ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart44b03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_191123.1| Oryza sativa (japonica cultivar-group), predic... 311 1e-81
2dbj|AK073299.1| Oryza sativa (japonica cultivar-group) cDNA clon... 311 1e-81
3gb|AY104288.1| Zea mays PCO074498 mRNA sequence 234 2e-58
4dbj|AK071486.1| Oryza sativa (japonica cultivar-group) cDNA clon... 198 1e-47
5dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 127 4e-26
6dbj|AP003218.6| Oryza sativa (japonica cultivar-group) genomic D... 127 4e-26
7gb|AF389849.1| Catharanthus roseus farnesyltransferase beta subu... 56 1e-04
8gb|AY586550.1| Catharanthus roseus farnesyltransferase beta subu... 56 1e-04
9gb|U83708.1|LEU83708 Lycopersicon esculentum farnesyl protein tr... 50 0.008
10gb|U73203.1|NGU73203 Nicotiana glutinosa farnesyltransferase bet... 50 0.008
11gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 44 0.48
12gb|L08664.1|PEABFARNES Pea farnesyltransferase beta-subunit mRNA... 44 0.48
13gb|AC097176.3| Oryza sativa (japonica cultivar-group) chromosome... 42 1.9
14ref|XM_801945.1| Trypanosoma cruzi strain CL Brener hypothetical... 42 1.9
15emb|AL365502.57| Human DNA sequence from clone RP11-48C7 on chro... 42 1.9
16emb|AL832856.1|HSM804167 Homo sapiens mRNA; cDNA DKFZp667P1625 (... 42 1.9
17dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.9
18gb|AE005674.1| Shigella flexneri 2a str. 301, complete genome 40 7.6
19gb|AC144740.3| Oryza sativa (japonica cultivar-group) chromosome... 40 7.6
20gb|AC109596.3| Oryza sativa (japonica cultivar-group) chromosome... 40 7.6
21ref|XM_361642.1| Magnaporthe grisea 70-15 hypothetical protein (... 40 7.6
22ref|XM_424982.1| PREDICTED: Gallus gallus similar to mKIAA1045 p... 40 7.6
23ref|XM_877044.1| PREDICTED: Bos taurus similar to protein tyrosi... 40 7.6
24ref|XM_876998.1| PREDICTED: Bos taurus similar to protein tyrosi... 40 7.6
25ref|XM_876946.1| PREDICTED: Bos taurus similar to protein tyrosi... 40 7.6
26ref|XM_876882.1| PREDICTED: Bos taurus similar to protein tyrosi... 40 7.6
27ref|XM_876819.1| PREDICTED: Bos taurus similar to protein tyrosi... 40 7.6
28ref|XM_876758.1| PREDICTED: Bos taurus similar to protein tyrosi... 40 7.6
29ref|XM_865680.1| PREDICTED: Bos taurus similar to protein tyrosi... 40 7.6
30ref|XM_876647.1| PREDICTED: Bos taurus similar to protein tyrosi... 40 7.6
31ref|XM_876584.1| PREDICTED: Bos taurus similar to protein tyrosi... 40 7.6
32ref|XM_876527.1| PREDICTED: Bos taurus similar to protein tyrosi... 40 7.6
33ref|XM_876344.1| PREDICTED: Bos taurus similar to protein tyrosi... 40 7.6
34ref|XM_876214.1| PREDICTED: Bos taurus similar to protein tyrosi... 40 7.6
35ref|XM_876156.1| PREDICTED: Bos taurus similar to protein tyrosi... 40 7.6
36ref|XM_876092.1| PREDICTED: Bos taurus similar to protein tyrosi... 40 7.6
37ref|XM_875736.1| PREDICTED: Bos taurus similar to protein tyrosi... 40 7.6
38ref|XM_875662.1| PREDICTED: Bos taurus similar to protein tyrosi... 40 7.6
39ref|XM_875443.1| PREDICTED: Bos taurus similar to protein tyrosi... 40 7.6
40ref|XM_611916.2| PREDICTED: Bos taurus similar to protein tyrosi... 40 7.6
41ref|XM_875297.1| PREDICTED: Bos taurus similar to protein tyrosi... 40 7.6
42gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome 40 7.6
43gb|AE014075.1| Escherichia coli CFT073, complete genome 40 7.6
44gb|CP000243.1| Escherichia coli UTI89, complete genome 40 7.6
45emb|AL929554.20| Human DNA sequence from clone RP11-350O14 on ch... 40 7.6
46gb|U00096.2| Escherichia coli K-12 MG1655, complete genome 40 7.6
47gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete ... 40 7.6
48ref|XM_778830.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 7.6
49emb|Y10307.1|ECFMTSUNT E.coli fmt, sun and trkA genes 40 7.6
50emb|X77091.1|ECFMUV E.coli fms, fmt, fmu, fmv, smf, smg and trkA... 40 7.6
51emb|X63666.1|ECFMT E.coli fmt gene for L-methionyl-tRNAMetf N-fo... 40 7.6
52emb|X15028.1|GGHSP905 Chicken hsp90 gene for 90 kDa-heat shock p... 40 7.6
53gb|AC104322.4| Oryza sativa chromosome 10 BAC OSJNBb0005F01 geno... 40 7.6
54gb|AC105377.12| Oryza sativa chromosome 10 BAC OSJNBa0034E15 gen... 40 7.6
55emb|BX294144.1| Pirellula sp. strain 1 complete genome; segment ... 40 7.6
56gb|AC018529.12| Homo sapiens, clone RP11-4B16, complete sequence 40 7.6
57gb|AC100863.2| Homo sapiens chromosome 18, clone RP11-751H17, co... 40 7.6
58dbj|AP009048.1| Escherichia coli W3110 DNA, complete genome 40 7.6
59dbj|AK133763.1| Mus musculus 8 days embryo whole body cDNA, RIKE... 40 7.6
60emb|AL113553.1|CNS01AYH Botrytis cinerea strain T4 cDNA library 40 7.6
61dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.6
62dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.6
63gb|BC095013.1| Danio rerio preproinsulin, mRNA (cDNA clone MGC:1... 40 7.6
64emb|BX465852.6| Zebrafish DNA sequence from clone CH211-139A5 in... 40 7.6
65dbj|AP004672.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.6
66dbj|AP004223.2| Oryza sativa (japonica cultivar-group) genomic D... 40 7.6
67emb|AL935065.7| Zebrafish DNA sequence from clone CH211-69I14 in... 40 7.6
68gb|AE014073.1| Shigella flexneri 2a str. 2457T, complete genome 40 7.6
69ref|XM_238069.3| PREDICTED: Rattus norvegicus similar to Hnrpa3 ... 40 7.6
70gb|AE005027.1| Halobacterium sp. NRC-1 section 58 of 170 of the ... 40 7.6
71gb|AY106146.1| Zea mays PCO074795 mRNA sequence 40 7.6
72gb|U18997.1|ECOUW67 Escherichia coli K-12 chromosomal region fro... 40 7.6
73gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, co... 40 7.6
74gb|AY858636.1| Brasenia schreberi 18S ribosomal RNA gene, partia... 40 7.6
75gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 7.6
76gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 7.6
77emb|AL954364.5|CNS08CCZ Oryza sativa chromosome 12, . BAC OSJNBa... 40 7.6
78emb|AL928755.5|CNS08CBS Oryza sativa chromosome 12, . BAC OSJNBb... 40 7.6
79gb|AE005174.2| Escherichia coli O157:H7 EDL933, complete genome 40 7.6
80dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, comp... 40 7.6
81dbj|BA000007.2| Escherichia coli O157:H7 DNA, complete genome 40 7.6
82gb|CP000034.1| Shigella dysenteriae Sd197, complete genome 40 7.6
83gb|CP000036.1| Shigella boydii Sb227, complete genome 40 7.6
84dbj|AB022738.1| Brasenia schreberi genes for ITS1, 5.8S rRNA and... 40 7.6 
>ref|NM_191123.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1620

