Clone Name | bart44b12 |
---|---|
Clone Library Name | barley_pub |
>HCBT1_DIACA (O24645) Anthranilate N-benzoyltransferase protein 1 (EC 2.3.1.144)| (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 1) Length = 445 Score = 57.4 bits (137), Expect = 3e-08 Identities = 54/187 (28%), Positives = 84/187 (44%), Gaps = 19/187 (10%) Frame = +3 Query: 18 NNLDLY---PNSAQGSVTCVYPKPPTGDFN---SVVAAFDAH-----LPSFLNYFYPMAG 164 +N+D+ P S G+V +Y +P + N S FDA+ L L FYPMAG Sbjct: 25 SNIDMILRTPYSHTGAVL-IYKQPDNNEDNIHPSSSMYFDANILIEALSKALVPFYPMAG 83 Query: 165 RIAVNPSSGMPELHCFNQGTELIVGDAGVELWTLDWGLSEESLKRIQLP---YAAEVP-- 329 R+ +N E+ C +G + ++ L + L R+ +P Y+ + Sbjct: 84 RLKIN--GDRYEIDCNAEGALFVEAESSHVLEDFGDFRPNDELHRVMVPTCDYSKGISSF 141 Query: 330 --LSVQLVSFTCGGFAVVWATNNLIGDGNVGIMLVRMWSELVRSGTISEGGPSHDRSL-F 500 L VQL F CGG ++ +A ++ + DG W+ + + G + P HDR L Sbjct: 142 PLLMVQLTRFRCGGVSIGFAQHHHVCDGMAHFEFNNSWARIAK-GLLPALEPVHDRYLHL 200 Query: 501 SPREPPQ 521 PR PPQ Sbjct: 201 RPRNPPQ 207
>HCBT3_DIACA (O23918) Anthranilate N-benzoyltransferase protein 3 (EC 2.3.1.144)| (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 3) Length = 445 Score = 52.4 bits (124), Expect = 8e-07 Identities = 50/178 (28%), Positives = 78/178 (43%), Gaps = 16/178 (8%) Frame = +3 Query: 36 PNSAQGSVTCVYPKPPTGDFN---SVVAAFDAH-----LPSFLNYFYPMAGRIAVNPSSG 191 P S G+V +Y +P + N S FDA+ L L +YPMAGR+ +N Sbjct: 34 PYSHTGAVL-IYKQPDNNEDNIQPSSSMYFDANILIEALSKALVPYYPMAGRLKIN--GD 90 Query: 192 MPELHCFNQGTELIVGDAGVELWTLDWGLSEESLKRIQLP---YAAEVP----LSVQLVS 350 E+ C +G + ++ L + L R+ +P Y+ + L VQL Sbjct: 91 RYEIDCNGEGALFVEAESSHVLEDFGDFRPNDELHRVMVPTCDYSKGISSFPLLMVQLTR 150 Query: 351 FTCGGFAVVWATNNLIGDGNVGIMLVRMWSELVRSGTISEGGPSHDRSL-FSPREPPQ 521 F CGG ++ +A ++ + D W+ + + G + P HDR L PR PPQ Sbjct: 151 FRCGGVSIGFAQHHHVCDRMSHFEFNNSWARIAK-GLLPALEPVHDRYLHLCPRNPPQ 207
>HCBT2_DIACA (O23917) Anthranilate N-benzoyltransferase protein 2 (EC 2.3.1.144)| (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 2) Length = 446 Score = 49.3 bits (116), Expect = 7e-06 Identities = 50/178 (28%), Positives = 77/178 (43%), Gaps = 16/178 (8%) Frame = +3 Query: 36 PNSAQGSVTCVYPKPPTGDFN---SVVAAFDAH-----LPSFLNYFYPMAGRIAVNPSSG 191 P S G+V +Y +P + N S FDA+ L L +YPMAGR+ +N Sbjct: 34 