ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart44b10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|Y17386.1|TAE17386 Triticum aestivum mRNA for putative In2.1-... 775 0.0
2ref|XM_493845.1| Oryza sativa (japonica cultivar-group), mRNA 295 8e-77
3gb|AF237487.2|AF237487 Oryza sativa XIG mRNA, complete cds 295 8e-77
4emb|X58573.1|ZMIN21 Maize In2-1 mRNA 254 3e-64
5ref|XM_493844.1| Oryza sativa (japonica cultivar-group), mRNA 96 1e-16
6dbj|AK065887.1| Oryza sativa (japonica cultivar-group) cDNA clon... 96 1e-16
7dbj|AK061849.1| Oryza sativa (japonica cultivar-group) cDNA clon... 96 1e-16
8gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 82 2e-12
9gb|AC084405.6| Oryza sativa chromosome 3 BAC OSJNBa0044H10 genom... 82 2e-12
10dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 82 2e-12
11gb|AY111952.1| Zea mays CL5438_1 mRNA sequence 80 9e-12
12ref|XM_493843.1| Oryza sativa (japonica cultivar-group), mRNA 52 0.002
13gb|AY664419.1| Zea mays cultivar Mo17 locus 9009, complete sequence 46 0.12
14gb|AY664415.1| Zea mays cultivar B73 locus 9009, complete sequence 46 0.12
15gb|AC172870.1| Brassica rapa subsp. pekinensis clone KBrH004A06,... 46 0.12
16gb|AY332468.1| Oryza sativa (japonica cultivar-group) glutathion... 44 0.49
17gb|AF249913.1|AF249913 Glycine max In2-1 protein mRNA, complete cds 44 0.49
18gb|AC124228.16| Mus musculus chromosome 5, clone RP23-345O14, co... 42 1.9
19gb|AC132102.3| Mus musculus BAC clone RP24-360K9 from chromosome... 42 1.9
20emb|BX571857.1| Staphylococcus aureus strain MSSA476, complete g... 42 1.9
21dbj|AP007150.1| Aspergillus oryzae RIB40 genomic DNA, SC009 42 1.9
22dbj|BA000017.4| Staphylococcus aureus subsp. aureus Mu50 DNA, co... 42 1.9
23gb|CP000046.1| Staphylococcus aureus subsp. aureus COL, complete... 42 1.9
24gb|DP000035.1| Oryctolagus cuniculus target 116 genomic scaffold 42 1.9
25gb|CP000253.1| Staphylococcus aureus subsp. aureus NCTC 8325, co... 42 1.9
26gb|CP000255.1| Staphylococcus aureus subsp. aureus USA300, compl... 42 1.9
27dbj|BA000033.2| Staphylococcus aureus subsp. aureus MW2 DNA, com... 42 1.9
28dbj|BA000018.3| Staphylococcus aureus subsp. aureus N315 genomic... 42 1.9
29gb|AE005674.1| Shigella flexneri 2a str. 301, complete genome 40 7.6
30ref|XM_507653.1| PREDICTED: Pan troglodytes similar to CUGBP2 pr... 40 7.6
31ref|NM_001025077.1| Homo sapiens CUG triplet repeat, RNA binding... 40 7.6
32ref|NM_001025076.1| Homo sapiens CUG triplet repeat, RNA binding... 40 7.6
33ref|NM_006561.2| Homo sapiens CUG triplet repeat, RNA binding pr... 40 7.6
34ref|XM_593586.2| PREDICTED: Bos taurus similar to regulatory sol... 40 7.6
35ref|XM_951164.1| Neurospora crassa OR74A hypothetical protein ( ... 40 7.6
36ref|XM_327992.1| Neurospora crassa OR74A hypothetical protein ( ... 40 7.6
37ref|XM_533812.2| PREDICTED: Canis familiaris similar to Vpr-bind... 40 7.6
38ref|XM_845017.1| PREDICTED: Canis familiaris similar to Vpr-bind... 40 7.6
39gb|AC026887.9| Homo sapiens chromosome 10 clone RP11-544P1, comp... 40 7.6
40gb|U00096.2| Escherichia coli K-12 MG1655, complete genome 40 7.6
41emb|X00786.1|ECPROAB E. coli genes proA and proB for GPR and fo... 40 7.6
42emb|CR861433.1| Pongo pygmaeus mRNA; cDNA DKFZp459J202 (from clo... 40 7.6
43emb|CR861202.1| Pongo pygmaeus mRNA; cDNA DKFZp459F043 (from clo... 40 7.6
44emb|CR860449.1| Pongo pygmaeus mRNA; cDNA DKFZp459A171 (from clo... 40 7.6
45emb|CR859609.1| Pongo pygmaeus mRNA; cDNA DKFZp459C204 (from clo... 40 7.6
46emb|CR859087.1| Pongo pygmaeus mRNA; cDNA DKFZp459F0628 (from cl... 40 7.6
47gb|BC036391.1| Homo sapiens CUG triplet repeat, RNA binding prot... 40 7.6
48emb|AL451012.1|NCB21O8 Neurospora crassa DNA linkage group II BA... 40 7.6
49dbj|AP009048.1| Escherichia coli W3110 DNA, complete genome 40 7.6
50gb|AC090434.43| Chlamydomonas reinhardtii clone cr-1j6, complete... 40 7.6
51ref|XM_695749.1| PREDICTED: Danio rerio similar to alpha-2-macro... 40 7.6
52gb|AF432906.1|AF432906 Homo sapiens neuroblastoma apoptosis-rela... 40 7.6
53gb|AF295067.1|AF314199S6 Homo sapiens neuroplastoma apoptosis-re... 40 7.6
54gb|U69546.1|HSU69546 Homo sapiens RNA-binding protein BRUNOL3 (B... 40 7.6
55gb|AE014073.1| Shigella flexneri 2a str. 2457T, complete genome 40 7.6
56emb|AJ340530.1|HSA340530 Homo sapiens genomic sequence surroundi... 40 7.6
57gb|AF036956.1|AF036956 Homo sapiens neuroblastoma apoptosis-rela... 40 7.6
58gb|AF090693.1|AF090693 Homo sapiens apoptosis-related RNA bindin... 40 7.6
59gb|AF090694.1|AF090694 Homo sapiens apoptosis-related RNA bindin... 40 7.6
60emb|AL355097.5|CNS05TCG Human chromosome 14 DNA sequence BAC R-2... 40 7.6
61gb|AE005174.2| Escherichia coli O157:H7 EDL933, complete genome 40 7.6
62dbj|BA000007.2| Escherichia coli O157:H7 DNA, complete genome 40 7.6
63gb|U70214.1|ECU70214 Escherichia coli chromosome minutes 4-6 40 7.6
64emb|AL731830.7| Mouse DNA sequence from clone RP23-162F19 on chr... 40 7.6
65gb|CP000038.1| Shigella sonnei Ss046, complete genome 40 7.6 
>emb|Y17386.1|TAE17386 Triticum aestivum mRNA for putative In2.1-like protein
          Length = 1031