 Score =  311 bits (157), Expect = 1e-81
 Identities = 327/383 (85%), Gaps = 3/383 (0%)
 Strand = Plus / Plus

                                                                       
Query: 176 ggccgcggagctgccccggctcaccgtgacgcaggtggagcagatgaaggtggaggcgcg 235
           |||||| |||||||||||||| || |||||||||||||||||||||||||||||||||  
Sbjct: 255 ggccgctgagctgccccggctgactgtgacgcaggtggagcagatgaaggtggaggcgaa 314

                                                                       
Query: 236 ggtagccgacatctaccgcgtcctcttcgacgccgcgcccaacgccaagtccgccgtgct 295
           ||| | ||| ||||||||||||||||||| |  ||||||||||||||| |||  | || |
Sbjct: 315 ggtgggcgaaatctaccgcgtcctcttcggcaacgcgcccaacgccaattccctcatgtt 374

                                                                       
Query: 296 ggagctctggcgcgatcagcatgtcgagtatttgacgaaagggctgaggcatcttgcacc 355
            ||||| ||||| || |||||||| ||||||||||||| ||||||||  ||||||| |||
Sbjct: 375 agagctgtggcgtgagcagcatgttgagtatttgacgagagggctgaaacatcttggacc 434

                                                                       
Query: 356 tagcttccatgtgctcgatgccaaccgaccttggttatgctattggatggttcatgggct 415
            ||||||||||||||||||||||| ||||||||| | ||||| |||||  ||||||  ||
Sbjct: 435 aagcttccatgtgctcgatgccaatcgaccttggctgtgctactggattattcatgcact 494

                                                                       
Query: 416 tgcattgctggatgaaacgcttgacgatgacctcgagaacgatattgtggacttcttgtc 475
           |||  || |||||||||  | ||||||||   | ||| | ||||||||||||||||| ||
Sbjct: 495 tgctctgttggatgaaatacctgacgatg---ttgaggatgatattgtggacttcttatc 551

                                                                       
Query: 476 tcgatgccaggacaaacatggtggatatggtggtggacctgggcagttacctcatctcgc 535
           |||||| ||||||||| ||||||| ||||| || |||||||| ||||| |||||||||||
Sbjct: 552 tcgatgtcaggacaaagatggtggttatggcggaggacctggacagttgcctcatctcgc 611

                                  
Query: 536 tacatcgtatgctgctgtaaata 558
           |||| | ||||||||||||||||
Sbjct: 612 tacaacttatgctgctgtaaata 634
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>dbj|AK073299.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033029E14, full
           insert sequence
          Length = 1596

 Score =  311 bits (157), Expect = 1e-81
 Identities = 327/383 (85%), Gaps = 3/383 (0%)
 Strand = Plus / Plus

                                                                       
Query: 176 ggccgcggagctgccccggctcaccgtgacgcaggtggagcagatgaaggtggaggcgcg 235
           |||||| |||||||||||||| || |||||||||||||||||||||||||||||||||  
Sbjct: 173 ggccgctgagctgccccggctgactgtgacgcaggtggagcagatgaaggtggaggcgaa 232

                                                                       
Query: 236 ggtagccgacatctaccgcgtcctcttcgacgccgcgcccaacgccaagtccgccgtgct 295
           ||| | ||| ||||||||||||||||||| |  ||||||||||||||| |||  | || |
Sbjct: 233 ggtgggcgaaatctaccgcgtcctcttcggcaacgcgcccaacgccaattccctcatgtt 292

                                                                       
Query: 296 ggagctctggcgcgatcagcatgtcgagtatttgacgaaagggctgaggcatcttgcacc 355
            ||||| ||||| || |||||||| ||||||||||||| ||||||||  ||||||| |||
Sbjct: 293 agagctgtggcgtgagcagcatgttgagtatttgacgagagggctgaaacatcttggacc 352

