ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart44c12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_471066.1| Oryza sativa (japonica cultivar-group), predic... 42 0.29
2ref|XM_682086.1| PREDICTED: Danio rerio similar to kinesin-relat... 42 0.29
3ref|XM_689984.1| PREDICTED: Danio rerio similar to kinesin-relat... 42 0.29
4dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 42 0.29
5emb|BX649390.12| Zebrafish DNA sequence from clone DKEY-261L2 in... 42 0.29
6dbj|AK069299.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 0.29
7emb|AL606450.3|OSJN00001 Oryza sativa genomic DNA, chromosome 4,... 42 0.29
8ref|NM_192650.1| Oryza sativa (japonica cultivar-group), predic... 40 1.1
9gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome 40 1.1
10emb|BX842581.1| Mycobacterium tuberculosis H37Rv complete genome... 40 1.1
11emb|BX248344.1| Mycobacterium bovis subsp. bovis AF2122/97 compl... 40 1.1
12dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 1.1
13dbj|AP003330.4| Oryza sativa (japonica cultivar-group) genomic D... 40 1.1
14dbj|AP003278.5| Oryza sativa (japonica cultivar-group) genomic D... 40 1.1
15ref|XM_465123.1| Oryza sativa (japonica cultivar-group), mRNA 38 4.5
16ref|NM_196582.1| Oryza sativa (japonica cultivar-group) hypothet... 38 4.5
17gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence 38 4.5
18ref|NM_190283.1| Oryza sativa (japonica cultivar-group), predic... 38 4.5
19ref|XM_475062.1| Oryza sativa (japonica cultivar-group), predic... 38 4.5
20ref|XM_472922.1| Oryza sativa (japonica cultivar-group), predic... 38 4.5
21gb|AY581127.1| Azorhizobium caulinodans strain ORS571 hydrogenas... 38 4.5
22ref|XM_960512.1| Neurospora crassa OR74A hypothetical protein (N... 38 4.5
23ref|XM_330110.1| Neurospora crassa OR74A hypothetical protein (N... 38 4.5
24gb|AC134925.4| Oryza sativa (japonica cultivar-group) chromosome... 38 4.5
25gb|AC122411.4| Mus musculus BAC clone RP24-143P19 from chromosom... 38 4.5
26gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome 38 4.5
27ref|XM_793472.1| PREDICTED: Strongylocentrotus purpuratus simila... 38 4.5
28emb|AL118506.27|HSJ591C20 Human DNA sequence from clone RP4-591C... 38 4.5
29emb|AL008718.23|HS268H5 Human DNA sequence from clone CTA-268H5 ... 38 4.5
30emb|AL606614.3|OSJN00047 Oryza sativa genomic DNA, chromosome 4,... 38 4.5
31dbj|AK095860.1| Homo sapiens cDNA FLJ38541 fis, clone HCHON20015... 38 4.5
32gb|AC073392.3| Oryza sativa (japonica cultivar-group) chromosome... 38 4.5
33dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 38 4.5
34dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 38 4.5
35dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 38 4.5
36dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 38 4.5
37dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 38 4.5
38dbj|AB081498.2| Mus musculus ELYS gene for putative transcriptio... 38 4.5
39gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome 38 4.5
40gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 38 4.5
41dbj|AP003349.4| Oryza sativa (japonica cultivar-group) genomic D... 38 4.5
42dbj|AP003418.2| Oryza sativa (japonica cultivar-group) genomic D... 38 4.5
43dbj|AP005966.3| Oryza sativa (japonica cultivar-group) genomic D... 38 4.5
44dbj|AP005532.3| Oryza sativa (japonica cultivar-group) genomic D... 38 4.5
45dbj|AP005310.3| Oryza sativa (japonica cultivar-group) genomic D... 38 4.5
46dbj|AK105679.1| Oryza sativa (japonica cultivar-group) cDNA clon... 38 4.5
47dbj|AK103271.1| Oryza sativa (japonica cultivar-group) cDNA clon... 38 4.5
48dbj|AK064143.1| Oryza sativa (japonica cultivar-group) cDNA clon... 38 4.5
49emb|AL442104.2| Oryza sativa genomic DNA, chromosome 4, BAC clon... 38 4.5
50gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, com... 38 4.5
51gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 38 4.5
52gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 38 4.5
53gb|AC084818.3| Oryza sativa (japonica cultivar-group) chromosome... 38 4.5 
>ref|XM_471066.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1278

