Clone Name | bart44c01 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | YQJG_ECOLI (P42620) Hypothetical protein yqjG | 75 | 8e-14 | 2 | ECM4_YEAST (P36156) Extracellular matrix protein 4 | 52 | 1e-06 | 3 | YM85_YEAST (Q04806) Hypothetical 42.4 kDa protein in FAA4-HOR7 i... | 46 | 5e-05 | 4 | YK67_CAEEL (P34345) Hypothetical protein C29E4.7 in chromosome III | 33 | 0.60 | 5 | IN21_MAIZE (P49248) IN2-1 protein | 31 | 1.7 | 6 | GSTO1_RAT (Q9Z339) Glutathione transferase omega-1 (EC 2.5.1.18)... | 31 | 2.3 | 7 | GSTO1_MOUSE (O09131) Glutathione transferase omega-1 (EC 2.5.1.1... | 30 | 3.0 | 8 | GLRX2_SYNY3 (P73492) Probable glutaredoxin ssr2061 | 29 | 8.6 |
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>YQJG_ECOLI (P42620) Hypothetical protein yqjG| Length = 328 Score = 75.5 bits (184), Expect = 8e-14 Identities = 50/129 (38%), Positives = 63/129 (48%), Gaps = 6/129 (4%) Frame = +1 Query: 145 DEVTDTGAFDRTPSTFRSFVSSDGA------ARFPAVAGRYHLYVSYACPWASRCLAYLK 306 D + G F R+ S FR+++++DGA F A RYHLYVS ACPWA R L K Sbjct: 15 DTKSTGGKFQRSASAFRNWLTADGAPGPTGTGGFIAEKDRYHLYVSLACPWAHRTLIMRK 74 Query: 307 LKGLDHAISFSSVKPIFERTRESDDHLGWVFPAAAGEVPGADPDPFNGARSVRDLYEIAS 486 LKGL+ IS S V P+ GW F PGA D + LY A Sbjct: 75 LKGLEPFISVSVVNPLMLEN-------GWTFD---DSFPGATGDTLYQNEFLYQLYLHAD 124 Query: 487 KNYTGKPTV 513 +Y+G+ TV Sbjct: 125 PHYSGRVTV 133
>ECM4_YEAST (P36156) Extracellular matrix protein 4| Length = 370 Score = 51.6 bits (122), Expect = 1e-06 Identities = 31/61 (50%), Positives = 33/61 (54%) Frame = +1 Query: 163 GAFDRTPSTFRSFVSSDGAARFPAVAGRYHLYVSYACPWASRCLAYLKLKGLDHAISFSS 342 GAF R S+FR +S PA GRY LYVS ACPWA R L LKGL I S Sbjct: 11 GAFKRQVSSFRETISKQHPIYKPA-KGRYWLYVSLACPWAHRTLITRALKGLTSVIGCSV 69 Query: 343 V 345 V Sbjct: 70 V 70
>YM85_YEAST (Q04806) Hypothetical 42.4 kDa protein in FAA4-HOR7 intergenic| region Length = 366 Score = 46.2 bits (108), Expect = 5e-05 Identities = 27/57 (47%), Positives = 30/57 (52%) Frame = +1 Query: 169 FDRTPSTFRSFVSSDGAARFPAVAGRYHLYVSYACPWASRCLAYLKLKGLDHAISFS 339 F R S FR +S+D PA GRY LYV+ CPWA R L LKGL I S Sbjct: 13 FKRQSSPFREIISADHPIYKPA-KGRYWLYVALPCPWAQRTLITRALKGLAPIIGCS 68
>YK67_CAEEL (P34345) Hypothetical protein C29E4.7 in chromosome III| Length = 250 Score = 32.7 bits (73), Expect = 0.60 Identities = 13/36 (36%), Positives = 19/36 (52%) Frame = +1 Query: 214 GAARFPAVAGRYHLYVSYACPWASRCLAYLKLKGLD 321 G A P G + +Y CPWA R + Y+ KG++ Sbjct: 14 GDAEPPLSKGSFRVYNMRFCPWAERAMLYVAAKGIE 49
>IN21_MAIZE (P49248) IN2-1 protein| Length = 243 Score = 31.2 bits (69), Expect = 1.7 Identities = 25/93 (26%), Positives = 34/93 (36%), Gaps = 2/93 (2%) Frame = +1 Query: 229 PAVAGRYHLYVSYACPWASRCLAYLKLKGLDHAISFSSVKPIFERTRESDDHLGWVFPA- 405 P G LY+ Y CP+A R LKGL + ++ + D W Sbjct: 27 PVFDGTTRLYICYFCPFAQRAWVTRNLKGLQDKMELVAI--------DLQDKPAWYKDKV 78 Query: 406 -AAGEVPGADPDPFNGARSVRDLYEIASKNYTG 501 A G VP + D S+ DL N+ G Sbjct: 79 YAQGTVPSLEHDSEVRGESL-DLIRYIDSNFDG 110
>GSTO1_RAT (Q9Z339) Glutathione transferase omega-1 (EC 2.5.1.18) (GSTO 1-1)| (Glutathione-dependent dehydroascorbate reductase) Length = 241 Score = 30.8 bits (68), Expect = 2.3 Identities = 14/34 (41%), Positives = 18/34 (52%) Frame = +1 Query: 229 PAVAGRYHLYVSYACPWASRCLAYLKLKGLDHAI 330 P G+ +Y CP+A R L LK KG+ H I Sbjct: 18 PVPEGQIRVYSMRFCPFAQRTLMVLKAKGIRHEI 51
>GSTO1_MOUSE (O09131) Glutathione transferase omega-1 (EC 2.5.1.18) (GSTO 1-1)| (p28) Length = 240 Score = 30.4 bits (67), Expect = 3.0 Identities = 13/34 (38%), Positives = 18/34 (52%) Frame = +1 Query: 229 PAVAGRYHLYVSYACPWASRCLAYLKLKGLDHAI 330 P G+ +Y CP+A R L LK KG+ H + Sbjct: 18 PVPEGQIRVYSMRFCPFAQRTLMVLKAKGIRHEV 51
>GLRX2_SYNY3 (P73492) Probable glutaredoxin ssr2061| Length = 88 Score = 28.9 bits (63), Expect = 8.6 Identities = 12/30 (40%), Positives = 18/30 (60%) Frame = +1 Query: 232 AVAGRYHLYVSYACPWASRCLAYLKLKGLD 321 AV+ + +Y CP+ R LA LK KG++ Sbjct: 2 AVSAKIEIYTWSTCPFCMRALALLKRKGVE 31 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 38,461,947 Number of Sequences: 219361 Number of extensions: 568236 Number of successful extensions: 2399 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 2265 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2397 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3812186532 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)