                                                                       
Query: 356 tagcttccatgtgctcgatgccaaccgaccttggttatgctattggatggttcatgggct 415
            ||||||||||||||||||||||| ||||||||| | ||||| |||||  ||||||  ||
Sbjct: 353 aagcttccatgtgctcgatgccaatcgaccttggctgtgctactggattattcatgcact 412

                                                                       
Query: 416 tgcattgctggatgaaacgcttgacgatgacctcgagaacgatattgtggacttcttgtc 475
           |||  || |||||||||  | ||||||||   | ||| | ||||||||||||||||| ||
Sbjct: 413 tgctctgttggatgaaatacctgacgatg---ttgaggatgatattgtggacttcttatc 469

                                                                       
Query: 476 tcgatgccaggacaaacatggtggatatggtggtggacctgggcagttacctcatctcgc 535
           |||||| ||||||||| ||||||| ||||| || |||||||| ||||| |||||||||||
Sbjct: 470 tcgatgtcaggacaaagatggtggttatggcggaggacctggacagttgcctcatctcgc 529

                                  
Query: 536 tacatcgtatgctgctgtaaata 558
           |||| | ||||||||||||||||
Sbjct: 530 tacaacttatgctgctgtaaata 552
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>gb|AY104288.1| Zea mays PCO074498 mRNA sequence
          Length = 1820

 Score =  234 bits (118), Expect = 2e-58
 Identities = 304/366 (83%)
 Strand = Plus / Plus

                                                                       
Query: 193 ggctcaccgtgacgcaggtggagcagatgaaggtggaggcgcgggtagccgacatctacc 252
           ||||||| ||||||||||||||||||||||||||||||||  |||| | |||||||||||
Sbjct: 166 ggctcacggtgacgcaggtggagcagatgaaggtggaggccagggttggcgacatctacc 225

                                                                       
Query: 253 gcgtcctcttcgacgccgcgcccaacgccaagtccgccgtgctggagctctggcgcgatc 312
           ||  ||||||||  |||||||||||| | || |||  | |||| ||||| ||||| ||||
Sbjct: 226 gctccctcttcggggccgcgcccaacacgaaatccatcatgctagagctgtggcgtgatc 285

                                                                       
Query: 313 agcatgtcgagtatttgacgaaagggctgaggcatcttgcacctagcttccatgtgctcg 372
           ||||| |||||||| |||||   |||||||||||| | | |||   ||| ||||| || |
Sbjct: 286 agcatatcgagtatctgacgcctgggctgaggcatatgggaccagcctttcatgttctag 345

                                                                       
Query: 373 atgccaaccgaccttggttatgctattggatggttcatgggcttgcattgctggatgaaa 432
           ||||||| || |||||| ||||||| ||||||||||||   ||||| |||||||||||| 
Sbjct: 346 atgccaatcgcccttggctatgctactggatggttcatccacttgctttgctggatgaag 405

                                                                       
Query: 433 cgcttgacgatgacctcgagaacgatattgtggacttcttgtctcgatgccaggacaaac 492
           | ||||| ||||| || ||||| |||||  | ||||||||  ||||||| ||||| ||| 
Sbjct: 406 cacttgatgatgatcttgagaatgatatcatagacttcttagctcgatgtcaggataaag 465

                                                                       
Query: 493 atggtggatatggtggtggacctgggcagttacctcatctcgctacatcgtatgctgctg 552
           ||||||||||| ||||||||||||| ||||| ||||| || |||||  | ||||||||||
Sbjct: 466 atggtggatatagtggtggacctggacagttgcctcacctagctacgacttatgctgctg 525

                 
Query: 553 taaata 558
           ||||||
Sbjct: 526 taaata 531
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>dbj|AK071486.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023095H23, full
           insert sequence
          Length = 2713

 Score =  198 bits (100), Expect = 1e-47
 Identities = 178/204 (87%)
 Strand = Plus / Plus

                                                                       
Query: 176 ggccgcggagctgccccggctcaccgtgacgcaggtggagcagatgaaggtggaggcgcg 235
           |||||| |||||||||||||| || |||||||||||||||||||||||||||||||||  
Sbjct: 175 ggccgctgagctgccccggctgactgtgacgcaggtggagcagatgaaggtggaggcgaa 234

                                                                       
Query: 236 ggtagccgacatctaccgcgtcctcttcgacgccgcgcccaacgccaagtccgccgtgct 295
           ||| | ||| ||||||||||||||||||| |  ||||||||||||||| |||  | || |
Sbjct: 235 ggtgggcgaaatctaccgcgtcctcttcggcaacgcgcccaacgccaattccctcatgtt 294

                                                                       
Query: 296 ggagctctggcgcgatcagcatgtcgagtatttgacgaaagggctgaggcatcttgcacc 355
            ||||| ||||| || |||||||| ||||||||||||| ||||||||  ||||||| |||
Sbjct: 295 agagctgtggcgtgagcagcatgttgagtatttgacgagagggctgaaacatcttggacc 354

                                   
Query: 356 tagcttccatgtgctcgatgccaa 379
            |||||||||||||||||||||||
Sbjct: 355 aagcttccatgtgctcgatgccaa 378



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                   
Query: 520  agttacctcatctcgctacatcgtatgctgctgtaaata 558
            |||| ||||||||||||||| | ||||||||||||||||
Sbjct: 1539 agttgcctcatctcgctacaacttatgctgctgtaaata 1577



 Score = 46.1 bits (23), Expect = 0.12
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 456 gatattgtggacttcttgtctcgatgccagg 486
           ||||||||||||||||| |||||||| ||||
Sbjct: 551 gatattgtggacttcttatctcgatgtcagg 581
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  127 bits (64), Expect = 4e-26
 Identities = 97/108 (89%)
 Strand = Plus / Minus

                                                                            
Query: 176      ggccgcggagctgccccggctcaccgtgacgcaggtggagcagatgaaggtggaggcgcg 235
                |||||| |||||||||||||| || |||||||||||||||||||||||||||||||||  
Sbjct: 30772326 ggccgctgagctgccccggctgactgtgacgcaggtggagcagatgaaggtggaggcgaa 30772267

