ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart44c04 |
|---|---|
| Clone Library Name | barley_pub |
>HPAB3_PSESM (Q2QCI9) Effector protein hopAB3 (Avirulence protein avrPtoB)| [Includes: E3 ubiquitin-protein ligase (EC 6.3.2.-)] Length = 579 Score = 33.5 bits (75), Expect = 0.39 Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 2/47 (4%) Frame = +2 Query: 206 EVAAPQT-APPRHLPSADPASPSARCSGGSPPSLISHLAAR-SGSMP 340 E AAPQ A RH P AD A+ R GG P ++ + R +G++P Sbjct: 95 EAAAPQARAEERHTPEADAAASHVRTEGGRTPQALAGTSPRHTGAVP 141
>ODP2_RAT (P08461) Dihydrolipoyllysine-residue acetyltransferase component of| pyruvate dehydrogenase complex (EC 2.3.1.12) (E2) (Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex) (PDC-E2) (70 kDa mitochondrial autoantigen of Length = 555 Score = 32.3 bits (72), Expect = 0.87 Identities = 23/58 (39%), Positives = 30/58 (51%), Gaps = 2/58 (3%) Frame = +2 Query: 212 AAPQTAP-PRHLPSADPASPSARCSGGS-PPSLISHLAARSGSMPLRTACLWWIRIAE 379 AA Q AP P P+A PA+PSA G S P + L A S +M + T W ++ E Sbjct: 100 AATQAAPAPAAAPAAAPAAPSASAPGSSYPVHMQIVLPALSPTMTMGTVQRWEKKVGE 157
>P85B_MOUSE (O08908) Phosphatidylinositol 3-kinase regulatory beta subunit| (PI3-kinase p85-beta subunit) (PtdIns-3-kinase p85-beta) Length = 722 Score = 32.3 bits (72), Expect = 0.87 Identities = 16/31 (51%), Positives = 20/31 (64%) Frame = +2 Query: 212 AAPQTAPPRHLPSADPASPSARCSGGSPPSL 304 AAP PP+ PS +P+A +GGSPPSL Sbjct: 291 AAPPALPPK--PSKAKPAPTALANGGSPPSL 319
>SAM68_CHICK (Q8UUW7) KH domain-containing, RNA-binding, signal| transduction-associated protein 1 (Src-associated in mitosis 68 kDa protein) (Sam68) Length = 433 Score = 31.6 bits (70), Expect = 1.5 Identities = 18/37 (48%), Positives = 20/37 (54%), Gaps = 4/37 (10%) Frame = -1 Query: 260 PDRRREGGAGEQSGARQPQP*LTG----RSGGADGRA 162 P R GG G +GA+ PQP LTG S GA G A Sbjct: 28 PRRSPRGGGGRGAGAQHPQPLLTGGAAAGSSGAQGPA 64
>PCQAP_MOUSE (Q924H2) Positive cofactor 2 glutamine/Q-rich-associated protein| (PC2 glutamine/Q-rich-associated protein) (mPcqap) Length = 792 Score = 31.2 bits (69), Expect = 1.9 Identities = 20/49 (40%), Positives = 25/49 (51%), Gaps = 1/49 (2%) Frame = +2 Query: 185 SSLSARVEVAAPQTAPPRHLPSADPAS-PSARCSGGSPPSLISHLAARS 328 SS S +V PQ+ PP PS P S P++ S G PS S L + S Sbjct: 438 SSPSPGQQVQTPQSMPPPPQPSPQPGSQPNSNVSSGPAPSPSSFLPSPS 486
>LORI_HUMAN (P23490) Loricrin| Length = 316 Score = 31.2 bits (69), Expect = 1.9 Identities = 21/67 (31%), Positives = 27/67 (40%), Gaps = 8/67 (11%) Frame = -2 Query: 340 GHGAGPGCKMRNEGGRRS--------TRAPC*RRSRIGGGKVARGSSLGRGNLNPS*QGG 185 G G G GC + GG S T+ C + GGG G S G G + GG Sbjct: 193 GSGGGSGCGGGSSGGSGSGYVSSQQVTQTSCAPQPSYGGGSSGGGGSGGSGCFSSGGGGG 252 Query: 184 AAALMGG 164 ++ GG Sbjct: 253 SSGCGGG 259
