ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart44b06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY623658.2| Aeromicrobium erythreum putative transcriptional ... 46 0.12
2gb|CP000264.1| Jannaschia sp. CCS1, complete genome 44 0.48
3gb|AC079612.6| Homo sapiens BAC clone RP11-314A6 from 2, complet... 44 0.48
4gb|AE010335.1| Methanopyrus kandleri AV19 section 34 of 157 of t... 42 1.9
5ref|XM_525966.1| PREDICTED: Pan troglodytes similar to Homeobox ... 42 1.9
6ref|XM_415658.1| PREDICTED: Gallus gallus similar to Joined to J... 42 1.9
7gb|AC144738.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.9
8ref|XM_957160.1| Neurospora crassa OR74A hypothetical protein (N... 42 1.9
9ref|XM_326400.1| Neurospora crassa OR74A hypothetical protein (N... 42 1.9
10gb|DQ249342.1| Streptomyces hygroscopicus subsp. duamyceticus st... 42 1.9
11gb|AF506520.2| Streptomyces hygroscopicus AHBA gene cluster, par... 42 1.9
12emb|AL939128.1|SCO939128 Streptomyces coelicolor A3(2) complete ... 42 1.9
13ref|XM_939705.1| PREDICTED: Homo sapiens similar to Homeobox eve... 42 1.9
14ref|XM_292968.5| PREDICTED: Homo sapiens similar to Homeobox eve... 42 1.9
15gb|AF346833.1|AF346833 Mentha x piperita menthofuran synthase mR... 42 1.9
16emb|CR406204.1| Gallus gallus finished cDNA, clone ChEST848n23 42 1.9
17dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.9
18dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.9
19gb|AC009336.13|AC009336 Homo sapiens chromosome 2, clone RP11-38... 42 1.9
20emb|AJ329487.1|HSA329487 Homo sapiens genomic sequence surroundi... 42 1.9
21dbj|AK071729.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.9
22emb|AL662951.3|OSJN00154 Oryza sativa genomic DNA, chromosome 4,... 42 1.9
23gb|CP000150.1| Burkholderia sp. 383 chromosome 3, complete sequence 40 7.5
24ref|XM_512387.1| PREDICTED: Pan troglodytes dedicator of cytokin... 40 7.5
25ref|XM_480150.1| Oryza sativa (japonica cultivar-group), mRNA 40 7.5
26ref|NM_184794.1| Oryza sativa (japonica cultivar-group), mRNA 40 7.5
27gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence 40 7.5
28ref|XM_471720.1| Oryza sativa (japonica cultivar-group), predic... 40 7.5
29gb|BC082762.1| Homo sapiens ankyrin repeat domain 25, mRNA (cDNA... 40 7.5
30gb|AC136524.2| Oryza sativa (japonica cultivar-group) chromosome... 40 7.5
31gb|AY639929.1| Homo sapiens SRC-1 interacting protein mRNA, comp... 40 7.5
32gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete ge... 40 7.5
33ref|NM_015493.4| Homo sapiens ankyrin repeat domain 25 (ANKRD25)... 40 7.5
34gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome 40 7.5
35gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, comp... 40 7.5
36gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 7.5
37gb|AC129337.4| Mus musculus BAC clone RP23-123I14 from 1, comple... 40 7.5
38gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome 40 7.5
39gb|AC063922.23| Homo sapiens 3 BAC RP11-315A15 (Roswell Park Can... 40 7.5
40gb|AC099101.7| Rattus norvegicus 14 BAC CH230-186B23 (Children's... 40 7.5
41emb|Y16952.3|AME16952 Amycolatopsis balhimycina biosynthetic gen... 40 7.5
42emb|BX640445.1| Bordetella bronchiseptica strain RB50, complete ... 40 7.5
43emb|BX640415.1| Bordetella pertussis strain Tohama I, complete g... 40 7.5
44emb|BX572595.1| Rhodopseudomonas palustris CGA009 complete genom... 40 7.5
45emb|AL939131.1|SCO939131 Streptomyces coelicolor A3(2) complete ... 40 7.5
46emb|AJ319581.1|FRU319581 Fugu rubripes partial mRNA for cold-sho... 40 7.5
47gb|AC009000.6| Homo sapiens chromosome 19 clone LLNLR-276C11, co... 40 7.5
48dbj|AP008232.1| Sodalis glossinidius str. 'morsitans' DNA, compl... 40 7.5
49gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome 40 7.5
50gb|AE005847.1| Caulobacter crescentus CB15 section 173 of 359 of... 40 7.5
51gb|AC116665.1| Papio hamadryas chromosome , clone RP41-119J13, c... 40 7.5
52gb|AC083942.8| Genomic sequence for Oryza sativa, Nipponbare str... 40 7.5
53gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete g... 40 7.5
54dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.5
55dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.5
56dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.5
57dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.5
58gb|AC109602.6| Oryza sativa chromosome 3 BAC OSJNBa0087M10 genom... 40 7.5
59gb|AC090874.9| Oryza sativa chromosome 3 BAC OJ1523_A02 genomic ... 40 7.5
60dbj|AB040951.2| Homo sapiens mRNA for KIAA1518 protein, partial cds 40 7.5
61gb|BC098312.1| Homo sapiens ankyrin repeat domain 25, mRNA (cDNA... 40 7.5
62dbj|AP003609.2| Oryza sativa (japonica cultivar-group) genomic D... 40 7.5
63dbj|AP004192.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.5
64dbj|AK000011.1| Homo sapiens cDNA FLJ20004 fis, clone ADKA02391 40 7.5
65dbj|AP005467.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.5
66dbj|AP003940.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.5
67ref|XM_320740.2| Anopheles gambiae str. PEST ENSANGP00000020132 ... 40 7.5
68gb|BC098286.1| Homo sapiens ankyrin repeat domain 25, mRNA (cDNA... 40 7.5
69gb|BC098105.1| Homo sapiens ankyrin repeat domain 25, mRNA (cDNA... 40 7.5
70gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, c... 40 7.5
71dbj|AK067128.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.5
72dbj|AK058638.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.5
73gb|BC085767.1| Rattus norvegicus FIP1 like 1 (S. cerevisiae), mR... 40 7.5
74gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 40 7.5
75gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome 40 7.5
76emb|AL731609.2|OSJN00259 Oryza sativa genomic DNA, chromosome 4,... 40 7.5
77ref|NM_001008295.1| Rattus norvegicus FIP1 like 1 (S. cerevisiae... 40 7.5
78dbj|AB018443.1| Oryza sativa (japonica cultivar-group) mRNA for ... 40 7.5 
>gb|AY623658.2| Aeromicrobium erythreum putative transcriptional repressor and
            putative dehydrogenase/reductase genes, complete cds;
            erythromycin biosynthesis gene cluster, complete
            sequence; putative oxidoreductase and LipN genes,
            complete cds; monoamine oxidase gene, partial cds; and
            unknown gene
          Length = 61845