 Score = 42.1 bits (21), Expect = 0.29
 Identities = 39/45 (86%)
 Strand = Plus / Plus

                                                        
Query: 57  gcccgcgcgccgcctcggctccgtcctcgacgtctcctccgacgt 101
           |||||||| ||||||| || |||  |||| |||||||||||||||
Sbjct: 126 gcccgcgccccgcctccgcaccgcgctcgccgtctcctccgacgt 170
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>ref|XM_682086.1| PREDICTED: Danio rerio similar to kinesin-related microtuble-based
            motor protein (LOC558819), mRNA
          Length = 2535

 Score = 42.1 bits (21), Expect = 0.29
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 40   cgcccgctccaccgcaggccc 60
            |||||||||||||||||||||
Sbjct: 1170 cgcccgctccaccgcaggccc 1190
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>ref|XM_689984.1| PREDICTED: Danio rerio similar to kinesin-related microtuble-based
            motor protein (LOC566700), mRNA
          Length = 2811

 Score = 42.1 bits (21), Expect = 0.29
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 40   cgcccgctccaccgcaggccc 60
            |||||||||||||||||||||
Sbjct: 1170 cgcccgctccaccgcaggccc 1190
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
               sequence
          Length = 35498469

 Score = 42.1 bits (21), Expect = 0.29
 Identities = 39/45 (86%)
 Strand = Plus / Plus

                                                            
Query: 57      gcccgcgcgccgcctcggctccgtcctcgacgtctcctccgacgt 101
               |||||||| ||||||| || |||  |||| |||||||||||||||
Sbjct: 1123363 gcccgcgccccgcctccgcaccgcgctcgccgtctcctccgacgt 1123407



 Score = 38.2 bits (19), Expect = 4.5
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                       
Query: 78       cgtcctcgacgtctcctccgacg 100
                |||||||| ||||||||||||||
Sbjct: 24091654 cgtcctcggcgtctcctccgacg 24091676
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>emb|BX649390.12| Zebrafish DNA sequence from clone DKEY-261L2 in linkage group 2, complete
              sequence
          Length = 184594

 Score = 42.1 bits (21), Expect = 0.29
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 40     cgcccgctccaccgcaggccc 60
              |||||||||||||||||||||
Sbjct: 155842 cgcccgctccaccgcaggccc 155822
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>dbj|AK069299.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023012M21, full
           insert sequence
          Length = 1736

 Score = 42.1 bits (21), Expect = 0.29
 Identities = 39/45 (86%)
 Strand = Plus / Plus

                                                        
Query: 57  gcccgcgcgccgcctcggctccgtcctcgacgtctcctccgacgt 101
           |||||||| ||||||| || |||  |||| |||||||||||||||
Sbjct: 266 gcccgcgccccgcctccgcaccgcgctcgccgtctcctccgacgt 310
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>emb|AL606450.3|OSJN00001 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0020P07,
             complete sequence
          Length = 167895

 Score = 42.1 bits (21), Expect = 0.29
 Identities = 39/45 (86%)
 Strand = Plus / Plus

                                                          
Query: 57    gcccgcgcgccgcctcggctccgtcctcgacgtctcctccgacgt 101
             |||||||| ||||||| || |||  |||| |||||||||||||||
Sbjct: 65745 gcccgcgccccgcctccgcaccgcgctcgccgtctcctccgacgt 65789
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>ref|NM_192650.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1434

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 60  cgcgcgccgcctcggctccg 79
           ||||||||||||||||||||
Sbjct: 553 cgcgcgccgcctcggctccg 534
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>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome
          Length = 4403837

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 30/32 (93%), Gaps = 1/32 (3%)
 Strand = Plus / Plus