>PRP_PIG (Q95JC9) Basic proline-rich protein precursor [Contains:| Proline-rich peptide SP-A (PRP-SP-A); Proline-rich peptide SP-B (PRP-SP-B); Parotid hormone (PH-Ab)] Length = 676 Score = 26.9 bits (58), Expect(2) = 2.0 Identities = 13/27 (48%), Positives = 13/27 (48%) Frame = +2 Query: 218 PQTAPPRHLPSADPASPSARCSGGSPP 298 P PP PS PA P AR G PP Sbjct: 444 PAGPPPPGPPSPGPAPPGARPPPGPPP 470 Score = 25.0 bits (53), Expect(2) = 7.0 Identities = 12/27 (44%), Positives = 12/27 (44%) Frame = +2 Query: 218 PQTAPPRHLPSADPASPSARCSGGSPP 298 P PP P PA P AR G PP Sbjct: 633 PPGPPPPGPPPPGPAPPGARPPPGPPP 659 Score = 25.0 bits (53), Expect(2) = 7.0 Identities = 12/27 (44%), Positives = 12/27 (44%) Frame = +2 Query: 218 PQTAPPRHLPSADPASPSARCSGGSPP 298 P PP P PA P AR G PP Sbjct: 612 PPGPPPPGPPPPGPAPPGARPPPGPPP 638 Score = 25.0 bits (53), Expect(2) = 7.0 Identities = 12/27 (44%), Positives = 12/27 (44%) Frame = +2 Query: 218 PQTAPPRHLPSADPASPSARCSGGSPP 298 P PP P PA P AR G PP Sbjct: 591 PPGPPPPGPPPPGPAPPGARPPPGPPP 617 Score = 25.0 bits (53), Expect(2) = 7.0 Identities = 12/27 (44%), Positives = 12/27 (44%) Frame = +2 Query: 218 PQTAPPRHLPSADPASPSARCSGGSPP 298 P PP P PA P AR G PP Sbjct: 570 PPGPPPPGPPPPGPAPPGARPPPGPPP 596 Score = 25.0 bits (53), Expect(2) = 7.0 Identities = 12/27 (44%), Positives = 12/27 (44%) Frame = +2 Query: 218 PQTAPPRHLPSADPASPSARCSGGSPP 298 P PP P PA P AR G PP Sbjct: 549 PPGPPPPGPPPPGPAPPGARPPPGPPP 575 Score = 25.0 bits (53), Expect(2) = 7.0 Identities = 12/27 (44%), Positives = 12/27 (44%) Frame = +2 Query: 218 PQTAPPRHLPSADPASPSARCSGGSPP 298 P PP P PA P AR G PP Sbjct: 528 PPGPPPPGPPPPGPAPPGARPPPGPPP 554 Score = 25.0 bits (53), Expect(2) = 5.5 Identities = 12/27 (44%), Positives = 12/27 (44%) Frame = +2 Query: 218 PQTAPPRHLPSADPASPSARCSGGSPP 298 P PP P PA P AR G PP Sbjct: 486 PPGPPPPGPPPPGPAPPGARPPPGPPP 512 Score = 25.0 bits (53), Expect(2) = 7.0 Identities = 12/27 (44%), Positives = 12/27 (44%) Frame = +2 Query: 218 PQTAPPRHLPSADPASPSARCSGGSPP 298 P PP P PA P AR G PP Sbjct: 374 PPGPPPPGPPPPGPAPPGARPPPGPPP 400 Score = 25.0 bits (53), Expect(2) = 7.0 Identities = 12/27 (44%), Positives = 12/27 (44%) Frame = +2 Query: 218 PQTAPPRHLPSADPASPSARCSGGSPP 298 P PP P PA P AR G PP Sbjct: 353 PPGPPPPGPPPPGPAPPGARPPPGPPP 379 Score = 25.0 bits (53), Expect(2) = 7.0 Identities = 12/27 (44%), Positives = 12/27 (44%) Frame = +2 Query: 218 PQTAPPRHLPSADPASPSARCSGGSPP 298 P PP P PA P AR G PP Sbjct: 332 PPGPPPPGPPPPGPAPPGARPPPGPPP 358 Score = 25.0 bits (53), Expect(2) = 7.0 Identities = 12/27 (44%), Positives = 12/27 (44%) Frame = +2 Query: 218 PQTAPPRHLPSADPASPSARCSGGSPP 298 P PP P PA P AR G PP Sbjct: 311 PPGPPPPGPPPPGPAPPGARPPPGPPP 337 Score = 25.0 bits (53), Expect(2) = 7.0 Identities = 12/27 (44%), Positives = 12/27 (44%) Frame = +2 Query: 218 PQTAPPRHLPSADPASPSARCSGGSPP 298 P PP P PA P AR G PP Sbjct: 290 PPGPPPPGPPPPGPAPPGARPPPGPPP 316 Score = 25.0 bits (53), Expect(2) = 7.0 Identities = 12/27 (44%), Positives = 12/27 (44%) Frame = +2 Query: 218 PQTAPPRHLPSADPASPSARCSGGSPP 298 P PP P PA P AR G PP Sbjct: 269 PPGPPPPGPPPPGPAPPGARPPPGPPP 