PYSHTGAVL-IYKQPDNNEDNIHPSSSMYFDANILIEALSKALVPYYPMAGRLKIN--GD 90 Query: 192 MPELHCFNQGTELIVGDAGVELWTLDWGLSEESLKRIQLP---YAAEVP----LSVQLVS 350 E+ C +G + ++ L + L R+ +P Y+ + L VQL Sbjct: 91 RYEIDCNAEGALFVEAESSHVLEDFGDFRPNDELHRVMVPTCDYSKGISSFPLLMVQLTR 150 Query: 351 FTCGGFAVVWATNNLIGDGNVGIMLVRMWSELVRSGTISEGGPSHDRSL-FSPREPPQ 521 F CGG ++ +A ++ DG W+ + + G + P HDR L R PPQ Sbjct: 151 FRCGGVSIGFAQHHHACDGMSHFEFNNSWARIAK-GLLPALEPVHDRYLHLRLRNPPQ 207
>DBAT_TAXCU (Q9M6E2) 10-deacetylbaccatin III 10-O-acetyltransferase (EC| 2.3.1.167) (DBAT) Length = 440 Score = 45.8 bits (107), Expect = 8e-05 Identities = 44/139 (31%), Positives = 60/139 (43%), Gaps = 9/139 (6%) Frame = +3 Query: 126 LPSFLNYFYPMAGRIAVNPSSGMPELHCFNQGTELIVGDAGVELWTL----DWGLSEESL 293 L L Y+ P AGR+ +G E+ C +G + A +L L D+ S E L Sbjct: 68 LSKVLVYYSPFAGRLR-KKENGDLEVECTGEGALFVEAMADTDLSVLGDLDDYSPSLEQL 126 Query: 294 KRIQLPYAAEV----PLSVQLVSFTCGGFAVVWATNNLIGDG-NVGIMLVRMWSELVRSG 458 LP ++ PL VQ+ FTCGGF V + + I DG G L+ M E+ R Sbjct: 127 L-FCLPPDTDIEDIHPLVVQVTRFTCGGFVVGVSFCHGICDGLGAGQFLIAM-GEMARGE 184 Query: 459 TISEGGPSHDRSLFSPREP 515 P R L P +P Sbjct: 185 IKPSSEPIWKRELLKPEDP 203
>DBBT_TAXCU (Q9FPW3) 2-alpha-hydroxytaxane 2-O-benzoyltransferase (EC| 2.3.1.166) (TBT) (2-debenzoyl-7,13-diacetylbaccatin III-2-O-benzoyl transferase) (DBBT) Length = 440 Score = 43.9 bits (102), Expect = 3e-04 Identities = 36/136 (26%), Positives = 60/136 (44%), Gaps = 7/136 (5%) Frame = +3 Query: 126 LPSFLNYFYPMAGRIAVNPSSGMPELHCFNQGTELIVGDAGVELWTL-DWGLSEESLKRI 302 L L Y+ P AGR+ N +G E+ C +G + A +L L D+ + S +++ Sbjct: 64 LSKVLVYYPPFAGRLR-NTENGDLEVECTGEGAVFVEAMADNDLSVLQDFNEYDPSFQQL 122 Query: 303 QLPYAAEVP------LSVQLVSFTCGGFAVVWATNNLIGDGNVGIMLVRMWSELVRSGTI 464 +V L+VQ+ FTCGGF V ++ + DG L++ E+ R Sbjct: 123 VFNLREDVNIEDLHLLTVQVTRFTCGGFVVGTRFHHSVSDGKGIGQLLKGMGEMARGEFK 182 Query: 465 SEGGPSHDRSLFSPRE 512 P +R + P + Sbjct: 183 PSLEPIWNREMVKPED 198
>DBNBT_TAXCA (Q8LL69) 3'-N-debenzoyl-2'-deoxytaxol N-benzoyltransferase (EC| 2.3.1.