Clone Name | bart44b09 |
---|---|
Clone Library Name | barley_pub |
>PHOSP_NDVB (P24698) Phosphoprotein (Protein P)| Length = 395 Score = 30.4 bits (67), Expect = 2.3 Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 1/33 (3%) Frame = -1 Query: 326 AWTNHGQQEPPAQQN-PRYFTRNNDQPSPPRSS 231 AW HG +PPA Q+ P R++ QPS P + Sbjct: 50 AWEKHGSIQPPASQDTPDRQDRSDKQPSTPEQA 82
>Y147_HAEIN (P44543) Putative TRAP transporter permease protein HI0147| Length = 633 Score = 29.3 bits (64), Expect = 5.2 Identities = 17/50 (34%), Positives = 28/50 (56%) Frame = +2 Query: 278 WGFAALEVLAGHGLSRHAEAQSLSFMKIATHLRRCCFLQSFSVVFLYYFY 427 W FAAL V+A + R +AQ+L+F ++L F+ S ++F F+ Sbjct: 140 WIFAALPVVAILMMFRFIQAQTLNFKTGKSYLPATFFIISAVILFAILFF 189
>TRH_MOUSE (Q62361) Thyroliberin precursor [Contains: Prothyroliberin;| Thyroliberin (Thyrotropin-releasing hormone) (TRH) (Thyrotropin-releasing factor) (TRF) (TSH-releasing factor) (Protirelin)] Length = 256 Score = 28.9 bits (63), Expect = 6.8 Identities = 13/30 (43%), Positives = 15/30 (50%) Frame = -3 Query: 186 EILLGRT*KRERPGRGLRDSKPRWDQEGDS 97 E+ R KR+ PGR K W EGDS Sbjct: 99 EVGAWRPHKRQHPGRRANQDKDSWSDEGDS 128
>ENAM_PIG (O97939) Enamelin precursor [Contains: 89 kDa enamelin; 142 kDa| enamelin; 155 kDa enamelin; 56 kDa enamelin; 32 kDa enamelin; 25 kDa enamelin; 34 kDa enamelin] Length = 1142 Score = 28.9 bits (63), Expect = 6.8 Identities = 13/25 (52%), Positives = 16/25 (64%), Gaps = 1/25 (4%) Frame = +1 Query: 241 GGEGWS-LFRVKYLGFCCAGGSCWP 312 GG+ S +F + G CCAGGS WP Sbjct: 853 GGQKESHVFHLSQRGPCCAGGSMWP 877
>YBOX2_MOUSE (Q9Z2C8) Y-box-binding protein 2 (Germ cell-specific Y-box-binding| protein) (FRGY2 homolog) Length = 360 Score = 28.5 bits (62), Expect = 8.9 Identities = 13/37 (35%), Positives = 17/37 (45%) Frame = -1 Query: 335 PQHAWTNHGQQEPPAQQNPRYFTRNNDQPSPPRSSLA 225 P T+ + EP +N YF R QP PR +A Sbjct: 306 PSQGPTDGSRPEPQRPRNRPYFQRRRQQPPGPRQPIA 342 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 52,608,363 Number of Sequences: 219361 Number of extensions: 816005 Number of successful extensions: 2406 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 2322 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2402 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3014947676 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)