                                                                
Query: 236      ggtagccgacatctaccgcgtcctcttcgacgccgcgcccaacgccaa 283
                ||| | ||| ||||||||||||||||||| |  |||||||||||||||
Sbjct: 30772266 ggtgggcgaaatctaccgcgtcctcttcggcaacgcgcccaacgccaa 30772219



 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 74/83 (89%)
 Strand = Plus / Minus

                                                                            
Query: 297      gagctctggcgcgatcagcatgtcgagtatttgacgaaagggctgaggcatcttgcacct 356
                ||||| ||||| || |||||||| ||||||||||||| ||||||||  ||||||| ||| 
Sbjct: 30771895 gagctgtggcgtgagcagcatgttgagtatttgacgagagggctgaaacatcttggacca 30771836

                                       
Query: 357      agcttccatgtgctcgatgccaa 379
                |||||||||||||||||||||||
Sbjct: 30771835 agcttccatgtgctcgatgccaa 30771813



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 36/39 (92%)
 Strand = Plus / Minus

                                                       
Query: 520      agttacctcatctcgctacatcgtatgctgctgtaaata 558
                |||| ||||||||||||||| | ||||||||||||||||
Sbjct: 30770652 agttgcctcatctcgctacaacttatgctgctgtaaata 30770614



 Score = 46.1 bits (23), Expect = 0.12
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                               
Query: 456      gatattgtggacttcttgtctcgatgccagg 486
                ||||||||||||||||| |||||||| ||||
Sbjct: 30771640 gatattgtggacttcttatctcgatgtcagg 30771610



 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 127      cgcagccgcagccgcctccc 146
                ||||||||||||||||||||
Sbjct: 40482172 cgcagccgcagccgcctccc 40482153
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>dbj|AP003218.6| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBb0021A09
          Length = 127973

 Score =  127 bits (64), Expect = 4e-26
 Identities = 97/108 (89%)
 Strand = Plus / Minus

                                                                         
Query: 176   ggccgcggagctgccccggctcaccgtgacgcaggtggagcagatgaaggtggaggcgcg 235
             |||||| |||||||||||||| || |||||||||||||||||||||||||||||||||  
Sbjct: 61601 ggccgctgagctgccccggctgactgtgacgcaggtggagcagatgaaggtggaggcgaa 61542

                                                             
Query: 236   ggtagccgacatctaccgcgtcctcttcgacgccgcgcccaacgccaa 283
             ||| | ||| ||||||||||||||||||| |  |||||||||||||||
Sbjct: 61541 ggtgggcgaaatctaccgcgtcctcttcggcaacgcgcccaacgccaa 61494



 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 74/83 (89%)
 Strand = Plus / Minus

                                                                         
Query: 297   gagctctggcgcgatcagcatgtcgagtatttgacgaaagggctgaggcatcttgcacct 356
             ||||| ||||| || |||||||| ||||||||||||| ||||||||  ||||||| ||| 
Sbjct: 61170 gagctgtggcgtgagcagcatgttgagtatttgacgagagggctgaaacatcttggacca 61111

                                    
Query: 357   agcttccatgtgctcgatgccaa 379
             |||||||||||||||||||||||
Sbjct: 61110 agcttccatgtgctcgatgccaa 61088



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 36/39 (92%)
 Strand = Plus / Minus

                                                    
Query: 520   agttacctcatctcgctacatcgtatgctgctgtaaata 558
             |||| ||||||||||||||| | ||||||||||||||||
Sbjct: 59927 agttgcctcatctcgctacaacttatgctgctgtaaata 59889



 Score = 46.1 bits (23), Expect = 0.12
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                            
Query: 456   gatattgtggacttcttgtctcgatgccagg 486
             ||||||||||||||||| |||||||| ||||
Sbjct: 60915 gatattgtggacttcttatctcgatgtcagg 60885
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>gb|AF389849.1| Catharanthus roseus farnesyltransferase beta subunit (FTB) mRNA,
           complete cds
          Length = 1855

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 37/40 (92%)
 Strand = Plus / Plus

                                                   
Query: 493 atggtggatatggtggtggacctgggcagttacctcatct 532
           |||||||||||||||| |||||||| ||||| ||||||||
Sbjct: 466 atggtggatatggtggcggacctggtcagttgcctcatct 505
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>gb|AY586550.1| Catharanthus roseus farnesyltransferase beta subunit (FTB)
           precursor RNA, complete cds
          Length = 1966

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 37/40 (92%)
 Strand = Plus / Plus

                                                   
Query: 493 atggtggatatggtggtggacctgggcagttacctcatct 532
           |||||||||||||||| |||||||| ||||| ||||||||
Sbjct: 587 atggtggatatggtggcggacctggtcagttgcctcatct 626
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>gb|U83708.1|LEU83708 Lycopersicon esculentum farnesyl protein transferase subunit B
           (LeFTB) mRNA, complete cds
          Length = 1832

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                
Query: 480 tgccaggacaaacatggtggatatggtggtggacctgggcagttacctcatct 532
           |||||||| ||| ||||||| ||||| ||||||||||| ||| | ||||||||
Sbjct: 369 tgccaggataaagatggtggctatggaggtggacctggtcagatgcctcatct 421
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>gb|U73203.1|NGU73203 Nicotiana glutinosa farnesyltransferase beta subunit mRNA, partial
           cds
          Length = 1449

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                
Query: 480 tgccaggacaaacatggtggatatggtggtggacctgggcagttacctcatct 532
           ||||||||  || ||||||| ||||||||||||||||| ||| | ||||||||
Sbjct: 286 tgccaggatgaagatggtggctatggtggtggacctggtcagatgcctcatct 338
to top
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 83     gcctccgcccgcctccgccgcg 104
              ||||||||||||||||||||||
Sbjct: 725714 gcctccgcccgcctccgccgcg 725735
to top
>gb|L08664.1|PEABFARNES Pea farnesyltransferase beta-subunit mRNA, complete cds
          Length = 1648

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 49/58 (84%)
 Strand = Plus / Plus