295 Score = 25.0 bits (53), Expect(2) = 7.0 Identities = 12/27 (44%), Positives = 12/27 (44%) Frame = +2 Query: 218 PQTAPPRHLPSADPASPSARCSGGSPP 298 P PP P PA P AR G PP Sbjct: 248 PPGPPPLGPPPPGPAPPGARPPPGPPP 274 Score = 25.0 bits (53), Expect(2) = 7.0 Identities = 12/27 (44%), Positives = 12/27 (44%) Frame = +2 Query: 218 PQTAPPRHLPSADPASPSARCSGGSPP 298 P PP P PA P AR G PP Sbjct: 227 PPGPPPPGPPPPGPAPPGARPPPGPPP 253 Score = 25.0 bits (53), Expect(2) = 7.0 Identities = 12/27 (44%), Positives = 12/27 (44%) Frame = +2 Query: 218 PQTAPPRHLPSADPASPSARCSGGSPP 298 P PP P PA P AR G PP Sbjct: 206 PPGPPPPGPPPPGPAPPGARPPPGPPP 232 Score = 25.0 bits (53), Expect(2) = 7.0 Identities = 12/27 (44%), Positives = 12/27 (44%) Frame = +2 Query: 218 PQTAPPRHLPSADPASPSARCSGGSPP 298 P PP P PA P AR G PP Sbjct: 185 PPGPPPPGPPPPGPAPPGARPPPGPPP 211 Score = 25.0 bits (53), Expect(2) = 7.0 Identities = 12/27 (44%), Positives = 12/27 (44%) Frame = +2 Query: 218 PQTAPPRHLPSADPASPSARCSGGSPP 298 P PP P PA P AR G PP Sbjct: 143 PPGPPPPGPPPPGPAPPGARPPPGPPP 169 Score = 25.0 bits (53), Expect(2) = 7.0 Identities = 12/27 (44%), Positives = 12/27 (44%) Frame = +2 Query: 218 PQTAPPRHLPSADPASPSARCSGGSPP 298 P PP P PA P AR G PP Sbjct: 122 PPGPPPPGPPPPGPAPPGARPPPGPPP 148 Score = 25.0 bits (53), Expect(2) = 7.0 Identities = 12/27 (44%), Positives = 12/27 (44%) Frame = +2 Query: 218 PQTAPPRHLPSADPASPSARCSGGSPP 298 P PP P PA P AR G PP Sbjct: 101 PPGPPPPGPPPPGPAPPGARPPPGPPP 127 Score = 23.1 bits (48), Expect(2) = 5.5 Identities = 10/20 (50%), Positives = 10/20 (50%) Frame = +1 Query: 79 PPTAPPPTGRTLLRAAPPVA 138 PP PPP G APP A Sbjct: 443 PPAGPPPPGPPSPGPAPPGA 462 Score = 22.7 bits (47), Expect(2) = 7.0 Identities = 10/21 (47%), Positives = 11/21 (52%) Frame = +1 Query: 76 QPPTAPPPTGRTLLRAAPPVA 138 +PP PPP G APP A Sbjct: 610 RPPPGPPPPGPPPPGPAPPGA 630 Score = 22.7 bits (47), Expect(2) = 7.0 Identities = 10/21 (47%), Positives = 11/21 (52%) Frame = +1 Query: 76 QPPTAPPPTGRTLLRAAPPVA 138 +PP PPP G APP A Sbjct: 589 RPPPGPPPPGPPPPGPAPPGA 609 Score = 22.7 bits (47), Expect(2) = 7.0 Identities = 10/21 (47%), Positives = 11/21 (52%) Frame = +1 Query: 76 QPPTAPPPTGRTLLRAAPPVA 138 +PP PPP G APP A Sbjct: 568 RPPPGPPPPGPPPPGPAPPGA 588 Score = 22.7 bits (47), Expect(2) = 7.0 Identities = 10/21 (47%), Positives = 11/21 (52%) Frame = +1 Query: 76 QPPTAPPPTGRTLLRAAPPVA 138 +PP PPP G APP A Sbjct: 547 RPPPGPPPPGPPPPGPAPPGA 567 Score = 22.7 bits (47), Expect(2) = 7.0 Identities = 10/21 (47%), Positives = 11/21 (52%) Frame = +1 Query: 76 QPPTAPPPTGRTLLRAAPPVA 138 +PP PPP G APP A Sbjct: 526 RPPPGPPPPGPPPPGPAPPGA 546 Score = 22.7 bits (47), Expect(2) = 7.0 Identities = 10/21 (47%), Positives = 11/21 (52%) Frame = +1 Query: 76 QPPTAPPPTGRTLLRAAPPVA 138 +PP PPP G APP A Sbjct: 484 RPPPGPPPPGPPPPGPAPPGA 504 Score = 22.7 bits (47), Expect(2) = 2.0 Identities = 10/21 (47%), Positives = 11/21 (52%) Frame = +1 Query: 76 