ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart44d03
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|XM_479036.1| Oryza sativa (japonica cultivar-group), mRNA 60 8e-06
2ref|XM_506447.1| PREDICTED Oryza sativa (japonica cultivar-group... 60 8e-06
3ref|XM_479031.1| Oryza sativa (japonica cultivar-group), mRNA 60 8e-06
4dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 60 8e-06
5dbj|AP003840.2| Oryza sativa (japonica cultivar-group) genomic D... 60 8e-06
6dbj|AK106010.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 8e-06
7dbj|AK068696.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 8e-06
8dbj|AK062673.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 8e-06
9gb|AY112347.1| Zea mays CL32321_1 mRNA sequence 60 8e-06
10ref|XM_479032.1| Oryza sativa (japonica cultivar-group), mRNA 56 1e-04
11ref|XM_507388.1| PREDICTED Oryza sativa (japonica cultivar-group... 56 1e-04
12ref|XM_506448.1| PREDICTED Oryza sativa (japonica cultivar-group... 56 1e-04
13dbj|AK106214.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 1e-04
14dbj|AK105918.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 1e-04
15dbj|AK070771.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 1e-04
16gb|AC144762.3| Mus musculus BAC clone RP24-95D6 from 3, complete... 42 1.9
17gb|BC109470.1| Danio rerio cDNA clone IMAGE:7395403, containing ... 40 7.5
18ref|XM_479030.1| Oryza sativa (japonica cultivar-group), mRNA 40 7.5
19gb|J00554.1|MUSIGKJC1 Mus musculus immunoglobulin kappa precurso... 40 7.5
20gb|AC156398.13| Mus musculus 6 BAC RP24-279F16 (Roswell Park Can... 40 7.5
21gb|BC083410.1| Danio rerio zgc:103514, mRNA (cDNA clone MGC:1035... 40 7.5
22gb|AF513926.1| Mus musculus strain C57BL/6 immunoglobulin kappa ... 40 7.5
23emb|AJ621385.1| Gallus gallus RAD50 gene (partial), IL5 gene, IR... 40 7.5
24gb|AC105217.4| Homo sapiens chromosome , clone RP11-384E22, comp... 40 7.5
25gb|AE012395.1| Xanthomonas campestris pv. campestris str. ATCC 3... 40 7.5
26dbj|AK036494.1| Mus musculus adult male bone cDNA, RIKEN full-le... 40 7.5
27gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, ... 40 7.5
28ref|NM_001006014.1| Danio rerio zgc:103514 (zgc:103514), mRNA 40 7.5
29dbj|BA000039.2| Thermosynechococcus elongatus BP-1 DNA, complete... 40 7.5
30gb|AC153612.6| Mus musculus 6 BAC RP23-435I4 (Roswell Park Cance... 40 7.5
31dbj|AK107490.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.5
32gb|AC124409.5| Mus musculus BAC clone RP24-262P14 from 8, comple... 40 7.5
33gb|AC159985.2| Gallus gallus BAC clone CH261-18F10 from chromoso... 40 7.5
34emb|AL713991.13| Mouse DNA sequence from clone RP23-132C16 on ch... 40 7.5
35gb|M34473.1|MUSIGKABM Mouse Ig processed pseudo-kappa-chain mRNA... 40 7.5

>ref|XM_479036.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 678

 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 57/66 (86%)
 Strand = Plus / Plus

                                                                       
Query: 84  tcttcctcgtggctctgctgctctcatgcagctccatgagcagtgcagcacgacacctag 143
           |||||||| |||| |||||||||||||| |||||||| ||||| ||||| ||  |||| |
Sbjct: 104 tcttcctcatggcgctgctgctctcatggagctccatcagcagcgcagctcgctacctgg 163

                 
Query: 144 aggagg 149
           ||||||
Sbjct: 164 aggagg 169



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 52/60 (86%)
 Strand = Plus / Plus

                                                                       
Query: 187 cccggagctgccaaagcccgaactcccgccgcaccccgtcatgcccgagctgccaaagcc 246
           ||||||||| || |||||||| || |||||||||| || | |||| ||||||||||||||
Sbjct: 192 cccggagcttccgaagcccgagctgccgccgcacctcgccgtgccggagctgccaaagcc 251



 Score = 40.1 bits (20), Expect = 7.5
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 365 caccctgctatgcccgagctcccgaagcctga 396
           ||||||||  |||| |||||||||||||||||
Sbjct: 349 caccctgcggtgccggagctcccgaagcctga 380



 Score = 40.1 bits (20), Expect = 7.5
 Identities = 74/92 (80%)
 Strand = Plus / Plus

                                                                       
Query: 437 aaggagcctgaagtgccacaccccatggcgccggaggtgccaaagcatgagctgccgccg 496
           |||| ||||||| |||||||||||  || ||||||  |||| |||| |||  ||||   |
Sbjct: 289 aaggtgcctgaactgccacaccccgaggtgccggaattgccgaagcctgaattgcctgag 348

                                           
Query: 497 caccctgctatgcccgagcccccgaagcctga 528
           ||||||||  |||| |||| ||||||||||||
Sbjct: 349 caccctgcggtgccggagctcccgaagcctga 380



 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 188 ccggagctgccaaagcccga 207
           ||||||||||||||||||||
Sbjct: 235 ccggagctgccaaagcccga 254



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>ref|XM_506447.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1634_B10.112
           mRNA
          Length = 1006

 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 51/58 (87%)
 Strand = Plus / Plus

                                                                     
Query: 188 ccggagctgccaaagcccgaactcccgccgcaccccgtcatgcccgagctgccaaagc 245
           |||||||| || ||||| || || ||||||||||||||| |||| |||||||||||||
Sbjct: 186 ccggagcttcccaagcctgagctgccgccgcaccccgtcgtgccggagctgccaaagc 243



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 51/59 (86%)
 Strand = Plus / Plus

                                                                      
Query: 188 ccggagctgccaaagcccgaactcccgccgcaccccgtcatgcccgagctgccaaagcc 246
           ||||||||||| |||| ||||   || |||||||||||| |||| ||||||||||||||
Sbjct: 324 ccggagctgcccaagcacgaagagccaccgcaccccgtcgtgccggagctgccaaagcc 382



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 54/63 (85%)
 Strand = Plus / Plus