                                                                     
Query: 493 atggtggatatggtggtggacctgggcagttacctcatctcgctacatcgtatgctgc 550
           |||||||||||| ||| |||||||| ||| | |||||||| || ||| | ||||||||
Sbjct: 329 atggtggatatgctgggggacctggtcagatgcctcatcttgccacaacttatgctgc 386
to top
>gb|AC097176.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1576_F01,
             complete sequence
          Length = 119525

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 77    cggccagcctccgcccgcctccgcc 101
             ||||||||||||||||||| |||||
Sbjct: 78291 cggccagcctccgcccgccgccgcc 78315
to top
>ref|XM_801945.1| Trypanosoma cruzi strain CL Brener hypothetical protein
           (Tc00.1047053503971.20) partial mRNA
          Length = 834

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 211 tggagcagatgaaggtggagg 231
           |||||||||||||||||||||
Sbjct: 662 tggagcagatgaaggtggagg 682
to top
>emb|AL365502.57| Human DNA sequence from clone RP11-48C7 on chromosome 9q34.2-34.3
             Contains the gene for nasal embryonic luteinizing
             hormone-releasing hormone factor (DKFZP586J1624), a novel
             gene (FLJ31318), the MRPL41 gene for mitochondrial
             ribosomal protein L41 (RPML27, MRP-L270), a novel gene
             (LOC9271), the gene for melanin-concentrating hormone
             receptor 1 interacting zinc-finger protein (ZMYND17)
             (MIZIP), a novel gene (MGC40555), a novel protein and
             eleven CpG islands, complete sequence
          Length = 174995

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 83    gcctccgcccgcctccgccgc 103
             |||||||||||||||||||||
Sbjct: 16839 gcctccgcccgcctccgccgc 16859
to top
>emb|AL832856.1|HSM804167 Homo sapiens mRNA; cDNA DKFZp667P1625 (from clone DKFZp667P1625)
          Length = 5327

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 83   gcctccgcccgcctccgccgc 103
            |||||||||||||||||||||
Sbjct: 3280 gcctccgcccgcctccgccgc 3260
to top
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 77       cggccagcctccgcccgcctccgcc 101
                ||||||||||||||||||| |||||
Sbjct: 22029805 cggccagcctccgcccgccgccgcc 22029829



 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 218      gatgaaggtggaggcgcggg 237
                ||||||||||||||||||||
Sbjct: 25910545 gatgaaggtggaggcgcggg 25910526
to top
>gb|AE005674.1| Shigella flexneri 2a str. 301, complete genome
          Length = 4607203

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 412     ggcttgcattgctggatgaa 431
               ||||||||||||||||||||
Sbjct: 3418594 ggcttgcattgctggatgaa 3418613
to top
>gb|AC144740.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0075A10,
              complete sequence
          Length = 171101

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 218    gatgaaggtggaggcgcggg 237
              ||||||||||||||||||||
Sbjct: 152077 gatgaaggtggaggcgcggg 152058
to top
>gb|AC109596.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1593_C11,
             complete sequence
          Length = 112065

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 218   gatgaaggtggaggcgcggg 237
             ||||||||||||||||||||
Sbjct: 14773 gatgaaggtggaggcgcggg 14754
to top
>ref|XM_361642.1| Magnaporthe grisea 70-15 hypothetical protein (MG04116.4) partial
            mRNA
          Length = 3858

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 205  cgcaggtggagcagatgaaggtgg 228
            ||||||||||| ||||||||||||
Sbjct: 2421 cgcaggtggaggagatgaaggtgg 2398
to top
>ref|XM_424982.1| PREDICTED: Gallus gallus similar to mKIAA1045 protein (LOC427408),
           mRNA
          Length = 1938

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 80  ccagcctccgcccgcctccg 99
           ||||||||||||||||||||
Sbjct: 367 ccagcctccgcccgcctccg 348
to top
>ref|XM_877044.1| PREDICTED: Bos taurus similar to protein tyrosine phosphatase,
            receptor type, D isoform 2 precursor, transcript variant
            31 (LOC532751), mRNA
          Length = 6016

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 37   aaggagacggagctcgcagc 56
            ||||||||||||||||||||
Sbjct: 2543 aaggagacggagctcgcagc 2562
to top
>ref|XM_876998.1| PREDICTED: Bos taurus similar to protein tyrosine phosphatase,
            receptor type, D isoform 2 precursor, transcript variant
            30 (LOC532751), mRNA
          Length = 6007

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 37   aaggagacggagctcgcagc 56
            ||||||||||||||||||||
Sbjct: 2534 aaggagacggagctcgcagc 2553
to top
>ref|XM_876946.1| PREDICTED: Bos taurus similar to protein tyrosine phosphatase,
            receptor type, D isoform 2 precursor, transcript variant
            29 (LOC532751), mRNA
          Length = 5986

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 37   aaggagacggagctcgcagc 56
            ||||||||||||||||||||
Sbjct: 2513 aaggagacggagctcgcagc 2532
to top
>ref|XM_876882.1| PREDICTED: Bos taurus similar to protein tyrosine phosphatase,
            receptor type, D isoform 2 precursor, transcript variant
            28 (LOC532751), mRNA
          Length = 5998

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 37   aaggagacggagctcgcagc 56
            ||||||||||||||||||||
Sbjct: 2525 aaggagacggagctcgcagc 2544
to top
>ref|XM_876819.1| PREDICTED: Bos taurus similar to protein tyrosine phosphatase,
            receptor type, D isoform 2 precursor, transcript variant
            27 (LOC532751), mRNA
          Length = 6049

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 37   aaggagacggagctcgcagc 56
            ||||||||||||||||||||
Sbjct: 2576 aaggagacggagctcgcagc 2595
to top
>ref|XM_876758.1| PREDICTED: Bos taurus similar to protein tyrosine phosphatase,
            receptor type, D isoform 2 precursor, transcript variant
            26 (LOC532751), mRNA
          Length = 6013