QPPTAPPPTGRTLLRAAPPVA 138 +PP PPP G APP A Sbjct: 393 RPPPGPPPPGPPPPGPAPPGA 413 Score = 22.7 bits (47), Expect(2) = 7.0 Identities = 10/21 (47%), Positives = 11/21 (52%) Frame = +1 Query: 76 QPPTAPPPTGRTLLRAAPPVA 138 +PP PPP G APP A Sbjct: 351 RPPPGPPPPGPPPPGPAPPGA 371 Score = 22.7 bits (47), Expect(2) = 7.0 Identities = 10/21 (47%), Positives = 11/21 (52%) Frame = +1 Query: 76 QPPTAPPPTGRTLLRAAPPVA 138 +PP PPP G APP A Sbjct: 330 RPPPGPPPPGPPPPGPAPPGA 350 Score = 22.7 bits (47), Expect(2) = 7.0 Identities = 10/21 (47%), Positives = 11/21 (52%) Frame = +1 Query: 76 QPPTAPPPTGRTLLRAAPPVA 138 +PP PPP G APP A Sbjct: 309 RPPPGPPPPGPPPPGPAPPGA 329 Score = 22.7 bits (47), Expect(2) = 7.0 Identities = 10/21 (47%), Positives = 11/21 (52%) Frame = +1 Query: 76 QPPTAPPPTGRTLLRAAPPVA 138 +PP PPP G APP A Sbjct: 288 RPPPGPPPPGPPPPGPAPPGA 308 Score = 22.7 bits (47), Expect(2) = 7.0 Identities = 10/21 (47%), Positives = 11/21 (52%) Frame = +1 Query: 76 QPPTAPPPTGRTLLRAAPPVA 138 +PP PPP G APP A Sbjct: 267 RPPPGPPPPGPPPPGPAPPGA 287 Score = 22.7 bits (47), Expect(2) = 7.0 Identities = 10/21 (47%), Positives = 11/21 (52%) Frame = +1 Query: 76 QPPTAPPPTGRTLLRAAPPVA 138 +PP PPP G APP A Sbjct: 246 RPPPGPPPLGPPPPGPAPPGA 266 Score = 22.7 bits (47), Expect(2) = 7.0 Identities = 10/21 (47%), Positives = 11/21 (52%) Frame = +1 Query: 76 QPPTAPPPTGRTLLRAAPPVA 138 +PP PPP G APP A Sbjct: 225 RPPPGPPPPGPPPPGPAPPGA 245 Score = 22.7 bits (47), Expect(2) = 7.0 Identities = 10/21 (47%), Positives = 11/21 (52%) Frame = +1 Query: 76 QPPTAPPPTGRTLLRAAPPVA 138 +PP PPP G APP A Sbjct: 204 RPPPGPPPPGPPPPGPAPPGA 224 Score = 22.7 bits (47), Expect(2) = 7.0 Identities = 10/21 (47%), Positives = 11/21 (52%) Frame = +1 Query: 76 QPPTAPPPTGRTLLRAAPPVA 138 +PP PPP G APP A Sbjct: 183 RPPPGPPPPGPPPPGPAPPGA 203 Score = 22.7 bits (47), Expect(2) = 7.0 Identities = 10/21 (47%), Positives = 11/21 (52%) Frame = +1 Query: 76 QPPTAPPPTGRTLLRAAPPVA 138 +PP PPP G APP A Sbjct: 141 RPPPGPPPPGPPPPGPAPPGA 161 Score = 22.7 bits (47), Expect(2) = 7.0 Identities = 10/21 (47%), Positives = 11/21 (52%) Frame = +1 Query: 76 QPPTAPPPTGRTLLRAAPPVA 138 +PP PPP G APP A Sbjct: 120 RPPPGPPPPGPPPPGPAPPGA 140 Score = 22.7 bits (47), Expect(2) = 7.0 Identities = 10/21 (47%), Positives = 11/21 (52%) Frame = +1 Query: 76 QPPTAPPPTGRTLLRAAPPVA 138 +PP PPP G APP A Sbjct: 99 RPPPGPPPPGPPPPGPAPPGA 119 Score = 22.7 bits (47), Expect(2) = 7.0 Identities = 10/21 (47%), Positives = 11/21 (52%) Frame = +1 Query: 76 QPPTAPPPTGRTLLRAAPPVA 138 +PP PPP G APP A Sbjct: 78 RPPPGPPPPGPPPPGPAPPGA 98
>SNIP_MOUSE (Q9QWI6) p130Cas-associated protein (p140Cap) (SNAP-25-interacting| protein) (SNIP) Length = 1250 Score = 30.8 bits (68), Expect = 2.5 Identities = 21/65 (32%), Positives = 28/65 (43%), Gaps = 10/65 (15%) Frame = +2 Query: 176 RRRSSLSARVEVAAPQTAP------PRHLPSADPASPSARCSGGSPPSL----ISHLAAR 325 RR ++LS +A+ P P LPS P+ +GG PPS + H A R Sbjct: 360 RRLNNLSPASHLASSSPPPGLPSGLPSGLPSGSPSRSRLSYAGGRPPSYAGSPVHHAAER 419 Query: 326 SGSMP 340 G P Sbjct: 420 LGGAP 424