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 233  tcgtcgagccggccgtcgtcgcg 255
            |||||||||||||||||||||||
Sbjct: 5993 tcgtcgagccggccgtcgtcgcg 6015
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>gb|CP000264.1| Jannaschia sp. CCS1, complete genome
          Length = 4317977

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 470     ccgccgccgctgaggaggcccc 491
               ||||||||||||||||||||||
Sbjct: 2309982 ccgccgccgctgaggaggcccc 2309961
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>gb|AC079612.6| Homo sapiens BAC clone RP11-314A6 from 2, complete sequence
          Length = 118368

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 313   gaggtggcaacggctgaggctg 334
             ||||||||||||||||||||||
Sbjct: 41319 gaggtggcaacggctgaggctg 41340
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>gb|AE010335.1| Methanopyrus kandleri AV19 section 34 of 157 of the complete genome
          Length = 12939

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 144  gcccgtcgaggaggctccggc 164
            |||||||||||||||||||||
Sbjct: 9613 gcccgtcgaggaggctccggc 9593
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>ref|XM_525966.1| PREDICTED: Pan troglodytes similar to Homeobox even-skipped homolog
            protein 2 (EVX-2) (LOC470585), mRNA
          Length = 2250

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 465  gccggccgccgccgctgaggaggcc 489
            ||||||||||||||| |||||||||
Sbjct: 1950 gccggccgccgccgccgaggaggcc 1926
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>ref|XM_415658.1| PREDICTED: Gallus gallus similar to Joined to JAZF1 (LOC417406), mRNA
          Length = 3066