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 37   aaggagacggagctcgcagc 56
            ||||||||||||||||||||
Sbjct: 2540 aaggagacggagctcgcagc 2559
to top
>ref|XM_865680.1| PREDICTED: Bos taurus similar to protein tyrosine phosphatase,
            receptor type, D isoform 2 precursor, transcript variant
            3 (LOC532751), mRNA
          Length = 6055

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 37   aaggagacggagctcgcagc 56
            ||||||||||||||||||||
Sbjct: 2582 aaggagacggagctcgcagc 2601
to top
>ref|XM_876647.1| PREDICTED: Bos taurus similar to protein tyrosine phosphatase,
            receptor type, D isoform 2 precursor, transcript variant
            25 (LOC532751), mRNA
          Length = 6043

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 37   aaggagacggagctcgcagc 56
            ||||||||||||||||||||
Sbjct: 2570 aaggagacggagctcgcagc 2589
to top
>ref|XM_876584.1| PREDICTED: Bos taurus similar to protein tyrosine phosphatase,
            receptor type, D isoform 2 precursor, transcript variant
            24 (LOC532751), mRNA
          Length = 6037

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 37   aaggagacggagctcgcagc 56
            ||||||||||||||||||||
Sbjct: 2564 aaggagacggagctcgcagc 2583
to top
>ref|XM_876527.1| PREDICTED: Bos taurus similar to protein tyrosine phosphatase,
            receptor type, D isoform 2 precursor, transcript variant
            23 (LOC532751), mRNA
          Length = 6076

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 37   aaggagacggagctcgcagc 56
            ||||||||||||||||||||
Sbjct: 2603 aaggagacggagctcgcagc 2622
to top
>ref|XM_876344.1| PREDICTED: Bos taurus similar to protein tyrosine phosphatase,
            receptor type, D isoform 2 precursor, transcript variant
            20 (LOC532751), mRNA
          Length = 5995

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 37   aaggagacggagctcgcagc 56
            ||||||||||||||||||||
Sbjct: 2513 aaggagacggagctcgcagc 2532
to top
>ref|XM_876214.1| PREDICTED: Bos taurus similar to protein tyrosine phosphatase,
            receptor type, D isoform 2 precursor, transcript variant
            18 (LOC532751), mRNA
          Length = 6028

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 37   aaggagacggagctcgcagc 56
            ||||||||||||||||||||
Sbjct: 2513 aaggagacggagctcgcagc 2532
to top
>ref|XM_876156.1| PREDICTED: Bos taurus similar to protein tyrosine phosphatase,
            receptor type, D isoform 2 precursor, transcript variant
            17 (LOC532751), mRNA
          Length = 6010

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 37   aaggagacggagctcgcagc 56
            ||||||||||||||||||||
Sbjct: 2528 aaggagacggagctcgcagc 2547
to top
>ref|XM_876092.1| PREDICTED: Bos taurus similar to protein tyrosine phosphatase,
            receptor type, D isoform 2 precursor, transcript variant
            16 (LOC532751), mRNA
          Length = 5893

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 37   aaggagacggagctcgcagc 56
            ||||||||||||||||||||
Sbjct: 2411 aaggagacggagctcgcagc 2430
to top
>ref|XM_875736.1| PREDICTED: Bos taurus similar to protein tyrosine phosphatase,
            receptor type, D isoform 2 precursor, transcript variant
            11 (LOC532751), mRNA
          Length = 6052

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 37   aaggagacggagctcgcagc 56
            ||||||||||||||||||||
Sbjct: 2540 aaggagacggagctcgcagc 2559
to top
>ref|XM_875662.1| PREDICTED: Bos taurus similar to protein tyrosine phosphatase,
            receptor type, D isoform 2 precursor, transcript variant
            10 (LOC532751), mRNA
          Length = 6118

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 37   aaggagacggagctcgcagc 56
            ||||||||||||||||||||
Sbjct: 2594 aaggagacggagctcgcagc 2613
to top
>ref|XM_875443.1| PREDICTED: Bos taurus similar to protein tyrosine phosphatase,
            receptor type, D isoform 2 precursor, transcript variant
            7 (LOC532751), mRNA
          Length = 4732

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 37   aaggagacggagctcgcagc 56
            ||||||||||||||||||||
Sbjct: 1811 aaggagacggagctcgcagc 1830
to top
>ref|XM_611916.2| PREDICTED: Bos taurus similar to protein tyrosine phosphatase,
            receptor type, D isoform 2 precursor, transcript variant
            1 (LOC532751), mRNA
          Length = 4169

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 37   aaggagacggagctcgcagc 56
            ||||||||||||||||||||
Sbjct: 1248 aaggagacggagctcgcagc 1267
to top
>ref|XM_875297.1| PREDICTED: Bos taurus similar to protein tyrosine phosphatase,
            receptor type, D isoform 2 precursor, transcript variant
            6 (LOC532751), mRNA
          Length = 6208

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 37   aaggagacggagctcgcagc 56
            ||||||||||||||||||||
Sbjct: 2714 aaggagacggagctcgcagc 2733
to top
>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome
          Length = 5650368

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 27    tcgtggccgcaaggagacgg 46
             ||||||||||||||||||||
Sbjct: 93399 tcgtggccgcaaggagacgg 93418
to top
>gb|AE014075.1| Escherichia coli CFT073, complete genome
          Length = 5231428

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 412     ggcttgcattgctggatgaa 431
               ||||||||||||||||||||
Sbjct: 3867142 ggcttgcattgctggatgaa 3867161
to top
>gb|CP000243.1| Escherichia coli UTI89, complete genome
          Length = 5065741