 Score =  775 bits (391), Expect = 0.0
 Identities = 467/491 (95%), Gaps = 1/491 (0%)
 Strand = Plus / Plus

                                                                       
Query: 73  tcgcaatggccgcagctgcagcaccagccaggcccacgaaagaagcgctcccgcctgcac 132
           |||||||||||||||||||||||  ||| ||  |||||||||||| ||||||||||||||
Sbjct: 31  tcgcaatggccgcagctgcagcaatagcaagttccacgaaagaagtgctcccgcctgcac 90

                                                                       
Query: 133 tgggcgccgtctccgagccccctcccctcttcgatggcaccaccagactgtacatttgct 192
           ||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||
Sbjct: 91  tgggcgccgtctccgagccccctcccctctttgatggcaccaccagactgtatatttgct 150

                                                                       
Query: 193 acatctgtccgtttgcccagcgtgcctgggttacccggaactgcaagggtctgcaggacg 252
           ||||||| |||||||| || ||||||||||| |||||||||||||||||||||||||| |
Sbjct: 151 acatctgcccgtttgctcaacgtgcctgggtgacccggaactgcaagggtctgcaggagg 210

                                                                       
Query: 253 agatcaagctggtcgccatcaatctggaggacaaaccagcatggtacaaggagaaggttt 312
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 211 agatcaagctggtcgccatcaatctggaggacaaaccagcatggtacaaggagaaggttt 270

                                                                       
Query: 313 acccacagggcacggtgccttccctggagcacgacggcaaggtcaccggagagagcttgg 372
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 271 acccacagggcacggtgccttccctggagcacgacggcagggtcaccggagagagcttgg 330

                                                                       
Query: 373 atttgatcaagtacatcgacaccaatttccaaggcccggcatttctccctcaagatcctg 432
           ||||||||||||||||||||||||||||||||||||||||| | || ||||||||||| |
Sbjct: 331 atttgatcaagtacatcgacaccaatttccaaggcccggcactgcttcctcaagatccgg 390

                                                                       
Query: 433 ctaagaggcagtttgctgatgagctgattgcttacgctgacgcctttaccagagcactct 492
           ||||||||||||| || |||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 391 ctaagaggcagttcgccgatgagctgattgcttacgctgacgcctttaccaaagcactct 450

                                                                       
Query: 493 actcgcccttgatctcccaagtggccatgtcagacgaagctgttgccgctttagac-aga 551
           |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| |||
Sbjct: 451 actcgcccttgatctcccaagtggccatgtcagacgaagctgttgctgctctagacaaga 510

                      
Query: 552 tcgaagctgcc 562
           |||||||||||
Sbjct: 511 tcgaagctgcc 521
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>ref|XM_493845.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 796

 Score =  295 bits (149), Expect = 8e-77
 Identities = 365/437 (83%)
 Strand = Plus / Plus

                                                                       
Query: 73  tcgcaatggccgcagctgcagcaccagccaggcccacgaaagaagcgctcccgcctgcac 132
           |||| ||||||||||||||||||||    ||  ||  |||||||||||| ||  |||| |
Sbjct: 24  tcgccatggccgcagctgcagcaccgcgtagctccgggaaagaagcgcttcccgctgcgc 83

                                                                       
Query: 133 tgggcgccgtctccgagccccctcccctcttcgatggcaccaccagactgtacatttgct 192
           | ||| ||| ||| |||||||||| ||||||||| ||||||||||| || ||||||||||
Sbjct: 84  tcggctccgcctctgagccccctcgcctcttcgacggcaccaccaggctttacatttgct 143

                                                                       
Query: 193 acatctgtccgtttgcccagcgtgcctgggttacccggaactgcaagggtctgcaggacg 252
           || |||| |||||||| ||||| || ||| ||| | |||||| ||||||  |||||||| 
Sbjct: 144 acttctgcccgtttgctcagcgcgcttggattatcaggaacttcaagggcttgcaggaca 203

                                                                       
Query: 253 agatcaagctggtcgccatcaatctggaggacaaaccagcatggtacaaggagaaggttt 312
           ||||| |||| |||| |||  ||||| ||||||||||||| |||||||| ||||||||||
Sbjct: 204 agatcgagctagtcggcattgatctgcaggacaaaccagcttggtacaaagagaaggttt 263

                                                                       
Query: 313 acccacagggcacggtgccttccctggagcacgacggcaaggtcaccggagagagcttgg 372
           ||  |||||||||||||||||| || |||||| |||||||| |||  || ||||| || |
Sbjct: 264 acgaacagggcacggtgccttctctagagcacaacggcaagatcatgggggagagtttag 323

                                                                       
Query: 373 atttgatcaagtacatcgacaccaatttccaaggcccggcatttctccctcaagatcctg 432
           ||||||||||||||||||||| | ||||| ||||||| ||| | |||||| |||||||||
Sbjct: 324 atttgatcaagtacatcgacagccatttcgaaggccctgcactgctccctgaagatcctg 383

                                                                       
Query: 433 ctaagaggcagtttgctgatgagctgattgcttacgctgacgcctttaccagagcactct 492
             ||||| ||||||||||||||||| ||||| || ||  | || ||||||| ||||||||
Sbjct: 384 agaagagacagtttgctgatgagcttattgcgtatgccaatgcgtttaccaaagcactct 443

                            
Query: 493 actcgcccttgatctcc 509
           |||| ||||| ||||||
Sbjct: 444 actcacccttaatctcc 460
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>gb|AF237487.2|AF237487 Oryza sativa XIG mRNA, complete cds
          Length = 1058

 Score =  295 bits (149), Expect = 8e-77
 Identities = 365/437 (83%)
 Strand = Plus / Plus

                                                                       
Query: 73  tcgcaatggccgcagctgcagcaccagccaggcccacgaaagaagcgctcccgcctgcac 132
           |||| ||||||||||||||||||||    ||  ||  |||||||||||| ||  |||| |
Sbjct: 25  tcgccatggccgcagctgcagcaccgcgtagctccgggaaagaagcgcttcccgctgcgc 84

                                                                       
Query: 133 tgggcgccgtctccgagccccctcccctcttcgatggcaccaccagactgtacatttgct 192
           | ||| ||| ||| |||||||||| ||||||||| ||||||||||| || ||||||||||
Sbjct: 85  tcggctccgcctctgagccccctcgcctcttcgacggcaccaccaggctttacatttgct 144

                                                                       
Query: 193 acatctgtccgtttgcccagcgtgcctgggttacccggaactgcaagggtctgcaggacg 252
           || |||| |||||||| ||||| || ||| ||| | |||||| ||||||  |||||||| 
Sbjct: 145 acttctgcccgtttgctcagcgcgcttggattatcaggaacttcaagggcttgcaggaca 204