                                               
Query: 36      cgtgcgcccgctccaccgcaggcccgcgcgcc 67
               |||||||| ||||| |||||||||||||||||
Sbjct: 3381933 cgtgcgccggctcc-ccgcaggcccgcgcgcc 3381963
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>emb|BX842581.1| Mycobacterium tuberculosis H37Rv complete genome; segment 10/13
          Length = 348676

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 30/32 (93%), Gaps = 1/32 (3%)
 Strand = Plus / Plus

                                              
Query: 36     cgtgcgcccgctccaccgcaggcccgcgcgcc 67
              |||||||| ||||| |||||||||||||||||
Sbjct: 267159 cgtgcgccggctcc-ccgcaggcccgcgcgcc 267189
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>emb|BX248344.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 11/14
          Length = 318050

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 30/32 (93%), Gaps = 1/32 (3%)
 Strand = Plus / Plus

                                              
Query: 36     cgtgcgcccgctccaccgcaggcccgcgcgcc 67
              |||||||| ||||| |||||||||||||||||
Sbjct: 217756 cgtgcgccggctcc-ccgcaggcccgcgcgcc 217786
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 60       cgcgcgccgcctcggctccg 79
                ||||||||||||||||||||
Sbjct: 23685281 cgcgcgccgcctcggctccg 23685300



 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 61       gcgcgccgcctcggctccg 79
                |||||||||||||||||||
Sbjct: 39035143 gcgcgccgcctcggctccg 39035161
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>dbj|AP003330.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1085F01
          Length = 163671

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 60    cgcgcgccgcctcggctccg 79
             ||||||||||||||||||||
Sbjct: 62985 cgcgcgccgcctcggctccg 63004
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>dbj|AP003278.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0518F01
          Length = 154541

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 60     cgcgcgccgcctcggctccg 79
              ||||||||||||||||||||
Sbjct: 147980 cgcgcgccgcctcggctccg 147999
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>ref|XM_465123.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 684

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 59  ccgcgcgccgcctcggctc 77
           |||||||||||||||||||
Sbjct: 407 ccgcgcgccgcctcggctc 389
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>ref|NM_196582.1| Oryza sativa (japonica cultivar-group) hypothetical protein
           (OSJNBa0072A12.22), mRNA
          Length = 372

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 78  cgtcctcgacgtctcctccgacg 100
           |||||||| ||||||||||||||
Sbjct: 181 cgtcctcggcgtctcctccgacg 203
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>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence
          Length = 3587082

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 58      cccgcgcgccgcctcggct 76
               |||||||||||||||||||
Sbjct: 2866826 cccgcgcgccgcctcggct 2866844
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>ref|NM_190283.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 729

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 61  gcgcgccgcctcggctccg 79
           |||||||||||||||||||
Sbjct: 398 gcgcgccgcctcggctccg 380
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>ref|XM_475062.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2811

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 64  cgccgcctcggctccgtcc 82
           |||||||||||||||||||
Sbjct: 325 cgccgcctcggctccgtcc 343
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>ref|XM_472922.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1068

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 78  cgtcctcgacgtctcctccgacg 100
           |||||||| ||||||||||||||
Sbjct: 180 cgtcctcggcgtctcctccgacg 202
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>gb|AY581127.1| Azorhizobium caulinodans strain ORS571 hydrogenase gene cluster,
             complete sequence
          Length = 21000

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 67    cgcctcggctccgtcctcg 85
             |||||||||||||||||||
Sbjct: 13663 cgcctcggctccgtcctcg 13645
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>ref|XM_960512.1| Neurospora crassa OR74A hypothetical protein (NCU02923.1) partial
           mRNA
          Length = 765

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 71  tcggctccgtcctcgacgtctcc 93
           |||||||||||| ||||||||||
Sbjct: 104 tcggctccgtccgcgacgtctcc 126
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>ref|XM_330110.1| Neurospora crassa OR74A hypothetical protein (NCU02923.1) partial
           mRNA
          Length = 765

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 71  tcggctccgtcctcgacgtctcc 93
           |||||||||||| ||||||||||
Sbjct: 104 tcggctccgtccgcgacgtctcc 126
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>gb|AC134925.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0041J17, complete sequence
          Length = 148829