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 412     ggcttgcattgctggatgaa 431
               ||||||||||||||||||||
Sbjct: 3653576 ggcttgcattgctggatgaa 3653595
to top
>emb|AL929554.20| Human DNA sequence from clone RP11-350O14 on chromosome 9 Contains the
             3' end of the MAN1B1 gene for mannosidase alpha class 1B
             member 1, the DPP7 gene for dipeptidylpeptidase 7, the
             GRIN1 gene for glutamate receptor ionotropic N-methyl
             D-aspartate 1, a novel gene, the gene for
             anaphase-promoting complex subunit 2 (ANAPC2), the SSNA1
             gene for Sjogren's syndrome nuclear autoantigen 1, three
             novel genes (FLJ90254), a novel pseudogene, the 5' end of
             the gene for NADPH-dependent FMN and FAD containing
             oxidoreductase (NR1) and thirteen CpG islands, complete
             sequence
          Length = 119883

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 134   gcagccgcctcccgccgggg 153
             ||||||||||||||||||||
Sbjct: 50029 gcagccgcctcccgccgggg 50048
to top
>gb|U00096.2| Escherichia coli K-12 MG1655, complete genome
          Length = 4639675

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 412     ggcttgcattgctggatgaa 431
               ||||||||||||||||||||
Sbjct: 3433791 ggcttgcattgctggatgaa 3433810
to top
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence
          Length = 3806533

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 51      cgcagccgcggcacgcagcc 70
               ||||||||||||||||||||
Sbjct: 1111653 cgcagccgcggcacgcagcc 1111672
to top
>ref|XM_778830.1| PREDICTED: Strongylocentrotus purpuratus similar to heterogeneous
            nuclear ribonucleoprotein U-like 1 (LOC578672), mRNA
          Length = 4205

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 494  tggtggatatggtggtggac 513
            ||||||||||||||||||||
Sbjct: 2235 tggtggatatggtggtggac 2254
to top
>emb|Y10307.1|ECFMTSUNT E.coli fmt, sun and trkA genes
          Length = 1982

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 412  ggcttgcattgctggatgaa 431
            ||||||||||||||||||||
Sbjct: 1078 ggcttgcattgctggatgaa 1097
to top
>emb|X77091.1|ECFMUV E.coli fms, fmt, fmu, fmv, smf, smg and trkA genes
          Length = 5878

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 412  ggcttgcattgctggatgaa 431
            ||||||||||||||||||||
Sbjct: 3505 ggcttgcattgctggatgaa 3524
to top
>emb|X63666.1|ECFMT E.coli fmt gene for L-methionyl-tRNAMetf N-formyltransferase
          Length = 2256

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 412  ggcttgcattgctggatgaa 431
            ||||||||||||||||||||
Sbjct: 2133 ggcttgcattgctggatgaa 2152
to top
>emb|X15028.1|GGHSP905 Chicken hsp90 gene for 90 kDa-heat shock protein 5'-end
          Length = 2648

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 133  cgcagccgcctcccgccggg 152
            ||||||||||||||||||||
Sbjct: 1629 cgcagccgcctcccgccggg 1610
to top
>gb|AC104322.4| Oryza sativa chromosome 10 BAC OSJNBb0005F01 genomic sequence, complete
              sequence
          Length = 151428

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 87     ccgcccgcctccgccgcgcc 106
              ||||||||||||||||||||
Sbjct: 140374 ccgcccgcctccgccgcgcc 140355
to top
>gb|AC105377.12| Oryza sativa chromosome 10 BAC OSJNBa0034E15 genomic sequence,
            complete sequence
          Length = 100285

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 87   ccgcccgcctccgccgcgcc 106
            ||||||||||||||||||||
Sbjct: 2527 ccgcccgcctccgccgcgcc 2508
to top
>emb|BX294144.1| Pirellula sp. strain 1 complete genome; segment 12/24
          Length = 304850

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 419    attgctggatgaaacgcttg 438
              ||||||||||||||||||||
Sbjct: 278845 attgctggatgaaacgcttg 278826
to top
>gb|AC018529.12| Homo sapiens, clone RP11-4B16, complete sequence
          Length = 185590

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 271    cgcccaacgccaagtccgcc 290
              ||||||||||||||||||||
Sbjct: 116366 cgcccaacgccaagtccgcc 116347
to top
>gb|AC100863.2| Homo sapiens chromosome 18, clone RP11-751H17, complete sequence
          Length = 175527

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 271   cgcccaacgccaagtccgcc 290
             ||||||||||||||||||||
Sbjct: 26049 cgcccaacgccaagtccgcc 26030
to top
>dbj|AP009048.1| Escherichia coli W3110 DNA, complete genome
          Length = 4646332

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 412     ggcttgcattgctggatgaa 431
               ||||||||||||||||||||
Sbjct: 4204647 ggcttgcattgctggatgaa 4204628
to top
>dbj|AK133763.1| Mus musculus 8 days embryo whole body cDNA, RIKEN full-length
           enriched library, clone:5730408I02 product:golgi
           phosphoprotein 3, full insert sequence
          Length = 2656

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 127 cgcagccgcagccgcctcccgccg 150
           ||||||||| ||||||||||||||
Sbjct: 389 cgcagccgccgccgcctcccgccg 366
to top
>emb|AL113553.1|CNS01AYH Botrytis cinerea strain T4 cDNA library
          Length = 720

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 493 atggtggatatggtggtgga 512
           ||||||||||||||||||||
Sbjct: 14  atggtggatatggtggtgga 33
to top
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 88      cgcccgcctccgccgcgcct 107
               ||||||||||||||||||||
Sbjct: 2428711 cgcccgcctccgccgcgcct 2428692
to top
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
               sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 87      ccgcccgcctccgccgcgcc 106
               ||||||||||||||||||||
Sbjct: 6204969 ccgcccgcctccgccgcgcc 6204950
to top
>gb|BC095013.1| Danio rerio preproinsulin, mRNA (cDNA clone MGC:109842
           IMAGE:7014991), complete cds
          Length = 504

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 493 atggtggatatggtggtgga 512
           ||||||||||||||||||||
Sbjct: 23  atggtggatatggtggtgga 4
to top
>emb|BX465852.6| Zebrafish DNA sequence from clone CH211-139A5 in linkage group 5,
              complete sequence
          Length = 160041

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 493    atggtggatatggtggtgga 512
              ||||||||||||||||||||
Sbjct: 139425 atggtggatatggtggtgga 139444
to top
>dbj|AP004672.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0592G05
          Length = 146220

