>LAMB3_MOUSE (Q61087) Laminin beta-3 chain precursor (Laminin 5 beta 3) (Kalinin|
           B1 chain)
          Length = 1168

 Score = 33.5 bits (75), Expect = 0.24
 Identities = 19/60 (31%), Positives = 26/60 (43%)
 Frame = +1

Query: 73  TTLRFSSQPTSPLPFRRATPAGALAAPGMTRRCSHCSYNGHNSRTCPNRGVKIFGVRLTD 252
           T LR +    +P+P R + P  A  A    R    C  +GH  R  PN G     VR+ +
Sbjct: 215 TNLRVNFTKLAPVPQRGSYPPSAYFAVSQLRLQGSCFCHGHADRCAPNPGGSTTAVRVNN 274

>LMO6_HUMAN (O43900) LIM domain only protein 6 (Triple LIM domain protein 6)|
          Length = 615

 Score = 27.7 bits (60), Expect(2) = 1.0
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = +1

Query: 91  SQPTSPLPFRRATPAGALAAPGMTRRCSHCSYNGHNSRT 207
           S+PT+P P RR+  AG + AP      S  +  G +  T
Sbjct: 370 SEPTAPGPSRRSWSAGPVTAPLAASTASFSAVKGASETT 408



 Score = 22.3 bits (46), Expect(2) = 1.0
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +3

Query: 210 PQPRGQDLRGAPHRWIHPQ 266
           P+   + LRGAPHR   P+
Sbjct: 422 PEEPSRFLRGAPHRHSMPE 440

>PPZ_SCHPO (P78968) Serine/threonine-protein phosphatase PP-Z (EC 3.1.3.16)|
          Length = 515

 Score = 31.2 bits (69), Expect = 1.2
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = +1

Query: 25  LLSSPLRCSHHHHHTATTLRFSSQPTSPLPFRRATPAGA 141
           +LS     S HHHH +++  ++  PTSP     + P G+
Sbjct: 110 MLSPSTAASQHHHHHSSSSSYAVSPTSPTSPTSSGPIGS 148

>HFW1_DROME (Q9W568) Protein halfway precursor (Protein singed wings)|
          Length = 611

 Score = 31.2 bits (69), Expect = 1.2
 Identities = 12/30 (40%), Positives = 14/30 (46%)
 Frame = +3

Query: 189 RPQLADVPQPRGQDLRGAPHRWIHPQERQH 278
           RP++A  P P        PH   HPQ R H
Sbjct: 23  RPEIAHTPDPAALGEESTPHAHAHPQARHH 52

>BTBDA_MOUSE (Q80X66) BTB/POZ domain-containing protein 10|
          Length = 475

 Score = 30.8 bits (68), Expect = 1.6
 Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
 Frame = +1

Query: 28  LSSPLRCSHHHHHTATTLRFSSQPTSPLPFRRATPAGALAAPG-MTRRCSHCSYNGHNSR 204
           ++SP R    HH        SS+P+SP P +RA+P G++++ G  +R  S  S +G    
Sbjct: 90  VTSPTR---QHHIEREKDHSSSRPSSPRP-QRASPNGSMSSAGNSSRNSSQSSSDG---- 141

Query: 205 TCPNRGVKIF 234
           +C   G  +F
Sbjct: 142 SCKTSGEMVF 151

>CHD8_HUMAN (Q9HCK8) Chromodomain-helicase-DNA-binding protein 8 (EC 3.6.1.-)|
            (ATP-dependent helicase CHD8) (CHD-8) (Helicase with SNF2
            domain 1)
          Length = 2302

 Score = 26.9 bits (58), Expect(2) = 1.9
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +1

Query: 52   HHHHHTATTLRFSSQPTSPL 111
            HHHHH    LR    P+SP+
Sbjct: 2223 HHHHHHHPGLRAPGYPSSPV 2242



 Score = 21.9 bits (45), Expect(2) = 1.9
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = +1

Query: 19   NPLLSSPLRCSHHHHH 66
            +P + S     HHHHH
Sbjct: 2204 SPHVDSSTMLHHHHHH 2219

>LAMA1_HUMAN (P25391) Laminin alpha-1 chain precursor (Laminin A chain)|
          Length = 3075

