>UMP6_ARATH (Q9SX77) Unknown protein At1g47420, mitochondrial precursor|
          Length = 257

 Score = 62.0 bits (149), Expect = 6e-10
 Identities = 28/53 (52%), Positives = 37/53 (69%)
 Frame = +2

Query: 278 RMFSSNEKHLPPISDPKIETAFKDLMAASWNELPGSLVEEAKKEVSKATDDKA 436
           R FS +  H+P + D  +  AFKDLMAA W ELP ++V++AK  +SK TDDKA
Sbjct: 87  RRFSEDVSHMPEMEDSDVLNAFKDLMAADWAELPSAVVKDAKTAISKNTDDKA 139

>ATR_YEAST (P38111) Serine/threonine-protein kinase MEC1 (EC 2.7.11.1)|
            (DNA-damage checkpoint kinase MEC1) (Mitosis entry
            checkpoint protein 1) (ATR homolog)
          Length = 2368

 Score = 29.3 bits (64), Expect = 4.3
 Identities = 16/36 (44%), Positives = 24/36 (66%)
 Frame = +2

Query: 323  PKIETAFKDLMAASWNELPGSLVEEAKKEVSKATDD 430
            PK+ T + D+ AAS +E PG+     K+ +SKAT+D
Sbjct: 1849 PKVITFWLDIAAASISEAPGN----RKEMLSKATED 1880

>GPA8_DICDI (P34046) Guanine nucleotide-binding protein alpha-8 subunit (G|
           alpha-8)
          Length = 403

 Score = 29.3 bits (64), Expect = 4.3
 Identities = 15/40 (37%), Positives = 21/40 (52%)
 Frame = +2

Query: 311 PISDPKIETAFKDLMAASWNELPGSLVEEAKKEVSKATDD 430
           P+    I   +K  +  +W E  G L+EE KK + KAT D
Sbjct: 316 PLHTFHIAARYKKDIKYTWEEAKGILLEENKKVLMKATKD 355

>ISTA_PSEAE (P15025) Transposase for insertion sequence element IS21|
          Length = 390

 Score = 28.5 bits (62), Expect = 7.4
 Identities = 10/37 (27%), Positives = 20/37 (54%)
 Frame = +2

Query: 260 FSWNSRRMFSSNEKHLPPISDPKIETAFKDLMAASWN 370
           F     + F+  ++HL P+ D   +T++ D+   SW+
Sbjct: 273 FKETPEQRFALEQEHLQPLPDTDFDTSYFDIRHVSWD 309

>UBP8_YEAST (P50102) Ubiquitin carboxyl-terminal hydrolase 8 (EC 3.1.2.15)|
           (Ubiquitin thioesterase 8) (Ubiquitin-specific
           processing protease 8) (Deubiquitinating enzyme 8)
          Length = 471

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -1

Query: 61  CHLFSSSSPFVSLACGFGGC 2
           CH  +S + F+ L CGF GC
Sbjct: 49  CHEINSGATFMCLQCGFCGC 68


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 41,641,879
Number of Sequences: 219361
Number of extensions: 615577
Number of successful extensions: 2043
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2012
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2043
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2511994855
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)