Clone Name | bart44b01 |
---|---|
Clone Library Name | barley_pub |
>ref|XM_463682.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1248 Score = 307 bits (155), Expect = 2e-80 Identities = 308/359 (85%) Strand = Plus / Plus Query: 216 cagggcccaggacaccgagaggatcgaagggagtgctggtgatgtgctggaggatgatcc 275 ||||| |||||||||||||||||||||||||||||| |||||||||||||| ||||| || Sbjct: 75 caggggccaggacaccgagaggatcgaagggagtgcgggtgatgtgctggaagatgaccc 134 Query: 276 tgtcgggaggctgaaggtgtacgtctacgagctgcccaccaagtacaacaagaagatggt 335 |||||||||||| |||||||| ||||||||| ||||||| || ||||||||||||||||| Sbjct: 135 tgtcgggaggcttaaggtgtatgtctacgagttgcccactaaatacaacaagaagatggt 194 Query: 336 ggccaaggactccaggtgcctcagccacatgtttgccgccgagatattcatgcaccggtt 395 ||| || || ||||| |||||||||||||||||||| || ||||| |||||||| || || Sbjct: 195 ggcaaaagattccagatgcctcagccacatgtttgctgcagagattttcatgcatcgatt 254 Query: 396 cctgctgtcgagcgcgatccggaccatgaacccggaggaggccgactggttctacactcc 455 ||| |||| || ||||||||||| | || |||||||| || || |||||||| ||||| Sbjct: 255 cctcttgtcaagtgcgatccggactttaaatccggaggaagctgattggttctatactcc 314 Query: 456 ggtgtacaccacctgtgaccttactccgtggggccatccgttgcccttcaagcctccgcg 515 || ||||| || || || |||||||| ||||| ||||| |||||||||||| |||| | Sbjct: 315 agtatacacgacgtgcgatcttactccatggggtcatcccttgcccttcaagtctccaag 374 Query: 516 gatcatgaggagtgcagttcagtttatctcatcacactggccctattggaaccggacag 574 ||| ||||| |||||| ||||||| || || || || ||||||||||||||| |||||| Sbjct: 375 gattatgagaagtgcaattcagttcatttcctcgcattggccctattggaacaggacag 433
>dbj|AK068465.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013156C14, full insert sequence Length = 1739 Score = 307 bits (155), Expect = 2e-80 Identities = 308/359 (85%) Strand = Plus / Plus Query: 216 cagggcccaggacaccgagaggatcgaagggagtgctggtgatgtgctggaggatgatcc 275 ||||| |||||||||||||||||||||||||||||| |||||||||||||| ||||| || Sbjct: 215 caggggccaggacaccgagaggatcgaagggagtgcgggtgatgtgctggaagatgaccc 274 Query: 276 tgtcgggaggctgaaggtgtacgtctacgagctgcccaccaagtacaacaagaagatggt 335 |||||||||||| |||||||| ||||||||| ||||||| || ||||||||||||||||| Sbjct: 275 tgtcgggaggcttaaggtgtatgtctacgagttgcccactaaatacaacaagaagatggt 334 Query: 336 ggccaaggactccaggtgcctcagccacatgtttgccgccgagatattcatgcaccggtt 395 ||| || || ||||| |||||||||||||||||||| || ||||| |||||||| || || Sbjct: 335 ggcaaaagattccagatgcctcagccacatgtttgctgcagagattttcatgcatcgatt 394 Query: 396 cctgctgtcgagcgcgatccggaccatgaacccggaggaggccgactggttctacactcc 455 ||| |||| || ||||||||||| | || |||||||| || || |||||||| ||||| Sbjct: 395 cctcttgtcaagtgcgatccggactttaaatccggaggaagctgattggttctatactcc 454 Query: 456 ggtgtacaccacctgtgaccttactccgtggggccatccgttgcccttcaagcctccgcg 515 || ||||| || || || |||||||| ||||| ||||| |||||||||||| |||| | Sbjct: 455 agtatacacgacgtgcgatcttactccatggggtcatcccttgcccttcaagtctccaag 514 Query: 516 gatcatgaggagtgcagttcagtttatctcatcacactggccctattggaaccggacag 574 ||| ||||| |||||| ||||||| || || || || ||||||||||||||| |||||| Sbjct: 515 gattatgagaagtgcaattcagttcatttcctcgcattggccctattggaacaggacag 573
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 262 bits (132), Expect = 1e-66 Identities = 282/332 (84%) Strand = Plus / Minus Query: 243 agggagtgctggtgatgtgctggaggatgatcctgtcgggaggctgaaggtgtacgtcta 302 ||||||||| |||||||||||||| ||||| |||||||||||||| |||||||| ||||| Sbjct: 40620568 agggagtgcgggtgatgtgctggaagatgaccctgtcgggaggcttaaggtgtatgtcta 40620509 Query: 303 cgagctgcccaccaagtacaacaagaagatggtggccaaggactccaggtgcctcagcca 362 |||| ||||||| || |||||||||||||||||||| || || ||||| ||||||||||| Sbjct: 40620508 cgagttgcccactaaatacaacaagaagatggtggcaaaagattccagatgcctcagcca 40620449 Query: 363 catgtttgccgccgagatattcatgcaccggttcctgctgtcgagcgcgatccggaccat 422 ||||||||| || ||||| |||||||| || ||||| |||| || ||||||||||| | Sbjct: 40620448 catgtttgctgcagagattttcatgcatcgattcctcttgtcaagtgcgatccggacttt 40620389 Query: 423 gaacccggaggaggccgactggttctacactccggtgtacaccacctgtgaccttactcc 482 || |||||||| || || |||||||| ||||| || ||||| || || || |||||||| Sbjct: 40620388 aaatccggaggaagctgattggttctatactccagtatacacgacgtgcgatcttactcc 40620329 Query: 483 gtggggccatccgttgcccttcaagcctccgcggatcatgaggagtgcagttcagtttat 542 ||||| ||||| |||||||||||| |||| |||| ||||| |||||| ||||||| || Sbjct: 40620328 atggggtcatcccttgcccttcaagtctccaaggattatgagaagtgcaattcagttcat 40620269 Query: 543 ctcatcacactggccctattggaaccggacag 574 || || || ||||||||||||||| |||||| Sbjct: 40620268 ttcctcgcattggccctattggaacaggacag 40620237 Score = 127 bits (64), Expect = 5e-26 Identities = 211/260 (81%) Strand = Plus / Minus Query: 247 agtgctggtgatgtgctggaggatgatcctgtcgggaggctgaaggtgtacgtctacgag 306 ||||||||||||||| |||| ||||| ||||| |||||||| ||||| || ||||| || Sbjct: 40627420 agtgctggtgatgtgttggaagatgaccctgttgggaggcttaaggtctatgtctatgat 40627361 Query: 307 ctgcccaccaagtacaacaagaagatggtggccaaggactccaggtgcctcagccacatg 366 || || | |||||||||||||||| || || ||||| | |||||||| | ||||||| Sbjct: 40627360 ctcccaagcaagtacaacaagaagctgctgaagaaggatcctaggtgcctgaaccacatg 40627301 Query: 367 tttgccgccgagatattcatgcaccggttcctgctgtcgagcgcgatccggaccatgaac 426 |||||||| ||||| |||||||| ||||||||| |||| ||||| |||| || | || Sbjct: 40627300 tttgccgctgagattttcatgcatcggttcctgttgtcaagcgctgtccgaacttttaat 40627241 Query: 427 ccggaggaggccgactggttctacactccggtgtacaccacctgtgaccttactccgtgg 486 || ||||| || || ||||||||||| ||||||||||| || || ||||| ||||| | Sbjct: 40627240 cccgaggaagctgattggttctacacaccggtgtacactacatgcgacctgactccctcc 40627181 Query: 487 ggccatccgttgcccttcaa 506 || | ||| ||||||||||| Sbjct: 40627180 ggtcttcccttgcccttcaa 40627161 Score = 75.8 bits (38), Expect = 1e-10 Identities = 160/198 (80%), Gaps = 2/198 (1%) Strand = Plus / Minus Query: 280 gggaggctgaaggtgtacgtctacgagctgcccaccaagtacaacaagaagatggtggcc 339 |||| ||||||||||| ||| |||||| |||| |||||||||| ||| || ||||| Sbjct: 40609439 gggaagctgaaggtgttcgtgtacgagatgccacgcaagtacaacctgaacctgctggcc 40609380 Query: 340 aaggactccaggtgcct-cagccacatgtttgccgccgagatattcatgcaccggttcct 398 |||||| | ||||||| |||| ||||||| || || ||||| |||||||||| |||||| Sbjct: 40609379 aaggacagccggtgcctgcagc-acatgttcgcggcggagatcttcatgcaccagttcct 40609321 Query: 399 gctgtcgagcgcgatccggaccatgaacccggaggaggccgactggttctacactccggt 458 || || ||| | | || ||| | |||||||||||||||||||||||||||| || | Sbjct: 40609320 cctctccagccccgtgcgcaccctcgacccggaggaggccgactggttctacacacccgc 40609261 Query: 459 gtacaccacctgtgacct 476 ||||||||||| ||||| Sbjct: 40609260 ctacaccacctgcgacct 40609243 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 216 cagggcccaggacaccgagaggatcgaagg 245 ||||| |||||||||||||||||||||||| Sbjct: 40621614 caggggccaggacaccgagaggatcgaagg 40621585