                                                                       
Query: 84  tcttcctcgtggctctgctgctctcatgcagctccatgagcagtgcagcacgacacctag 143
           ||||||||||||| ||||||||||| |||||| ||||| |||  || ||||||| ||| |
Sbjct: 94  tcttcctcgtggcgctgctgctctcgtgcagcaccatgggcaacgctgcacgacgcctgg 153

              
Query: 144 agg 146
           |||
Sbjct: 154 agg 156



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 183 tcgtcccggagctgccaaagcccga 207
           |||| ||||||||||||||||||||
Sbjct: 361 tcgtgccggagctgccaaagcccga 385



 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 317 gtgccacaccccgtggtgccggag 340
           ||||||||||| ||||||||||||
Sbjct: 591 gtgccacaccctgtggtgccggag 614



 Score = 40.1 bits (20), Expect = 7.5
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 218 caccccgtcatgcccgagctgccaaagcctga 249
           ||||||||| |||| ||| |||||||||||||
Sbjct: 558 caccccgtcgtgccggagttgccaaagcctga 589



 Score = 40.1 bits (20), Expect = 7.5
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 215 ccgcaccccgtcatgcccgagctgccaaagcc 246
           |||||||||||| |||| |||||||| |||||
Sbjct: 474 ccgcaccccgtcgtgccggagctgccgaagcc 505



 Score = 40.1 bits (20), Expect = 7.5
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 466 gccggaggtgccaaagcatgagctgccgccgcaccc 501
           ||||||| | || |||| ||||||||||||||||||
Sbjct: 185 gccggagcttcccaagcctgagctgccgccgcaccc 220



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>ref|XM_479031.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1005

 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 51/58 (87%)
 Strand = Plus / Plus

                                                                     
Query: 188 ccggagctgccaaagcccgaactcccgccgcaccccgtcatgcccgagctgccaaagc 245
           |||||||| || ||||| || || ||||||||||||||| |||| |||||||||||||
Sbjct: 183 ccggagcttcccaagcctgagctgccgccgcaccccgtcgtgccggagctgccaaagc 240



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 51/59 (86%)
 Strand = Plus / Plus

                                                                      
Query: 188 ccggagctgccaaagcccgaactcccgccgcaccccgtcatgcccgagctgccaaagcc 246
           ||||||||||| |||| ||||   || |||||||||||| |||| ||||||||||||||
Sbjct: 321 ccggagctgcccaagcacgaagagccaccgcaccccgtcgtgccggagctgccaaagcc 379



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 54/63 (85%)
 Strand = Plus / Plus

                                                                       
Query: 84  tcttcctcgtggctctgctgctctcatgcagctccatgagcagtgcagcacgacacctag 143
           ||||||||||||| ||||||||||| |||||| ||||| |||  || ||||||| ||| |
Sbjct: 91  tcttcctcgtggcgctgctgctctcgtgcagcaccatgggcaacgctgcacgacgcctgg 150

              
Query: 144 agg 146
           |||
Sbjct: 151 agg 153



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 183 tcgtcccggagctgccaaagcccga 207
           |||| ||||||||||||||||||||
Sbjct: 358 tcgtgccggagctgccaaagcccga 382



 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 317 gtgccacaccccgtggtgccggag 340
           ||||||||||| ||||||||||||
Sbjct: 588 gtgccacaccctgtggtgccggag 611



 Score = 40.1 bits (20), Expect = 7.5
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 218 caccccgtcatgcccgagctgccaaagcctga 249
           ||||||||| |||| ||| |||||||||||||
Sbjct: 555 caccccgtcgtgccggagttgccaaagcctga 586



 Score = 40.1 bits (20), Expect = 7.5
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 215 ccgcaccccgtcatgcccgagctgccaaagcc 246
           |||||||||||| |||| |||||||| |||||
Sbjct: 471 ccgcaccccgtcgtgccggagctgccgaagcc 502



 Score = 40.1 bits (20), Expect = 7.5
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 466 gccggaggtgccaaagcatgagctgccgccgcaccc 501
           ||||||| | || |||| ||||||||||||||||||
Sbjct: 182 gccggagcttcccaagcctgagctgccgccgcaccc 217



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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 57/66 (86%)
 Strand = Plus / Minus

                                                                            
Query: 84       tcttcctcgtggctctgctgctctcatgcagctccatgagcagtgcagcacgacacctag 143
                |||||||| |||| |||||||||||||| |||||||| ||||| ||||| ||  |||| |
Sbjct: 24428254 tcttcctcatggcgctgctgctctcatggagctccatcagcagcgcagctcgctacctgg 24428195

                      
Query: 144      aggagg 149
                ||||||
Sbjct: 24428194 aggagg 24428189



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 51/58 (87%)
 Strand = Plus / Minus

                                                                          
Query: 188      ccggagctgccaaagcccgaactcccgccgcaccccgtcatgcccgagctgccaaagc 245
                |||||||| || ||||| || || ||||||||||||||| |||| |||||||||||||
Sbjct: 24417350 ccggagcttcccaagcctgagctgccgccgcaccccgtcgtgccggagctgccaaagc 24417293



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 52/60 (86%)
 Strand = Plus / Minus

                                                                            
Query: 187      cccggagctgccaaagcccgaactcccgccgcaccccgtcatgcccgagctgccaaagcc 246
                ||||||||| || |||||||| || |||||||||| || | |||| ||||||||||||||
Sbjct: 24428166 cccggagcttccgaagcccgagctgccgccgcacctcgccgtgccggagctgccaaagcc 24428107



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 58/68 (85%)
 Strand = Plus / Minus

                                                                            
Query: 183      tcgtcccggagctgccaaagcccgaactcccgccgcaccccgtcatgcccgagctgccaa 242
                |||| ||||||||||| |||| |||    ||||||||||||||| |||| |||||||| |
Sbjct: 24419311 tcgtgccggagctgcccaagcacgaggagccgccgcaccccgtcgtgccggagctgccga 24419252

                        
Query: 243      agcctgaa 250
                ||||||||
Sbjct: 24419251 agcctgaa 24419244



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 54/63 (85%)
 Strand = Plus / Minus

