||||||||| Sbjct: 40183 ccgcgcagcgccgcgccatcc 40203
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 216 cgcgacgccgcgcagcgccgc 236 ||||||||||||||||||||| Sbjct: 62205 cgcgacgccgcgcagcgccgc 62225
>gb|AC016023.8| Drosophila melanogaster clone BACR16F16, complete sequence Length = 186404 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 442 cgcagctcttcgccgtcaggcaggc 466 ||||||||||||||||| ||||||| Sbjct: 22284 cgcagctcttcgccgtcgggcaggc 22308
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome Length = 3345170 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 218 cgacgccgcgcagcgccgcgccatc 242 |||||||||||||| |||||||||| Sbjct: 978422 cgacgccgcgcagctccgcgccatc 978398
>gb|BT011436.1| Drosophila melanogaster RH55725 full insert cDNA Length = 2298 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 442 cgcagctcttcgccgtcaggcaggc 466 ||||||||||||||||| ||||||| Sbjct: 261 cgcagctcttcgccgtcgggcaggc 285
>gb|BT011433.1| Drosophila melanogaster RH57784 full insert cDNA Length = 3074 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 442 cgcagctcttcgccgtcaggcaggc 466 ||||||||||||||||| ||||||| Sbjct: 1037 cgcagctcttcgccgtcgggcaggc 1061
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 216 cgcgacgccgcgcagcgccgc 236 ||||||||||||||||||||| Sbjct: 446565 cgcgacgccgcgcagcgccgc 446545
>ref|NM_204293.1| Gallus gallus calcium channel, voltage-dependent, L type, alpha 1B subunit (CACNA1B), mRNA Length = 7966 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 206 cctgggccaccgcgacgccgc 226 ||||||||||||||||||||| Sbjct: 6904 cctgggccaccgcgacgccgc 6924
>ref|NM_170576.1| Drosophila melanogaster fat facets CG1945-RC, transcript variant C (faf), mRNA Length = 8668 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 442 cgcagctcttcgccgtcaggcaggc 466 ||||||||||||||||| ||||||| Sbjct: 123 cgcagctcttcgccgtcgggcaggc 147
>ref|NM_079873.3| Drosophila melanogaster fat facets CG1945-RA, transcript variant A (faf), mRNA Length = 9090 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 442 cgcagctcttcgccgtcaggcaggc 466 ||||||||||||||||| ||||||| Sbjct: 123 cgcagctcttcgccgtcgggcaggc 147
>gb|AY075439.1| Drosophila melanogaster RE01547 full length cDNA Length = 1171 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 442 cgcagctcttcgccgtcaggcaggc 466 ||||||||||||||||| ||||||| Sbjct: 123 cgcagctcttcgccgtcgggcaggc 147
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 223 ccgcgcagcgccgcgccatcc 243 ||||||||||||||||||||| Sbjct: 11253825 ccgcgcagcgccgcgccatcc 11253845 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 119 caacgtccccgccctcgccgacga 142 ||||||||||||| |||||||||| Sbjct: 25744572 caacgtccccgccttcgccgacga 25744595
>gb|AC007469.7|AC007469 Drosophila melanogaster, chromosome 3R, region 100D1-100F2, BAC clone BACR48C22, complete sequence Length = 181446 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 442 cgcagctcttcgccgtcaggcaggc 466 ||||||||||||||||| ||||||| Sbjct: 147361 cgcagctcttcgccgtcgggcaggc 147385
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 366 ctcgccaacgagaccgccaag 386 ||||||||||||||||||||| Sbjct: 2896182 ctcgccaacgagaccgccaag 2896162
>gb|AF173015.1|AF173015 Gallus gallus N-type calcium channel alpha-1B cdB4 variant (CACHA1B) mRNA, complete cds Length = 7887 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 206 cctgggccaccgcgacgccgc 226 ||||||||||||||||||||| Sbjct: 6791 cctgggccaccgcgacgccgc 6811
>gb|AF173014.1|AF173014 Gallus gallus N-type calcium channel alpha-1B cdB3 variant (CACHA1B) mRNA, complete cds Length = 7892 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 206 cctgggccaccgcgacgccgc 226 ||||||||||||||||||||| Sbjct: 6796 cctgggccaccgcgacgccgc 6816
>gb|AF173013.1|AF173013 Gallus gallus N-type calcium channel alpha-1B cdB2 variant (CACHA1B) mRNA, complete cds Length = 7995 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 206 cctgggccaccgcgacgccgc 226 ||||||||||||||||||||| Sbjct: 6899 cctgggccaccgcgacgccgc 6919