>dbj|AP004332.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0093F16 Length = 160925 Score = 262 bits (132), Expect = 1e-66 Identities = 282/332 (84%) Strand = Plus / Minus Query: 243 agggagtgctggtgatgtgctggaggatgatcctgtcgggaggctgaaggtgtacgtcta 302 ||||||||| |||||||||||||| ||||| |||||||||||||| |||||||| ||||| Sbjct: 62546 agggagtgcgggtgatgtgctggaagatgaccctgtcgggaggcttaaggtgtatgtcta 62487 Query: 303 cgagctgcccaccaagtacaacaagaagatggtggccaaggactccaggtgcctcagcca 362 |||| ||||||| || |||||||||||||||||||| || || ||||| ||||||||||| Sbjct: 62486 cgagttgcccactaaatacaacaagaagatggtggcaaaagattccagatgcctcagcca 62427 Query: 363 catgtttgccgccgagatattcatgcaccggttcctgctgtcgagcgcgatccggaccat 422 ||||||||| || ||||| |||||||| || ||||| |||| || ||||||||||| | Sbjct: 62426 catgtttgctgcagagattttcatgcatcgattcctcttgtcaagtgcgatccggacttt 62367 Query: 423 gaacccggaggaggccgactggttctacactccggtgtacaccacctgtgaccttactcc 482 || |||||||| || || |||||||| ||||| || ||||| || || || |||||||| Sbjct: 62366 aaatccggaggaagctgattggttctatactccagtatacacgacgtgcgatcttactcc 62307 Query: 483 gtggggccatccgttgcccttcaagcctccgcggatcatgaggagtgcagttcagtttat 542 ||||| ||||| |||||||||||| |||| |||| ||||| |||||| ||||||| || Sbjct: 62306 atggggtcatcccttgcccttcaagtctccaaggattatgagaagtgcaattcagttcat 62247 Query: 543 ctcatcacactggccctattggaaccggacag 574 || || || ||||||||||||||| |||||| Sbjct: 62246 ttcctcgcattggccctattggaacaggacag 62215 Score = 127 bits (64), Expect = 5e-26 Identities = 211/260 (81%) Strand = Plus / Minus Query: 247 agtgctggtgatgtgctggaggatgatcctgtcgggaggctgaaggtgtacgtctacgag 306 ||||||||||||||| |||| ||||| ||||| |||||||| ||||| || ||||| || Sbjct: 69398 agtgctggtgatgtgttggaagatgaccctgttgggaggcttaaggtctatgtctatgat 69339 Query: 307 ctgcccaccaagtacaacaagaagatggtggccaaggactccaggtgcctcagccacatg 366 || || | |||||||||||||||| || || ||||| | |||||||| | ||||||| Sbjct: 69338 ctcccaagcaagtacaacaagaagctgctgaagaaggatcctaggtgcctgaaccacatg 69279 Query: 367 tttgccgccgagatattcatgcaccggttcctgctgtcgagcgcgatccggaccatgaac 426 |||||||| ||||| |||||||| ||||||||| |||| ||||| |||| || | || Sbjct: 69278 tttgccgctgagattttcatgcatcggttcctgttgtcaagcgctgtccgaacttttaat 69219 Query: 427 ccggaggaggccgactggttctacactccggtgtacaccacctgtgaccttactccgtgg 486 || ||||| || || ||||||||||| ||||||||||| || || ||||| ||||| | Sbjct: 69218 cccgaggaagctgattggttctacacaccggtgtacactacatgcgacctgactccctcc 69159 Query: 487 ggccatccgttgcccttcaa 506 || | ||| ||||||||||| Sbjct: 69158 ggtcttcccttgcccttcaa 69139 Score = 75.8 bits (38), Expect = 1e-10 Identities = 160/198 (80%), Gaps = 2/198 (1%) Strand = Plus / Minus Query: 280 gggaggctgaaggtgtacgtctacgagctgcccaccaagtacaacaagaagatggtggcc 339 |||| ||||||||||| ||| |||||| |||| |||||||||| ||| || ||||| Sbjct: 51417 gggaagctgaaggtgttcgtgtacgagatgccacgcaagtacaacctgaacctgctggcc 51358 Query: 340 aaggactccaggtgcct-cagccacatgtttgccgccgagatattcatgcaccggttcct 398 |||||| | ||||||| |||| ||||||| || || ||||| |||||||||| |||||| Sbjct: 51357 aaggacagccggtgcctgcagc-acatgttcgcggcggagatcttcatgcaccagttcct 51299 Query: 399 gctgtcgagcgcgatccggaccatgaacccggaggaggccgactggttctacactccggt 458 || || ||| | | || ||| | |||||||||||||||||||||||||||| || | Sbjct: 51298 cctctccagccccgtgcgcaccctcgacccggaggaggccgactggttctacacacccgc 51239 Query: 459 gtacaccacctgtgacct 476 ||||||||||| ||||| Sbjct: 51238 ctacaccacctgcgacct 51221 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 216 cagggcccaggacaccgagaggatcgaagg 245 ||||| |||||||||||||||||||||||| Sbjct: 63592 caggggccaggacaccgagaggatcgaagg 63563
>dbj|AP003262.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0482D04 Length = 144583 Score = 262 bits (132), Expect = 1e-66 Identities = 282/332 (84%) Strand = Plus / Minus Query: 243 agggagtgctggtgatgtgctggaggatgatcctgtcgggaggctgaaggtgtacgtcta 302 ||||||||| |||||||||||||| ||||| |||||||||||||| |||||||| ||||| Sbjct: 100583 agggagtgcgggtgatgtgctggaagatgaccctgtcgggaggcttaaggtgtatgtcta 100524 Query: 303 cgagctgcccaccaagtacaacaagaagatggtggccaaggactccaggtgcctcagcca 362 |||| ||||||| || |||||||||||||||||||| || || ||||| ||||||||||| Sbjct: 100523 cgagttgcccactaaatacaacaagaagatggtggcaaaagattccagatgcctcagcca 100464 Query: 363 catgtttgccgccgagatattcatgcaccggttcctgctgtcgagcgcgatccggaccat 422 ||||||||| || ||||| |||||||| || ||||| |||| || ||||||||||| | Sbjct: 100463 catgtttgctgcagagattttcatgcatcgattcctcttgtcaagtgcgatccggacttt 100404 Query: 423 gaacccggaggaggccgactggttctacactccggtgtacaccacctgtgaccttactcc 482 || |||||||| || || |||||||| ||||| || ||||| || || || |||||||| Sbjct: 100403 aaatccggaggaagctgattggttctatactccagtatacacgacgtgcgatcttactcc 100344 Query: 483 gtggggccatccgttgcccttcaagcctccgcggatcatgaggagtgcagttcagtttat 542 ||||| ||||| |||||||||||| |||| |||| ||||| |||||| ||||||| || Sbjct: 100343 atggggtcatcccttgcccttcaagtctccaaggattatgagaagtgcaattcagttcat 100284 Query: 543 ctcatcacactggccctattggaaccggacag 574 || || || ||||||||||||||| |||||| Sbjct: 100283 ttcctcgcattggccctattggaacaggacag 100252 Score = 127 bits (64), Expect = 5e-26 Identities = 211/260 (81%) Strand = Plus / Minus Query: 247 agtgctggtgatgtgctggaggatgatcctgtcgggaggctgaaggtgtacgtctacgag 306 ||||||||||||||| |||| ||||| ||||| |||||||| ||||| || ||||| || Sbjct: 107435 agtgctggtgatgtgttggaagatgaccctgttgggaggcttaaggtctatgtctatgat 107376 Query: 307 ctgcccaccaagtacaacaagaagatggtggccaaggactccaggtgcctcagccacatg 366 || || | |||||||||||||||| || || ||||| | |||||||| | ||||||| Sbjct: 107375 ctcccaagcaagtacaacaagaagctgctgaagaaggatcctaggtgcctgaaccacatg 107316 Query: 367 tttgccgccgagatattcatgcaccggttcctgctgtcgagcgcgatccggaccatgaac 426 |||||||| ||||| |||||||| ||||||||| |||| ||||| |||| || | || Sbjct: 107315 tttgccgctgagattttcatgcatcggttcctgttgtcaagcgctgtccgaacttttaat 107256 Query: 427 ccggaggaggccgactggttctacactccggtgtacaccacctgtgaccttactccgtgg 486 || ||||| || || ||||||||||| ||||||||||| || || ||||| ||||| | Sbjct: 107255 cccgaggaagctgattggttctacacaccggtgtacactacatgcgacctgactccctcc 107196 Query: 487 ggccatccgttgcccttcaa 506 || | ||| ||||||||||| Sbjct: 107195 ggtcttcccttgcccttcaa 107176 Score = 75.8 bits (38), Expect = 1e-10 Identities = 160/198 (80%), Gaps = 2/198 (1%) Strand = Plus / Minus Query: 280 gggaggctgaaggtgtacgtctacgagctgcccaccaagtacaacaagaagatggtggcc 339 |||| ||||||||||| ||| |||||| |||| |||||||||| ||| || ||||| Sbjct: 89454 gggaagctgaaggtgttcgtgtacgagatgccacgcaagtacaacctgaacctgctggcc 89395 Query: 340 aaggactccaggtgcct-cagccacatgtttgccgccgagatattcatgcaccggttcct 398 |||||| | ||||||| |||| ||||||| || || ||||| |||||||||| |||||| Sbjct: 89394 aaggacagccggtgcctgcagc-acatgttcgcggcggagatcttcatgcaccagttcct 89336 Query: 399 gctgtcgagcgcgatccggaccatgaacccggaggaggccgactggttctacactccggt 458 || || ||| | | || ||| | |||||||||||||||||||||||||||| || | Sbjct: 89335 cctctccagccccgtgcgcaccctcgacccggaggaggccgactggttctacacacccgc 89276 Query: 459 gtacaccacctgtgacct 476 ||||||||||| ||||| Sbjct: 89275 ctacaccacctgcgacct 89258 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 216 cagggcccaggacaccgagaggatcgaagg 245 ||||| |||||||||||||||||||||||| Sbjct: 101629 caggggccaggacaccgagaggatcgaagg 101600