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 66    ccgcctcggctccgtcctcgacg 88
             |||||||||||||| ||||||||
Sbjct: 69019 ccgcctcggctccggcctcgacg 69041
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>gb|AC122411.4| Mus musculus BAC clone RP24-143P19 from chromosome 1, complete sequence
          Length = 182658

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 50     accgcaggcccgcgcgccg 68
              |||||||||||||||||||
Sbjct: 123086 accgcaggcccgcgcgccg 123068
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>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome
          Length = 4406967

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                      
Query: 59      ccgcgcgccgcctcggctccgtc 81
               ||||||||||||||||| |||||
Sbjct: 1386887 ccgcgcgccgcctcggcgccgtc 1386909
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>ref|XM_793472.1| PREDICTED: Strongylocentrotus purpuratus similar to Fibrillin-2
            precursor (LOC594019), mRNA
          Length = 1986

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                       
Query: 76   tccgtcctcgacgtctcctccgacgtc 102
            |||||| ||||| ||||||||||||||
Sbjct: 1187 tccgtcgtcgacatctcctccgacgtc 1161
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>emb|AL118506.27|HSJ591C20 Human DNA sequence from clone RP4-591C20 on chromosome 20 Contains the
              C20orf135 gene for chromosome 20 open reading frame 135,
              the TPD52L2 gene for tumor protein D52-like protein 2, the
              DNAJC5 gene for member 5 of DnaJ (Hsp40) homolog subfamily
              C, the URKL1 gene for uridine kinase-like 1, the gene for a
              novel protein (KIAA1196), the C20orf136 gene for chromosome
              20 open reading frame 136, the 5' end of the C20orf14 gene
              for chromosome 20 open reading frame 14 and twelve CpG
              islands, complete sequence
          Length = 139505

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 52     cgcaggcccgcgcgccgcc 70
              |||||||||||||||||||
Sbjct: 120642 cgcaggcccgcgcgccgcc 120624
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>emb|AL008718.23|HS268H5 Human DNA sequence from clone CTA-268H5 on chromosome 22q13.2-13.3,
            complete sequence
          Length = 188833

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 41   gcccgctccaccgcaggcc 59
            |||||||||||||||||||
Sbjct: 5607 gcccgctccaccgcaggcc 5589
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>emb|AL606614.3|OSJN00047 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0011N17,
             complete sequence
          Length = 129498

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 78    cgtcctcgacgtctcctccgacg 100
             |||||||| ||||||||||||||
Sbjct: 88633 cgtcctcggcgtctcctccgacg 88655
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>dbj|AK095860.1| Homo sapiens cDNA FLJ38541 fis, clone HCHON2001523, highly similar to
            Homo sapiens nuclear pore-associated protein (NPAP60L)
            mRNA
          Length = 3505

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 41   gcccgctccaccgcaggcc 59
            |||||||||||||||||||
Sbjct: 1830 gcccgctccaccgcaggcc 1812
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>gb|AC073392.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0072A12,
              complete sequence
          Length = 149347

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 78     cgtcctcgacgtctcctccgacg 100
              |||||||| ||||||||||||||
Sbjct: 101029 cgtcctcggcgtctcctccgacg 101007
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                       
Query: 66       ccgcctcggctccgtcctcgacg 88
                |||||||||||||| ||||||||
Sbjct: 18965821 ccgcctcggctccggcctcgacg 18965843
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                       
Query: 78       cgtcctcgacgtctcctccgacg 100
                |||||||| ||||||||||||||
Sbjct: 14628567 cgtcctcggcgtctcctccgacg 14628545
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                       
Query: 33       ctccgtgcgcccgctccaccgca 55
                ||||||||||||| |||||||||
Sbjct: 22676599 ctccgtgcgcccggtccaccgca 22676621
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5,
              complete sequence
          Length = 29737217

