Clone Name | bart44c02 |
---|---|
Clone Library Name | barley_pub |
>gb|AC147460.1| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNAb0050G15, complete sequence Length = 126156 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 349 ctagacctcagcctcggcatctccttgtctcccgg 383 ||||||||||||||||||||||||||||| ||||| Sbjct: 107817 ctagacctcagcctcggcatctccttgtcacccgg 107851
>gb|AC123524.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0052C03, complete sequence Length = 157178 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 349 ctagacctcagcctcggcatctccttgtctcccgg 383 ||||||||||||||||||||||||||||| ||||| Sbjct: 41661 ctagacctcagcctcggcatctccttgtcacccgg 41695
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 349 ctagacctcagcctcggcatctccttgtctcccgg 383 ||||||||||||||||||||||||||||| ||||| Sbjct: 6258383 ctagacctcagcctcggcatctccttgtcacccgg 6258417
>dbj|AK102073.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033082G16, full insert sequence Length = 2984 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 349 ctagacctcagcctcggcatctccttgtctcccgg 383 ||||||||||||||||||||||||||||| ||||| Sbjct: 311 ctagacctcagcctcggcatctccttgtcacccgg 345
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 349 ctagacctcagcctcggcatctccttgtctcccgg 383 ||||||||||||||||||||||||||||| ||||| Sbjct: 6324850 ctagacctcagcctcggcatctccttgtcacccgg 6324884
>emb|AL512307.12| Human DNA sequence from clone RP11-285B6 on chromosome 1 Contains part of the RGS7 gene for regulator of G-protein signalling 7, complete sequence Length = 182323 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 125 cctcttctcatatctgttgcttcca 149 |||||||||||||||||||| |||| Sbjct: 162320 cctcttctcatatctgttgcatcca 162344
>gb|AC116386.9| Mus musculus chromosome 15, clone RP23-37B16, complete sequence Length = 185556 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 118 cacccctcctcttctcatat 137 |||||||||||||||||||| Sbjct: 23582 cacccctcctcttctcatat 23563
>gb|AC158974.8| Mus musculus chromosome 15, clone RP24-252G18, complete sequence Length = 170539 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 118 cacccctcctcttctcatat 137 |||||||||||||||||||| Sbjct: 20528 cacccctcctcttctcatat 20547
>gb|AC165072.13| Mus musculus chromosome 18, clone RP23-345E17, complete sequence Length = 223019 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 84 ccatctttctgctcaccaac 103 |||||||||||||||||||| Sbjct: 150283 ccatctttctgctcaccaac 150264
>gb|AC146377.5| Pan troglodytes BAC clone RP43-79B6 from 7, complete sequence Length = 195459 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 283 gcagtcaccggcatgaaggtggca 306 ||||||||| |||||||||||||| Sbjct: 16186 gcagtcaccagcatgaaggtggca 16209
>gb|AC124190.4| Mus musculus BAC clone RP23-267M9 from 3, complete sequence Length = 167681 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 460 ggtcgggtgcagggcagtgg 479 |||||||||||||||||||| Sbjct: 82283 ggtcgggtgcagggcagtgg 82264
>gb|AC010126.3| Homo sapiens BAC clone GS1-502B2 from 7, complete sequence Length = 56163 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 283 gcagtcaccggcatgaaggtggca 306 ||||||||| |||||||||||||| Sbjct: 45501 gcagtcaccagcatgaaggtggca 45524
>gb|AC116120.6| Mus musculus chromosome 6, clone RP23-78P7, complete sequence Length = 174411 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 tctgctcaccaactcactca 110 |||||||||||||||||||| Sbjct: 60421 tctgctcaccaactcactca 60402
>emb|BX294027.1|NCB8G12 Neurospora crassa DNA linkage group V BAC contig B8G12 Length = 154038 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 12 atcaaccactaccactgcaccatc 35 ||||||||| |||||||||||||| Sbjct: 26993 atcaaccaccaccactgcaccatc 26970
>gb|AC104996.4| Homo sapiens chromosome 17, clone RP11-1148O4, complete sequence Length = 155848 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 127 tcttctcatatctgttgctt 146 |||||||||||||||||||| Sbjct: 97761 tcttctcatatctgttgctt 97780
>gb|AC021086.4|AC021086 Homo sapiens chromosome 5 clone CTD-2001C12, complete sequence Length = 137063 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 13 tcaaccactaccactgcacc 32 |||||||||||||||||||| Sbjct: 87003 tcaaccactaccactgcacc 86984
>gb|AC107977.13| Homo sapiens chromosome 15, clone CTD-2611K5, complete sequence Length = 152619 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 123 ctcctcttctcatatctgtt 142 |||||||||||||||||||| Sbjct: 94784 ctcctcttctcatatctgtt 94803
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 109 cattcagctcacccctcctcttct 132 ||||||||||| |||||||||||| Sbjct: 2109372 cattcagctcagccctcctcttct 2109395
>gb|AC010382.4|AC010382 Homo sapiens chromosome 5 clone CTD-2068C11, complete sequence Length = 151365 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 13 tcaaccactaccactgcacc 32 |||||||||||||||||||| Sbjct: 120609 tcaaccactaccactgcacc 120590 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,536,078 Number of Sequences: 3902068 Number of extensions: 4536078 Number of successful extensions: 76161 Number of sequences better than 10.0: 19 Number of HSP's better than 10.0 without gapping: 19 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 76037 Number of HSP's gapped (non-prelim): 124 length of query: 558 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 535 effective length of database: 17,143,297,704 effective search space: 9171664271640 effective search space used: 9171664271640 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)