>SNIP_RAT (Q9QXY2) p130Cas-associated protein (p140Cap) (SNAP-25-interacting| protein) (SNIP) Length = 1197 Score = 30.8 bits (68), Expect = 2.5 Identities = 21/65 (32%), Positives = 28/65 (43%), Gaps = 10/65 (15%) Frame = +2 Query: 176 RRRSSLSARVEVAAPQTAP------PRHLPSADPASPSARCSGGSPPSL----ISHLAAR 325 RR ++LS +A+ P P LPS P+ +GG PPS + H A R Sbjct: 327 RRLNNLSPASHLASSSPPPGLPSGLPSGLPSGSPSRSRLSYAGGRPPSYAGSPVHHAAER 386 Query: 326 SGSMP 340 G P Sbjct: 387 LGGAP 391
>FOXO4_HUMAN (P98177) Putative fork head domain transcription factor AFX1| (Forkhead box protein O4) Length = 505 Score = 30.4 bits (67), Expect = 3.3 Identities = 17/54 (31%), Positives = 28/54 (51%) Frame = +2 Query: 173 QRRRSSLSARVEVAAPQTAPPRHLPSADPASPSARCSGGSPPSLISHLAARSGS 334 +RR +S+ + ++ ++ P+ PS PA P G +P S + H A SGS Sbjct: 192 RRRAASMDSSSKLLRGRSKAPKKKPSVLPAPPE----GATPTSPVGHFAKWSGS 241
>ELK1_HUMAN (P19419) ETS domain-containing protein Elk-1| Length = 428 Score = 30.4 bits (67), Expect = 3.3 Identities = 23/64 (35%), Positives = 30/64 (46%), Gaps = 9/64 (14%) Frame = +2 Query: 182 RSSLSARVEVAAPQTAPPRH------LPSADPASPSARCSGG---SPPSLISHLAARSGS 334 RS L + + + Q PP H LPSA PA +A SG SP L + L A Sbjct: 155 RSGLYSTFTIQSLQPQPPPHPRPAVVLPSAAPAGAAAPPSGSRSTSPSPLEACLEAEEAG 214 Query: 335 MPLR 346 +PL+ Sbjct: 215 LPLQ 218
>HXA3_MOUSE (P02831) Homeobox protein Hox-A3 (Hox-1.5) (MO-10)| Length = 443 Score = 27.7 bits (60), Expect(2) = 3.5 Identities = 17/47 (36%), Positives = 19/47 (40%), Gaps = 2/47 (4%) Frame = +2 Query: 218 PQTAPPRHLPSADPASPSARCSGGSPP--SLISHLAARSGSMPLRTA 352 PQ APP P P P A PP S+ +A S P TA Sbjct: 96 PQAAPPAPQPPQPPPQPPAPTPAAPPPPSSVSPPQSANSNPTPASTA 142 Score = 21.2 bits (43), Expect(2) = 3.5 Identities = 9/20 (45%), Positives = 10/20 (50%) Frame = +1 Query: 79 PPTAPPPTGRTLLRAAPPVA 138 PP+ PP G L PP A Sbjct: 79 PPSQPPGLGEPPLPPPPPQA 98
>APX6_ORYSA (P0C0L1) Probable L-ascorbate peroxidase 6, chloroplast precursor| (EC 1.11.1.11) Length = 309 Score = 30.0 bits (66), Expect = 4.3 Identities = 14/25 (56%), Positives = 18/25 (72%), Gaps = 1/25 (4%) Frame = +2 Query: 200 RVEVAAPQTAPPR-HLPSADPASPS 271 RV+VAAP+ PP LP+A P SP+ Sbjct: 150 RVDVAAPEQCPPEGRLPAAGPPSPA 174
>PK1_STRTO (Q9KIG4) Serine/threonine-protein kinase PK-1 (EC 2.7.11.1)| (stoPK-1) Length = 641 Score = 30.0 bits (66), Expect = 4.3 Identities = 14/28 (50%), Positives = 15/28 (53%) Frame = +1 Query: 58 HRTSTHQPPTAPPPTGRTLLRAAPPVAV 141 HRTS + P PP GRT LR P V Sbjct: 330 HRTSRFRSPPPLPPRGRTALRRGPMAIV 357
>PCQAP_HUMAN (Q96RN5) Positive cofactor 2 glutamine/Q-rich-associated protein| (PC2 glutamine/Q-rich-associated protein) (TPA-inducible gene 1 protein) (TIG-1) (Activator-recruited cofactor 105 kDa component) (ARC105) (CTG repeat protein 7a) Length = 788 Score = 30.0 bits (66), Expect = 4.3 Identities = 20/52 (38%), Positives = 25/52 (48%), Gaps = 4/52 (7%) Frame = +2 Query: 185 SSLSARVEVAAPQTAPPRHLPSADPASPSAR----CSGGSPPSLISHLAARS 328 SS S +V PQ+ PP PS P PS++ S G PS S L + S Sbjct: 434 SSPSPGQQVQTPQSMPPPPQPSPQPGQPSSQPNSNVSSGPAPSPSSFLPSPS 485