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 469  gccgccgccgctgaggaggcc 489
            |||||||||||||||||||||
Sbjct: 1025 gccgccgccgctgaggaggcc 1005
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>gb|AC144738.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0029B02, complete sequence
          Length = 156649

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 154   gaggctccggcgccggcggtggtgg 178
             ||||| |||||||||||||||||||
Sbjct: 45216 gaggccccggcgccggcggtggtgg 45192
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>ref|XM_957160.1| Neurospora crassa OR74A hypothetical protein (NCU06546.1) partial
            mRNA
          Length = 1662

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 468  ggccgccgccgctgaggaggc 488
            |||||||||||||||||||||
Sbjct: 1317 ggccgccgccgctgaggaggc 1337
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>ref|XM_326400.1| Neurospora crassa OR74A hypothetical protein (NCU06546.1) partial
            mRNA
          Length = 1662

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 468  ggccgccgccgctgaggaggc 488
            |||||||||||||||||||||
Sbjct: 1317 ggccgccgccgctgaggaggc 1337
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>gb|DQ249342.1| Streptomyces hygroscopicus subsp. duamyceticus strain JCM4427 unknown
             polyketide biosynthetic gene cluster, partial sequence;
             and AHBA biosynthesis gene cluster, complete sequence
          Length = 55488

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 235   gtcgagccggccgtcgtcgcggtcg 259
             |||||||| ||||||||||||||||
Sbjct: 55403 gtcgagccagccgtcgtcgcggtcg 55379
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>gb|AF506520.2| Streptomyces hygroscopicus AHBA gene cluster, partial sequence
          Length = 13513

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 235  gtcgagccggccgtcgtcgcggtcg 259
            |||||||| ||||||||||||||||
Sbjct: 2821 gtcgagccagccgtcgtcgcggtcg 2797
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>emb|AL939128.1|SCO939128 Streptomyces coelicolor A3(2) complete genome; segment 25/29
          Length = 296500

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 467    cggccgccgccgctgaggagg 487
              |||||||||||||||||||||
Sbjct: 128106 cggccgccgccgctgaggagg 128086
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>ref|XM_939705.1| PREDICTED: Homo sapiens similar to Homeobox even-skipped homolog
            protein 2 (EVX-2) (LOC650617), mRNA
          Length = 1611

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 465  gccggccgccgccgctgaggaggcc 489
            ||||||||||||||| |||||||||
Sbjct: 1311 gccggccgccgccgccgaggaggcc 1287
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>ref|XM_292968.5| PREDICTED: Homo sapiens similar to Homeobox even-skipped homolog
            protein 2 (EVX-2) (LOC344191), mRNA
          Length = 1611

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 465  gccggccgccgccgctgaggaggcc 489
            ||||||||||||||| |||||||||
Sbjct: 1311 gccggccgccgccgccgaggaggcc 1287
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>gb|AF346833.1|AF346833 Mentha x piperita menthofuran synthase mRNA, complete cds
          Length = 1773

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 469 gccgccgccgctgaggaggcc 489
           |||||||||||||||||||||
Sbjct: 260 gccgccgccgctgaggaggcc 240
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>emb|CR406204.1| Gallus gallus finished cDNA, clone ChEST848n23
          Length = 1019

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 469 gccgccgccgctgaggaggcc 489
           |||||||||||||||||||||
Sbjct: 41  gccgccgccgctgaggaggcc 21
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
               sequence
          Length = 35498469

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 191     cggccgtcgtcgttgtcgagg 211
               |||||||||||||||||||||
Sbjct: 3069599 cggccgtcgtcgttgtcgagg 3069579



 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 162      ggcgccggcggtggtggagg 181
                ||||||||||||||||||||
Sbjct: 13705105 ggcgccggcggtggtggagg 13705086
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 154     gaggctccggcgccggcggtggtgg 178
               ||||| |||||||||||||||||||
Sbjct: 4534749 gaggccccggcgccggcggtggtgg 4534725



 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 162      ggcgccggcggtggtggagg 181
                ||||||||||||||||||||
Sbjct: 14111699 ggcgccggcggtggtggagg 14111718
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>gb|AC009336.13|AC009336 Homo sapiens chromosome 2, clone RP11-387A1, complete sequence
          Length = 175667