-) (DBTNBT) Length = 441 Score = 42.4 bits (98), Expect = 9e-04 Identities = 38/144 (26%), Positives = 59/144 (40%), Gaps = 14/144 (9%) Frame = +3 Query: 126 LPSFLNYFYPMAGRIAVNPSSGMPELHCFNQGT---ELIVGDAGVELWTLD--------- 269 L L Y++P+AGR+ + G E+ C G E +V D L LD Sbjct: 69 LSKVLVYYFPLAGRLR-SKEIGELEVECTGDGALFVEAMVEDTISVLRDLDDLNPSFQQL 127 Query: 270 --WGLSEESLKRIQLPYAAEVPLSVQLVSFTCGGFAVVWATNNLIGDGNVGIMLVRMWSE 443 W + +++ + L + VQ+ FTCGG AV + + DG V +E Sbjct: 128 VFWHPLDTAIEDLHL-------VIVQVTRFTCGGIAVGVTLPHSVCDGRGAAQFVTALAE 180 Query: 444 LVRSGTISEGGPSHDRSLFSPREP 515 + R P +R L +P +P Sbjct: 181 MARGEVKPSLEPIWNRELLNPEDP 204
>T5AT_TAXCU (Q9M6F0) Taxadien-5-alpha-ol O-acetyltransferase (EC 2.3.1.162)| (Taxa-4(20),11(12)-dien-5alpha-ol-O-acetyltransferase) (Taxadienol acetyltransferase) Length = 439 Score = 40.8 bits (94), Expect = 0.003 Identities = 45/174 (25%), Positives = 70/174 (40%), Gaps = 7/174 (4%) Frame = +3 Query: 15 FNNLDLYPNSAQGSVTCVYPKPPTGDFNSVVAAFDAHLPSFLNYFYPMAGRIAVNPSSGM 194 FN L +Y S ++ P P + L L Y+ P AGR+ +G Sbjct: 43 FNALLIYNASPSPTMISADPAKPIREA----------LAKILVYYPPFAGRLR-ETENGD 91 Query: 195 PELHCFNQGTELIVGDAGVELWTL-DWGLSEESLKRI--QLPYAAEVP----LSVQLVSF 353 E+ C +G + A EL L D+ S S +++ LP L VQ+ F Sbjct: 92 LEVECTGEGAMFLEAMADNELSVLGDFDDSNPSFQQLLFSLPLDTNFKDLSLLVVQVTRF 151 Query: 354 TCGGFAVVWATNNLIGDGNVGIMLVRMWSELVRSGTISEGGPSHDRSLFSPREP 515 TCGGF V + ++ + DG ++ +E+ R P +R L +P Sbjct: 152 TCGGFVVGVSFHHGVCDGRGAAQFLKGLAEMARGEVKLSLEPIWNRELVKLDDP 205
>T5AT_TAXCH (Q8S9G6) Taxadien-5-alpha-ol O-acetyltransferase (EC 2.3.1.162)| (Taxa-4(20),11(12)-dien-5alpha-ol-O-acetyltransferase) (Taxadienol acetyltransferase) Length = 439 Score = 40.8 bits (94), Expect = 0.003 Identities = 39/137 (28%), Positives = 62/137 (45%), Gaps = 7/137 (5%) Frame = +3 Query: 126 LPSFLNYFYPMAGRIAVNPSSGMPELHCFNQGTELIVGDAGVELWTL-DWGLSEESLKRI 302 L L Y+ P AGR+ +G E+ C +G + A EL L D+ S S +++ Sbjct: 70 LAKILVYYPPFAGRLR-ETENGDLEVECTGEGAMFLEAMADNELSVLGDFDDSNPSFQQL 128 Query: 303 --QLPYAA---EVPLSV-QLVSFTCGGFAVVWATNNLIGDGNVGIMLVRMWSELVRSGTI 464 LP ++PL V Q+ FTCGGF V + ++ + DG ++ +E+ R Sbjct: 129 LFSLPLDTNFKDLPLLVVQVTRFTCGGFVVGVSFHHGVCDGRGAAQFLKGLAEMARGEVK 188 Query: 465 SEGGPSHDRSLFSPREP 515 P +R L +P Sbjct: 189 LSLEPIWNRELVKLDDP 205