>gb|AC092173.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0095J15, complete sequence Length = 156023 Score = 216 bits (109), Expect = 6e-53 Identities = 214/248 (86%), Gaps = 2/248 (0%) Strand = Plus / Minus Query: 249 tgctggtgatgtgctggag--gatgatcctgtcgggaggctgaaggtgtacgtctacgag 306 ||||||||||||||| ||| || |||||||| || | |||||||||||| ||||||||| Sbjct: 11869 tgctggtgatgtgctagagaagacgatcctgttggaaagctgaaggtgtatgtctacgag 11810 Query: 307 ctgcccaccaagtacaacaagaagatggtggccaaggactccaggtgcctcagccacatg 366 |||||| |||||||||||||||| || ||||| || || ||||| ||||||||||||||| Sbjct: 11809 ctgccccccaagtacaacaagaacattgtggcgaaagattccagatgcctcagccacatg 11750 Query: 367 tttgccgccgagatattcatgcaccggttcctgctgtcgagcgcgatccggaccatgaac 426 |||||| | ||||| |||||||| || |||||||||||||| ||||||||||| ||| Sbjct: 11749 tttgccacagagatcttcatgcatcgcttcctgctgtcgagtgcgatccggacttcgaat 11690 Query: 427 ccggaggaggccgactggttctacactccggtgtacaccacctgtgaccttactccgtgg 486 ||||| || ||||| |||||||||||||| ||||||||||| || ||||| || || ||| Sbjct: 11689 ccggacgaagccgattggttctacactccagtgtacaccacatgcgacctcacgccatgg 11630 Query: 487 ggccatcc 494 |||||||| Sbjct: 11629 ggccatcc 11622
>gb|AC083944.8| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0047G15, from chromosome 10, complete sequence Length = 166474 Score = 216 bits (109), Expect = 6e-53 Identities = 214/248 (86%), Gaps = 2/248 (0%) Strand = Plus / Minus Query: 249 tgctggtgatgtgctggag--gatgatcctgtcgggaggctgaaggtgtacgtctacgag 306 ||||||||||||||| ||| || |||||||| || | |||||||||||| ||||||||| Sbjct: 145399 tgctggtgatgtgctagagaagacgatcctgttggaaagctgaaggtgtatgtctacgag 145340 Query: 307 ctgcccaccaagtacaacaagaagatggtggccaaggactccaggtgcctcagccacatg 366 |||||| |||||||||||||||| || ||||| || || ||||| ||||||||||||||| Sbjct: 145339 ctgccccccaagtacaacaagaacattgtggcgaaagattccagatgcctcagccacatg 145280 Query: 367 tttgccgccgagatattcatgcaccggttcctgctgtcgagcgcgatccggaccatgaac 426 |||||| | ||||| |||||||| || |||||||||||||| ||||||||||| ||| Sbjct: 145279 tttgccacagagatcttcatgcatcgcttcctgctgtcgagtgcgatccggacttcgaat 145220 Query: 427 ccggaggaggccgactggttctacactccggtgtacaccacctgtgaccttactccgtgg 486 ||||| || ||||| |||||||||||||| ||||||||||| || ||||| || || ||| Sbjct: 145219 ccggacgaagccgattggttctacactccagtgtacaccacatgcgacctcacgccatgg 145160 Query: 487 ggccatcc 494 |||||||| Sbjct: 145159 ggccatcc 145152
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 216 bits (109), Expect = 6e-53 Identities = 214/248 (86%), Gaps = 2/248 (0%) Strand = Plus / Minus Query: 249 tgctggtgatgtgctggag--gatgatcctgtcgggaggctgaaggtgtacgtctacgag 306 ||||||||||||||| ||| || |||||||| || | |||||||||||| ||||||||| Sbjct: 5140098 tgctggtgatgtgctagagaagacgatcctgttggaaagctgaaggtgtatgtctacgag 5140039 Query: 307 ctgcccaccaagtacaacaagaagatggtggccaaggactccaggtgcctcagccacatg 366 |||||| |||||||||||||||| || ||||| || || ||||| ||||||||||||||| Sbjct: 5140038 ctgccccccaagtacaacaagaacattgtggcgaaagattccagatgcctcagccacatg 5139979 Query: 367 tttgccgccgagatattcatgcaccggttcctgctgtcgagcgcgatccggaccatgaac 426 |||||| | ||||| |||||||| || |||||||||||||| ||||||||||| ||| Sbjct: 5139978 tttgccacagagatcttcatgcatcgcttcctgctgtcgagtgcgatccggacttcgaat 5139919 Query: 427 ccggaggaggccgactggttctacactccggtgtacaccacctgtgaccttactccgtgg 486 ||||| || ||||| |||||||||||||| ||||||||||| || ||||| || || ||| Sbjct: 5139918 ccggacgaagccgattggttctacactccagtgtacaccacatgcgacctcacgccatgg 5139859 Query: 487 ggccatcc 494 |||||||| Sbjct: 5139858 ggccatcc 5139851 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 132 ggcggcggcgatggggaagccg 153 |||||||||||||||||||||| Sbjct: 14271127 ggcggcggcgatggggaagccg 14271148
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 216 bits (109), Expect = 6e-53 Identities = 214/248 (86%), Gaps = 2/248 (0%) Strand = Plus / Minus Query: 249 tgctggtgatgtgctggag--gatgatcctgtcgggaggctgaaggtgtacgtctacgag 306 ||||||||||||||| ||| || |||||||| || | |||||||||||| ||||||||| Sbjct: 5140885 tgctggtgatgtgctagagaagacgatcctgttggaaagctgaaggtgtatgtctacgag 5140826 Query: 307 ctgcccaccaagtacaacaagaagatggtggccaaggactccaggtgcctcagccacatg 366 |||||| |||||||||||||||| || ||||| || || ||||| ||||||||||||||| Sbjct: 5140825 ctgccccccaagtacaacaagaacattgtggcgaaagattccagatgcctcagccacatg 5140766 Query: 367 tttgccgccgagatattcatgcaccggttcctgctgtcgagcgcgatccggaccatgaac 426 |||||| | ||||| |||||||| || |||||||||||||| ||||||||||| ||| Sbjct: 5140765 tttgccacagagatcttcatgcatcgcttcctgctgtcgagtgcgatccggacttcgaat 5140706 Query: 427 ccggaggaggccgactggttctacactccggtgtacaccacctgtgaccttactccgtgg 486 ||||| || ||||| |||||||||||||| ||||||||||| || ||||| || || ||| Sbjct: 5140705 ccggacgaagccgattggttctacactccagtgtacaccacatgcgacctcacgccatgg 5140646 Query: 487 ggccatcc 494 |||||||| Sbjct: 5140645 ggccatcc 5140638 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 132 ggcggcggcgatggggaagccg 153 |||||||||||||||||||||| Sbjct: 14279369 ggcggcggcgatggggaagccg 14279390
>ref|NM_195174.1| Oryza sativa (japonica cultivar-group) unknown protein (OSJNBa0047G15.26), mRNA Length = 1206 Score = 206 bits (104), Expect = 6e-50 Identities = 194/224 (86%) Strand = Plus / Plus Query: 271 gatcctgtcgggaggctgaaggtgtacgtctacgagctgcccaccaagtacaacaagaag 330 |||||||| || | |||||||||||| ||||||||||||||| |||||||||||||||| Sbjct: 88 gatcctgttggaaagctgaaggtgtatgtctacgagctgccccccaagtacaacaagaac 147 Query: 331 atggtggccaaggactccaggtgcctcagccacatgtttgccgccgagatattcatgcac 390 || ||||| || || ||||| ||||||||||||||||||||| | ||||| |||||||| Sbjct: 148 attgtggcgaaagattccagatgcctcagccacatgtttgccacagagatcttcatgcat 207 Query: 391 cggttcctgctgtcgagcgcgatccggaccatgaacccggaggaggccgactggttctac 450 || |||||||||||||| ||||||||||| ||| ||||| || ||||| ||||||||| Sbjct: 208 cgcttcctgctgtcgagtgcgatccggacttcgaatccggacgaagccgattggttctac 267 Query: 451 actccggtgtacaccacctgtgaccttactccgtggggccatcc 494 ||||| ||||||||||| || ||||| || || ||||||||||| Sbjct: 268 actccagtgtacaccacatgcgacctcacgccatggggccatcc 311
>dbj|AK070803.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023069D21, full insert sequence Length = 1744 Score = 206 bits (104), Expect = 6e-50 Identities = 194/224 (86%) Strand = Plus / Plus Query: 271 gatcctgtcgggaggctgaaggtgtacgtctacgagctgcccaccaagtacaacaagaag 330 |||||||| || | |||||||||||| ||||||||||||||| |||||||||||||||| Sbjct: 283 gatcctgttggaaagctgaaggtgtatgtctacgagctgccccccaagtacaacaagaac 342 Query: 331 atggtggccaaggactccaggtgcctcagccacatgtttgccgccgagatattcatgcac 390 || ||||| || || ||||| ||||||||||||||||||||| | ||||| |||||||| Sbjct: 343 attgtggcgaaagattccagatgcctcagccacatgtttgccacagagatcttcatgcat 402 Query: 391 cggttcctgctgtcgagcgcgatccggaccatgaacccggaggaggccgactggttctac 450 || |||||||||||||| ||||||||||| ||| ||||| || ||||| ||||||||| Sbjct: 403 cgcttcctgctgtcgagtgcgatccggacttcgaatccggacgaagccgattggttctac 462 Query: 451 actccggtgtacaccacctgtgaccttactccgtggggccatcc 494 ||||| ||||||||||| || ||||| || || ||||||||||| Sbjct: 463 actccagtgtacaccacatgcgacctcacgccatggggccatcc 506