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 465   gccggccgccgccgctgaggaggcc 489
             ||||||||||||||| |||||||||
Sbjct: 64396 gccggccgccgccgccgaggaggcc 64420
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>emb|AJ329487.1|HSA329487 Homo sapiens genomic sequence surrounding NotI site, clone
           NR5-GC22C
          Length = 656

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 465 gccggccgccgccgctgaggaggcc 489
           ||||||||||||||| |||||||||
Sbjct: 66  gccggccgccgccgccgaggaggcc 42
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>dbj|AK071729.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023110H11, full
           insert sequence
          Length = 754

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 154 gaggctccggcgccggcggtggtgg 178
           ||||| |||||||||||||||||||
Sbjct: 237 gaggccccggcgccggcggtggtgg 261
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>emb|AL662951.3|OSJN00154 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0011E07,
              complete sequence
          Length = 165094

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 191    cggccgtcgtcgttgtcgagg 211
              |||||||||||||||||||||
Sbjct: 130674 cggccgtcgtcgttgtcgagg 130654
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>gb|CP000150.1| Burkholderia sp. 383 chromosome 3, complete sequence
          Length = 1395069

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 178    gaggctgtcgagccggccgt 197
              ||||||||||||||||||||
Sbjct: 697849 gaggctgtcgagccggccgt 697868



 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 328    gaggctgtcgagccggccgt 347
              ||||||||||||||||||||
Sbjct: 697849 gaggctgtcgagccggccgt 697868
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>ref|XM_512387.1| PREDICTED: Pan troglodytes dedicator of cytokinesis 6 (LOC455723),
            mRNA
          Length = 9247

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 177  ggaggctgtcgagccggccg 196
            ||||||||||||||||||||
Sbjct: 5646 ggaggctgtcgagccggccg 5627
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>ref|XM_480150.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 345

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 247 gtcgtcgcggtcgaggaggc 266
           ||||||||||||||||||||
Sbjct: 315 gtcgtcgcggtcgaggaggc 334
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>ref|NM_184794.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 879

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 163 gcgccggcggtggtggaggc 182
           ||||||||||||||||||||
Sbjct: 583 gcgccggcggtggtggaggc 602
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>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence
          Length = 3587082

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 240    gccggccgtcgtcgcggtcg 259
              ||||||||||||||||||||
Sbjct: 114009 gccggccgtcgtcgcggtcg 114028
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>ref|XM_471720.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2724

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 162  ggcgccggcggtggtggagg 181
            ||||||||||||||||||||
Sbjct: 1017 ggcgccggcggtggtggagg 1036
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>gb|BC082762.1| Homo sapiens ankyrin repeat domain 25, mRNA (cDNA clone MGC:99699
           IMAGE:6497026), complete cds
          Length = 3861

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 177 ggaggctgtcgagccggccg 196
           ||||||||||||||||||||
Sbjct: 789 ggaggctgtcgagccggccg 770
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>gb|AC136524.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0474A01,
             complete sequence
          Length = 140077

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 162   ggcgccggcggtggtggagg 181
             ||||||||||||||||||||
Sbjct: 59254 ggcgccggcggtggtggagg 59273
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>gb|AY639929.1| Homo sapiens SRC-1 interacting protein mRNA, complete cds
          Length = 2580

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 177 ggaggctgtcgagccggccg 196
           ||||||||||||||||||||
Sbjct: 474 ggaggctgtcgagccggccg 455
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>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome
          Length = 3696649

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 234     cgtcgagccggccgtcgtcg 253
               ||||||||||||||||||||
Sbjct: 1318468 cgtcgagccggccgtcgtcg 1318487
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>ref|NM_015493.4| Homo sapiens ankyrin repeat domain 25 (ANKRD25), mRNA
          Length = 5177

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 177 ggaggctgtcgagccggccg 196
           ||||||||||||||||||||
Sbjct: 798 ggaggctgtcgagccggccg 779
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>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome
          Length = 3402093

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 387     gccggccgtgaccgagctgg 406
               ||||||||||||||||||||
Sbjct: 1510609 gccggccgtgaccgagctgg 1510590
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>gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, complete genome
          Length = 5928787