                                                                       
Query: 253 agatcaagctggtcgccatcaatctggaggacaaaccagcatggtacaaggagaaggttt 312
           ||||| |||| |||| |||  ||||| ||||||||||||| |||||||| ||||||||||
Sbjct: 205 agatcgagctagtcggcattgatctgcaggacaaaccagcttggtacaaagagaaggttt 264

                                                                       
Query: 313 acccacagggcacggtgccttccctggagcacgacggcaaggtcaccggagagagcttgg 372
           ||  |||||||||||||||||| || |||||| |||||||| |||  || ||||| || |
Sbjct: 265 acgaacagggcacggtgccttctctagagcacaacggcaagatcatgggggagagtttag 324

                                                                       
Query: 373 atttgatcaagtacatcgacaccaatttccaaggcccggcatttctccctcaagatcctg 432
           ||||||||||||||||||||| | ||||| ||||||| ||| | |||||| |||||||||
Sbjct: 325 atttgatcaagtacatcgacagccatttcgaaggccctgcactgctccctgaagatcctg 384

                                                                       
Query: 433 ctaagaggcagtttgctgatgagctgattgcttacgctgacgcctttaccagagcactct 492
             ||||| ||||||||||||||||| ||||| || ||  | || ||||||| ||||||||
Sbjct: 385 agaagagacagtttgctgatgagcttattgcgtatgccaatgcgtttaccaaagcactct 444

                            
Query: 493 actcgcccttgatctcc 509
           |||| ||||| ||||||
Sbjct: 445 actcacccttaatctcc 461
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>emb|X58573.1|ZMIN21 Maize In2-1 mRNA
          Length = 906

 Score =  254 bits (128), Expect = 3e-64
 Identities = 329/396 (83%)
 Strand = Plus / Plus

                                                                       
Query: 143 ctccgagccccctcccctcttcgatggcaccaccagactgtacatttgctacatctgtcc 202
           |||| |||| |||||| ||||||||||||||||||| |||||||| |||||| |||| ||
Sbjct: 86  ctcccagccacctcccgtcttcgatggcaccaccaggctgtacatctgctacttctgccc 145

                                                                       
Query: 203 gtttgcccagcgtgcctgggttacccggaactgcaagggtctgcaggacgagatcaagct 262
           ||| || ||||| |||||||| ||| ||||||  |||||| |||||||| ||||  ||||
Sbjct: 146 gttcgctcagcgcgcctgggtcaccaggaacttgaagggtttgcaggacaagatggagct 205

                                                                       
Query: 263 ggtcgccatcaatctggaggacaaaccagcatggtacaaggagaaggtttacccacaggg 322
           ||| |||||| ||||| |||||||||| || ||||||||||| ||||||||| |||||||
Sbjct: 206 ggtggccatcgatctgcaggacaaaccggcttggtacaaggacaaggtttacgcacaggg 265

                                                                       
Query: 323 cacggtgccttccctggagcacgacggcaaggtcaccggagagagcttggatttgatcaa 382
           ||||||||||||||||||||||||| || ||||||  || |||||||||||  |||||| 
Sbjct: 266 cacggtgccttccctggagcacgacagcgaggtcaggggcgagagcttggacctgatcag 325

                                                                       
Query: 383 gtacatcgacaccaatttccaaggcccggcatttctccctcaagatcctgctaagaggca 442
           ||||||||||| ||| ||  | ||||| ||  | |||||  | ||| |||| ||||||||
Sbjct: 326 gtacatcgacagcaactttgacggccccgcgctgctcccagaggatgctgcgaagaggca 385

                                                                       
Query: 443 gtttgctgatgagctgattgcttacgctgacgcctttaccagagcactctactcgccctt 502
           ||||||||| || ||| | || |  ||  |||| || |||| ||| ||||||||||| ||
Sbjct: 386 gtttgctgacgaactgttcgcgtctgccaacgcgttcaccaaagccctctactcgccgtt 445

                                               
Query: 503 gatctcccaagtggccatgtcagacgaagctgttgc 538
           | | ||||| | |||| |||||||||||| ||||||
Sbjct: 446 gctgtcccacgcggccgtgtcagacgaagttgttgc 481
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>ref|XM_493844.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1006

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 219/276 (79%)
 Strand = Plus / Plus

                                                                       
Query: 147 gagccccctcccctcttcgatggcaccaccagactgtacatttgctacatctgtccgttt 206
           ||||||||||||||||||||||| ||||||||  ||||| ||   |||  ||| || |  
Sbjct: 73  gagccccctcccctcttcgatggaaccaccaggttgtacgttgcgtaccactgcccttac 132

                                                                       
Query: 207 gcccagcgtgcctgggttacccggaactgcaagggtctgcaggacgagatcaagctggtc 266
           || ||||| || ||| || || |||||| ||||||| |||||||  |||||||| | |||
Sbjct: 133 gcgcagcgcgcgtggattgccaggaactacaagggtttgcaggataagatcaagattgtc 192

                                                                       
Query: 267 gccatcaatctggaggacaaaccagcatggtacaaggagaaggtttacccacagggcacg 326
           || ||  |||| |  ||||  || || |||||||||||||||||||||||| ||  || |
Sbjct: 193 gcgattgatcttgcagacaggcctgcttggtacaaggagaaggtttacccagagaacaag 252

                                                                       
Query: 327 gtgccttccctggagcacgacggcaaggtcaccggagagagcttggatttgatcaagtac 386
           || ||||| || |||||| ||    |||| |  ||||| |||||||||||| ||||||||
Sbjct: 253 gtaccttcacttgagcacaacaatcaggtgaaaggagaaagcttggatttggtcaagtac 312

                                               
Query: 387 atcgacaccaatttccaaggcccggcatttctccct 422
           || |||||||||||| |||| || ||||| ||||||
Sbjct: 313 attgacaccaatttcgaagggccagcattactccct 348
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>dbj|AK065887.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013044J05, full
           insert sequence
          Length = 1252

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 219/276 (79%)
 Strand = Plus / Plus

                                                                       
Query: 147 gagccccctcccctcttcgatggcaccaccagactgtacatttgctacatctgtccgttt 206
           ||||||||||||||||||||||| ||||||||  ||||| ||   |||  ||| || |  
Sbjct: 246 gagccccctcccctcttcgatggaaccaccaggttgtacgttgcgtaccactgcccttac 305

                                                                       
Query: 207 gcccagcgtgcctgggttacccggaactgcaagggtctgcaggacgagatcaagctggtc 266
           || ||||| || ||| || || |||||| ||||||| |||||||  |||||||| | |||
Sbjct: 306 gcgcagcgcgcgtggattgccaggaactacaagggtttgcaggataagatcaagattgtc 365