>SALAT_PAPSO (Q94FT4) Salutaridinol 7-O-acetyltransferase (EC 2.3.1.150) (salAT)| Length = 474 Score = 33.5 bits (75), Expect = 0.41 Identities = 43/149 (28%), Positives = 60/149 (40%), Gaps = 20/149 (13%) Frame = +3 Query: 126 LPSFLNYFYPMAGRIAVNPSSGMPELHCFNQGTEL----IVGDAGVELWTLDWGLSEESL 293 L L +FYPMAGR+ N + C +QG I G + D LS+ Sbjct: 75 LSKTLVHFYPMAGRMIDNIL-----VDCHDQGINFYKVKIRGKMCEFMSQPDVPLSQLLP 129 Query: 294 KRIQLPYAAEVP----LSVQLVSFTCGGFAVVWATNNLIGDGNVGIMLVRMWSELVRSGT 461 + +A VP + VQ+ F CGG A+ + ++ I D +R W+ + T Sbjct: 130 SEV---VSASVPKEALVIVQVNMFDCGGTAICSSVSHKIADAATMSTFIRSWASTTK--T 184 Query: 462 ISEGG-----------PSHD-RSLFSPRE 512 GG PS D SLF P E Sbjct: 185 SRSGGSTAAVTDQKLIPSFDSASLFPPSE 213
>ATS4_MOUSE (Q8BNJ2) ADAMTS-4 precursor (EC 3.4.24.82) (A disintegrin and| metalloproteinase with thrombospondin motifs 4) (ADAM-TS 4) (ADAM-TS4) (Aggrecanase 1) Length = 833 Score = 33.5 bits (75), Expect = 0.41 Identities = 28/112 (25%), Positives = 46/112 (41%), Gaps = 4/112 (3%) Frame = -1 Query: 544 MPSNDGSYCGGS----RGLNSDRSWLGPPSEMVPDRTSSDHILTSMIPTFPSPIRLLVAH 377 +P N G YC G R N++ G ++ ++ + T + +FP P+ + + Sbjct: 547 VPRNGGKYCEGRRTRFRSCNTENCPHGSALTFREEQCAAYNHRTDLFKSFPGPMDWVPRY 606 Query: 376 TTAKPPQVKDTSCTESGTSAAYGSWILLSDSSDRPQSRVHSSTPASPTMSSV 221 T P C + + A G + +L + RV TP SP SSV Sbjct: 607 TGVAPRD----QCKLTCQARALGYYYVL-------EPRVADGTPCSPDTSSV 647
>ATS4_HUMAN (O75173) ADAMTS-4 precursor (EC 3.4.24.82) (A disintegrin and| metalloproteinase with thrombospondin motifs 4) (ADAM-TS 4) (ADAM-TS4) (Aggrecanase 1) (ADMP-1) Length = 837 Score = 33.5 bits (75), Expect = 0.41 Identities = 28/112 (25%), Positives = 46/112 (41%), Gaps = 4/112 (3%) Frame = -1 Query: 544 MPSNDGSYCGGS----RGLNSDRSWLGPPSEMVPDRTSSDHILTSMIPTFPSPIRLLVAH 377 +P N G YC G R N++ G ++ ++ + T + +FP P+ + + Sbjct: 551 VPRNGGKYCEGRRTRFRSCNTEDCPTGSALTFREEQCAAYNHRTDLFKSFPGPMDWVPRY 610 Query: 376 TTAKPPQVKDTSCTESGTSAAYGSWILLSDSSDRPQSRVHSSTPASPTMSSV 221 T P C + + A G + +L + RV TP SP SSV Sbjct: 611 TGVAP----QDQCKLTCQARALGYYYVL-------EPRVVDGTPCSPDSSSV 651
>VGP3_EBV (P03200) Envelope glycoprotein GP340/GP220 (Membrane antigen) (MA)| Length = 907 Score = 33.1 bits (74), Expect = 0.53 Identities = 32/110 (29%), Positives = 41/110 (37%), Gaps = 3/110 (2%) Frame = -1 Query: 550 VNMPSNDGSYCGGSRGLNSDRSWLGPPSEMVPDRTSSDHILTSMIPTFPSPIRLLVAHT- 374 V P+ G+ G S S W PD TSS +T+ P SP + T Sbjct: 473 VTSPTPAGTTSGASPVTPSPSPWDNGTESKAPDMTSSTSPVTTPTPNATSPTPAVTTPTP 532 Query: 373 TAKPPQVKDTSCTESGTSAAYGSWILLSDSSDRPQSRVHSSTP--ASPTM 230 A P T+ T + TS G P S V + TP SPT+ Sbjct: 533 NATSPTPAVTTPTPNATSPTLG--------KTSPTSAVTTPTPNATSPTL 574