                                                                            
Query: 84       tcttcctcgtggctctgctgctctcatgcagctccatgagcagtgcagcacgacacctag 143
                ||||||||||||| ||||||||||| |||||| ||||| |||  || ||||||| ||| |
Sbjct: 24417442 tcttcctcgtggcgctgctgctctcgtgcagcaccatgggcaacgctgcacgacgcctgg 24417383

                   
Query: 144      agg 146
                |||
Sbjct: 24417382 agg 24417380



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 51/59 (86%)
 Strand = Plus / Minus

                                                                           
Query: 188      ccggagctgccaaagcccgaactcccgccgcaccccgtcatgcccgagctgccaaagcc 246
                ||||||||||| |||| ||||   || |||||||||||| |||| ||||||||||||||
Sbjct: 24417212 ccggagctgcccaagcacgaagagccaccgcaccccgtcgtgccggagctgccaaagcc 24417154



 Score = 46.1 bits (23), Expect = 0.12
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                   
Query: 212      ccgccgcaccccgtcatgcccgagctgccaaagcc 246
                ||||| ||||||||| |||| ||||||||||||||
Sbjct: 24419447 ccgccacaccccgtcgtgccggagctgccaaagcc 24419413



 Score = 44.1 bits (22), Expect = 0.48
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                      
Query: 98       ctgctgctctcatgcagctccatgagcagtgcagcacg 135
                ||||||||||| | ||||||||||||||| || |||||
Sbjct: 24419894 ctgctgctctcgtccagctccatgagcagcgcggcacg 24419857



 Score = 44.1 bits (22), Expect = 0.48
 Identities = 49/58 (84%)
 Strand = Plus / Minus

                                                                          
Query: 188      ccggagctgccaaagcccgaactcccgccgcaccccgtcatgcccgagctgccaaagc 245
                ||||||||||| |||| ||||   ||||||||||| ||| |||| |||||||| ||||
Sbjct: 24419348 ccggagctgcctaagcacgaagagccgccgcaccctgtcgtgccggagctgcccaagc 24419291



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 183      tcgtcccggagctgccaaagcccga 207
                |||| ||||||||||||||||||||
Sbjct: 24417175 tcgtgccggagctgccaaagcccga 24417151



 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 188      ccggagctgccaaagcccga 207
                ||||||||||||||||||||
Sbjct: 24428123 ccggagctgccaaagcccga 24428104



 Score = 40.1 bits (20), Expect = 7.5
 Identities = 74/92 (80%)
 Strand = Plus / Minus

                                                                            
Query: 437      aaggagcctgaagtgccacaccccatggcgccggaggtgccaaagcatgagctgccgccg 496
                |||| ||||||| |||||||||||  || ||||||  |||| |||| |||  ||||   |
Sbjct: 24428069 aaggtgcctgaactgccacaccccgaggtgccggaattgccgaagcctgaattgcctgag 24428010

                                                
Query: 497      caccctgctatgcccgagcccccgaagcctga 528
                ||||||||  |||| |||| ||||||||||||
Sbjct: 24428009 caccctgcggtgccggagctcccgaagcctga 24427978



 Score = 40.1 bits (20), Expect = 7.5
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                                
Query: 365      caccctgctatgcccgagctcccgaagcctga 396
                ||||||||  |||| |||||||||||||||||
Sbjct: 24428009 caccctgcggtgccggagctcccgaagcctga 24427978



 Score = 40.1 bits (20), Expect = 7.5
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                    
Query: 466      gccggaggtgccaaagcatgagctgccgccgcaccc 501
                ||||||| |||| |||||||||  ||||||||||||
Sbjct: 24419778 gccggagctgcccaagcatgaggagccgccgcaccc 24419743



 Score = 40.1 bits (20), Expect = 7.5
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                    
Query: 466      gccggaggtgccaaagcatgagctgccgccgcaccc 501
                ||||||| | || |||| ||||||||||||||||||
Sbjct: 24417351 gccggagcttcccaagcctgagctgccgccgcaccc 24417316



 Score = 40.1 bits (20), Expect = 7.5
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                                
Query: 215      ccgcaccccgtcatgcccgagctgccaaagcc 246
                |||||||||||| |||| |||||||| |||||
Sbjct: 24417062 ccgcaccccgtcgtgccggagctgccgaagcc 24417031



 Score = 40.1 bits (20), Expect = 7.5
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                                
Query: 218      caccccgtcatgcccgagctgccaaagcctga 249
                ||||||||| |||| ||| |||||||||||||
Sbjct: 24416978 caccccgtcgtgccggagttgccaaagcctga 24416947



 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 317      gtgccacaccccgtggtgccggag 340
                ||||||||||| ||||||||||||
Sbjct: 24416945 gtgccacaccctgtggtgccggag 24416922



 Score = 40.1 bits (20), Expect = 7.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 474      tgccaaagcatgagctgccgccgcaccc 501
                |||| |||| ||||||||||||||||||
Sbjct: 24413475 tgcccaagcctgagctgccgccgcaccc 24413448



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>dbj|AP003840.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1634_B10
          Length = 100294

 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 57/66 (86%)
 Strand = Plus / Minus

                                                                         
Query: 84    tcttcctcgtggctctgctgctctcatgcagctccatgagcagtgcagcacgacacctag 143
             |||||||| |||| |||||||||||||| |||||||| ||||| ||||| ||  |||| |
Sbjct: 54121 tcttcctcatggcgctgctgctctcatggagctccatcagcagcgcagctcgctacctgg 54062

                   
Query: 144   aggagg 149
             ||||||
Sbjct: 54061 aggagg 54056



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 51/58 (87%)
 Strand = Plus / Minus

                                                                       
Query: 188   ccggagctgccaaagcccgaactcccgccgcaccccgtcatgcccgagctgccaaagc 245
             |||||||| || ||||| || || ||||||||||||||| |||| |||||||||||||
Sbjct: 43217 ccggagcttcccaagcctgagctgccgccgcaccccgtcgtgccggagctgccaaagc 43160



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 52/60 (86%)
 Strand = Plus / Minus

                                                                         
Query: 187   cccggagctgccaaagcccgaactcccgccgcaccccgtcatgcccgagctgccaaagcc 246
             ||||||||| || |||||||| || |||||||||| || | |||| ||||||||||||||
Sbjct: 54033 cccggagcttccgaagcccgagctgccgccgcacctcgccgtgccggagctgccaaagcc 53974