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
 Frame = +1

Query: 76   TLRFSSQPTSPLPFRRATPAGALAAPG-MTRRCSHCSYNGHNSRTCPNRG 222
            T+ FS Q  +P   R   PAG+   P  +   C  CS N H+    PN G
Sbjct: 1368 TVGFSCQDCAPGYHRGKLPAGSDRGPRPLVAPCVPCSCNNHSDTCDPNTG 1417

>IE63_MCMVS (Q69154) Transcriptional regulator IE63 homolog (Protein UL69)|
          Length = 841

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 20/64 (31%), Positives = 28/64 (43%), Gaps = 2/64 (3%)
 Frame = +1

Query: 31  SSPLRCSHHHHHTATTLRFSSQPTSPLPFRRATPA--GALAAPGMTRRCSHCSYNGHNSR 204
           SS    +HH HHT      S+  +S    RR + A  G  +  G  R  +    NGH+S 
Sbjct: 508 SSSTSSNHHRHHTRRARTRSTHDSSSSGSRRRSSATDGRRSRRGSRRGEAQRESNGHHSS 567

Query: 205 TCPN 216
             P+
Sbjct: 568 KSPS 571

>COFA1_HUMAN (P39059) Collagen alpha-1(XV) chain precursor [Contains: Endostatin|
           (Endostatin-XV) (Restin) (Related to endostatin)]
          Length = 1388

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 9/53 (16%)
 Frame = +3

Query: 147 GSGDDEAVLALQLQRPQL------ADVPQPRGQDL---RGAPHRWIHPQERQH 278
           G GD+E + A   + P +      +  P P G  L     AP RWI P +R+H
Sbjct: 502 GPGDEEDLAAATTEEPLITAGGEESGSPPPDGPPLPLPTVAPERWITPAQREH 554

>ZCH12_MOUSE (Q9CZA5) Zinc finger CCHC domain-containing protein 12|
           (Smad-interacting zinc finger protein)
          Length = 402

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 11/23 (47%), Positives = 12/23 (52%)
 Frame = +1

Query: 160 TRRCSHCSYNGHNSRTCPNRGVK 228
           T  CSHC   GH+  TC N   K
Sbjct: 345 TIHCSHCGEEGHSKETCDNESDK 367

>MPA5A_LOLPR (Q40240) Major pollen allergen Lol p 5a precursor (Lol p Va) (Lol p|
           Ib)
          Length = 308

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 23/82 (28%), Positives = 34/82 (41%), Gaps = 12/82 (14%)
 Frame = +1

Query: 22  PLLSSPLRCSHHHHHTATTLRFSSQPTSPLPFRRATPAGALAAPGMTRRC---------- 171
           P L +PLR          T   SS+P SP P R ++P  A  APG+  +           
Sbjct: 73  PPLPTPLR---------RTSSRSSRPPSPSPPRASSPTSAAKAPGLIPKLDTAYDVAYKA 123

Query: 172 --SHCSYNGHNSRTCPNRGVKI 231
             +H        R CP+R +++
Sbjct: 124 AEAHPRGQVRRLRHCPHRSLRV 145

>LE756_CAEEL (Q11184) Protein let-756 (Lethal protein 756)|
          Length = 425

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = +1

Query: 7   YWTVNPLLSSPLRCSHHHHHTATTLRFSSQP 99
           YW  +P+  +P   SHHHHH    +  SS P
Sbjct: 367 YWQ-SPVTQAPHHNSHHHHHHHPRVSSSSDP 396

>AROA_SYNEL (Q8DLY3) 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19)|
           (5-enolpyruvylshikimate-3-phosphate synthase) (EPSP
           synthase) (EPSPS)
          Length = 440

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 22/82 (26%), Positives = 30/82 (36%), Gaps = 4/82 (4%)
 Frame = +1

Query: 16  VNPLLSSPLRCSHHHHHTATTLRFSSQPTSPL----PFRRATPAGALAAPGMTRRCSHCS 183
           V PLL    +     HH+   L    QP  P+    P   A    AL    +    +   
Sbjct: 139 VTPLLQMGAQIWGRQHHSRAPLAILGQPLEPITYYSPIASAQVKSALLLAALHTEGTTLI 198