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 138     cgccatgcccgtcgaggagg 157
               ||||||||||||||||||||
Sbjct: 3868696 cgccatgcccgtcgaggagg 3868715
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 163      gcgccggcggtggtggaggc 182
                ||||||||||||||||||||
Sbjct: 22106739 gcgccggcggtggtggaggc 22106720



 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 469     gccgccgccgctgaggaggc 488
               ||||||||||||||||||||
Sbjct: 9452839 gccgccgccgctgaggaggc 9452858
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>gb|AC129337.4| Mus musculus BAC clone RP23-123I14 from 1, complete sequence
          Length = 184705

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 512   agaccaaagagccggaagctgccc 535
             |||||||||||| |||||||||||
Sbjct: 72463 agaccaaagagctggaagctgccc 72440
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>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 235     gtcgagccggccgtcgtcgc 254
               ||||||||||||||||||||
Sbjct: 1982248 gtcgagccggccgtcgtcgc 1982267



 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 183     tgtcgagccggccgtcgtcg 202
               ||||||||||||||||||||
Sbjct: 1982247 tgtcgagccggccgtcgtcg 1982266
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>gb|AC063922.23| Homo sapiens 3 BAC RP11-315A15 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 97817

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 432   ggagaccaaggaggccgagacaga 455
             |||| |||||||||||||||||||
Sbjct: 71295 ggaggccaaggaggccgagacaga 71318
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>gb|AC099101.7| Rattus norvegicus 14 BAC CH230-186B23 (Children's Hospital Oakland
              Research Institute) complete sequence
          Length = 211584

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 524    cggaagctgcccctgccgag 543
              ||||||||||||||||||||
Sbjct: 167945 cggaagctgcccctgccgag 167964
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>emb|Y16952.3|AME16952 Amycolatopsis balhimycina biosynthetic gene cluster for balhimycin,
            strain DSM 5908
          Length = 66669

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 464  agccggccgccgccgctgaggagg 487
            |||||||||||||||| |||||||
Sbjct: 7520 agccggccgccgccgccgaggagg 7543
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>emb|BX640445.1| Bordetella bronchiseptica strain RB50, complete genome; segment 9/16
          Length = 348706

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 291    cgagccggccgtcgacacagtcga 314
              |||||||||||||||||| |||||
Sbjct: 325938 cgagccggccgtcgacacggtcga 325915
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>emb|BX640415.1| Bordetella pertussis strain Tohama I, complete genome; segment 5/12
          Length = 347071

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 291    cgagccggccgtcgacacagtcga 314
              |||||||||||||||||| |||||
Sbjct: 321054 cgagccggccgtcgacacggtcga 321077
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>emb|BX572595.1| Rhodopseudomonas palustris CGA009 complete genome; segment 3/16
          Length = 349260

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 333    tgtcgagccggccgttgtcg 352
              ||||||||||||||||||||
Sbjct: 223180 tgtcgagccggccgttgtcg 223199
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>emb|AL939131.1|SCO939131 Streptomyces coelicolor A3(2) complete genome; segment 28/29
          Length = 303550

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 217    accgtggcggtggaggtcgtcgagccgg 244
              ||||||| |||||||||||| |||||||
Sbjct: 220363 accgtggaggtggaggtcgtggagccgg 220336
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>emb|AJ319581.1|FRU319581 Fugu rubripes partial mRNA for cold-shock domain protein (fruYP1
           gene)
          Length = 1238

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 431 cggagaccaaggaggccgagacag 454
           ||||||||||||||||| ||||||
Sbjct: 762 cggagaccaaggaggccaagacag 785
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>gb|AC009000.6| Homo sapiens chromosome 19 clone LLNLR-276C11, complete sequence
          Length = 37107

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 177   ggaggctgtcgagccggccg 196
             ||||||||||||||||||||
Sbjct: 11966 ggaggctgtcgagccggccg 11947
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>dbj|AP008232.1| Sodalis glossinidius str. 'morsitans' DNA, complete genome
          Length = 4171146

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 322    acggctgaggctgtcgagccggcc 345
              ||||| ||||||||||||||||||
Sbjct: 130633 acggcggaggctgtcgagccggcc 130656
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>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 333     tgtcgagccggccgttgtcg 352
               ||||||||||||||||||||
Sbjct: 5345007 tgtcgagccggccgttgtcg 5345026
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>gb|AE005847.1| Caulobacter crescentus CB15 section 173 of 359 of the complete genome
          Length = 10886