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 58/68 (85%)
 Strand = Plus / Minus

                                                                         
Query: 183   tcgtcccggagctgccaaagcccgaactcccgccgcaccccgtcatgcccgagctgccaa 242
             |||| ||||||||||| |||| |||    ||||||||||||||| |||| |||||||| |
Sbjct: 45178 tcgtgccggagctgcccaagcacgaggagccgccgcaccccgtcgtgccggagctgccga 45119

                     
Query: 243   agcctgaa 250
             ||||||||
Sbjct: 45118 agcctgaa 45111



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 54/63 (85%)
 Strand = Plus / Minus

                                                                         
Query: 84    tcttcctcgtggctctgctgctctcatgcagctccatgagcagtgcagcacgacacctag 143
             ||||||||||||| ||||||||||| |||||| ||||| |||  || ||||||| ||| |
Sbjct: 43309 tcttcctcgtggcgctgctgctctcgtgcagcaccatgggcaacgctgcacgacgcctgg 43250

                
Query: 144   agg 146
             |||
Sbjct: 43249 agg 43247



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 51/59 (86%)
 Strand = Plus / Minus

                                                                        
Query: 188   ccggagctgccaaagcccgaactcccgccgcaccccgtcatgcccgagctgccaaagcc 246
             ||||||||||| |||| ||||   || |||||||||||| |||| ||||||||||||||
Sbjct: 43079 ccggagctgcccaagcacgaagagccaccgcaccccgtcgtgccggagctgccaaagcc 43021



 Score = 46.1 bits (23), Expect = 0.12
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                
Query: 212   ccgccgcaccccgtcatgcccgagctgccaaagcc 246
             ||||| ||||||||| |||| ||||||||||||||
Sbjct: 45314 ccgccacaccccgtcgtgccggagctgccaaagcc 45280



 Score = 44.1 bits (22), Expect = 0.48
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                   
Query: 98    ctgctgctctcatgcagctccatgagcagtgcagcacg 135
             ||||||||||| | ||||||||||||||| || |||||
Sbjct: 45761 ctgctgctctcgtccagctccatgagcagcgcggcacg 45724



 Score = 44.1 bits (22), Expect = 0.48
 Identities = 49/58 (84%)
 Strand = Plus / Minus

                                                                       
Query: 188   ccggagctgccaaagcccgaactcccgccgcaccccgtcatgcccgagctgccaaagc 245
             ||||||||||| |||| ||||   ||||||||||| ||| |||| |||||||| ||||
Sbjct: 45215 ccggagctgcctaagcacgaagagccgccgcaccctgtcgtgccggagctgcccaagc 45158



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 183   tcgtcccggagctgccaaagcccga 207
             |||| ||||||||||||||||||||
Sbjct: 43042 tcgtgccggagctgccaaagcccga 43018



 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 188   ccggagctgccaaagcccga 207
             ||||||||||||||||||||
Sbjct: 53990 ccggagctgccaaagcccga 53971



 Score = 40.1 bits (20), Expect = 7.5
 Identities = 74/92 (80%)
 Strand = Plus / Minus

                                                                         
Query: 437   aaggagcctgaagtgccacaccccatggcgccggaggtgccaaagcatgagctgccgccg 496
             |||| ||||||| |||||||||||  || ||||||  |||| |||| |||  ||||   |
Sbjct: 53936 aaggtgcctgaactgccacaccccgaggtgccggaattgccgaagcctgaattgcctgag 53877

                                             
Query: 497   caccctgctatgcccgagcccccgaagcctga 528
             ||||||||  |||| |||| ||||||||||||
Sbjct: 53876 caccctgcggtgccggagctcccgaagcctga 53845



 Score = 40.1 bits (20), Expect = 7.5
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 365   caccctgctatgcccgagctcccgaagcctga 396
             ||||||||  |||| |||||||||||||||||
Sbjct: 53876 caccctgcggtgccggagctcccgaagcctga 53845



 Score = 40.1 bits (20), Expect = 7.5
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                 
Query: 466   gccggaggtgccaaagcatgagctgccgccgcaccc 501
             ||||||| |||| |||||||||  ||||||||||||
Sbjct: 45645 gccggagctgcccaagcatgaggagccgccgcaccc 45610



 Score = 40.1 bits (20), Expect = 7.5
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                 
Query: 466   gccggaggtgccaaagcatgagctgccgccgcaccc 501
             ||||||| | || |||| ||||||||||||||||||
Sbjct: 43218 gccggagcttcccaagcctgagctgccgccgcaccc 43183



 Score = 40.1 bits (20), Expect = 7.5
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 215   ccgcaccccgtcatgcccgagctgccaaagcc 246
             |||||||||||| |||| |||||||| |||||
Sbjct: 42929 ccgcaccccgtcgtgccggagctgccgaagcc 42898



 Score = 40.1 bits (20), Expect = 7.5
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 218   caccccgtcatgcccgagctgccaaagcctga 249
             ||||||||| |||| ||| |||||||||||||
Sbjct: 42845 caccccgtcgtgccggagttgccaaagcctga 42814



 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 317   gtgccacaccccgtggtgccggag 340
             ||||||||||| ||||||||||||
Sbjct: 42812 gtgccacaccctgtggtgccggag 42789



 Score = 40.1 bits (20), Expect = 7.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 474   tgccaaagcatgagctgccgccgcaccc 501
             |||| |||| ||||||||||||||||||
Sbjct: 39342 tgcccaagcctgagctgccgccgcaccc 39315



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>dbj|AK106010.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-206-B01, full
           insert sequence
          Length = 1005

 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 51/58 (87%)
 Strand = Plus / Plus

                                                                     
Query: 188 ccggagctgccaaagcccgaactcccgccgcaccccgtcatgcccgagctgccaaagc 245
           |||||||| || ||||| || || ||||||||||||||| |||| |||||||||||||
Sbjct: 183 ccggagcttcccaagcctgagctgccgccgcaccccgtcgtgccggagctgccaaagc 240



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 51/59 (86%)
 Strand = Plus / Plus