Query: 184 YNGHNSRTCPNRGVKIFGVRLT 249
              H SR    R ++ FG RL+
Sbjct: 199 REPHRSRDHSERMLQAFGARLS 220

>BTBDA_PONPY (Q5R585) BTB/POZ domain-containing protein 10|
          Length = 475

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
 Frame = +1

Query: 28  LSSPLRCSHHHHHTATTLRFSSQPTSPLPFRRATPAGALAAPG-MTRRCSHCSYNGHNSR 204
           ++SP R    HH        SS+P+SP P ++A+P G++++ G  +R  S  S +G    
Sbjct: 90  VTSPTR---QHHVEREKDHSSSRPSSPRP-QKASPNGSISSAGNSSRNSSQSSSDG---- 141

Query: 205 TCPNRGVKIF 234
           +C   G  +F
Sbjct: 142 SCKTAGEMVF 151

>BTBDA_HUMAN (Q9BSF8) BTB/POZ domain-containing protein 10|
          Length = 475

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
 Frame = +1

Query: 28  LSSPLRCSHHHHHTATTLRFSSQPTSPLPFRRATPAGALAAPG-MTRRCSHCSYNGHNSR 204
           ++SP R    HH        SS+P+SP P ++A+P G++++ G  +R  S  S +G    
Sbjct: 90  VTSPTR---QHHVEREKDHSSSRPSSPRP-QKASPNGSISSAGNSSRNSSQSSSDG---- 141

Query: 205 TCPNRGVKIF 234
           +C   G  +F
Sbjct: 142 SCKTAGEMVF 151

>ZCH12_HUMAN (Q6PEW1) Zinc finger CCHC domain-containing protein 12|
          Length = 402

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = +1

Query: 160 TRRCSHCSYNGHNSRTCPNRGVK 228
           T RCS+C   GH+  TC N   K
Sbjct: 344 TIRCSYCGEEGHSKETCDNESDK 366

>ZCH12_RAT (Q5HZA3) Zinc finger CCHC domain-containing protein 12|
          Length = 401

 Score = 29.3 bits (64), Expect = 4.5
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = +1

Query: 160 TRRCSHCSYNGHNSRTCPN 216
           T  CSHC   GH+  TC N
Sbjct: 344 TVHCSHCGEEGHSKETCDN 362

>PGMP_SOLTU (Q9M4G5) Phosphoglucomutase, chloroplast precursor (EC 5.4.2.2)|
           (Glucose phosphomutase) (PGM)
          Length = 632

 Score = 29.3 bits (64), Expect = 4.5
 Identities = 13/37 (35%), Positives = 18/37 (48%)
 Frame = +1

Query: 22  PLLSSPLRCSHHHHHTATTLRFSSQPTSPLPFRRATP 132
           P L S +  SHHHH + + L F    +    FR  +P
Sbjct: 15  PSLCSGISSSHHHHRSLSFLNFPKLSSFKYSFRTISP 51

>SSBP4_HUMAN (Q9BWG4) Single-stranded DNA-binding protein 4|
          Length = 385

 Score = 29.3 bits (64), Expect = 4.5
 Identities = 21/63 (33%), Positives = 27/63 (42%)
 Frame = +1

Query: 76  TLRFSSQPTSPLPFRRATPAGALAAPGMTRRCSHCSYNGHNSRTCPNRGVKIFGVRLTDG 255
           TLR  SQP + LP  +    GA+      R   H S  G   R  P RG+   G +   G
Sbjct: 159 TLRMPSQPPAGLPGSQPLLPGAMEP--SPRAQGHPSMGGPMQRVTPPRGMASVGPQSYGG 216

Query: 256 SIR 264
            +R
Sbjct: 217 GMR 219

>AIR1_YEAST (P40507) Protein AIR1 (Arginine methyltransferase-interacting RING|
           finger protein 1)
          Length = 360

 Score = 29.3 bits (64), Expect = 4.5
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = +1

Query: 169 CSHCSYNGHNSRTCPNRGVKIF 234
           C++C+ NGH    CP++  K+F
Sbjct: 114 CTNCNANGHYKSQCPHKWKKVF 135

>BIK1_YEAST (P11709) Nuclear fusion protein BIK1|
          Length = 440

 Score = 29.3 bits (64), Expect = 4.5
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = +1