>dbj|AB080694.1| Oryza sativa (japonica cultivar-group) OsGUT1 mRNA for NpGUT1 homolog, complete cds Length = 1206 Score = 206 bits (104), Expect = 6e-50 Identities = 194/224 (86%) Strand = Plus / Plus Query: 271 gatcctgtcgggaggctgaaggtgtacgtctacgagctgcccaccaagtacaacaagaag 330 |||||||| || | |||||||||||| ||||||||||||||| |||||||||||||||| Sbjct: 88 gatcctgttggaaagctgaaggtgtatgtctacgagctgccccccaagtacaacaagaac 147 Query: 331 atggtggccaaggactccaggtgcctcagccacatgtttgccgccgagatattcatgcac 390 || ||||| || || ||||| ||||||||||||||||||||| | ||||| |||||||| Sbjct: 148 attgtggcgaaagattccagatgcctcagccacatgtttgccacagagatcttcatgcat 207 Query: 391 cggttcctgctgtcgagcgcgatccggaccatgaacccggaggaggccgactggttctac 450 || |||||||||||||| ||||||||||| ||| ||||| || ||||| ||||||||| Sbjct: 208 cgcttcctgctgtcgagtgcgatccggacttcgaatccggacgaagccgattggttctac 267 Query: 451 actccggtgtacaccacctgtgaccttactccgtggggccatcc 494 ||||| ||||||||||| || ||||| || || ||||||||||| Sbjct: 268 actccagtgtacaccacatgcgacctcacgccatggggccatcc 311
>ref|XM_463683.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1254 Score = 133 bits (67), Expect = 7e-28 Identities = 205/251 (81%) Strand = Plus / Plus Query: 232 gagaggatcgaagggagtgctggtgatgtgctggaggatgatcctgtcgggaggctgaag 291 ||||||||| ||| ||||||||||||||| |||| ||||| ||||| |||||||| ||| Sbjct: 97 gagaggatctcaggaagtgctggtgatgtgttggaagatgaccctgttgggaggcttaag 156 Query: 292 gtgtacgtctacgagctgcccaccaagtacaacaagaagatggtggccaaggactccagg 351 || || ||||| || || || | |||||||||||||||| || || ||||| | ||| Sbjct: 157 gtctatgtctatgatctcccaagcaagtacaacaagaagctgctgaagaaggatcctagg 216 Query: 352 tgcctcagccacatgtttgccgccgagatattcatgcaccggttcctgctgtcgagcgcg 411 ||||| | ||||||||||||||| ||||| |||||||| ||||||||| |||| ||||| Sbjct: 217 tgcctgaaccacatgtttgccgctgagattttcatgcatcggttcctgttgtcaagcgct 276 Query: 412 atccggaccatgaacccggaggaggccgactggttctacactccggtgtacaccacctgt 471 |||| || | || || ||||| || || ||||||||||| ||||||||||| || || Sbjct: 277 gtccgaacttttaatcccgaggaagctgattggttctacacaccggtgtacactacatgc 336 Query: 472 gaccttactcc 482 ||||| ||||| Sbjct: 337 gacctgactcc 347
>gb|AY596523.1| Saccharum officinarum clone SCQGLR1019H07, complete sequence Length = 1928 Score = 133 bits (67), Expect = 7e-28 Identities = 205/251 (81%) Strand = Plus / Plus Query: 232 gagaggatcgaagggagtgctggtgatgtgctggaggatgatcctgtcgggaggctgaag 291 ||||||||| ||||||||||||||| ||| | || ||| | ||||| |||||||| ||| Sbjct: 498 gagaggatctcagggagtgctggtgacgtgttagaagataaccctgttgggaggctcaag 557 Query: 292 gtgtacgtctacgagctgcccaccaagtacaacaagaagatggtggccaaggactccagg 351 || |||||||| || || |||| || |||||||||||| || || ||||| | ||| Sbjct: 558 gtttacgtctatgatctccccagtaaatacaacaagaagctgctgaagaaggatcctagg 617 Query: 352 tgcctcagccacatgtttgccgccgagatattcatgcaccggttcctgctgtcgagcgcg 411 ||||||| |||||||||||| || ||||| |||||||||||||||||| |||||||||| Sbjct: 618 tgcctcaaccacatgtttgctgcggagatcttcatgcaccggttcctgttgtcgagcgct 677 Query: 412 atccggaccatgaacccggaggaggccgactggttctacactccggtgtacaccacctgt 471 |||| || | || ||||| || || || ||||||||||| || ||||||||||| ||| Sbjct: 678 gtccgaacttttaatccggaagaagcggattggttctacacgcccgtgtacaccacatgt 737 Query: 472 gaccttactcc 482 || || ||||| Sbjct: 738 gatctgactcc 748
>dbj|AK109393.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-A02, full insert sequence Length = 1379 Score = 133 bits (67), Expect = 7e-28 Identities = 124/143 (86%) Strand = Plus / Plus Query: 352 tgcctcagccacatgtttgccgccgagatattcatgcaccggttcctgctgtcgagcgcg 411 ||||||||||||||||||||| | ||||| |||||||| || |||||||||||||| ||| Sbjct: 5 tgcctcagccacatgtttgccacagagatcttcatgcatcgcttcctgctgtcgagtgcg 64 Query: 412 atccggaccatgaacccggaggaggccgactggttctacactccggtgtacaccacctgt 471 |||||||| ||| ||||| || ||||| |||||||||||||| ||||||||||| || Sbjct: 65 atccggacttcgaatccggacgaagccgattggttctacactccagtgtacaccacatgc 124 Query: 472 gaccttactccgtggggccatcc 494 ||||| || || ||||||||||| Sbjct: 125 gacctcacgccatggggccatcc 147
>ref|XM_463681.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1269 Score = 75.8 bits (38), Expect = 1e-10 Identities = 160/198 (80%), Gaps = 2/198 (1%) Strand = Plus / Plus Query: 280 gggaggctgaaggtgtacgtctacgagctgcccaccaagtacaacaagaagatggtggcc 339 |||| ||||||||||| ||| |||||| |||| |||||||||| ||| || ||||| Sbjct: 160 gggaagctgaaggtgttcgtgtacgagatgccacgcaagtacaacctgaacctgctggcc 219 Query: 340 aaggactccaggtgcct-cagccacatgtttgccgccgagatattcatgcaccggttcct 398 |||||| | ||||||| |||| ||||||| || || ||||| |||||||||| |||||| Sbjct: 220 aaggacagccggtgcctgcagc-acatgttcgcggcggagatcttcatgcaccagttcct 278 Query: 399 gctgtcgagcgcgatccggaccatgaacccggaggaggccgactggttctacactccggt 458 || || ||| | | || ||| | |||||||||||||||||||||||||||| || | Sbjct: 279 cctctccagccccgtgcgcaccctcgacccggaggaggccgactggttctacacacccgc 338 Query: 459 gtacaccacctgtgacct 476 ||||||||||| ||||| Sbjct: 339 ctacaccacctgcgacct 356
>dbj|AK073976.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033076M19, full insert sequence Length = 1853 Score = 75.8 bits (38), Expect = 1e-10 Identities = 160/198 (80%), Gaps = 2/198 (1%) Strand = Plus / Plus Query: 280 gggaggctgaaggtgtacgtctacgagctgcccaccaagtacaacaagaagatggtggcc 339 |||| ||||||||||| ||| |||||| |||| |||||||||| ||| || ||||| Sbjct: 503 gggaagctgaaggtgttcgtgtacgagatgccacgcaagtacaacctgaacctgctggcc 562 Query: 340 aaggactccaggtgcct-cagccacatgtttgccgccgagatattcatgcaccggttcct 398 |||||| | ||||||| |||| ||||||| || || ||||| |||||||||| |||||| Sbjct: 563 aaggacagccggtgcctgcagc-acatgttcgcggcggagatcttcatgcaccagttcct 621 Query: 399 gctgtcgagcgcgatccggaccatgaacccggaggaggccgactggttctacactccggt 458 || || ||| | | || ||| | |||||||||||||||||||||||||||| || | Sbjct: 622 cctctccagccccgtgcgcaccctcgacccggaggaggccgactggttctacacacccgc 681 Query: 459 gtacaccacctgtgacct 476 ||||||||||| ||||| Sbjct: 682 ctacaccacctgcgacct 699
>dbj|AK063916.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-123-B02, full insert sequence Length = 1621 Score = 75.8 bits (38), Expect = 1e-10 Identities = 160/198 (80%), Gaps = 2/198 (1%) Strand = Plus / Plus Query: 280 gggaggctgaaggtgtacgtctacgagctgcccaccaagtacaacaagaagatggtggcc 339 |||| ||||||||||| ||| |||||| |||| |||||||||| ||| || ||||| Sbjct: 265 gggaagctgaaggtgttcgtgtacgagatgccacgcaagtacaacctgaacctgctggcc 324 Query: 340 aaggactccaggtgcct-cagccacatgtttgccgccgagatattcatgcaccggttcct 398 |||||| | ||||||| |||| ||||||| || || ||||| |||||||||| |||||| Sbjct: 325 aaggacagccggtgcctgcagc-acatgttcgcggcggagatcttcatgcaccagttcct 383 Query: 399 gctgtcgagcgcgatccggaccatgaacccggaggaggccgactggttctacactccggt 458 || || ||| | | || ||| | |||||||||||||||||||||||||||| || | Sbjct: 384 cctctccagccccgtgcgcaccctcgacccggaggaggccgactggttctacacacccgc 443 Query: 459 gtacaccacctgtgacct 476 ||||||||||| ||||| Sbjct: 444 ctacaccacctgcgacct 461