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 242  cggccgtcgtcgcggtcgag 261
            ||||||||||||||||||||
Sbjct: 9660 cggccgtcgtcgcggtcgag 9641
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>gb|AC116665.1| Papio hamadryas chromosome , clone RP41-119J13, complete sequence
          Length = 176602

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 466   ccggccgccgccgctgaggaggcc 489
             |||||||||||||| |||||||||
Sbjct: 21144 ccggccgccgccgcggaggaggcc 21167
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>gb|AC083942.8| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBa0002D01, from chromosome 3, complete sequence
          Length = 187589

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 469    gccgccgccgctgaggaggc 488
              ||||||||||||||||||||
Sbjct: 150239 gccgccgccgctgaggaggc 150258
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>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome
          Length = 2909809

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 240     gccggccgtcgtcgcggtcg 259
               ||||||||||||||||||||
Sbjct: 2732538 gccggccgtcgtcgcggtcg 2732557



 Score = 40.1 bits (20), Expect = 7.5
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                               
Query: 232     gtcgtcgagccggccgtcgtcgcggtcgagga 263
               ||||||||||| | ||| ||||||||||||||
Sbjct: 1315449 gtcgtcgagcccgtcgtggtcgcggtcgagga 1315418
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 247     gtcgtcgcggtcgaggaggc 266
               ||||||||||||||||||||
Sbjct: 3111094 gtcgtcgcggtcgaggaggc 3111075
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 235      gtcgagccggccgtcgtcgc 254
                ||||||||||||||||||||
Sbjct: 24494742 gtcgagccggccgtcgtcgc 24494761
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 163      gcgccggcggtggtggaggc 182
                ||||||||||||||||||||
Sbjct: 22099768 gcgccggcggtggtggaggc 22099749



 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 469     gccgccgccgctgaggaggc 488
               ||||||||||||||||||||
Sbjct: 9450960 gccgccgccgctgaggaggc 9450979
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 171      ggtggtggaggctgtcgagccggc 194
                ||||| ||||||||||||||||||
Sbjct: 25434536 ggtgggggaggctgtcgagccggc 25434559
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>gb|AC109602.6| Oryza sativa chromosome 3 BAC OSJNBa0087M10 genomic sequence, complete
             sequence
          Length = 167397

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 163   gcgccggcggtggtggaggc 182
             ||||||||||||||||||||
Sbjct: 41543 gcgccggcggtggtggaggc 41562
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>gb|AC090874.9| Oryza sativa chromosome 3 BAC OJ1523_A02 genomic sequence, complete
              sequence
          Length = 132987

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 163    gcgccggcggtggtggaggc 182
              ||||||||||||||||||||
Sbjct: 118123 gcgccggcggtggtggaggc 118142
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>dbj|AB040951.2| Homo sapiens mRNA for KIAA1518 protein, partial cds
          Length = 5156

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 177 ggaggctgtcgagccggccg 196
           ||||||||||||||||||||
Sbjct: 787 ggaggctgtcgagccggccg 768
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>gb|BC098312.1| Homo sapiens ankyrin repeat domain 25, mRNA (cDNA clone MGC:119707
           IMAGE:40012032), complete cds
          Length = 2740

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 177 ggaggctgtcgagccggccg 196
           ||||||||||||||||||||
Sbjct: 587 ggaggctgtcgagccggccg 568
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>dbj|AP003609.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0012B02
          Length = 149807

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 235    gtcgagccggccgtcgtcgc 254
              ||||||||||||||||||||
Sbjct: 106215 gtcgagccggccgtcgtcgc 106234
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>dbj|AP004192.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1643_A10
          Length = 130037

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 171   ggtggtggaggctgtcgagccggc 194
             ||||| ||||||||||||||||||
Sbjct: 90198 ggtgggggaggctgtcgagccggc 90221
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>dbj|AK000011.1| Homo sapiens cDNA FLJ20004 fis, clone ADKA02391
          Length = 1826

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 177 ggaggctgtcgagccggccg 196
           ||||||||||||||||||||
Sbjct: 650 ggaggctgtcgagccggccg 631
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>dbj|AP005467.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OJ1349_D05
          Length = 174478