>gb|AF173012.1|AF173012 Gallus gallus N-type calcium channel alpha-1B cdB1 variant (CACHA1B) mRNA, complete cds Length = 8000 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 206 cctgggccaccgcgacgccgc 226 ||||||||||||||||||||| Sbjct: 6904 cctgggccaccgcgacgccgc 6924
>gb|AF173017.1|AF173017 Gallus gallus N-type calcium channel alpha-1B cdB6 variant (CACHA1B) mRNA, complete cds Length = 7962 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 206 cctgggccaccgcgacgccgc 226 ||||||||||||||||||||| Sbjct: 6866 cctgggccaccgcgacgccgc 6886
>gb|AF173019.1|AF173019 Gallus gallus N-type calcium channel alpha-1B cdB8 variant (CACHA1B) mRNA, complete cds Length = 7920 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 206 cctgggccaccgcgacgccgc 226 ||||||||||||||||||||| Sbjct: 6824 cctgggccaccgcgacgccgc 6844
>gb|AF173018.1|AF173018 Gallus gallus N-type calcium channel alpha-1B cdB7 variant (CACHA1B) mRNA, complete cds Length = 7925 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 206 cctgggccaccgcgacgccgc 226 ||||||||||||||||||||| Sbjct: 6829 cctgggccaccgcgacgccgc 6849
>gb|AF173016.1|AF173016 Gallus gallus N-type calcium channel alpha-1B cdB5 variant (CACHA1B) mRNA, complete cds Length = 7967 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 206 cctgggccaccgcgacgccgc 226 ||||||||||||||||||||| Sbjct: 6871 cctgggccaccgcgacgccgc 6891
>gb|AE003779.2| Drosophila melanogaster chromosome 3R, section 117 of 118 of the complete sequence Length = 232050 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 442 cgcagctcttcgccgtcaggcaggc 466 ||||||||||||||||| ||||||| Sbjct: 186633 cgcagctcttcgccgtcgggcaggc 186657
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 223 ccgcgcagcgccgcgccatcc 243 ||||||||||||||||||||| Sbjct: 11333014 ccgcgcagcgccgcgccatcc 11333034 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 119 caacgtccccgccctcgccgacga 142 ||||||||||||| |||||||||| Sbjct: 26063242 caacgtccccgccttcgccgacga 26063265
>gb|CP000150.1| Burkholderia sp. 383 chromosome 3, complete sequence Length = 1395069 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 218 cgacgccgcgcagcgccgcg 237 |||||||||||||||||||| Sbjct: 398619 cgacgccgcgcagcgccgcg 398600
>ref|NM_190481.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2532 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 510 gcgcacgtcaccggcgacttcccg 533 |||||||||||| ||||||||||| Sbjct: 1171 gcgcacgtcacctgcgacttcccg 1194
>ref|XM_322566.1| Neurospora crassa OR74A hypothetical protein (NCU00481.1) partial mRNA Length = 3249 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 gacctcgagatcccgcatcg 47 |||||||||||||||||||| Sbjct: 1938 gacctcgagatcccgcatcg 1919
>ref|XM_951073.1| Neurospora crassa OR74A hypothetical protein (NCU00481.1) partial mRNA Length = 3249 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 gacctcgagatcccgcatcg 47 |||||||||||||||||||| Sbjct: 1938 gacctcgagatcccgcatcg 1919
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 216 cgcgacgccgcgcagcgccgcgcc 239 |||| ||||||||||||||||||| Sbjct: 818197 cgcgtcgccgcgcagcgccgcgcc 818220
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 218 cgacgccgcgcagcgccgcgccat 241 ||||| |||||||||||||||||| Sbjct: 5093055 cgacggcgcgcagcgccgcgccat 5093078
>emb|AL939109.1|SCO939109 Streptomyces coelicolor A3(2) complete genome; segment 6/29 Length = 277000 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 121 acgtccccgccctcgccgac 140 |||||||||||||||||||| Sbjct: 247057 acgtccccgccctcgccgac 247038
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 219 gacgccgcgcagcgccgcgccatc 242 ||||||||||||||||||| |||| Sbjct: 3102973 gacgccgcgcagcgccgcggcatc 3102950