>OSA_DROME (Q8IN94) Trithorax group protein osa (Protein eyelid)| Length = 2716 Score = 26.6 bits (57), Expect(2) = 4.9 Identities = 14/41 (34%), Positives = 17/41 (41%) Frame = +2 Query: 218 PQTAPPRHLPSADPASPSARCSGGSPPSLISHLAARSGSMP 340 PQ PP + P P A +G PP A + SMP Sbjct: 654 PQQYPPGNYPPRPQYPPGAYATGPPPPPTSQAGAGGANSMP 694 Score = 21.6 bits (44), Expect(2) = 4.9 Identities = 9/18 (50%), Positives = 9/18 (50%) Frame = +1 Query: 79 PPTAPPPTGRTLLRAAPP 132 PP APPP A PP Sbjct: 597 PPPAPPPNQGMNNMATPP 614
>MMP9_CANFA (O18733) Matrix metalloproteinase-9 precursor (EC 3.4.24.35)| (MMP-9) (92 kDa type IV collagenase) (92 kDa gelatinase) (Gelatinase B) (GELB) Length = 704 Score = 25.8 bits (55), Expect(2) = 5.5 Identities = 10/19 (52%), Positives = 11/19 (57%) Frame = +1 Query: 76 QPPTAPPPTGRTLLRAAPP 132 QPPTAPP T+ PP Sbjct: 452 QPPTAPPTAPPTVCATGPP 470 Score = 22.3 bits (46), Expect(2) = 5.5 Identities = 10/26 (38%), Positives = 11/26 (42%) Frame = +2 Query: 218 PQTAPPRHLPSADPASPSARCSGGSP 295 P T P P+A P P A G P Sbjct: 469 PPTTRPSERPTAGPTGPPAAGPTGPP 494
>POLG_HCVT5 (O92529) Genome polyprotein [Contains: Core protein p21 (Capsid| protein C) (p21); Core protein p19; Envelope glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68) (gp70); p7; Protease NS2-3 (EC 3.4.22.-) (p23); Serine protease/N Length = 3018 Score = 29.6 bits (65), Expect = 5.6 Identities = 23/79 (29%), Positives = 34/79 (43%), Gaps = 5/79 (6%) Frame = +2 Query: 203 VEVAAPQTAPPRHLPSADPASPSARCSGGSPPSLISHLAARSGSMPLRTACLW-----WI 367 V V P H+ + + S R GSPPSL S A++ + L+ C Sbjct: 2172 VTVVTSMLTDPSHITAE---TASRRLKRGSPPSLASSSASQLSAPSLKATCTANGDHPDA 2228 Query: 368 RIAEDNLLVARRVSSNSTK 424 + E NLL + + SN T+ Sbjct: 2229 ELIEANLLWRQEMGSNITR 2247
>POLG_HCV6A (Q5I2N3) Genome polyprotein [Contains: Core protein p21 (Capsid| protein C) (p21); Core protein p19; Envelope glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68) (gp70); p7; Protease NS2-3 (EC 3.4.22.-) (p23); Serine protease/N Length = 3018 Score = 29.6 bits (65), Expect = 5.6 Identities = 22/79 (27%), Positives = 34/79 (43%), Gaps = 5/79 (6%) Frame = +2 Query: 203 VEVAAPQTAPPRHLPSADPASPSARCSGGSPPSLISHLAARSGSMPLRTACLWW-----I 367 V V P H+ + + S R GSPPSL S A++ + L+ C + Sbjct: 2172 VTVVTSMLTDPTHITAE---TASRRLKRGSPPSLASSSASQLSAPSLKATCTTSKDHPDM 2228 Query: 368 RIAEDNLLVARRVSSNSTK 424 + E NLL + + N T+ Sbjct: 2229 ELIEANLLWRQEMGGNITR 2247
>P85B_HUMAN (O00459) Phosphatidylinositol 3-kinase regulatory beta subunit| (PI3-kinase p85-beta subunit) (PtdIns-3-kinase p85-beta) Length = 728 Score = 29.6 bits (65), Expect = 5.6 Identities = 16/30 (53%), Positives = 19/30 (63%) Frame = +2 Query: 215 APQTAPPRHLPSADPASPSARCSGGSPPSL 304 AP PP+ P A PA P+ +GGSPPSL Sbjct: 298 APPALPPKP-PKAKPA-PTVLANGGSPPSL 325