                                                                       
Query: 267 gccatcaatctggaggacaaaccagcatggtacaaggagaaggtttacccacagggcacg 326
           || ||  |||| |  ||||  || || |||||||||||||||||||||||| ||  || |
Sbjct: 366 gcgattgatcttgcagacaggcctgcttggtacaaggagaaggtttacccagagaacaag 425

                                                                       
Query: 327 gtgccttccctggagcacgacggcaaggtcaccggagagagcttggatttgatcaagtac 386
           || ||||| || |||||| ||    |||| |  ||||| |||||||||||| ||||||||
Sbjct: 426 gtaccttcacttgagcacaacaatcaggtgaaaggagaaagcttggatttggtcaagtac 485

                                               
Query: 387 atcgacaccaatttccaaggcccggcatttctccct 422
           || |||||||||||| |||| || ||||| ||||||
Sbjct: 486 attgacaccaatttcgaagggccagcattactccct 521
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>dbj|AK061849.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-F06, full
           insert sequence
          Length = 1029

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 219/276 (79%)
 Strand = Plus / Plus

                                                                       
Query: 147 gagccccctcccctcttcgatggcaccaccagactgtacatttgctacatctgtccgttt 206
           ||||||||||||||||||||||| ||||||||  ||||| ||   |||  ||| || |  
Sbjct: 122 gagccccctcccctcttcgatggaaccaccaggttgtacgttgcgtaccactgcccttac 181

                                                                       
Query: 207 gcccagcgtgcctgggttacccggaactgcaagggtctgcaggacgagatcaagctggtc 266
           || ||||| || ||| || || |||||| ||||||| |||||||  |||||||| | |||
Sbjct: 182 gcgcagcgcgcgtggattgccaggaactacaagggtttgcaggataagatcaagattgtc 241

                                                                       
Query: 267 gccatcaatctggaggacaaaccagcatggtacaaggagaaggtttacccacagggcacg 326
           || ||  |||| |  ||||  || || |||||||||||||||||||||||| ||  || |
Sbjct: 242 gcgattgatcttgcagacaggcctgcttggtacaaggagaaggtttacccagagaacaag 301

                                                                       
Query: 327 gtgccttccctggagcacgacggcaaggtcaccggagagagcttggatttgatcaagtac 386
           || ||||| || |||||| ||    |||| |  ||||| |||||||||||| ||||||||
Sbjct: 302 gtaccttcacttgagcacaacaatcaggtgaaaggagaaagcttggatttggtcaagtac 361

                                               
Query: 387 atcgacaccaatttccaaggcccggcatttctccct 422
           || |||||||||||| |||| || ||||| ||||||
Sbjct: 362 attgacaccaatttcgaagggccagcattactccct 397
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 74/85 (87%)
 Strand = Plus / Minus

                                                                           
Query: 244     tgcaggacgagatcaagctggtcgccatcaatctggaggacaaaccagcatggtacaagg 303
               |||||||| ||||| |||| |||| |||  ||||| ||||||||||||| |||||||| |
Sbjct: 9691329 tgcaggacaagatcgagctagtcggcattgatctgcaggacaaaccagcttggtacaaag 9691270

                                        
Query: 304     agaaggtttacccacagggcacggt 328
               |||||||||||  ||||||||||||
Sbjct: 9691269 agaaggtttacgaacagggcacggt 9691245



 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 82/97 (84%)
 Strand = Plus / Minus

                                                                           
Query: 326     ggtgccttccctggagcacgacggcaaggtcaccggagagagcttggatttgatcaagta 385
               ||||||||| || |||||| |||||||| |||  || ||||| || ||||||||||||||
Sbjct: 9691140 ggtgccttctctagagcacaacggcaagatcatgggggagagtttagatttgatcaagta 9691081

                                                    
Query: 386     catcgacaccaatttccaaggcccggcatttctccct 422
               |||||||| | ||||| ||||||| ||| | ||||||
Sbjct: 9691080 catcgacagccatttcgaaggccctgcactgctccct 9691044



 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 56/63 (88%)
 Strand = Plus / Minus

                                                                           
Query: 360     ggagagagcttggatttgatcaagtacatcgacaccaatttccaaggcccggcatttctc 419
               ||||| |||||||||||| |||||||||| |||||||||||| |||| || ||||| |||
Sbjct: 9685640 ggagaaagcttggatttggtcaagtacattgacaccaatttcgaagggccagcattactc 9685581

                  
Query: 420     cct 422
               |||
Sbjct: 9685580 cct 9685578



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 71/84 (84%)
 Strand = Plus / Minus

                                                                           
Query: 426     gatcctgctaagaggcagtttgctgatgagctgattgcttacgctgacgcctttaccaga 485
               |||||||  ||||| ||||||||||||||||| ||||| || ||  | || ||||||| |
Sbjct: 9690878 gatcctgagaagagacagtttgctgatgagcttattgcgtatgccaatgcgtttaccaaa 9690819

                                       
Query: 486     gcactctactcgcccttgatctcc 509
               ||||||||||| ||||| ||||||
Sbjct: 9690818 gcactctactcacccttaatctcc 9690795



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 59/69 (85%)
 Strand = Plus / Minus

                                                                           
Query: 110     gaaagaagcgctcccgcctgcactgggcgccgtctccgagccccctcccctcttcgatgg 169
               |||||||||||| ||  |||| || ||| ||| ||| |||||||||| ||||||||| ||
Sbjct: 9691686 gaaagaagcgcttcccgctgcgctcggctccgcctctgagccccctcgcctcttcgacgg 9691627

                        
Query: 170     caccaccag 178
               |||||||||
Sbjct: 9691626 caccaccag 9691618



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                               
Query: 147     gagccccctcccctcttcgatggcaccaccag 178
               ||||||||||||||||||||||| ||||||||
Sbjct: 9686556 gagccccctcccctcttcgatggaaccaccag 9686525



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                                 
Query: 360     ggagagagcttggatttgatcaagtacatcgaca 393
               |||||||| |||||||||||||||||||| ||||
Sbjct: 9681596 ggagagagtttggatttgatcaagtacatagaca 9681563



 Score = 48.1 bits (24), Expect = 0.031
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                       
Query: 294     tggtacaaggagaaggtttaccca 317
               ||||||||||||||||||||||||
Sbjct: 9686119 tggtacaaggagaaggtttaccca 9686096



 Score = 44.1 bits (22), Expect = 0.49
 Identities = 49/58 (84%)
 Strand = Plus / Minus

                                                                         
Query: 183     tacatttgctacatctgtccgtttgcccagcgtgcctgggttacccggaactgcaagg 240
               |||||||||||| |||| |||||||| ||||| || ||| ||| | |||||| |||||
Sbjct: 9691505 tacatttgctacttctgcccgtttgctcagcgcgcttggattatcaggaacttcaagg 9691448