>ref|XM_472344.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1263 Score = 73.8 bits (37), Expect = 6e-10 Identities = 133/165 (80%) Strand = Plus / Plus Query: 243 agggagtgctggtgatgtgctggaggatgatcctgtcgggaggctgaaggtgtacgtcta 302 ||||||||| || |||||||| || || ||||||| |||||| ||||||| | | |||| Sbjct: 117 agggagtgccggcgatgtgctcgaagacaatcctgtggggaggttgaaggtcttcatcta 176 Query: 303 cgagctgcccaccaagtacaacaagaagatggtggccaaggactccaggtgcctcagcca 362 || || || | |||||||||||||||||||| |||||| || ||||||||| || Sbjct: 177 tgacctcccaagaaagtacaacaagaagatggtcaacaaggatccccggtgcctcaatca 236 Query: 363 catgtttgccgccgagatattcatgcaccggttcctgctgtcgag 407 ||||||||| || || ||||||||||| || ||| |||| ||||| Sbjct: 237 catgtttgctgcagaaatattcatgcatcgcttcttgctctcgag 281
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 73.8 bits (37), Expect = 6e-10 Identities = 133/165 (80%) Strand = Plus / Plus Query: 243 agggagtgctggtgatgtgctggaggatgatcctgtcgggaggctgaaggtgtacgtcta 302 ||||||||| || |||||||| || || ||||||| |||||| ||||||| | | |||| Sbjct: 19700243 agggagtgccggcgatgtgctcgaagacaatcctgtggggaggttgaaggtcttcatcta 19700302 Query: 303 cgagctgcccaccaagtacaacaagaagatggtggccaaggactccaggtgcctcagcca 362 || || || | |||||||||||||||||||| |||||| || ||||||||| || Sbjct: 19700303 tgacctcccaagaaagtacaacaagaagatggtcaacaaggatccccggtgcctcaatca 19700362 Query: 363 catgtttgccgccgagatattcatgcaccggttcctgctgtcgag 407 ||||||||| || || ||||||||||| || ||| |||| ||||| Sbjct: 19700363 catgtttgctgcagaaatattcatgcatcgcttcttgctctcgag 19700407 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 122 gctgcgggtgggcggcggcg 141 |||||||||||||||||||| Sbjct: 19660809 gctgcgggtgggcggcggcg 19660790
>dbj|AK107473.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-129-B06, full insert sequence Length = 2766 Score = 73.8 bits (37), Expect = 6e-10 Identities = 133/165 (80%) Strand = Plus / Plus Query: 243 agggagtgctggtgatgtgctggaggatgatcctgtcgggaggctgaaggtgtacgtcta 302 ||||||||| || |||||||| || || ||||||| |||||| ||||||| | | |||| Sbjct: 306 agggagtgccggcgatgtgctcgaagacaatcctgtggggaggttgaaggtcttcatcta 365 Query: 303 cgagctgcccaccaagtacaacaagaagatggtggccaaggactccaggtgcctcagcca 362 || || || | |||||||||||||||||||| |||||| || ||||||||| || Sbjct: 366 tgacctcccaagaaagtacaacaagaagatggtcaacaaggatccccggtgcctcaatca 425 Query: 363 catgtttgccgccgagatattcatgcaccggttcctgctgtcgag 407 ||||||||| || || ||||||||||| || ||| |||| ||||| Sbjct: 426 catgtttgctgcagaaatattcatgcatcgcttcttgctctcgag 470
>dbj|AK073335.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033026F13, full insert sequence Length = 1704 Score = 73.8 bits (37), Expect = 6e-10 Identities = 133/165 (80%) Strand = Plus / Plus Query: 243 agggagtgctggtgatgtgctggaggatgatcctgtcgggaggctgaaggtgtacgtcta 302 ||||||||| || |||||||| || || ||||||| |||||| ||||||| | | |||| Sbjct: 365 agggagtgccggcgatgtgctcgaagacaatcctgtggggaggttgaaggtcttcatcta 424 Query: 303 cgagctgcccaccaagtacaacaagaagatggtggccaaggactccaggtgcctcagcca 362 || || || | |||||||||||||||||||| |||||| || ||||||||| || Sbjct: 425 tgacctcccaagaaagtacaacaagaagatggtcaacaaggatccccggtgcctcaatca 484 Query: 363 catgtttgccgccgagatattcatgcaccggttcctgctgtcgag 407 ||||||||| || || ||||||||||| || ||| |||| ||||| Sbjct: 485 catgtttgctgcagaaatattcatgcatcgcttcttgctctcgag 529
>emb|AL731591.3|OSJN00240 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0039C07, complete sequence Length = 166410 Score = 73.8 bits (37), Expect = 6e-10 Identities = 133/165 (80%) Strand = Plus / Plus Query: 243 agggagtgctggtgatgtgctggaggatgatcctgtcgggaggctgaaggtgtacgtcta 302 ||||||||| || |||||||| || || ||||||| |||||| ||||||| | | |||| Sbjct: 150969 agggagtgccggcgatgtgctcgaagacaatcctgtggggaggttgaaggtcttcatcta 151028 Query: 303 cgagctgcccaccaagtacaacaagaagatggtggccaaggactccaggtgcctcagcca 362 || || || | |||||||||||||||||||| |||||| || ||||||||| || Sbjct: 151029 tgacctcccaagaaagtacaacaagaagatggtcaacaaggatccccggtgcctcaatca 151088 Query: 363 catgtttgccgccgagatattcatgcaccggttcctgctgtcgag 407 ||||||||| || || ||||||||||| || ||| |||| ||||| Sbjct: 151089 catgtttgctgcagaaatattcatgcatcgcttcttgctctcgag 151133 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 122 gctgcgggtgggcggcggcg 141 |||||||||||||||||||| Sbjct: 111535 gctgcgggtgggcggcggcg 111516
>gb|AY108460.1| Zea mays PCO105471 mRNA sequence Length = 598 Score = 67.9 bits (34), Expect = 4e-08 Identities = 97/118 (82%) Strand = Plus / Plus Query: 213 cgtcagggcccaggacaccgagaggatcgaagggagtgctggtgatgtgctggaggatga 272 ||||| ||| ||||| |||||| |||||||||| || |||||||||||| | || ||| | Sbjct: 384 cgtcacggcgcaggagaccgagcggatcgaaggaagcgctggtgatgtgttagaagataa 443 Query: 273 tcctgtcgggaggctgaaggtgtacgtctacgagctgcccaccaagtacaacaagaag 330 ||||| |||||||| ||||| | ||||| || || |||| ||| |||||||||||| Sbjct: 444 ccctgttgggaggctcaaggtctttgtctatgatctccccagcaaatacaacaagaag 501 Score = 65.9 bits (33), Expect = 1e-07 Identities = 42/45 (93%) Strand = Plus / Plus Query: 360 ccacatgtttgccgccgagatattcatgcaccggttcctgctgtc 404 ||||||||||||||||||||| ||||||||| |||||||| |||| Sbjct: 531 ccacatgtttgccgccgagatcttcatgcacaggttcctgttgtc 575
>dbj|AK072752.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023139D17, full insert sequence Length = 1244 Score = 63.9 bits (32), Expect = 6e-07 Identities = 47/52 (90%) Strand = Plus / Plus Query: 425 acccggaggaggccgactggttctacactccggtgtacaccacctgtgacct 476 |||||||||||||||||||||||||||| || | ||||||||||| ||||| Sbjct: 13 acccggaggaggccgactggttctacacacccgcctacaccacctgcgacct 64
>ref|NM_102508.2| Arabidopsis thaliana catalytic AT1G27440 mRNA, complete cds Length = 1525 Score = 54.0 bits (27), Expect = 5e-04 Identities = 69/83 (83%) Strand = Plus / Plus Query: 247 agtgctggtgatgtgctggaggatgatcctgtcgggaggctgaaggtgtacgtctacgag 306 |||||||||||||| ||||||||||||| || || | ||| ||||| || || || ||| Sbjct: 259 agtgctggtgatgttttggaggatgatccagtgggaaagcttaaggtttatgtatatgag 318 Query: 307 ctgcccaccaagtacaacaagaa 329 || || | ||||||||||||||| Sbjct: 319 cttccaagcaagtacaacaagaa 341
>ref|XM_466000.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1305 Score = 54.0 bits (27), Expect = 5e-04 Identities = 63/75 (84%) Strand = Plus / Plus Query: 315 caagtacaacaagaagatggtggccaaggactccaggtgcctcagccacatgtttgccgc 374 |||||| ||||||| ||| || |||||||| || | ||||||| |||||||||||| || Sbjct: 228 caagtataacaagaggatagtcgccaaggatccccgatgcctcaaccacatgtttgctgc 287 Query: 375 cgagatattcatgca 389 |||||||| ||||| Sbjct: 288 tgagatatttatgca 302
>gb|BT025555.1| Arabidopsis thaliana At1g27440 mRNA, complete cds Length = 1239 Score = 54.0 bits (27), Expect = 5e-04 Identities = 69/83 (83%) Strand = Plus / Plus Query: 247 agtgctggtgatgtgctggaggatgatcctgtcgggaggctgaaggtgtacgtctacgag 306 |||||||||||||| ||||||||||||| || || | ||| ||||| || || || ||| Sbjct: 97 agtgctggtgatgttttggaggatgatccagtgggaaagcttaaggtttatgtatatgag 156 Query: 307 ctgcccaccaagtacaacaagaa 329 || || | ||||||||||||||| Sbjct: 157 cttccaagcaagtacaacaagaa 179