                                                                      
Query: 188 ccggagctgccaaagcccgaactcccgccgcaccccgtcatgcccgagctgccaaagcc 246
           ||||||||||| |||| ||||   || |||||||||||| |||| ||||||||||||||
Sbjct: 321 ccggagctgcccaagcacgaagagccaccgcaccccgtcgtgccggagctgccaaagcc 379



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 54/63 (85%)
 Strand = Plus / Plus

                                                                       
Query: 84  tcttcctcgtggctctgctgctctcatgcagctccatgagcagtgcagcacgacacctag 143
           ||||||||||||| ||||||||||| |||||| ||||| |||  || ||||||| ||| |
Sbjct: 91  tcttcctcgtggcgctgctgctctcgtgcagcaccatgggcaacgctgcacgacgcctgg 150

              
Query: 144 agg 146
           |||
Sbjct: 151 agg 153



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 183 tcgtcccggagctgccaaagcccga 207
           |||| ||||||||||||||||||||
Sbjct: 358 tcgtgccggagctgccaaagcccga 382



 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 317 gtgccacaccccgtggtgccggag 340
           ||||||||||| ||||||||||||
Sbjct: 588 gtgccacaccctgtggtgccggag 611



 Score = 40.1 bits (20), Expect = 7.5
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 218 caccccgtcatgcccgagctgccaaagcctga 249
           ||||||||| |||| ||| |||||||||||||
Sbjct: 555 caccccgtcgtgccggagttgccaaagcctga 586



 Score = 40.1 bits (20), Expect = 7.5
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 215 ccgcaccccgtcatgcccgagctgccaaagcc 246
           |||||||||||| |||| |||||||| |||||
Sbjct: 471 ccgcaccccgtcgtgccggagctgccgaagcc 502



 Score = 40.1 bits (20), Expect = 7.5
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 466 gccggaggtgccaaagcatgagctgccgccgcaccc 501
           ||||||| | || |||| ||||||||||||||||||
Sbjct: 182 gccggagcttcccaagcctgagctgccgccgcaccc 217



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>dbj|AK068696.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013162L16, full
           insert sequence
          Length = 1006

 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 51/58 (87%)
 Strand = Plus / Plus

                                                                     
Query: 188 ccggagctgccaaagcccgaactcccgccgcaccccgtcatgcccgagctgccaaagc 245
           |||||||| || ||||| || || ||||||||||||||| |||| |||||||||||||
Sbjct: 186 ccggagcttcccaagcctgagctgccgccgcaccccgtcgtgccggagctgccaaagc 243



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 51/59 (86%)
 Strand = Plus / Plus

                                                                      
Query: 188 ccggagctgccaaagcccgaactcccgccgcaccccgtcatgcccgagctgccaaagcc 246
           ||||||||||| |||| ||||   || |||||||||||| |||| ||||||||||||||
Sbjct: 324 ccggagctgcccaagcacgaagagccaccgcaccccgtcgtgccggagctgccaaagcc 382



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 54/63 (85%)
 Strand = Plus / Plus

                                                                       
Query: 84  tcttcctcgtggctctgctgctctcatgcagctccatgagcagtgcagcacgacacctag 143
           ||||||||||||| ||||||||||| |||||| ||||| |||  || ||||||| ||| |
Sbjct: 94  tcttcctcgtggcgctgctgctctcgtgcagcaccatgggcaacgctgcacgacgcctgg 153

              
Query: 144 agg 146
           |||
Sbjct: 154 agg 156



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 183 tcgtcccggagctgccaaagcccga 207
           |||| ||||||||||||||||||||
Sbjct: 361 tcgtgccggagctgccaaagcccga 385



 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 317 gtgccacaccccgtggtgccggag 340
           ||||||||||| ||||||||||||
Sbjct: 591 gtgccacaccctgtggtgccggag 614



 Score = 40.1 bits (20), Expect = 7.5
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 218 caccccgtcatgcccgagctgccaaagcctga 249
           ||||||||| |||| ||| |||||||||||||
Sbjct: 558 caccccgtcgtgccggagttgccaaagcctga 589



 Score = 40.1 bits (20), Expect = 7.5
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 215 ccgcaccccgtcatgcccgagctgccaaagcc 246
           |||||||||||| |||| |||||||| |||||
Sbjct: 474 ccgcaccccgtcgtgccggagctgccgaagcc 505



 Score = 40.1 bits (20), Expect = 7.5
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 466 gccggaggtgccaaagcatgagctgccgccgcaccc 501
           ||||||| | || |||| ||||||||||||||||||
Sbjct: 185 gccggagcttcccaagcctgagctgccgccgcaccc 220



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>dbj|AK062673.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-105-G06, full
           insert sequence
          Length = 678

 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 57/66 (86%)
 Strand = Plus / Plus

                                                                       
Query: 84  tcttcctcgtggctctgctgctctcatgcagctccatgagcagtgcagcacgacacctag 143
           |||||||| |||| |||||||||||||| |||||||| ||||| ||||| ||  |||| |
Sbjct: 104 tcttcctcatggcgctgctgctctcatggagctccatcagcagcgcagctcgctacctgg 163

                 
Query: 144 aggagg 149
           ||||||
Sbjct: 164 aggagg 169



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 52/60 (86%)
 Strand = Plus / Plus

                                                                       
Query: 187 cccggagctgccaaagcccgaactcccgccgcaccccgtcatgcccgagctgccaaagcc 246
           ||||||||| || |||||||| || |||||||||| || | |||| ||||||||||||||
Sbjct: 192 cccggagcttccgaagcccgagctgccgccgcacctcgccgtgccggagctgccaaagcc 251



 Score = 40.1 bits (20), Expect = 7.5
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 365 caccctgctatgcccgagctcccgaagcctga 396
           ||||||||  |||| |||||||||||||||||
Sbjct: 349 caccctgcggtgccggagctcccgaagcctga 380



 Score = 40.1 bits (20), Expect = 7.5
 Identities = 74/92 (80%)
 Strand = Plus / Plus

                                                                       
Query: 437 aaggagcctgaagtgccacaccccatggcgccggaggtgccaaagcatgagctgccgccg 496
           |||| ||||||| |||||||||||  || ||||||  |||| |||| |||  ||||   |
Sbjct: 289 aaggtgcctgaactgccacaccccgaggtgccggaattgccgaagcctgaattgcctgag 348