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 73      tcgcaatggccgcagctgcagcacc 97
               |||| ||||||||||||||||||||
Sbjct: 9691845 tcgccatggccgcagctgcagcacc 9691821
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>gb|AC084405.6| Oryza sativa chromosome 3 BAC OSJNBa0044H10 genomic sequence, complete
              sequence
          Length = 165113

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 74/85 (87%)
 Strand = Plus / Minus

                                                                          
Query: 244    tgcaggacgagatcaagctggtcgccatcaatctggaggacaaaccagcatggtacaagg 303
              |||||||| ||||| |||| |||| |||  ||||| ||||||||||||| |||||||| |
Sbjct: 112228 tgcaggacaagatcgagctagtcggcattgatctgcaggacaaaccagcttggtacaaag 112169

                                       
Query: 304    agaaggtttacccacagggcacggt 328
              |||||||||||  ||||||||||||
Sbjct: 112168 agaaggtttacgaacagggcacggt 112144



 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 82/97 (84%)
 Strand = Plus / Minus

                                                                          
Query: 326    ggtgccttccctggagcacgacggcaaggtcaccggagagagcttggatttgatcaagta 385
              ||||||||| || |||||| |||||||| |||  || ||||| || ||||||||||||||
Sbjct: 112039 ggtgccttctctagagcacaacggcaagatcatgggggagagtttagatttgatcaagta 111980

                                                   
Query: 386    catcgacaccaatttccaaggcccggcatttctccct 422
              |||||||| | ||||| ||||||| ||| | ||||||
Sbjct: 111979 catcgacagccatttcgaaggccctgcactgctccct 111943



 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 56/63 (88%)
 Strand = Plus / Minus

                                                                          
Query: 360    ggagagagcttggatttgatcaagtacatcgacaccaatttccaaggcccggcatttctc 419
              ||||| |||||||||||| |||||||||| |||||||||||| |||| || ||||| |||
Sbjct: 106539 ggagaaagcttggatttggtcaagtacattgacaccaatttcgaagggccagcattactc 106480

                 
Query: 420    cct 422
              |||
Sbjct: 106479 cct 106477



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 71/84 (84%)
 Strand = Plus / Minus

                                                                          
Query: 426    gatcctgctaagaggcagtttgctgatgagctgattgcttacgctgacgcctttaccaga 485
              |||||||  ||||| ||||||||||||||||| ||||| || ||  | || ||||||| |
Sbjct: 111777 gatcctgagaagagacagtttgctgatgagcttattgcgtatgccaatgcgtttaccaaa 111718

                                      
Query: 486    gcactctactcgcccttgatctcc 509
              ||||||||||| ||||| ||||||
Sbjct: 111717 gcactctactcacccttaatctcc 111694



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 59/69 (85%)
 Strand = Plus / Minus

                                                                          
Query: 110    gaaagaagcgctcccgcctgcactgggcgccgtctccgagccccctcccctcttcgatgg 169
              |||||||||||| ||  |||| || ||| ||| ||| |||||||||| ||||||||| ||
Sbjct: 112585 gaaagaagcgcttcccgctgcgctcggctccgcctctgagccccctcgcctcttcgacgg 112526

                       
Query: 170    caccaccag 178
              |||||||||
Sbjct: 112525 caccaccag 112517



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                              
Query: 147    gagccccctcccctcttcgatggcaccaccag 178
              ||||||||||||||||||||||| ||||||||
Sbjct: 107455 gagccccctcccctcttcgatggaaccaccag 107424



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                                
Query: 360    ggagagagcttggatttgatcaagtacatcgaca 393
              |||||||| |||||||||||||||||||| ||||
Sbjct: 102495 ggagagagtttggatttgatcaagtacatagaca 102462



 Score = 48.1 bits (24), Expect = 0.031
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                      
Query: 294    tggtacaaggagaaggtttaccca 317
              ||||||||||||||||||||||||
Sbjct: 107018 tggtacaaggagaaggtttaccca 106995



 Score = 44.1 bits (22), Expect = 0.49
 Identities = 49/58 (84%)
 Strand = Plus / Minus

                                                                        
Query: 183    tacatttgctacatctgtccgtttgcccagcgtgcctgggttacccggaactgcaagg 240
              |||||||||||| |||| |||||||| ||||| || ||| ||| | |||||| |||||
Sbjct: 112404 tacatttgctacttctgcccgtttgctcagcgcgcttggattatcaggaacttcaagg 112347



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 73     tcgcaatggccgcagctgcagcacc 97
              |||| ||||||||||||||||||||
Sbjct: 112744 tcgccatggccgcagctgcagcacc 112720
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 74/85 (87%)
 Strand = Plus / Minus

                                                                           
Query: 244     tgcaggacgagatcaagctggtcgccatcaatctggaggacaaaccagcatggtacaagg 303
               |||||||| ||||| |||| |||| |||  ||||| ||||||||||||| |||||||| |
Sbjct: 9689450 tgcaggacaagatcgagctagtcggcattgatctgcaggacaaaccagcttggtacaaag 9689391

                                        
Query: 304     agaaggtttacccacagggcacggt 328
               |||||||||||  ||||||||||||
Sbjct: 9689390 agaaggtttacgaacagggcacggt 9689366



 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 82/97 (84%)
 Strand = Plus / Minus

                                                                           
Query: 326     ggtgccttccctggagcacgacggcaaggtcaccggagagagcttggatttgatcaagta 385
               ||||||||| || |||||| |||||||| |||  || ||||| || ||||||||||||||
Sbjct: 9689261 ggtgccttctctagagcacaacggcaagatcatgggggagagtttagatttgatcaagta 9689202

                                                    
Query: 386     catcgacaccaatttccaaggcccggcatttctccct 422
               |||||||| | ||||| ||||||| ||| | ||||||
Sbjct: 9689201 catcgacagccatttcgaaggccctgcactgctccct 9689165



 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 56/63 (88%)
 Strand = Plus / Minus

                                                                           
Query: 360     ggagagagcttggatttgatcaagtacatcgacaccaatttccaaggcccggcatttctc 419
               ||||| |||||||||||| |||||||||| |||||||||||| |||| || ||||| |||
Sbjct: 9683761 ggagaaagcttggatttggtcaagtacattgacaccaatttcgaagggccagcattactc 9683702

                  
Query: 420     cct 422
               |||
Sbjct: 9683701 cct 9683699



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 71/84 (84%)
 Strand = Plus / Minus

                                                                           
Query: 426     gatcctgctaagaggcagtttgctgatgagctgattgcttacgctgacgcctttaccaga 485
               |||||||  ||||| ||||||||||||||||| ||||| || ||  | || ||||||| |
Sbjct: 9688999 gatcctgagaagagacagtttgctgatgagcttattgcgtatgccaatgcgtttaccaaa 9688940

                                       
Query: 486     gcactctactcgcccttgatctcc 509
               ||||||||||| ||||| ||||||
Sbjct: 9688939 gcactctactcacccttaatctcc 9688916