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 54.0 bits (27), Expect = 5e-04 Identities = 63/75 (84%) Strand = Plus / Minus Query: 315 caagtacaacaagaagatggtggccaaggactccaggtgcctcagccacatgtttgccgc 374 |||||| ||||||| ||| || |||||||| || | ||||||| |||||||||||| || Sbjct: 18993853 caagtataacaagaggatagtcgccaaggatccccgatgcctcaaccacatgtttgctgc 18993794 Query: 375 cgagatattcatgca 389 |||||||| ||||| Sbjct: 18993793 tgagatatttatgca 18993779
>emb|BX814611.1|CNS0ADM0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB84ZD11 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1526 Score = 54.0 bits (27), Expect = 5e-04 Identities = 69/83 (83%) Strand = Plus / Plus Query: 247 agtgctggtgatgtgctggaggatgatcctgtcgggaggctgaaggtgtacgtctacgag 306 |||||||||||||| ||||||||||||| || || | ||| ||||| || || || ||| Sbjct: 259 agtgctggtgatgttttggaggatgatccagtgggaaagcttaaggtttatgtatatgag 318 Query: 307 ctgcccaccaagtacaacaagaa 329 || || | ||||||||||||||| Sbjct: 319 cttccaagcaagtacaacaagaa 341
>gb|BT022053.1| Arabidopsis thaliana At1g27440 gene, complete cds Length = 1424 Score = 54.0 bits (27), Expect = 5e-04 Identities = 69/83 (83%) Strand = Plus / Plus Query: 247 agtgctggtgatgtgctggaggatgatcctgtcgggaggctgaaggtgtacgtctacgag 306 |||||||||||||| ||||||||||||| || || | ||| ||||| || || || ||| Sbjct: 214 agtgctggtgatgttttggaggatgatccagtgggaaagcttaaggtttatgtatatgag 273 Query: 307 ctgcccaccaagtacaacaagaa 329 || || | ||||||||||||||| Sbjct: 274 cttccaagcaagtacaacaagaa 296
>gb|AC004557.2|AC004557 Genomic sequence for Arabidopsis thaliana BAC F17L21 from chromosome I, complete sequence Length = 99690 Score = 54.0 bits (27), Expect = 5e-04 Identities = 69/83 (83%) Strand = Plus / Minus Query: 247 agtgctggtgatgtgctggaggatgatcctgtcgggaggctgaaggtgtacgtctacgag 306 |||||||||||||| ||||||||||||| || || | ||| ||||| || || || ||| Sbjct: 74791 agtgctggtgatgttttggaggatgatccagtgggaaagcttaaggtttatgtatatgag 74732 Query: 307 ctgcccaccaagtacaacaagaa 329 || || | ||||||||||||||| Sbjct: 74731 cttccaagcaagtacaacaagaa 74709
>dbj|AP005842.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0003H22 Length = 68256 Score = 54.0 bits (27), Expect = 5e-04 Identities = 63/75 (84%) Strand = Plus / Minus Query: 315 caagtacaacaagaagatggtggccaaggactccaggtgcctcagccacatgtttgccgc 374 |||||| ||||||| ||| || |||||||| || | ||||||| |||||||||||| || Sbjct: 49174 caagtataacaagaggatagtcgccaaggatccccgatgcctcaaccacatgtttgctgc 49115 Query: 375 cgagatattcatgca 389 |||||||| ||||| Sbjct: 49114 tgagatatttatgca 49100
>ref|XM_483738.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1775 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 172 gcggcggcgctcacgctgctcct 194 ||||||||||||||||||||||| Sbjct: 747 gcggcggcgctcacgctgctcct 725
>ref|XM_483737.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2606 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 172 gcggcggcgctcacgctgctcct 194 ||||||||||||||||||||||| Sbjct: 1516 gcggcggcgctcacgctgctcct 1494
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Plus Query: 162 gctcgccctcgcggcggcgctcacgctgctc 192 ||||||| ||||||||||||| ||||||||| Sbjct: 221379 gctcgccgtcgcggcggcgctgacgctgctc 221409
>gb|AC147660.2| Pan troglodytes BAC clone CH251-389M10 from Y, complete sequence Length = 175868 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 132 ggcggcggcgatggggaagccgcgggc 158 |||||||||||||||| |||||||||| Sbjct: 147913 ggcggcggcgatgggggagccgcgggc 147939
>gb|AF521085.1| Streptomyces nanchangensis NS3226 polyether ionophore nanchangmycin biosynthetic gene cluster, complete sequence Length = 132544 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 169 ctcgcggcggcgctcacgctgct 191 ||||||||||||||||||||||| Sbjct: 114596 ctcgcggcggcgctcacgctgct 114618
>dbj|BS000664.2| Pan troglodytes chromosome Y clone: PTBY-007G10, complete sequence Length = 89389 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 132 ggcggcggcgatggggaagccgcgggc 158 |||||||||||||||| |||||||||| Sbjct: 33567 ggcggcggcgatgggggagccgcgggc 33593
>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence Length = 23952694 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 132 ggcggcggcgatggggaagccgcgggc 158 |||||||||||||||| |||||||||| Sbjct: 13887816 ggcggcggcgatgggggagccgcgggc 13887790 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 132 ggcggcggcgatggggaagccgcgggc 158 |||||||||||||||| |||||||||| Sbjct: 4087084 ggcggcggcgatgggggagccgcgggc 4087058
>gb|AC146250.5| Pan troglodytes BAC clone CH251-148B21 from chromosome y, complete sequence Length = 175351 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 132 ggcggcggcgatggggaagccgcgggc 158 |||||||||||||||| |||||||||| Sbjct: 166053 ggcggcggcgatgggggagccgcgggc 166079
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 172 gcggcggcgctcacgctgctcct 194 ||||||||||||||||||||||| Sbjct: 27839301 gcggcggcgctcacgctgctcct 27839279
>dbj|AP003928.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1150_A11 Length = 142010 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 172 gcggcggcgctcacgctgctcct 194 ||||||||||||||||||||||| Sbjct: 47379 gcggcggcgctcacgctgctcct 47357
>dbj|AK099715.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013085B05, full insert sequence Length = 2606 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 172 gcggcggcgctcacgctgctcct 194 ||||||||||||||||||||||| Sbjct: 1516 gcggcggcgctcacgctgctcct 1494
>dbj|AK106793.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-116-A11, full insert sequence Length = 1775 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 172 gcggcggcgctcacgctgctcct 194 ||||||||||||||||||||||| Sbjct: 747 gcggcggcgctcacgctgctcct 725
>ref|NM_196531.1| Oryza sativa (japonica cultivar-group) unknown protein (OSJNBa0053G13.5), mRNA Length = 1458 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 132 ggcggcggcgatggggaagccg 153 |||||||||||||||||||||| Sbjct: 183 ggcggcggcgatggggaagccg 204
>ref|XM_368410.1| Magnaporthe grisea 70-15 chromosome VI hypothetical protein (MG00834.4) partial mRNA Length = 987 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 162 gctcgccctcgcggcggcgctc 183 |||||||||||||||||||||| Sbjct: 379 gctcgccctcgcggcggcgctc 358
>gb|AC161825.13| Mus musculus 10 BAC RP23-35O24 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 199841 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 319 tacaacaagaagatggtggcca 340 |||||||||||||||||||||| Sbjct: 184328 tacaacaagaagatggtggcca 184349
>gb|AC158622.4| Mus musculus 10 BAC RP23-292G1 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 232339 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 319 tacaacaagaagatggtggcca 340 |||||||||||||||||||||| Sbjct: 161601 tacaacaagaagatggtggcca 161580