                                           
Query: 497 caccctgctatgcccgagcccccgaagcctga 528
           ||||||||  |||| |||| ||||||||||||
Sbjct: 349 caccctgcggtgccggagctcccgaagcctga 380



 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 188 ccggagctgccaaagcccga 207
           ||||||||||||||||||||
Sbjct: 235 ccggagctgccaaagcccga 254



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>gb|AY112347.1| Zea mays CL32321_1 mRNA sequence
          Length = 636

 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 54/62 (87%)
 Strand = Plus / Minus

                                                                       
Query: 188 ccggagctgccaaagcccgaactcccgccgcaccccgtcatgcccgagctgccaaagcct 247
           ||||||||||| ||||||||||| || || ||||| ||| |||| ||||| |||||||||
Sbjct: 434 ccggagctgcccaagcccgaactgcctcctcacccggtcgtgccagagcttccaaagcct 375

             
Query: 248 ga 249
           ||
Sbjct: 374 ga 373



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 233 gagctgccaaagcctgaactacctc 257
           |||||||||||||||||||| ||||
Sbjct: 350 gagctgccaaagcctgaactccctc 326



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 467 ccggaggtgccaaagcatgagctgccgcc 495
           |||||||||||||| || |||||||||||
Sbjct: 287 ccggaggtgccaaaccacgagctgccgcc 259



 Score = 40.1 bits (20), Expect = 7.5
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 191 gagctgccaaagcccgaactcccgccgcaccc 222
           |||||||||||||| |||||||| || |||||
Sbjct: 350 gagctgccaaagcctgaactccctcctcaccc 319



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>ref|XM_479032.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 994

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 58/68 (85%)
 Strand = Plus / Plus

                                                                       
Query: 183 tcgtcccggagctgccaaagcccgaactcccgccgcaccccgtcatgcccgagctgccaa 242
           |||| ||||||||||| |||| |||    ||||||||||||||| |||| |||||||| |
Sbjct: 690 tcgtgccggagctgcccaagcacgaggagccgccgcaccccgtcgtgccggagctgccga 749

                   
Query: 243 agcctgaa 250
           ||||||||
Sbjct: 750 agcctgaa 757



 Score = 46.1 bits (23), Expect = 0.12
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 212 ccgccgcaccccgtcatgcccgagctgccaaagcc 246
           ||||| ||||||||| |||| ||||||||||||||
Sbjct: 554 ccgccacaccccgtcgtgccggagctgccaaagcc 588



 Score = 44.1 bits (22), Expect = 0.48
 Identities = 49/58 (84%)
 Strand = Plus / Plus

                                                                     
Query: 188 ccggagctgccaaagcccgaactcccgccgcaccccgtcatgcccgagctgccaaagc 245
           ||||||||||| |||| ||||   ||||||||||| ||| |||| |||||||| ||||
Sbjct: 653 ccggagctgcctaagcacgaagagccgccgcaccctgtcgtgccggagctgcccaagc 710



 Score = 44.1 bits (22), Expect = 0.48
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 98  ctgctgctctcatgcagctccatgagcagtgcagcacg 135
           ||||||||||| | ||||||||||||||| || |||||
Sbjct: 107 ctgctgctctcgtccagctccatgagcagcgcggcacg 144



 Score = 40.1 bits (20), Expect = 7.5
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 466 gccggaggtgccaaagcatgagctgccgccgcaccc 501
           ||||||| |||| |||||||||  ||||||||||||
Sbjct: 223 gccggagctgcccaagcatgaggagccgccgcaccc 258



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>ref|XM_507388.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1634_B10.113
           mRNA
          Length = 1071

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 58/68 (85%)
 Strand = Plus / Plus

                                                                       
Query: 183 tcgtcccggagctgccaaagcccgaactcccgccgcaccccgtcatgcccgagctgccaa 242
           |||| ||||||||||| |||| |||    ||||||||||||||| |||| |||||||| |
Sbjct: 689 tcgtgccggagctgcccaagcacgaggagccgccgcaccccgtcgtgccggagctgccga 748

                   
Query: 243 agcctgaa 250
           ||||||||
Sbjct: 749 agcctgaa 756



 Score = 46.1 bits (23), Expect = 0.12
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 212 ccgccgcaccccgtcatgcccgagctgccaaagcc 246
           ||||| ||||||||| |||| ||||||||||||||
Sbjct: 553 ccgccacaccccgtcgtgccggagctgccaaagcc 587



 Score = 44.1 bits (22), Expect = 0.48
 Identities = 49/58 (84%)
 Strand = Plus / Plus

                                                                     
Query: 188 ccggagctgccaaagcccgaactcccgccgcaccccgtcatgcccgagctgccaaagc 245
           ||||||||||| |||| ||||   ||||||||||| ||| |||| |||||||| ||||
Sbjct: 652 ccggagctgcctaagcacgaagagccgccgcaccctgtcgtgccggagctgcccaagc 709



 Score = 44.1 bits (22), Expect = 0.48
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 98  ctgctgctctcatgcagctccatgagcagtgcagcacg 135
           ||||||||||| | ||||||||||||||| || |||||
Sbjct: 106 ctgctgctctcgtccagctccatgagcagcgcggcacg 143



 Score = 40.1 bits (20), Expect = 7.5
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 466 gccggaggtgccaaagcatgagctgccgccgcaccc 501
           ||||||| |||| |||||||||  ||||||||||||
Sbjct: 222 gccggagctgcccaagcatgaggagccgccgcaccc 257



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>ref|XM_506448.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1634_B10.113
           mRNA
          Length = 1071

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 58/68 (85%)
 Strand = Plus / Plus

                                                                       
Query: 183 tcgtcccggagctgccaaagcccgaactcccgccgcaccccgtcatgcccgagctgccaa 242
           |||| ||||||||||| |||| |||    ||||||||||||||| |||| |||||||| |
Sbjct: 689 tcgtgccggagctgcccaagcacgaggagccgccgcaccccgtcgtgccggagctgccga 748

                   
Query: 243 agcctgaa 250
           ||||||||
Sbjct: 749 agcctgaa 756



 Score = 46.1 bits (23), Expect = 0.12
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 212 ccgccgcaccccgtcatgcccgagctgccaaagcc 246
           ||||| ||||||||| |||| ||||||||||||||
Sbjct: 553 ccgccacaccccgtcgtgccggagctgccaaagcc 587