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 59/69 (85%)
 Strand = Plus / Minus

                                                                           
Query: 110     gaaagaagcgctcccgcctgcactgggcgccgtctccgagccccctcccctcttcgatgg 169
               |||||||||||| ||  |||| || ||| ||| ||| |||||||||| ||||||||| ||
Sbjct: 9689807 gaaagaagcgcttcccgctgcgctcggctccgcctctgagccccctcgcctcttcgacgg 9689748

                        
Query: 170     caccaccag 178
               |||||||||
Sbjct: 9689747 caccaccag 9689739



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                               
Query: 147     gagccccctcccctcttcgatggcaccaccag 178
               ||||||||||||||||||||||| ||||||||
Sbjct: 9684677 gagccccctcccctcttcgatggaaccaccag 9684646



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                                 
Query: 360     ggagagagcttggatttgatcaagtacatcgaca 393
               |||||||| |||||||||||||||||||| ||||
Sbjct: 9679717 ggagagagtttggatttgatcaagtacatagaca 9679684



 Score = 48.1 bits (24), Expect = 0.031
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                       
Query: 294     tggtacaaggagaaggtttaccca 317
               ||||||||||||||||||||||||
Sbjct: 9684240 tggtacaaggagaaggtttaccca 9684217



 Score = 44.1 bits (22), Expect = 0.49
 Identities = 49/58 (84%)
 Strand = Plus / Minus

                                                                         
Query: 183     tacatttgctacatctgtccgtttgcccagcgtgcctgggttacccggaactgcaagg 240
               |||||||||||| |||| |||||||| ||||| || ||| ||| | |||||| |||||
Sbjct: 9689626 tacatttgctacttctgcccgtttgctcagcgcgcttggattatcaggaacttcaagg 9689569



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 73      tcgcaatggccgcagctgcagcacc 97
               |||| ||||||||||||||||||||
Sbjct: 9689966 tcgccatggccgcagctgcagcacc 9689942
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>gb|AY111952.1| Zea mays CL5438_1 mRNA sequence
          Length = 1008

 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 142/176 (80%)
 Strand = Plus / Plus

                                                                       
Query: 231 aactgcaagggtctgcaggacgagatcaagctggtcgccatcaatctggaggacaaacca 290
           |||| ||||||||| |||||| |||| ||| | || |||||| |||| |  ||||  |||
Sbjct: 171 aactacaagggtctacaggacaagattaagatagttgccatcgatctcgctgacaggcca 230

                                                                       
Query: 291 gcatggtacaaggagaaggtttacccacagggcacggtgccttccctggagcacgacggc 350
           || |||||||||||||||||||| ||| |   || ||||||||| || |||||||||  |
Sbjct: 231 gcgtggtacaaggagaaggtttatccagaaaacaaggtgccttctctagagcacgacaac 290

                                                                   
Query: 351 aaggtcaccggagagagcttggatttgatcaagtacatcgacaccaatttccaagg 406
            |||| |  |||||||||||||||||| | |||||||| |||| ||| ||| ||||
Sbjct: 291 caggtgaaaggagagagcttggatttggttaagtacattgacagcaacttcaaagg 346
to top
>ref|XM_493843.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 885

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                             
Query: 360 ggagagagcttggatttgatcaagtacatcgaca 393
           |||||||| |||||||||||||||||||| ||||
Sbjct: 265 ggagagagtttggatttgatcaagtacatagaca 298
to top
>gb|AY664419.1| Zea mays cultivar Mo17 locus 9009, complete sequence
          Length = 405672

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                     
Query: 275    tctggaggacaaaccagcatggtacaaggagaaggttta 313
              |||| ||||||  ||||| ||||||||||||||||||||
Sbjct: 241250 tctgcaggacaggccagcgtggtacaaggagaaggttta 241288
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>gb|AY664415.1| Zea mays cultivar B73 locus 9009, complete sequence
          Length = 323584

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                     
Query: 275    tctggaggacaaaccagcatggtacaaggagaaggttta 313
              |||| ||||||  ||||| ||||||||||||||||||||
Sbjct: 226738 tctgcaggacaggccagcgtggtacaaggagaaggttta 226776
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>gb|AC172870.1| Brassica rapa subsp. pekinensis clone KBrH004A06, complete sequence
          Length = 145603

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                            
Query: 376   tgatcaagtacatcgacaccaatttccaagg 406
             |||| ||||||||||||||||||||| ||||
Sbjct: 20816 tgattaagtacatcgacaccaatttcgaagg 20846
to top
>gb|AY332468.1| Oryza sativa (japonica cultivar-group) glutathione S-transferase
           (GST) mRNA, complete cds
          Length = 1092

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                             
Query: 360 ggagagagcttggatttgatcaagtacatcgaca 393
           |||||||| ||| |||||||||||||||| ||||
Sbjct: 303 ggagagagtttgcatttgatcaagtacatagaca 336
to top
>gb|AF249913.1|AF249913 Glycine max In2-1 protein mRNA, complete cds
          Length = 1024

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 40/46 (86%)
 Strand = Plus / Plus

                                                         
Query: 142 tctccgagccccctcccctcttcgatggcaccaccagactgtacat 187
           ||||||| || ||||| || |||||||||||||||||  |||||||
Sbjct: 86  tctccgacccacctcctcttttcgatggcaccaccaggttgtacat 131
to top
>gb|AC124228.16| Mus musculus chromosome 5, clone RP23-345O14, complete sequence
          Length = 219244

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 531    gctgttgccgctttagacaga 551
              |||||||||||||||||||||
Sbjct: 215802 gctgttgccgctttagacaga 215822
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>gb|AC132102.3| Mus musculus BAC clone RP24-360K9 from chromosome 5, complete sequence
          Length = 144545

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 531   gctgttgccgctttagacaga 551
             |||||||||||||||||||||
Sbjct: 65885 gctgttgccgctttagacaga 65905
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>emb|BX571857.1| Staphylococcus aureus strain MSSA476, complete genome
          Length = 2799802

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 75      gcaatggccgcagctgcagca 95
               |||||||||||||||||||||
Sbjct: 2591969 gcaatggccgcagctgcagca 2591949
to top
>dbj|AP007150.1| Aspergillus oryzae RIB40 genomic DNA, SC009
          Length = 1913118

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 259     agctggtcgccatcaatctgg 279
               |||||||||||||||||||||
Sbjct: 1300024 agctggtcgccatcaatctgg 1300044
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>dbj|BA000017.4| Staphylococcus aureus subsp. aureus Mu50 DNA, complete genome
          Length = 2878529

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 75      gcaatggccgcagctgcagca 95
               |||||||||||||||||||||
Sbjct: 2673481 gcaatggccgcagctgcagca 2673461
to top
>gb|CP000046.1| Staphylococcus aureus subsp. aureus COL, complete genome
          Length = 2809422