>gb|AE005970.1| Caulobacter crescentus CB15 section 296 of 359 of the complete genome Length = 12680 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 236 cgccatccgcaagcactacgccga 259 |||||||||||||| ||||||||| Sbjct: 726 cgccatccgcaagctctacgccga 703
>gb|AC125783.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBb0039K08, complete sequence Length = 122163 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 119 caacgtccccgccctcgccgacga 142 ||||||||||||| |||||||||| Sbjct: 56915 caacgtccccgccttcgccgacga 56938
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 216 cgcgacgccgcgcagcgccgcgcc 239 |||| ||||||||||||||||||| Sbjct: 1711686 cgcgtcgccgcgcagcgccgcgcc 1711709
>gb|AE006470.1| Chlorobium tepidum TLS, complete genome Length = 2154946 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 238 ccatccgcaagcactacgccgaca 261 |||||||||||| ||||||||||| Sbjct: 1898660 ccatccgcaagctctacgccgaca 1898683
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 510 gcgcacgtcaccggcgacttcccg 533 |||||||||||| ||||||||||| Sbjct: 35808525 gcgcacgtcacctgcgacttcccg 35808548
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 152 cctccgcaaggccttccaag 171 |||||||||||||||||||| Sbjct: 986455 cctccgcaaggccttccaag 986474
>gb|CP000252.1| Syntrophus aciditrophicus SB, complete genome Length = 3179300 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 67 cggcaccggcaggcaggcacccgg 90 |||||||||||||||||| ||||| Sbjct: 2741828 cggcaccggcaggcaggctcccgg 2741805
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 213 caccgcgacgccgcgcagcg 232 |||||||||||||||||||| Sbjct: 4897709 caccgcgacgccgcgcagcg 4897690
>dbj|AP003271.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0506B12 Length = 170759 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 510 gcgcacgtcaccggcgacttcccg 533 |||||||||||| ||||||||||| Sbjct: 72983 gcgcacgtcacctgcgacttcccg 73006
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 210 ggccaccgcgacgccgcgcagcgc 233 |||||||||| ||||||||||||| Sbjct: 4026499 ggccaccgcgccgccgcgcagcgc 4026476
>dbj|AK100241.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023054P13, full insert sequence Length = 2899 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 510 gcgcacgtcaccggcgacttcccg 533 |||||||||||| ||||||||||| Sbjct: 1320 gcgcacgtcacctgcgacttcccg 1343
>dbj|AK068400.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013151M04, full insert sequence Length = 2525 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 510 gcgcacgtcaccggcgacttcccg 533 |||||||||||| ||||||||||| Sbjct: 946 gcgcacgtcacctgcgacttcccg 969
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 240 atccgcaagcactacgccga 259 |||||||||||||||||||| Sbjct: 1732392 atccgcaagcactacgccga 1732411
>dbj|AK066013.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013047I12, full insert sequence Length = 2195 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 510 gcgcacgtcaccggcgacttcccg 533 |||||||||||| ||||||||||| Sbjct: 594 gcgcacgtcacctgcgacttcccg 617
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 219 gacgccgcgcagcgccgcgccatc 242 ||||||||||||||||||| |||| Sbjct: 3110199 gacgccgcgcagcgccgcggcatc 3110176
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 344 ccccgcggagcgggacgcggtgctcgcc 371 |||||||| |||||||||||||||||| Sbjct: 2157010 ccccgcggcccgggacgcggtgctcgcc 2156983 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,898,859 Number of Sequences: 3902068 Number of extensions: 2898859 Number of successful extensions: 70456 Number of sequences better than 10.0: 73 Number of HSP's better than 10.0 without gapping: 75 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 66902 Number of HSP's gapped (non-prelim): 3534 length of query: 534 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 511 effective length of database: 17,143,297,704 effective search space: 8760225126744 effective search space used: 8760225126744 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