 Score = 44.1 bits (22), Expect = 0.48
 Identities = 49/58 (84%)
 Strand = Plus / Plus

                                                                     
Query: 188 ccggagctgccaaagcccgaactcccgccgcaccccgtcatgcccgagctgccaaagc 245
           ||||||||||| |||| ||||   ||||||||||| ||| |||| |||||||| ||||
Sbjct: 652 ccggagctgcctaagcacgaagagccgccgcaccctgtcgtgccggagctgcccaagc 709



 Score = 44.1 bits (22), Expect = 0.48
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 98  ctgctgctctcatgcagctccatgagcagtgcagcacg 135
           ||||||||||| | ||||||||||||||| || |||||
Sbjct: 106 ctgctgctctcgtccagctccatgagcagcgcggcacg 143



 Score = 40.1 bits (20), Expect = 7.5
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 466 gccggaggtgccaaagcatgagctgccgccgcaccc 501
           ||||||| |||| |||||||||  ||||||||||||
Sbjct: 222 gccggagctgcccaagcatgaggagccgccgcaccc 257



to top

>dbj|AK106214.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-208-G11, full
           insert sequence
          Length = 1071

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 58/68 (85%)
 Strand = Plus / Plus

                                                                       
Query: 183 tcgtcccggagctgccaaagcccgaactcccgccgcaccccgtcatgcccgagctgccaa 242
           |||| ||||||||||| |||| |||    ||||||||||||||| |||| |||||||| |
Sbjct: 689 tcgtgccggagctgcccaagcacgaggagccgccgcaccccgtcgtgccggagctgccga 748

                   
Query: 243 agcctgaa 250
           ||||||||
Sbjct: 749 agcctgaa 756



 Score = 46.1 bits (23), Expect = 0.12
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 212 ccgccgcaccccgtcatgcccgagctgccaaagcc 246
           ||||| ||||||||| |||| ||||||||||||||
Sbjct: 553 ccgccacaccccgtcgtgccggagctgccaaagcc 587



 Score = 44.1 bits (22), Expect = 0.48
 Identities = 49/58 (84%)
 Strand = Plus / Plus

                                                                     
Query: 188 ccggagctgccaaagcccgaactcccgccgcaccccgtcatgcccgagctgccaaagc 245
           ||||||||||| |||| ||||   ||||||||||| ||| |||| |||||||| ||||
Sbjct: 652 ccggagctgcctaagcacgaagagccgccgcaccctgtcgtgccggagctgcccaagc 709



 Score = 44.1 bits (22), Expect = 0.48
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 98  ctgctgctctcatgcagctccatgagcagtgcagcacg 135
           ||||||||||| | ||||||||||||||| || |||||
Sbjct: 106 ctgctgctctcgtccagctccatgagcagcgcggcacg 143



 Score = 40.1 bits (20), Expect = 7.5
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 466 gccggaggtgccaaagcatgagctgccgccgcaccc 501
           ||||||| |||| |||||||||  ||||||||||||
Sbjct: 222 gccggagctgcccaagcatgaggagccgccgcaccc 257



to top

>dbj|AK105918.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-H12, full
           insert sequence
          Length = 1071

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 58/68 (85%)
 Strand = Plus / Plus

                                                                       
Query: 183 tcgtcccggagctgccaaagcccgaactcccgccgcaccccgtcatgcccgagctgccaa 242
           |||| ||||||||||| |||| |||    ||||||||||||||| |||| |||||||| |
Sbjct: 689 tcgtgccggagctgcccaagcacgaggagccgccgcaccccgtcgtgccggagctgccga 748

                   
Query: 243 agcctgaa 250
           ||||||||
Sbjct: 749 agcctgaa 756



 Score = 46.1 bits (23), Expect = 0.12
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 212 ccgccgcaccccgtcatgcccgagctgccaaagcc 246
           ||||| ||||||||| |||| ||||||||||||||
Sbjct: 553 ccgccacaccccgtcgtgccggagctgccaaagcc 587



 Score = 44.1 bits (22), Expect = 0.48
 Identities = 49/58 (84%)
 Strand = Plus / Plus

                                                                     
Query: 188 ccggagctgccaaagcccgaactcccgccgcaccccgtcatgcccgagctgccaaagc 245
           ||||||||||| |||| ||||   ||||||||||| ||| |||| |||||||| ||||
Sbjct: 652 ccggagctgcctaagcacgaagagccgccgcaccctgtcgtgccggagctgcccaagc 709



 Score = 44.1 bits (22), Expect = 0.48
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 98  ctgctgctctcatgcagctccatgagcagtgcagcacg 135
           ||||||||||| | ||||||||||||||| || |||||
Sbjct: 106 ctgctgctctcgtccagctccatgagcagcgcggcacg 143



 Score = 40.1 bits (20), Expect = 7.5
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 466 gccggaggtgccaaagcatgagctgccgccgcaccc 501
           ||||||| |||| |||||||||  ||||||||||||
Sbjct: 222 gccggagctgcccaagcatgaggagccgccgcaccc 257



to top

>dbj|AK070771.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023069L14, full
           insert sequence
          Length = 988

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 58/68 (85%)
 Strand = Plus / Plus

                                                                       
Query: 183 tcgtcccggagctgccaaagcccgaactcccgccgcaccccgtcatgcccgagctgccaa 242
           |||| ||||||||||| |||| |||    ||||||||||||||| |||| |||||||| |
Sbjct: 684 tcgtgccggagctgcccaagcacgaggagccgccgcaccccgtcgtgccggagctgccga 743

                   
Query: 243 agcctgaa 250
           ||||||||
Sbjct: 744 agcctgaa 751



 Score = 46.1 bits (23), Expect = 0.12
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 212 ccgccgcaccccgtcatgcccgagctgccaaagcc 246
           ||||| ||||||||| |||| ||||||||||||||
Sbjct: 549 ccgccacaccccgtcgtgccggagctgccaaagcc 583



 Score = 44.1 bits (22), Expect = 0.48
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 98  ctgctgctctcatgcagctccatgagcagtgcagcacg 135
           ||||||||||| | ||||||||||||||| || |||||
Sbjct: 107 ctgctgctctcgtccagctccatgagcagcgcggcacg 144