>PO121_HUMAN (Q9Y2N3) Nuclear envelope pore membrane protein POM 121 (Pore| membrane protein of 121 kDa) (P145) Length = 1229 Score = 32.3 bits (72), Expect = 0.90 Identities = 31/114 (27%), Positives = 51/114 (44%), Gaps = 2/114 (1%) Frame = -1 Query: 487 SWLGPPSEM-VPDRTSSDHILTSMIPTFPSPIRL-LVAHTTAKPPQVKDTSCTESGTSAA 314 S +GPP+ + +P + PT +P+ L + T+A P + T+S + A Sbjct: 753 SSMGPPASVPLPAPFFKQTTTPATAPTTTAPLFTGLASATSAVAPITSASPSTDSASKPA 812 Query: 313 YGSWILLSDSSDRPQSRVHSSTPASPTMSSVPWLKQWSSGMPELGLTAMRPAMG 152 +G I SS S+T ++ T +S P+L G P+ + PAMG Sbjct: 813 FGFGINSVSSSSV------STTTSTATAASQPFL----FGAPQASAASFTPAMG 856
>ATS4_RAT (Q9ESP7) ADAMTS-4 precursor (EC 3.4.24.82) (A disintegrin and| metalloproteinase with thrombospondin motifs 4) (ADAM-TS 4) (ADAM-TS4) (Aggrecanase 1) (Fragment) Length = 630 Score = 32.3 bits (72), Expect = 0.90 Identities = 28/112 (25%), Positives = 45/112 (40%), Gaps = 4/112 (3%) Frame = -1 Query: 544 MPSNDGSYCGGS----RGLNSDRSWLGPPSEMVPDRTSSDHILTSMIPTFPSPIRLLVAH 377 +P N G YC G R N+ G ++ ++ + T + +FP P+ + + Sbjct: 344 VPRNGGKYCEGRRTPFRSCNTKNCPHGSALTFREEQCAAYNHRTDLFKSFPGPMDWVPRY 403 Query: 376 TTAKPPQVKDTSCTESGTSAAYGSWILLSDSSDRPQSRVHSSTPASPTMSSV 221 T P C + + A G + +L + RV TP SP SSV Sbjct: 404 TGVAPRD----QCKLTCQARALGYYYVL-------EPRVADGTPCSPDSSSV 444
>YA9A_SCHPO (Q09788) Hypothetical serine-rich protein C13G6.10c precursor| Length = 530 Score = 32.0 bits (71), Expect = 1.2 Identities = 34/112 (30%), Positives = 44/112 (39%), Gaps = 10/112 (8%) Frame = -1 Query: 526 SYCGGSRGLNSDRSWLGPPSEMVPDRTS-SDHILTSMIPTFPSPIRLLVAHTTAKPPQVK 350 SY S S S++ P S V + S TS +PT S I L +A Sbjct: 182 SYPASSEVATSTSSYVAPVSSSVASSSEISAGSATSYVPTSSSSIALSSVVASASVSAAN 241 Query: 349 DTSCTESGTSAAYGSWILLSD---------SSDRPQSRVHSSTPASPTMSSV 221 T + +SAA S ++S +S S SS ASPT SSV Sbjct: 242 KGVSTPAVSSAAASSSAVVSSVVSSATSVAASSTISSATSSSASASPTSSSV 293
>MN1_HUMAN (Q10571) Probable tumor suppressor protein MN1| Length = 1319 Score = 31.6 bits (70), Expect = 1.5 Identities = 26/77 (33%), Positives = 37/77 (48%) Frame = -1 Query: 382 AHTTAKPPQVKDTSCTESGTSAAYGSWILLSDSSDRPQSRVHSSTPASPTMSSVPWLKQW 203 A + + P V + + E TS Y + +S SSD PQ+ V +S SP ++ P L Sbjct: 1031 AKSDSSSPNVGEFASDEVSTS--YANEDEVSSSSDNPQALVKAS--RSPLVTGSPKLPPR 1086 Query: 202 SSGMPELGLTAMRPAMG 152 G E G A PA+G Sbjct: 1087 GVGAGEHGPKAPPPALG 1103