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 75      gcaatggccgcagctgcagca 95
               |||||||||||||||||||||
Sbjct: 2602471 gcaatggccgcagctgcagca 2602451
to top
>gb|DP000035.1| Oryctolagus cuniculus target 116 genomic scaffold
          Length = 434755

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 72     gtcgcaatggccgcagctgca 92
              |||||||||||||||||||||
Sbjct: 244410 gtcgcaatggccgcagctgca 244390
to top
>gb|CP000253.1| Staphylococcus aureus subsp. aureus NCTC 8325, complete genome
          Length = 2821361

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 75      gcaatggccgcagctgcagca 95
               |||||||||||||||||||||
Sbjct: 2614415 gcaatggccgcagctgcagca 2614395
to top
>gb|CP000255.1| Staphylococcus aureus subsp. aureus USA300, complete genome
          Length = 2872769

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 75      gcaatggccgcagctgcagca 95
               |||||||||||||||||||||
Sbjct: 2665777 gcaatggccgcagctgcagca 2665757
to top
>dbj|BA000033.2| Staphylococcus aureus subsp. aureus MW2 DNA, complete genome, strain:MW2
          Length = 2820462

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 75      gcaatggccgcagctgcagca 95
               |||||||||||||||||||||
Sbjct: 2612611 gcaatggccgcagctgcagca 2612591
to top
>dbj|BA000018.3| Staphylococcus aureus subsp. aureus N315 genomic DNA, complete genome
          Length = 2814816

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 75      gcaatggccgcagctgcagca 95
               |||||||||||||||||||||
Sbjct: 2603055 gcaatggccgcagctgcagca 2603035
to top
>gb|AE005674.1| Shigella flexneri 2a str. 301, complete genome
          Length = 4607203

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 217    cctgggttacccggaactgc 236
              ||||||||||||||||||||
Sbjct: 308894 cctgggttacccggaactgc 308913
to top
>ref|XM_507653.1| PREDICTED: Pan troglodytes similar to CUGBP2 protein (LOC450298),
            mRNA
          Length = 3240

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 80   ggccgcagctgcagcaccagccag 103
            |||||||||||||||| |||||||
Sbjct: 1614 ggccgcagctgcagcagcagccag 1591
to top
>ref|NM_001025077.1| Homo sapiens CUG triplet repeat, RNA binding protein 2 (CUGBP2),
           transcript variant 3, mRNA
          Length = 9227

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 80  ggccgcagctgcagcaccagccag 103
           |||||||||||||||| |||||||
Sbjct: 946 ggccgcagctgcagcagcagccag 923
to top
>ref|NM_001025076.1| Homo sapiens CUG triplet repeat, RNA binding protein 2 (CUGBP2),
            transcript variant 1, mRNA
          Length = 7996

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 80   ggccgcagctgcagcaccagccag 103
            |||||||||||||||| |||||||
Sbjct: 1055 ggccgcagctgcagcagcagccag 1032
to top
>ref|NM_006561.2| Homo sapiens CUG triplet repeat, RNA binding protein 2 (CUGBP2),
            transcript variant 2, mRNA
          Length = 7965

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 80   ggccgcagctgcagcaccagccag 103
            |||||||||||||||| |||||||
Sbjct: 1024 ggccgcagctgcagcagcagccag 1001
to top
>ref|XM_593586.2| PREDICTED: Bos taurus similar to regulatory solute carrier protein,
           family 1, member 1 (LOC515551), mRNA
          Length = 3258

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 88  ctgcagcaccagccaggccc 107
           ||||||||||||||||||||
Sbjct: 111 ctgcagcaccagccaggccc 130
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>ref|XM_951164.1| Neurospora crassa OR74A hypothetical protein ( (AL451012) related to
            c-module-binding factor [Neurospora crassa OR74A] )
            (NCU01554.1) partial mRNA
          Length = 4377

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 84   gcagctgcagcaccagccag 103
            ||||||||||||||||||||
Sbjct: 2968 gcagctgcagcaccagccag 2987
to top
>ref|XM_327992.1| Neurospora crassa OR74A hypothetical protein ( (AL451012) related to
            c-module-binding factor [Neurospora crassa OR74A] )
            (NCU01554.1) partial mRNA
          Length = 4377

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 84   gcagctgcagcaccagccag 103
            ||||||||||||||||||||
Sbjct: 2968 gcagctgcagcaccagccag 2987
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>ref|XM_533812.2| PREDICTED: Canis familiaris similar to Vpr-binding protein,
            transcript variant 1 (LOC476609), mRNA
          Length = 5748

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 435  aagaggcagtttgctgatga 454
            ||||||||||||||||||||
Sbjct: 2016 aagaggcagtttgctgatga 1997
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>ref|XM_845017.1| PREDICTED: Canis familiaris similar to Vpr-binding protein,
            transcript variant 2 (LOC476609), mRNA
          Length = 4737

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 435  aagaggcagtttgctgatga 454
            ||||||||||||||||||||
Sbjct: 1005 aagaggcagtttgctgatga 986
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>gb|AC026887.9| Homo sapiens chromosome 10 clone RP11-544P1, complete sequence
          Length = 187495

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 80     ggccgcagctgcagcaccagccag 103
              |||||||||||||||| |||||||
Sbjct: 141098 ggccgcagctgcagcagcagccag 141121
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>gb|U00096.2| Escherichia coli K-12 MG1655, complete genome
          Length = 4639675

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 217    cctgggttacccggaactgc 236
              ||||||||||||||||||||
Sbjct: 259788 cctgggttacccggaactgc 259807
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>emb|X00786.1|ECPROAB E. coli genes proA  and proB for GPR and for GK (GPR =
           gamma-glutamyl phosphate reductase EC 1.2.1.41) (GK =
           gamma-glutamyl kinase EC 2.7.2.11)
          Length = 3041

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 217 cctgggttacccggaactgc 236
           ||||||||||||||||||||
Sbjct: 530 cctgggttacccggaactgc 549
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>emb|CR861433.1| Pongo pygmaeus mRNA; cDNA DKFZp459J202 (from clone DKFZp459J202)
          Length = 3790

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 80  ggccgcagctgcagcaccagccag 103
           |||||||||||||||| |||||||
Sbjct: 887 ggccgcagctgcagcagcagccag 864
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>emb|CR861202.1| Pongo pygmaeus mRNA; cDNA DKFZp459F043 (from clone DKFZp459F043)
          Length = 3977

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 80   ggccgcagctgcagcaccagccag 103
            |||||||||||||||| |||||||
Sbjct: 1088 ggccgcagctgcagcagcagccag 1065
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>emb|CR860449.1| Pongo pygmaeus mRNA; cDNA DKFZp459A171 (from clone DKFZp459A171)
          Length = 3817