 Score = 40.1 bits (20), Expect = 7.5
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 466 gccggaggtgccaaagcatgagctgccgccgcaccc 501
           ||||||| |||| |||||||||  ||||||||||||
Sbjct: 223 gccggagctgcccaagcatgaggagccgccgcaccc 258



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>gb|AC144762.3| Mus musculus BAC clone RP24-95D6 from 3, complete sequence
          Length = 198005

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 96    ctctgctgctctcatgcagct 116
             |||||||||||||||||||||
Sbjct: 83764 ctctgctgctctcatgcagct 83744



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>gb|BC109470.1| Danio rerio cDNA clone IMAGE:7395403, containing frame-shift errors
          Length = 1595

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 48  acatcatgctgcgcaacaac 67
           ||||||||||||||||||||
Sbjct: 669 acatcatgctgcgcaacaac 688



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>ref|XM_479030.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 680

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 474 tgccaaagcatgagctgccgccgcaccc 501
           |||| |||| ||||||||||||||||||
Sbjct: 331 tgcccaagcctgagctgccgccgcaccc 358



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>gb|J00554.1|MUSIGKJC1 Mus musculus immunoglobulin kappa precursor gene, partial cds
          Length = 881

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 72  tggcctcctttgtcttcctc 91
           ||||||||||||||||||||
Sbjct: 317 tggcctcctttgtcttcctc 336



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>gb|AC156398.13| Mus musculus 6 BAC RP24-279F16 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 170925

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 72    tggcctcctttgtcttcctc 91
             ||||||||||||||||||||
Sbjct: 19123 tggcctcctttgtcttcctc 19142



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>gb|BC083410.1| Danio rerio zgc:103514, mRNA (cDNA clone MGC:103514 IMAGE:7239253),
           complete cds
          Length = 1656

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 48  acatcatgctgcgcaacaac 67
           ||||||||||||||||||||
Sbjct: 733 acatcatgctgcgcaacaac 752



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>gb|AF513926.1| Mus musculus strain C57BL/6 immunoglobulin kappa (Igk) gene, partial
             sequence
          Length = 18931

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 72    tggcctcctttgtcttcctc 91
             ||||||||||||||||||||
Sbjct: 14953 tggcctcctttgtcttcctc 14972



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>emb|AJ621385.1| Gallus gallus RAD50 gene (partial), IL5 gene, IRF1 gene, OCTN2 gene and
             OCTN1 gene (partial)
          Length = 113629

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 99    tgctgctctcatgcagctcc 118
             ||||||||||||||||||||
Sbjct: 44065 tgctgctctcatgcagctcc 44046



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>gb|AC105217.4| Homo sapiens chromosome , clone RP11-384E22, complete sequence
          Length = 158653

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 36     acataaacaagaacatcatg 55
              ||||||||||||||||||||
Sbjct: 134111 acataaacaagaacatcatg 134130



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>gb|AE012395.1| Xanthomonas campestris pv. campestris str. ATCC 33913,  section 303
            of 460 of the complete genome
          Length = 10965

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 57   tgcgcaacaacgccatggcc 76
            ||||||||||||||||||||
Sbjct: 4783 tgcgcaacaacgccatggcc 4802



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>dbj|AK036494.1| Mus musculus adult male bone cDNA, RIKEN full-length enriched
           library, clone:9830118L20 product:unclassifiable, full
           insert sequence
          Length = 3083

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 72  tggcctcctttgtcttcctc 91
           ||||||||||||||||||||
Sbjct: 136 tggcctcctttgtcttcctc 155



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>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome
          Length = 5148708

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 57      tgcgcaacaacgccatggcc 76
               ||||||||||||||||||||
Sbjct: 1572156 tgcgcaacaacgccatggcc 1572137



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>ref|NM_001006014.1| Danio rerio zgc:103514 (zgc:103514), mRNA
          Length = 1656

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 48  acatcatgctgcgcaacaac 67
           ||||||||||||||||||||
Sbjct: 733 acatcatgctgcgcaacaac 752



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>dbj|BA000039.2| Thermosynechococcus elongatus BP-1 DNA, complete genome
          Length = 2593857

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 465    cgccggaggtgccaaagcatgagc 488
              |||||||||||||| |||||||||
Sbjct: 181064 cgccggaggtgccagagcatgagc 181087



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>gb|AC153612.6| Mus musculus 6 BAC RP23-435I4 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 197401

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 72     tggcctcctttgtcttcctc 91
              ||||||||||||||||||||
Sbjct: 135909 tggcctcctttgtcttcctc 135928



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>dbj|AK107490.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-129-D01, full
           insert sequence
          Length = 680

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 474 tgccaaagcatgagctgccgccgcaccc 501
           |||| |||| ||||||||||||||||||
Sbjct: 331 tgcccaagcctgagctgccgccgcaccc 358



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>gb|AC124409.5| Mus musculus BAC clone RP24-262P14 from 8, complete sequence
          Length = 178779

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 86    ttcctcgtggctctgctgct 105
             ||||||||||||||||||||
Sbjct: 23514 ttcctcgtggctctgctgct 23533



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>gb|AC159985.2| Gallus gallus BAC clone CH261-18F10 from chromosome unknown, complete
              sequence
          Length = 211288

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 99     tgctgctctcatgcagctcc 118
              ||||||||||||||||||||
Sbjct: 177030 tgctgctctcatgcagctcc 177011



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>emb|AL713991.13| Mouse DNA sequence from clone RP23-132C16 on chromosome 1, complete
             sequence
          Length = 210040

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 119   atgagcagtgcagcacgaca 138
             ||||||||||||||||||||
Sbjct: 47706 atgagcagtgcagcacgaca 47687



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>gb|M34473.1|MUSIGKABM Mouse Ig processed pseudo-kappa-chain mRNA J-C-region
          Length = 798

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 72  tggcctcctttgtcttcctc 91
           ||||||||||||||||||||
Sbjct: 304 tggcctcctttgtcttcctc 323


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,763,491
Number of Sequences: 3902068
Number of extensions: 3763491
Number of successful extensions: 75080
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 74605
Number of HSP's gapped (non-prelim): 463
length of query: 551
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 528
effective length of database: 17,143,297,704
effective search space: 9051661187712
effective search space used: 9051661187712
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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