>IMA3_CAEEL (Q19969) Importin alpha-3 subunit (Karyopherin alpha-3 subunit)| Length = 514 Score = 31.6 bits (70), Expect = 1.5 Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 4/73 (5%) Frame = +3 Query: 201 LHCFNQGTELIVGDAGVELWTLDWGLSEESLKRIQLPYAAEVPLSVQLVSFTCGGFAV-- 374 + C + + +A L + G SE++ + A VPL +QL+S CG V Sbjct: 114 VQCLSSTDPNLQFEAAWALTNIASGTSEQTQAVVN---AGAVPLFLQLLS--CGNLNVCE 168 Query: 375 --VWATNNLIGDG 407 VWA N+IGDG Sbjct: 169 QSVWALGNIIGDG 181
>HWP1_CANAL (P46593) Hyphal wall protein 1 (Cell elongation protein 2)| Length = 634 Score = 31.6 bits (70), Expect = 1.5 Identities = 26/92 (28%), Positives = 40/92 (43%), Gaps = 8/92 (8%) Frame = -1 Query: 475 PPSEMVPDRTSSDHILTSMIPTFPS------PIRLLVAHTTAKPPQVKDTSCTESGTSAA 314 P + D +I T IP P+ P + TT P TS + S +S++ Sbjct: 158 PQPDQPDDNPPIPNIPTDWIPNIPTDWIPDIPEKPTTPATTPNIPATTTTSESSSSSSSS 217 Query: 313 YGSWILLSDSSDRPQSRVHSSTP--ASPTMSS 224 S + +S P+S V ++TP + PT SS Sbjct: 218 SSSTTPKTSASTTPESSVPATTPNTSVPTTSS 249
>ABAA_EMENI (P20945) Regulatory protein abaA| Length = 796 Score = 31.6 bits (70), Expect = 1.5 Identities = 31/120 (25%), Positives = 44/120 (36%), Gaps = 15/120 (12%) Frame = -1 Query: 496 SDRSW-----LGPPSEMVPDRTSSDHILTSMIPTFPSPIRLLVAHTT-AKPPQVKDTSC- 338 SDRS +GP D S H T ++P P+RL+ ++ + PQ TS Sbjct: 218 SDRSTAQTQPVGPRWRTSMDHLPSSHYGTHATSSYPEPMRLMPPYSADLQLPQYSPTSTQ 277 Query: 337 --TESGT--SAAYGSWILLSDSSDRPQSRVHSSTPASPTMSSVPW----LKQWSSGMPEL 182 T + T ++ W+ + DR H T P LK W P L Sbjct: 278 QDTNNNTIQGLSFDMWVSAPNKPDRIDDAYHLYTRLQGDQRQPPMPLEDLKNWRVSFPHL 337
>DRL38_ARATH (Q9LVT3) Putative disease resistance protein At5g47260| Length = 885 Score = 31.2 bits (69), Expect = 2.0 Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 4/70 (5%) Frame = +3 Query: 240 DAGVELWTLD----WGLSEESLKRIQLPYAAEVPLSVQLVSFTCGGFAVVWATNNLIGDG 407 DA VE+ L W L +E++ L ++P ++V+ TC G + NLIG+ Sbjct: 293 DAKVEITCLSPEEAWDLFQETVGENTLRSHQDIPKLARVVASTCRGLPLAL---NLIGEA 349 Query: 408 NVGIMLVRMW 437 G VR W Sbjct: 350 MSGKRTVREW 359