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 247    gtcgtcgcggtcgaggaggc 266
              ||||||||||||||||||||
Sbjct: 161817 gtcgtcgcggtcgaggaggc 161798
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>dbj|AP003940.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1066_B03
          Length = 115339

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 247   gtcgtcgcggtcgaggaggc 266
             ||||||||||||||||||||
Sbjct: 70578 gtcgtcgcggtcgaggaggc 70559
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>ref|XM_320740.2| Anopheles gambiae str. PEST ENSANGP00000020132 (ENSANGG00000017643),
            partial mRNA
          Length = 4839

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 235  gtcgagccggccgtcgtcgc 254
            ||||||||||||||||||||
Sbjct: 4472 gtcgagccggccgtcgtcgc 4453
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>gb|BC098286.1| Homo sapiens ankyrin repeat domain 25, mRNA (cDNA clone MGC:119708
           IMAGE:40012033), complete cds
          Length = 2740

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 177 ggaggctgtcgagccggccg 196
           ||||||||||||||||||||
Sbjct: 587 ggaggctgtcgagccggccg 568
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>gb|BC098105.1| Homo sapiens ankyrin repeat domain 25, mRNA (cDNA clone MGC:119706
           IMAGE:40012030), complete cds
          Length = 2740

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 177 ggaggctgtcgagccggccg 196
           ||||||||||||||||||||
Sbjct: 587 ggaggctgtcgagccggccg 568
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>gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence
          Length = 3131724

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 243     ggccgtcgtcgcggtcgagg 262
               ||||||||||||||||||||
Sbjct: 1940186 ggccgtcgtcgcggtcgagg 1940205
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>dbj|AK067128.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013098G17, full
           insert sequence
          Length = 2791

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 162 ggcgccggcggtggtggagg 181
           ||||||||||||||||||||
Sbjct: 852 ggcgccggcggtggtggagg 871
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>dbj|AK058638.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-018-D08, full
           insert sequence
          Length = 1230

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 162 ggcgccggcggtggtggagg 181
           ||||||||||||||||||||
Sbjct: 111 ggcgccggcggtggtggagg 130
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>gb|BC085767.1| Rattus norvegicus FIP1 like 1 (S. cerevisiae), mRNA (cDNA clone
            MGC:93674 IMAGE:7192362), complete cds
          Length = 1925

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 524  cggaagctgcccctgccgag 543
            ||||||||||||||||||||
Sbjct: 1716 cggaagctgcccctgccgag 1735
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>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 234    cgtcgagccggccgtcgtcgcggt 257
              ||||||||||| ||||||||||||
Sbjct: 641084 cgtcgagccggacgtcgtcgcggt 641061
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>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome
          Length = 3551823

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 184    gtcgagccggccgtcgtcgttgtc 207
              |||||||||||||||| |||||||
Sbjct: 220109 gtcgagccggccgtcggcgttgtc 220132
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>emb|AL731609.2|OSJN00259 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0079M09,
             complete sequence
          Length = 187359

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 162   ggcgccggcggtggtggagg 181
             ||||||||||||||||||||
Sbjct: 99713 ggcgccggcggtggtggagg 99694
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>ref|NM_001008295.1| Rattus norvegicus FIP1 like 1 (S. cerevisiae) (Fip1l1), mRNA
          Length = 1925

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 524  cggaagctgcccctgccgag 543
            ||||||||||||||||||||
Sbjct: 1716 cggaagctgcccctgccgag 1735
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>dbj|AB018443.1| Oryza sativa (japonica cultivar-group) mRNA for nonphototrophic
            hypocotyl 1b, complete cds
          Length = 3134

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 162  ggcgccggcggtggtggagg 181
            ||||||||||||||||||||
Sbjct: 1208 ggcgccggcggtggtggagg 1227


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,917,182
Number of Sequences: 3902068
Number of extensions: 3917182
Number of successful extensions: 95965
Number of sequences better than 10.0: 78
Number of HSP's better than 10.0 without gapping: 82
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 93363
Number of HSP's gapped (non-prelim): 2602
length of query: 556
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 533
effective length of database: 17,143,297,704
effective search space: 9137377676232
effective search space used: 9137377676232
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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