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 80  ggccgcagctgcagcaccagccag 103
           |||||||||||||||| |||||||
Sbjct: 915 ggccgcagctgcagcagcagccag 892
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>emb|CR859609.1| Pongo pygmaeus mRNA; cDNA DKFZp459C204 (from clone DKFZp459C204)
          Length = 3810

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 80  ggccgcagctgcagcaccagccag 103
           |||||||||||||||| |||||||
Sbjct: 935 ggccgcagctgcagcagcagccag 912
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>emb|CR859087.1| Pongo pygmaeus mRNA; cDNA DKFZp459F0628 (from clone DKFZp459F0628)
          Length = 3915

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 80   ggccgcagctgcagcaccagccag 103
            |||||||||||||||| |||||||
Sbjct: 1011 ggccgcagctgcagcagcagccag 988
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>gb|BC036391.1| Homo sapiens CUG triplet repeat, RNA binding protein 2, mRNA (cDNA
            clone MGC:41846 IMAGE:5260623), complete cds
          Length = 1975

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 80   ggccgcagctgcagcaccagccag 103
            |||||||||||||||| |||||||
Sbjct: 1032 ggccgcagctgcagcagcagccag 1009
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>emb|AL451012.1|NCB21O8 Neurospora crassa DNA linkage group II BAC clone B21O8
          Length = 41593

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 84    gcagctgcagcaccagccag 103
             ||||||||||||||||||||
Sbjct: 12190 gcagctgcagcaccagccag 12209
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>dbj|AP009048.1| Escherichia coli W3110 DNA, complete genome
          Length = 4646332

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 217    cctgggttacccggaactgc 236
              ||||||||||||||||||||
Sbjct: 259788 cctgggttacccggaactgc 259807
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>gb|AC090434.43| Chlamydomonas reinhardtii clone cr-1j6, complete sequence
          Length = 127686

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 81    gccgcagctgcagcaccagc 100
             ||||||||||||||||||||
Sbjct: 20411 gccgcagctgcagcaccagc 20430
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>ref|XM_695749.1| PREDICTED: Danio rerio similar to alpha-2-macroglobulin-1
           (LOC572081), partial mRNA
          Length = 1213

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 169 gcaccaccagactgtacatttgct 192
           |||| |||||||||||||||||||
Sbjct: 623 gcacaaccagactgtacatttgct 600
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>gb|AF432906.1|AF432906 Homo sapiens neuroblastoma apoptosis-related RNA-binding protein
           isoform 4 mRNA, complete cds
          Length = 1712

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 80  ggccgcagctgcagcaccagccag 103
           |||||||||||||||| |||||||
Sbjct: 966 ggccgcagctgcagcagcagccag 943
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>gb|AF295067.1|AF314199S6 Homo sapiens neuroplastoma apoptosis-related RNA-binding protein
            (CUGBP2) gene, exon 9
          Length = 5826

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 80   ggccgcagctgcagcaccagccag 103
            |||||||||||||||| |||||||
Sbjct: 1019 ggccgcagctgcagcagcagccag 996
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>gb|U69546.1|HSU69546 Homo sapiens RNA-binding protein BRUNOL3 (BRUNOL3) mRNA, complete
           cds
          Length = 2384

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 80  ggccgcagctgcagcaccagccag 103
           |||||||||||||||| |||||||
Sbjct: 847 ggccgcagctgcagcagcagccag 824
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>gb|AE014073.1| Shigella flexneri 2a str. 2457T, complete genome
          Length = 4599354

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 217    cctgggttacccggaactgc 236
              ||||||||||||||||||||
Sbjct: 311446 cctgggttacccggaactgc 311465
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>emb|AJ340530.1|HSA340530 Homo sapiens genomic sequence surrounding NotI site, clone
           NR1-XE21R
          Length = 700

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 515 ggccatgtcagacgaagctg 534
           ||||||||||||||||||||
Sbjct: 220 ggccatgtcagacgaagctg 239
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>gb|AF036956.1|AF036956 Homo sapiens neuroblastoma apoptosis-related RNA binding protein
            (NAPOR-1) mRNA, complete cds
          Length = 5644

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 80   ggccgcagctgcagcaccagccag 103
            |||||||||||||||| |||||||
Sbjct: 1030 ggccgcagctgcagcagcagccag 1007
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>gb|AF090693.1|AF090693 Homo sapiens apoptosis-related RNA binding protein (NAPOR-3) mRNA,
           complete cds
          Length = 6905

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 80  ggccgcagctgcagcaccagccag 103
           |||||||||||||||| |||||||
Sbjct: 946 ggccgcagctgcagcagcagccag 923
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>gb|AF090694.1|AF090694 Homo sapiens apoptosis-related RNA binding protein (NAPOR-2) mRNA,
           complete cds
          Length = 5516

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 80  ggccgcagctgcagcaccagccag 103
           |||||||||||||||| |||||||
Sbjct: 898 ggccgcagctgcagcagcagccag 875
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>emb|AL355097.5|CNS05TCG Human chromosome 14 DNA sequence BAC R-204N11 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 164686

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 181   tgtacatttgctacatctgt 200
             ||||||||||||||||||||
Sbjct: 96756 tgtacatttgctacatctgt 96737
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>gb|AE005174.2| Escherichia coli O157:H7 EDL933, complete genome
          Length = 5528445

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 217    cctgggttacccggaactgc 236
              ||||||||||||||||||||
Sbjct: 297676 cctgggttacccggaactgc 297695
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>dbj|BA000007.2| Escherichia coli O157:H7 DNA, complete genome
          Length = 5498450

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 217    cctgggttacccggaactgc 236
              ||||||||||||||||||||
Sbjct: 297675 cctgggttacccggaactgc 297694
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>gb|U70214.1|ECU70214 Escherichia coli chromosome minutes 4-6
          Length = 123171

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 217   cctgggttacccggaactgc 236
             ||||||||||||||||||||
Sbjct: 90863 cctgggttacccggaactgc 90882
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>emb|AL731830.7| Mouse DNA sequence from clone RP23-162F19 on chromosome 4, complete
            sequence
          Length = 9442

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 154  ctcccctcttcgatggcaccacca 177
            ||||||||||| ||||||||||||
Sbjct: 3272 ctcccctcttctatggcaccacca 3295
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>gb|CP000038.1| Shigella sonnei Ss046, complete genome
          Length = 4825265

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 217    cctgggttacccggaactgc 236
              ||||||||||||||||||||
Sbjct: 312542 cctgggttacccggaactgc 312561


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,914,373
Number of Sequences: 3902068
Number of extensions: 3914373
Number of successful extensions: 74295
Number of sequences better than 10.0: 65
Number of HSP's better than 10.0 without gapping: 65
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 73874
Number of HSP's gapped (non-prelim): 419
length of query: 562
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 539
effective length of database: 17,143,297,704
effective search space: 9240237462456
effective search space used: 9240237462456
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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