>NUPL1_DROME (Q9VDV3) Probable nucleoporin Nup58| Length = 546 Score = 30.8 bits (68), Expect = 2.6 Identities = 23/77 (29%), Positives = 32/77 (41%) Frame = -1 Query: 382 AHTTAKPPQVKDTSCTESGTSAAYGSWILLSDSSDRPQSRVHSSTPASPTMSSVPWLKQW 203 A TTA PP + T + AA + L + + P ++TPA +S P Sbjct: 27 ATTTAPPPSFGAATSTPT-FGAAPATTSLFAAPAATPAFGAPAATPAFGAPASTPGFGAT 85 Query: 202 SSGMPELGLTAMRPAMG 152 S+ P G A PA G Sbjct: 86 STAAPAFGTAAATPAFG 102
>LIPG_RAT (P04634) Gastric triacylglycerol lipase precursor (EC 3.1.1.3)| (Gastric lipase) (GL) (Lingual lipase) Length = 395 Score = 30.8 bits (68), Expect = 2.6 Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 3/36 (8%) Frame = +3 Query: 435 WSELVRSGTISE---GGPSHDRSLFSPREPPQYDPS 533 W++LVRSG G PS + ++ + PP+YD S Sbjct: 293 WAQLVRSGKFQAFNWGSPSQNMLHYNQKTPPEYDVS 328
>ATX7_MOUSE (Q8R4I1) Ataxin-7 (Spinocerebellar ataxia type 7 protein homolog)| Length = 867 Score = 30.0 bits (66), Expect = 4.5 Identities = 30/99 (30%), Positives = 45/99 (45%), Gaps = 13/99 (13%) Frame = -1 Query: 475 PPSEMVPDRTSSDHILTSMIPTFPSPIRLLVAHTTAKPPQVKDTSCTESGTSA--AYGSW 302 P S VP RT+S +PT I L A T + PP + ++C + + A+G+ Sbjct: 551 PVSARVPHRTNS-------VPTSQGGISYLAATTVSAPPVLLSSTCISPNSKSVPAHGTT 603 Query: 301 ILLS-------DSSDRPQSR---VHSSTPASPT-MSSVP 218 + D QSR SS P++P+ +SSVP Sbjct: 604 LNAQPAGSGAMDPVCSVQSRQVLASSSPPSTPSGLSSVP 642
>TSCC1_MOUSE (Q8K0G5) Protein TSSC1| Length = 386 Score = 29.3 bits (64), Expect = 7.7 Identities = 14/30 (46%), Positives = 20/30 (66%) Frame = +3 Query: 39 NSAQGSVTCVYPKPPTGDFNSVVAAFDAHL 128 NSAQG+V CV + P GD V++ D+H+ Sbjct: 131 NSAQGNVACVVWE-PMGDGKKVISLADSHI 159
>TIF1A_MOUSE (Q64127) Transcription intermediary factor 1-alpha (TIF1-alpha)| (Tripartite motif protein 24) Length = 1051 Score = 29.3 bits (64), Expect = 7.7 Identities = 25/107 (23%), Positives = 45/107 (42%), Gaps = 5/107 (4%) Frame = -1 Query: 475 PPSEMVPDRTSSDHILTSMIPTFP-----SPIRLLVAHTTAKPPQVKDTSCTESGTSAAY 311 PP ++ + S ++P +P SP + + TT KP ++ + A Sbjct: 512 PPPRLINFQNHSPKPNGPVLPPYPQQLRYSPSQNVPRQTTIKPNPLQMAFLAQQ----AI 567 Query: 310 GSWILLSDSSDRPQSRVHSSTPASPTMSSVPWLKQWSSGMPELGLTA 170 W + S + + SSTP+SPT++S + P + L+A Sbjct: 568 KQWQISSVQAPPTTASSSSSTPSSPTITSAAGYDGKAFSSPMIDLSA 614