>gb|AC027662.2|AC027662 Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0053G13, complete sequence Length = 138245 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 132 ggcggcggcgatggggaagccg 153 |||||||||||||||||||||| Sbjct: 18402 ggcggcggcgatggggaagccg 18423
>dbj|AK110922.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-173-D03, full insert sequence Length = 1551 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 132 ggcggcggcgatggggaagccg 153 |||||||||||||||||||||| Sbjct: 569 ggcggcggcgatggggaagccg 590
>ref|NM_125578.2| Arabidopsis thaliana catalytic AT5G61840 mRNA, complete cds Length = 1672 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 247 agtgctggtgatgtgctggaggatgatcc 275 ||||||||||||||| |||| |||||||| Sbjct: 343 agtgctggtgatgtgttggaagatgatcc 371
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 42.1 bits (21), Expect = 2.1 Identities = 33/37 (89%) Strand = Plus / Plus Query: 147 gaagccgcgggcgatgctcgccctcgcggcggcgctc 183 ||||| ||||||||||| ||||||| |||||||||| Sbjct: 428245 gaagctgcgggcgatgcgcgccctcaaggcggcgctc 428281
>gb|AY219227.1| Leavenworthia crassa LEAFY-like protein (LFY) gene, complete cds Length = 6798 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Minus Query: 355 ctcagccacatgtttgccgccgagatattcatgcaccggtt 395 |||| |||||||||||| |||||||||| ||||| ||||| Sbjct: 433 ctcaaccacatgtttgctgccgagatatatatgcaacggtt 393
>emb|AJ505006.1|POL505006 Sorangium cellulosum spiG gene (partial), spiH gene, spiI gene, spiJ gene, spiK gene, spiL gene and spiZ gene Length = 48000 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 165 cgccctcgcggcggcgctcac 185 ||||||||||||||||||||| Sbjct: 10607 cgccctcgcggcggcgctcac 10627
>gb|AC080003.6| Homo sapiens BAC clone RP11-344F9 from 4, complete sequence Length = 187936 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 489 ccatccgttgcccttcaagcc 509 ||||||||||||||||||||| Sbjct: 1755 ccatccgttgcccttcaagcc 1775
>gb|AY066039.1| Arabidopsis thaliana AT5g61840/mac9_140 mRNA, complete cds Length = 1248 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 247 agtgctggtgatgtgctggaggatgatcc 275 ||||||||||||||| |||| |||||||| Sbjct: 106 agtgctggtgatgtgttggaagatgatcc 134
>gb|AY054180.1| Arabidopsis thaliana AT5g61840/mac9_140 mRNA, complete cds Length = 1664 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 247 agtgctggtgatgtgctggaggatgatcc 275 ||||||||||||||| |||| |||||||| Sbjct: 337 agtgctggtgatgtgttggaagatgatcc 365
>emb|BX831082.1|CNS0A0UL Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS56ZD10 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1651 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 247 agtgctggtgatgtgctggaggatgatcc 275 ||||||||||||||| |||| |||||||| Sbjct: 323 agtgctggtgatgtgttggaagatgatcc 351
>gb|AY087390.1| Arabidopsis thaliana clone 34861 mRNA, complete sequence Length = 1670 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 247 agtgctggtgatgtgctggaggatgatcc 275 ||||||||||||||| |||| |||||||| Sbjct: 343 agtgctggtgatgtgttggaagatgatcc 371
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 165 cgccctcgcggcggcgctcacgctg 189 ||||||||||||||||||| ||||| Sbjct: 4863513 cgccctcgcggcggcgctcgcgctg 4863537
>emb|BX005260.12| Zebrafish DNA sequence from clone DKEY-209F7 in linkage group 16, complete sequence Length = 197061 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 60 cccgtcccctctgtctcctcc 80 ||||||||||||||||||||| Sbjct: 106613 cccgtcccctctgtctcctcc 106633
>dbj|AB010069.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MAC9 Length = 57246 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 247 agtgctggtgatgtgctggaggatgatcc 275 ||||||||||||||| |||| |||||||| Sbjct: 46638 agtgctggtgatgtgttggaagatgatcc 46610
>ref|XM_469573.1| Oryza sativa (japonica cultivar-group), mRNA Length = 552 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 163 ctcgccctcgcggcggcgct 182 |||||||||||||||||||| Sbjct: 417 ctcgccctcgcggcggcgct 398
>ref|XM_479162.1| Oryza sativa (japonica cultivar-group), mRNA Length = 351 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 ggcggcggcgatggggaagc 151 |||||||||||||||||||| Sbjct: 50 ggcggcggcgatggggaagc 31
>ref|XM_472341.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 807 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 122 gctgcgggtgggcggcggcg 141 |||||||||||||||||||| Sbjct: 97 gctgcgggtgggcggcggcg 78
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 160 atgctcgccctcgcggcggcgctc 183 ||||||||| |||||||||||||| Sbjct: 75419 atgctcgccgtcgcggcggcgctc 75442
>ref|XM_366769.1| Magnaporthe grisea 70-15 chromosome VII hypothetical protein (MG02845.4) partial mRNA Length = 2148 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 406 agcgcgatccggaccatgaacccg 429 |||||||||||||||| ||||||| Sbjct: 2084 agcgcgatccggaccaggaacccg 2107
>ref|XM_368949.1| Magnaporthe grisea 70-15 chromosome VI hypothetical protein (MG00295.4) partial mRNA Length = 2451 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 122 gctgcgggtgggcggcggcg 141 |||||||||||||||||||| Sbjct: 2172 gctgcgggtgggcggcggcg 2191
>ref|XM_414217.1| PREDICTED: Gallus gallus similar to Growth-arrest-specific protein 8 (Growth arrest-specific 11) (LOC415858), mRNA Length = 1560 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 314 ccaagtacaacaagaagatg 333 |||||||||||||||||||| Sbjct: 577 ccaagtacaacaagaagatg 596
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 160 atgctcgccctcgcggcggcgctc 183 ||||||||| |||||||||||||| Sbjct: 624770 atgctcgccgtcgcggcggcgctc 624747
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 ctcgccctcgcggcggcgct 182 |||||||||||||||||||| Sbjct: 28802224 ctcgccctcgcggcggcgct 28802243
>ref|XM_846009.1| PREDICTED: Canis familiaris hypothetical protein LOC608874 (LOC608874), mRNA Length = 1725 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 338 ccaaggactccaggtgcctc 357 |||||||||||||||||||| Sbjct: 1575 ccaaggactccaggtgcctc 1594
>emb|AL591783.1|SME591783 Sinorhizobium meliloti 1021 complete chromosome; segment 2/12 Length = 306650 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 168 cctcgcggcggcgctcacgc 187 |||||||||||||||||||| Sbjct: 255033 cctcgcggcggcgctcacgc 255014
>emb|BX640440.1| Bordetella bronchiseptica strain RB50, complete genome; segment 4/16 Length = 349497 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 171 cgcggcggcgctcacgctgc 190 |||||||||||||||||||| Sbjct: 203776 cgcggcggcgctcacgctgc 203795
>emb|BX640425.1| Bordetella parapertussis strain 12822, complete genome; segment 3/14 Length = 348257 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 171 cgcggcggcgctcacgctgc 190 |||||||||||||||||||| Sbjct: 327820 cgcggcggcgctcacgctgc 327839
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 160 atgctcgccctcgcggcggcgctc 183 ||||||||| |||||||||||||| Sbjct: 433364 atgctcgccgtcgcggcggcgctc 433341