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 127    cgcagccgcagccgcctccc 146
              ||||||||||||||||||||
Sbjct: 133413 cgcagccgcagccgcctccc 133394
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>dbj|AP004223.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1033B05
          Length = 138882

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 127   cgcagccgcagccgcctccc 146
             ||||||||||||||||||||
Sbjct: 43796 cgcagccgcagccgcctccc 43777
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>emb|AL935065.7| Zebrafish DNA sequence from clone CH211-69I14 in linkage group 5,
              complete sequence
          Length = 167740

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 493    atggtggatatggtggtgga 512
              ||||||||||||||||||||
Sbjct: 118535 atggtggatatggtggtgga 118516
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>gb|AE014073.1| Shigella flexneri 2a str. 2457T, complete genome
          Length = 4599354

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 412     ggcttgcattgctggatgaa 431
               ||||||||||||||||||||
Sbjct: 3408769 ggcttgcattgctggatgaa 3408788
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>ref|XM_238069.3| PREDICTED: Rattus norvegicus similar to Hnrpa3 protein (LOC292273),
           mRNA
          Length = 1401

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 493 atggtggatatggtggtgga 512
           ||||||||||||||||||||
Sbjct: 879 atggtggatatggtggtgga 898
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>gb|AE005027.1| Halobacterium sp. NRC-1 section 58 of 170 of the complete genome
          Length = 12367

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 116   ctcgtcgcggacgcagccgc 135
             ||||||||||||||||||||
Sbjct: 11172 ctcgtcgcggacgcagccgc 11153
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>gb|AY106146.1| Zea mays PCO074795 mRNA sequence
          Length = 1342

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 131 gccgcagccgcctcccgccggggg 154
           ||||| ||||||||||||||||||
Sbjct: 242 gccgccgccgcctcccgccggggg 265
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>gb|U18997.1|ECOUW67 Escherichia coli K-12 chromosomal region from 67.4 to 76.0 minutes
          Length = 372438

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 412    ggcttgcattgctggatgaa 431
              ||||||||||||||||||||
Sbjct: 216516 ggcttgcattgctggatgaa 216535
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>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence
          Length = 2914771

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 87     ccgcccgcctccgccgcgcc 106
              ||||||||||||||||||||
Sbjct: 524586 ccgcccgcctccgccgcgcc 524567
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>gb|AY858636.1| Brasenia schreberi 18S ribosomal RNA gene, partial sequence;
           internal transcribed spacer 1, 5.8S ribosomal RNA gene,
           and internal transcribed spacer 2, complete sequence;
           and 26S ribosomal RNA gene, partial sequence
          Length = 718

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 27/28 (96%), Gaps = 1/28 (3%)
 Strand = Plus / Minus

                                       
Query: 72  agcgacggccag-cctccgcccgcctcc 98
           |||||||||||| |||||||||||||||
Sbjct: 542 agcgacggccagtcctccgcccgcctcc 515
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 87      ccgcccgcctccgccgcgcc 106
               ||||||||||||||||||||
Sbjct: 6206555 ccgcccgcctccgccgcgcc 6206536
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 88      cgcccgcctccgccgcgcct 107
               ||||||||||||||||||||
Sbjct: 2428655 cgcccgcctccgccgcgcct 2428636
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>emb|AL954364.5|CNS08CCZ Oryza sativa chromosome 12, . BAC OSJNBa0023M16 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 156258

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 88     cgcccgcctccgccgcgcct 107
              ||||||||||||||||||||
Sbjct: 153902 cgcccgcctccgccgcgcct 153883
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>emb|AL928755.5|CNS08CBS Oryza sativa chromosome 12, . BAC OSJNBb0050K10 of library OSJNBb from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 122901

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 88     cgcccgcctccgccgcgcct 107
              ||||||||||||||||||||
Sbjct: 114781 cgcccgcctccgccgcgcct 114800
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>gb|AE005174.2| Escherichia coli O157:H7 EDL933, complete genome
          Length = 5528445

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 412     ggcttgcattgctggatgaa 431
               ||||||||||||||||||||
Sbjct: 4238003 ggcttgcattgctggatgaa 4238022
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>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 132     ccgcagccgcctcccgccggggga 155
               |||| |||||||||||||||||||
Sbjct: 2370963 ccgcggccgcctcccgccggggga 2370986
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>dbj|BA000007.2| Escherichia coli O157:H7 DNA, complete genome
          Length = 5498450

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 412     ggcttgcattgctggatgaa 431
               ||||||||||||||||||||
Sbjct: 4170781 ggcttgcattgctggatgaa 4170800
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>gb|CP000034.1| Shigella dysenteriae Sd197, complete genome
          Length = 4369232

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 412     ggcttgcattgctggatgaa 431
               ||||||||||||||||||||
Sbjct: 3218205 ggcttgcattgctggatgaa 3218224
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>gb|CP000036.1| Shigella boydii Sb227, complete genome
          Length = 4519823

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 412     ggcttgcattgctggatgaa 431
               ||||||||||||||||||||
Sbjct: 3284051 ggcttgcattgctggatgaa 3284070
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>dbj|AB022738.1| Brasenia schreberi genes for ITS1, 5.8S rRNA and ITS2
          Length = 647

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 27/28 (96%), Gaps = 1/28 (3%)
 Strand = Plus / Minus

                                       
Query: 72  agcgacggccag-cctccgcccgcctcc 98
           |||||||||||| |||||||||||||||
Sbjct: 509 agcgacggccagtcctccgcccgcctcc 482


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,474,018
Number of Sequences: 3902068
Number of extensions: 3474018
Number of successful extensions: 81929
Number of sequences better than 10.0: 84
Number of HSP's better than 10.0 without gapping: 84
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 80582
Number of HSP's gapped (non-prelim): 1346
length of query: 558
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 535
effective length of database: 17,143,297,704
effective search space: 9171664271640
effective search space used: 9171664271640
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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