>GAG_BAEVM (P03341) Gag polyprotein [Contains: Inner coat protein p12; Core| protein p15; Core shell protein p30; Nucleoprotein p10] Length = 536 Score = 29.3 bits (64), Expect = 7.7 Identities = 22/82 (26%), Positives = 34/82 (41%), Gaps = 1/82 (1%) Frame = -1 Query: 481 LGPPSEMVPDRTSSDHILTSMIPTFP-SPIRLLVAHTTAKPPQVKDTSCTESGTSAAYGS 305 L PP ++PD + D + +P P +P+ + + PP + S T Sbjct: 121 LDPPKPVLPDESQQDLLFQDPLPHPPHNPLLEPPPYNSPSPPVLSPVSPT---------- 170 Query: 304 WILLSDSSDRPQSRVHSSTPAS 239 + S+ P S V SSTP S Sbjct: 171 ----TPSAPTPSSLVSSSTPPS 188
>YLU2_PICAN (P34735) Hypothetical protein in LEU2 3'region (Fragment)| Length = 373 Score = 28.9 bits (63), Expect = 10.0 Identities = 20/53 (37%), Positives = 26/53 (49%), Gaps = 1/53 (1%) Frame = -1 Query: 376 TTAKPPQVKDTSCTESGTSA-AYGSWILLSDSSDRPQSRVHSSTPASPTMSSV 221 +T TS T S +S+ + S S S PQS SST +SPT SS+ Sbjct: 118 STDDATSTSSTSTTSSSSSSLSSSSTSSSSKQSSSPQSSTMSSTDSSPTSSSL 170
>RISB_CHLTR (O84737) 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.9) (DMRL| synthase) (Lumazine synthase) (Riboflavin synthase beta chain) Length = 157 Score = 28.9 bits (63), Expect = 10.0 Identities = 17/52 (32%), Positives = 27/52 (51%) Frame = +3 Query: 243 AGVELWTLDWGLSEESLKRIQLPYAAEVPLSVQLVSFTCGGFAVVWATNNLI 398 AG + D+G SL +++P A E+P +++ + T G F V A LI Sbjct: 32 AGAQETFFDFGGDPSSLTIVRVPGAFEIPCAIKKLLSTSGQFHAVVACGVLI 83
>ATN1_RAT (P54258) Atrophin-1 (Dentatorubral-pallidoluysian atrophy protein)| Length = 1183 Score = 28.9 bits (63), Expect = 10.0 Identities = 29/102 (28%), Positives = 39/102 (38%), Gaps = 2/102 (1%) Frame = -1 Query: 487 SWLGPPSEMVPDRTSSDHILTSMIPTFPSPIRLLVAHTTAKPPQVKDTSCTESGTSAAYG 308 S L P E P S H L + P P + +++ V +S + + TS Sbjct: 341 SGLPPGPEKGPTLAPSPHPLPPASSSAPGP-PMRYPYSSCSSSSVAASSSSSAATSQYPA 399 Query: 307 SWILLS--DSSDRPQSRVHSSTPASPTMSSVPWLKQWSSGMP 188 S L S S P S S+ P T S+P WS G P Sbjct: 400 SQTLPSYPHSFPPPTSMSVSNQPPKYTQPSLPSQAVWSQGPP 441 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 69,296,218 Number of Sequences: 219361 Number of extensions: 1399592 Number of successful extensions: 4896 Number of sequences better than 10.0: 29 Number of HSP's better than 10.0 without gapping: 4681 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4883 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4430660157 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)