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 64     cgccgcctcggctccgtcc 82
              |||||||||||||||||||
Sbjct: 188093 cgccgcctcggctccgtcc 188111
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 59       ccgcgcgccgcctcggctc 77
                |||||||||||||||||||
Sbjct: 11714999 ccgcgcgccgcctcggctc 11714981
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>dbj|AB081498.2| Mus musculus ELYS gene for putative transcription factor, complete
            cds
          Length = 56680

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 50   accgcaggcccgcgcgccg 68
            |||||||||||||||||||
Sbjct: 8176 accgcaggcccgcgcgccg 8194
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>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome
          Length = 3052398

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                      
Query: 1       gccgccgacaggctccccgcgcc 23
               ||||||||||||| |||||||||
Sbjct: 2824388 gccgccgacaggcaccccgcgcc 2824410
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 57     gcccgcgcgccgcctcggc 75
              |||||||||||||||||||
Sbjct: 205708 gcccgcgcgccgcctcggc 205690
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>dbj|AP003349.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0674H09
          Length = 142955

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 61     gcgcgccgcctcggctccg 79
              |||||||||||||||||||
Sbjct: 108776 gcgcgccgcctcggctccg 108794
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>dbj|AP003418.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0506A10
          Length = 145265

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 61    gcgcgccgcctcggctccg 79
             |||||||||||||||||||
Sbjct: 53123 gcgcgccgcctcggctccg 53141
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>dbj|AP005966.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:B1047H05
          Length = 187273

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 33     ctccgtgcgcccgctccaccgca 55
              ||||||||||||| |||||||||
Sbjct: 142008 ctccgtgcgcccggtccaccgca 142030
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>dbj|AP005532.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBa0010K08
          Length = 184760

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 59     ccgcgcgccgcctcggctc 77
              |||||||||||||||||||
Sbjct: 161288 ccgcgcgccgcctcggctc 161270
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>dbj|AP005310.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0477B05
          Length = 142166

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 59    ccgcgcgccgcctcggctc 77
             |||||||||||||||||||
Sbjct: 22889 ccgcgcgccgcctcggctc 22871
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>dbj|AK105679.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-201-B03, full
           insert sequence
          Length = 3336

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 64  cgccgcctcggctccgtcc 82
           |||||||||||||||||||
Sbjct: 438 cgccgcctcggctccgtcc 456
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>dbj|AK103271.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033124H21, full
           insert sequence
          Length = 3259

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 64  cgccgcctcggctccgtcc 82
           |||||||||||||||||||
Sbjct: 378 cgccgcctcggctccgtcc 396
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>dbj|AK064143.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-103-B11, full
           insert sequence
          Length = 1555

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 78  cgtcctcgacgtctcctccgacg 100
           |||||||| ||||||||||||||
Sbjct: 332 cgtcctcggcgtctcctccgacg 354
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>emb|AL442104.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0510A06, complete
             sequence
          Length = 90767

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 78    cgtcctcgacgtctcctccgacg 100
             |||||||| ||||||||||||||
Sbjct: 84900 cgtcctcggcgtctcctccgacg 84922
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>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence
          Length = 3809201

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 51      ccgcaggcccgcgcgccgc 69
               |||||||||||||||||||
Sbjct: 1124603 ccgcaggcccgcgcgccgc 1124621
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                       
Query: 78       cgtcctcgacgtctcctccgacg 100
                |||||||| ||||||||||||||
Sbjct: 14636808 cgtcctcggcgtctcctccgacg 14636786
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                       
Query: 66       ccgcctcggctccgtcctcgacg 88
                |||||||||||||| ||||||||
Sbjct: 19124470 ccgcctcggctccggcctcgacg 19124492
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>gb|AC084818.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0668H12,
             complete sequence
          Length = 160603

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 64    cgccgcctcggctccgtcc 82
             |||||||||||||||||||
Sbjct: 70277 cgccgcctcggctccgtcc 70295


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 479,266
Number of Sequences: 3902068
Number of extensions: 479266
Number of successful extensions: 44284
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 42516
Number of HSP's gapped (non-prelim): 1772
length of query: 102
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 81
effective length of database: 17,151,101,840
effective search space: 1389239249040
effective search space used: 1389239249040
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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