Query: 130 PAGALAAPGMTRRCSHCSYNGHNSRTCPN 216
           PA      G  + C HC   GHN+  CP+
Sbjct: 403 PAPVDTTAGRQQWCEHCDTMGHNTAECPH 431

>FOXL2_HUMAN (P58012) Forkhead box protein L2|
          Length = 376

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 19/58 (32%), Positives = 24/58 (41%), Gaps = 8/58 (13%)
 Frame = +1

Query: 58  HHHTATTLRFSSQPTSPLPFRRATPAGALAAPGMTRRCS--------HCSYNGHNSRT 207
           HH  A        P SP       PA   +APG+   C+        HCSY  H+S+T
Sbjct: 311 HHGAAAPPPGQLSPASPATAAPPAPAPT-SAPGLQFACARQPELAMMHCSYWDHDSKT 367

>IPF1_MOUSE (P52946) Insulin promoter factor 1 (IPF-1) (Islet/duodenum homeobox|
           1) (IDX-1) (Somatostatin-transactivating factor 1)
           (STF-1) (Pancreas/duodenum homeobox 1)
          Length = 284

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 17/48 (35%), Positives = 20/48 (41%)
 Frame = +1

Query: 10  WTVNPLLSSPLRCSHHHHHTATTLRFSSQPTSPLPFRRATPAGALAAP 153
           + V PL S     +H HHH    L  +  P  P PF   T  G L  P
Sbjct: 68  YEVPPLASDDPAGAHLHHHLPAQLGLAHPP--PGPFPNGTEPGGLEEP 113

>HEXP_LEIMA (Q04832) DNA-binding protein HEXBP (Hexamer-binding protein)|
          Length = 271

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +1

Query: 163 RRCSHCSYNGHNSRTCPNRG 222
           R+C  C  +GH SR CP+ G
Sbjct: 196 RKCYKCGESGHMSRECPSAG 215

>FOXL2_MOUSE (O88470) Forkhead box protein L2 (Pituitary forkhead factor)|
           (P-Frk)
          Length = 375

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 19/58 (32%), Positives = 24/58 (41%), Gaps = 8/58 (13%)
 Frame = +1

Query: 58  HHHTATTLRFSSQPTSPLPFRRATPAGALAAPGMTRRCS--------HCSYNGHNSRT 207
           HH  A        P SP       PA   +APG+   C+        HCSY  H+S+T
Sbjct: 310 HHGAAAPPPGQLSPASPATAAPPAPAPT-SAPGLQFACARQPELAMMHCSYWDHDSKT 366

>TOP3A_DROME (Q9NG98) DNA topoisomerase 3-alpha (EC 5.99.1.2) (DNA topoisomerase|
            III alpha)
          Length = 1250

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 12/36 (33%), Positives = 15/36 (41%)
 Frame = +1

Query: 112  PFRRATPAGALAAPGMTRRCSHCSYNGHNSRTCPNR 219
            P  R+ P    +    TRRC  C   GH    CP +
Sbjct: 1210 PPGRSQPTAITSDGPKTRRCGLCRKEGHTRNKCPRK 1245

>ZCHC7_HUMAN (Q8N3Z6) Zinc finger CCHC domain-containing protein 7|
          Length = 542

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 20/65 (30%), Positives = 25/65 (38%), Gaps = 4/65 (6%)
 Frame = +1

Query: 43  RCSHHHHHTATTLRFSSQ---PTSPLPFRRA-TPAGALAAPGMTRRCSHCSYNGHNSRTC 210
           RC    H+T        Q    T P P ++  TP+     P     C HC+  GH    C
Sbjct: 307 RCHMLGHYTDACTEIWRQYHLTTKPGPPKKPKTPS----RPSALAYCYHCAQKGHYGHEC 362

Query: 211 PNRGV 225
           P R V
Sbjct: 363 PEREV 367

>RW1_MOUSE (O70472) RW1 protein|
          Length = 1829

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = +1

Query: 49   SHHHHHTATTLRFSSQPTSPLPFRRATPAGALAAPGMT 162
            S HH H+ + L   SQP  P+P  +  P   L+   +T
Sbjct: 1238 SQHHSHSHSPLEQHSQPPPPVPQHQEPPPERLSPAPLT 1275


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 44,914,461
Number of Sequences: 219361
Number of extensions: 687245
Number of successful extensions: 3258
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 2845
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3187
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2618960580
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)