>POLG_HCVTW (P29846) Genome polyprotein [Contains: Core protein p21 (Capsid| protein C) (p21); Core protein p19; Envelope glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68) (gp70); p7; Protease NS2-3 (EC 3.4.22.-) (p23); Serine protease/N Length = 3009 Score = 29.6 bits (65), Expect = 5.6 Identities = 22/79 (27%), Positives = 35/79 (44%), Gaps = 5/79 (6%) Frame = +2 Query: 203 VEVAAPQTAPPRHLPSADPASPSARCSGGSPPSLISHLAARSGSMPLRTACLWW-----I 367 V V P H+ + + R + GSPPSL S A++ ++ L+ AC Sbjct: 2167 VAVLTSMLTDPSHITAE---TAKRRLARGSPPSLASSSASQLSALSLKAACTTRHTPPDA 2223 Query: 368 RIAEDNLLVARRVSSNSTK 424 + E NLL + + N T+ Sbjct: 2224 DLIEANLLWRQEMGGNITR 2242
>WASL_HUMAN (O00401) Neural Wiskott-Aldrich syndrome protein (N-WASP)| Length = 505 Score = 29.6 bits (65), Expect = 5.6 Identities = 15/34 (44%), Positives = 17/34 (50%) Frame = +2 Query: 197 ARVEVAAPQTAPPRHLPSADPASPSARCSGGSPP 298 +R VA P P R P PA PS+ SG PP Sbjct: 328 SRPSVAVPPPPPNRMYPPPPPALPSSAPSGPPPP 361
>ZC3H3_HUMAN (Q8IXZ2) Zinc finger CCCH-type domain-containing protein 3| Length = 948 Score = 29.3 bits (64), Expect = 7.4 Identities = 23/63 (36%), Positives = 29/63 (46%), Gaps = 5/63 (7%) Frame = +2 Query: 182 RSSLSARVEVAAPQTAPPRHLP--SADPASP---SARCSGGSPPSLISHLAARSGSMPLR 346 R + S+ AA APP H P SA P+S S+ S SPP+ + H A L Sbjct: 841 RQTPSSAALTAAAVAAPP-HCPGGSASPSSSKASSSSSSSSSPPASLDHEAPSLQEAALA 899 Query: 347 TAC 355 AC Sbjct: 900 AAC 902
>EBNA1_EBV (P03211) Epstein-Barr nuclear antigen 1 (EBV nuclear antigen 1)| (EBNA-1) Length = 641 Score = 29.3 bits (64), Expect = 7.4 Identities = 21/62 (33%), Positives = 25/62 (40%) Frame = -2 Query: 346 SQGHGAGPGCKMRNEGGRRSTRAPC*RRSRIGGGKVARGSSLGRGNLNPS*QGGAAALMG 167 S G G G G R GG R R+R G + ARG GRG P ++ G Sbjct: 334 SGGRGRG-GSGGRGRGGSGGRRGRGRERARGGSRERARGRGRGRGEKRPRSPSSQSSSSG 392 Query: 166 GP 161 P Sbjct: 393 SP 394
>TPO_MOUSE (P40226) Thrombopoietin precursor (Megakaryocyte colony-stimulating| factor) (Myeloproliferative leukemia virus oncogene ligand) (C-mpl ligand) (ML) (Megakaryocyte growth and development factor) (MGDF) Length = 356 Score = 28.9 bits (63), Expect = 9.6 Identities = 18/46 (39%), Positives = 22/46 (47%) Frame = +2 Query: 215 APQTAPPRHLPSADPASPSARCSGGSPPSLISHLAARSGSMPLRTA 352 +P AP H P P SP+ + GSPP L S +MP TA Sbjct: 296 SPSLAPDGHTPF--PPSPALPTTHGSPPQLHPLFPDPSTTMPNSTA 339
>POLG_HCVVN (O92530) Genome polyprotein [Contains: Core protein p21 (Capsid| protein C) (p21); Core protein p19; Envelope glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68) (gp70); p7; Protease NS2-3 (EC 3.4.22.-) (p23); Serine protease/N Length = 3012 Score = 28.9 bits (63), Expect = 9.6 Identities = 23/79 (29%), Positives = 33/79 (41%), Gaps = 5/79 (6%) Frame = +2 Query: 203 VEVAAPQTAPPRHLPSADPASPSARCSGGSPPSLISHLAARSGSMPLRTACLWW-----I 367 V + P H+ + A AR GSPPSL S A++ + L+ C Sbjct: 2165 VVILTSMLTDPDHITAETAARRLAR---GSPPSLASSSASQLSAPSLKATCTTAGKHPDA 2221 Query: 368 RIAEDNLLVARRVSSNSTK 424 + E NLL + V N T+ Sbjct: 2222 ELIEANLLWRQEVGGNITR 2240