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 324 caagaagatggtggccaagg 343 |||||||||||||||||||| Sbjct: 753216 caagaagatggtggccaagg 753197
>dbj|AK145297.1| Mus musculus mammary gland RCB-0527 Jyg-MC(B) cDNA, RIKEN full-length enriched library, clone:G930040H22 product:hypothetical protein, full insert sequence Length = 1485 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 120 gagctgcgggtgggcggcgg 139 |||||||||||||||||||| Sbjct: 44 gagctgcgggtgggcggcgg 63
>gb|BC070471.1| Mus musculus coiled-coil domain containing 66, mRNA (cDNA clone MGC:99436 IMAGE:30626499), complete cds Length = 2960 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 120 gagctgcgggtgggcggcgg 139 |||||||||||||||||||| Sbjct: 5 gagctgcgggtgggcggcgg 24
>ref|NM_177111.2| Mus musculus coiled-coil domain containing 66 (Ccdc66), mRNA Length = 2960 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 120 gagctgcgggtgggcggcgg 139 |||||||||||||||||||| Sbjct: 5 gagctgcgggtgggcggcgg 24
>dbj|AK170006.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630007M22 product:hypothetical protein, full insert sequence Length = 2407 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 120 gagctgcgggtgggcggcgg 139 |||||||||||||||||||| Sbjct: 53 gagctgcgggtgggcggcgg 72
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 404 cgagcgcgatccggaccatg 423 |||||||||||||||||||| Sbjct: 2993927 cgagcgcgatccggaccatg 2993908
>gb|AC145875.3| Pan troglodytes BAC clone RP43-6O8 from chromosome 7, complete sequence Length = 179919 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 455 cggtgtacaccacctgtgac 474 |||||||||||||||||||| Sbjct: 73462 cggtgtacaccacctgtgac 73443
>emb|BX932390.2| Gallus gallus finished cDNA, clone ChEST97n24 Length = 1560 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 314 ccaagtacaacaagaagatg 333 |||||||||||||||||||| Sbjct: 577 ccaagtacaacaagaagatg 596
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 ggcggcggcgatggggaagc 151 |||||||||||||||||||| Sbjct: 25315181 ggcggcggcgatggggaagc 25315162
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 ctcgccctcgcggcggcgct 182 |||||||||||||||||||| Sbjct: 28893548 ctcgccctcgcggcggcgct 28893567
>dbj|AP006878.1| Thermococcus kodakarensis KOD1 DNA, complete genome Length = 2088737 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 320 acaacaagaagatggtggcc 339 |||||||||||||||||||| Sbjct: 2075674 acaacaagaagatggtggcc 2075655
>gb|AC154637.2| Mus musculus BAC clone RP23-303N14 from chromosome 14, complete sequence Length = 198799 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 120 gagctgcgggtgggcggcgg 139 |||||||||||||||||||| Sbjct: 54673 gagctgcgggtgggcggcgg 54654
>gb|AE004880.1| Pseudomonas aeruginosa PAO1, section 441 of 529 of the complete genome Length = 13518 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 132 ggcggcggcgatggggaagccgcg 155 ||||||||||||||| |||||||| Sbjct: 6484 ggcggcggcgatgggcaagccgcg 6461
>gb|AC091532.13| Oryza sativa chromosome 3 BAC OSJNBa0078A17 genomic sequence, complete sequence Length = 147344 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 ctcgccctcgcggcggcgct 182 |||||||||||||||||||| Sbjct: 109205 ctcgccctcgcggcggcgct 109224
>gb|AY190940.1| Drosophila erecta clone DERF01_19_N16 (D1428) genomic sequence Length = 43180 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 171 cgcggcggcgctcacgctgctcct 194 ||||||||| |||||||||||||| Sbjct: 30642 cgcggcggctctcacgctgctcct 30619
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 171 cgcggcggcgctcacgctgc 190 |||||||||||||||||||| Sbjct: 5815526 cgcggcggcgctcacgctgc 5815545
>dbj|AP006620.1| Nocardia farcinica IFM 10152 plasmid pNF2 DNA, complete sequence Length = 87093 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 165 cgccctcgcggcggcgctca 184 |||||||||||||||||||| Sbjct: 57819 cgccctcgcggcggcgctca 57838
>dbj|AP005198.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0616D06 Length = 153800 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 ggcggcggcgatggggaagc 151 |||||||||||||||||||| Sbjct: 131852 ggcggcggcgatggggaagc 131833
>dbj|AP004988.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:B1056G08 Length = 168173 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 ggcggcggcgatggggaagc 151 |||||||||||||||||||| Sbjct: 8271 ggcggcggcgatggggaagc 8252
>emb|X82151.1|CCPAX6DNA C.coturnix Pax-QNR gene Length = 1140 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 60 cccgtcccctctgtctcctc 79 |||||||||||||||||||| Sbjct: 327 cccgtcccctctgtctcctc 346
>dbj|AK109085.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-154-H09, full insert sequence Length = 1049 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 175 gcggcgctcacgctgctcct 194 |||||||||||||||||||| Sbjct: 743 gcggcgctcacgctgctcct 724
>dbj|AK101501.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033044C14, full insert sequence Length = 1854 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 122 gctgcgggtgggcggcggcg 141 |||||||||||||||||||| Sbjct: 591 gctgcgggtgggcggcggcg 572
>gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence Length = 3131724 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 151 ccgcgggcgatgctcgccctcgcg 174 |||||||||||||||||| ||||| Sbjct: 680351 ccgcgggcgatgctcgccatcgcg 680374
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 160 atgctcgccctcgcggcggcgctc 183 ||||||||| |||||||||||||| Sbjct: 413272 atgctcgccgtcgcggcggcgctc 413249
>gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome Length = 7215267 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 ggcggcggcgatggggaagc 151 |||||||||||||||||||| Sbjct: 5503989 ggcggcggcgatggggaagc 5503970
>emb|CT485787.6| Mouse DNA sequence from clone RP23-412N8 on chromosome 14, complete sequence Length = 210837 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 120 gagctgcgggtgggcggcgg 139 |||||||||||||||||||| Sbjct: 125928 gagctgcgggtgggcggcgg 125909
>emb|AL606921.6| Mouse DNA sequence from clone RP23-209C6 on chromosome 4, complete sequence Length = 173639 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 115 acggggagctgcgggtgggcggcg 138 |||| ||||||||||||||||||| Sbjct: 144199 acggtgagctgcgggtgggcggcg 144176 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,697,341 Number of Sequences: 3902068 Number of extensions: 4697341 Number of successful extensions: 100288 Number of sequences better than 10.0: 104 Number of HSP's better than 10.0 without gapping: 107 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 97926 Number of HSP's gapped (non-prelim): 2351 length of query: 599 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 576 effective length of database: 17,143,297,704 effective search space: 9874539477504 effective search space used: 9874539477504 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)