>EVL_PONPY (Q5R896) Ena/VASP-like protein (Ena/vasodilator stimulated| phosphoprotein-like) Length = 422 Score = 28.9 bits (63), Expect = 9.6 Identities = 18/42 (42%), Positives = 20/42 (47%) Frame = +2 Query: 173 QRRRSSLSARVEVAAPQTAPPRHLPSADPASPSARCSGGSPP 298 Q+R+ SL R P PP H SA AS CSG PP Sbjct: 153 QQRQESLERRTSATGP-ILPPGHPSSA--ASAPVSCSGPPPP 191
>POLG_HCVVP (O92532) Genome polyprotein [Contains: Core protein p21 (Capsid| protein C) (p21); Core protein p19; Envelope glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68) (gp70); p7; Protease NS2-3 (EC 3.4.22.-) (p23); Serine protease/N Length = 3014 Score = 28.9 bits (63), Expect = 9.6 Identities = 23/79 (29%), Positives = 33/79 (41%), Gaps = 5/79 (6%) Frame = +2 Query: 203 VEVAAPQTAPPRHLPSADPASPSARCSGGSPPSLISHLAARSGSMPLRTACLWW-----I 367 V V P H+ + A AR GSPPSL S A++ + L+ C Sbjct: 2168 VTVVTSMLIDPSHVTAEAAARRLAR---GSPPSLASSSASQLSAPSLKATCTMHGAHPDA 2224 Query: 368 RIAEDNLLVARRVSSNSTK 424 + E NLL + + N T+ Sbjct: 2225 ELIEANLLWRQEMGGNITR 2243
>MLL2_HUMAN (O14686) Myeloid/lymphoid or mixed-lineage leukemia protein 2| (ALL1-related protein) Length = 5262 Score = 28.9 bits (63), Expect = 9.6 Identities = 14/33 (42%), Positives = 16/33 (48%) Frame = -3 Query: 531 ASVPAWPFPSPCGIMSCCLLQPRAAPQQERTRV 433 A P P P P SCC L PR+ P +RV Sbjct: 2104 AQPPLTPRPQPPPPESCCALPPRSLPSDPFSRV 2136
>ACH1_MANSE (P91766) Acetylcholine receptor protein, alpha-like subunit| precursor (MARA1) Length = 516 Score = 28.9 bits (63), Expect = 9.6 Identities = 13/30 (43%), Positives = 16/30 (53%) Frame = +2 Query: 227 APPRHLPSADPASPSARCSGGSPPSLISHL 316 APPR P A P +P A C+ P+L L Sbjct: 391 APPRPPPCAPPLAPCAACAPAEAPALCDAL 420
>ICEN_XANCT (P18127) Ice nucleation protein| Length = 1567 Score = 28.9 bits (63), Expect = 9.6 Identities = 10/35 (28%), Positives = 23/35 (65%) Frame = +2 Query: 197 ARVEVAAPQTAPPRHLPSADPASPSARCSGGSPPS 301 A +++AAP H+P+A+P++P+ + + + P+ Sbjct: 114 AALQLAAPAAPAHVHMPAAEPSAPATQATSATLPT 148
>EVL_HUMAN (Q9UI08) Ena/VASP-like protein (Ena/vasodilator stimulated| phosphoprotein-like) Length = 416 Score = 28.9 bits (63), Expect = 9.6 Identities = 18/42 (42%), Positives = 20/42 (47%) Frame = +2 Query: 173 QRRRSSLSARVEVAAPQTAPPRHLPSADPASPSARCSGGSPP 298 Q+R+ SL R P PP H SA AS CSG PP Sbjct: 147 QQRQESLERRTSATGP-ILPPGHPSSA--ASAPVSCSGPPPP 185 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 70,538,469 Number of Sequences: 219361 Number of extensions: 1505772 Number of successful extensions: 6554 Number of sequences better than 10.0: 32 Number of HSP's better than 10.0 without gapping: 5576 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6523 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4258037034 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
