ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart44a10
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1LGT_CITUN (Q9MB73) Limonoid UDP-glucosyltransferase (EC 2.4.1.21... 59 1e-08
2IAAG_MAIZE (Q41819) Indole-3-acetate beta-glucosyltransferase (E... 47 4e-05
3COGT2_ARATH (Q9SK82) Cytokinin-O-glucosyltransferase 2 (EC 2.4.1... 33 0.40
4GRN_RAT (P23785) Granulins precursor [Contains: Acrogranin; Gran... 32 1.2
5TISD_HUMAN (P47974) Butyrate response factor 2 (TIS11D protein) ... 31 2.6
6HMDH3_ORYSA (Q9XHL5) 3-hydroxy-3-methylglutaryl-coenzyme A reduc... 30 4.4
7MECA2_BACSU (P50734) Adapter protein mecA 2 30 4.4
8SRP54_HALSA (Q9HMN5) Signal recognition 54 kDa protein (SRP54) 30 4.4
9BLM_CHICK (Q9I920) Bloom syndrome protein homolog (EC 3.6.1.-) (... 30 4.4
10PMPC_CHLMU (Q9PJY1) Probable outer membrane protein pmpC precurs... 30 5.8
11SMI1_ASHGO (Q75AQ9) KNR4/SMI1 homolog 29 9.9

>LGT_CITUN (Q9MB73) Limonoid UDP-glucosyltransferase (EC 2.4.1.210) (Limonoid|
           glucosyltransferase) (Limonoid GTase) (LGTase)
          Length = 511

 Score = 58.5 bits (140), Expect = 1e-08
 Identities = 33/136 (24%), Positives = 66/136 (48%)
 Frame = +2

Query: 134 HFLVVTYPAQGHINPXXXXXXXXXXXTPGARVTVSTAVSACRKMFPXXXXXXXXXXXXXX 313
           H L+V++P  GH+NP           + G  +T++T  S  ++M                
Sbjct: 8   HVLLVSFPGHGHVNPLLRLGRLLA--SKGFFLTLTTPESFGKQMRKAGNFTYEPTPVGDG 65

Query: 314 GVRYVPYSDGYDGGFDKSAHDSTDYMSNLKVVGARTLDGVLARLRDAGTPVTQVVYTVLL 493
            +R+  + DG+D   D    D   YM+ L+++G + +  ++ +  +   PV+ ++    +
Sbjct: 66  FIRFEFFEDGWDED-DPRREDLDQYMAQLELIGKQVIPKIIKKSAEEYRPVSCLINNPFI 124

Query: 494 SWVADVARARGVPAAL 541
            WV+DVA + G+P+A+
Sbjct: 125 PWVSDVAESLGLPSAM 140



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>IAAG_MAIZE (Q41819) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121)|
           (IAA-Glu synthetase) ((Uridine
           5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl
           transferase)
          Length = 471

 Score = 47.0 bits (110), Expect = 4e-05
 Identities = 37/136 (27%), Positives = 50/136 (36%)
 Frame = +2

Query: 128 APHFLVVTYPAQGHINPXXXXXXXXXXXTPGARVTVSTAVSACRKMFPXXXXXXXXXXXX 307
           APH LVV +P QGH+NP           + G   T+ T     R                
Sbjct: 2   APHVLVVPFPGQGHMNPMVQFAKRLA--SKGVATTLVTTRFIQR-----------TADVD 48

Query: 308 XXGVRYVPYSDGYDGGFDKSAHDSTDYMSNLKVVGARTLDGVLARLRDAGTPVTQVVYTV 487
                    SDG+D G   SA    +Y+       + +L  ++     +    T VVY  
Sbjct: 49  AHPAMVEAISDGHDEGGFASAAGVAEYLEKQAAAASASLASLVEARASSADAFTCVVYDS 108

Query: 488 LLSWVADVARARGVPA 535
              WV  VAR  G+PA
Sbjct: 109 YEDWVLPVARRMGLPA 124



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>COGT2_ARATH (Q9SK82) Cytokinin-O-glucosyltransferase 2 (EC 2.4.1.-) (Zeatin|
           O-glucosyltransferase 2)
          Length = 489

 Score = 33.5 bits (75), Expect = 0.40
 Identities = 36/149 (24%), Positives = 50/149 (33%), Gaps = 9/149 (6%)
 Frame = +2

Query: 125 EAPHFLVVTYPAQGHINPXXXXXXXXXXXTPGARVTVSTAVSACRKMFPXXXXXXXXXXX 304
           + PH + V YPAQGHINP              AR    T V+                  
Sbjct: 10  QKPHVVCVPYPAQGHINPMMRVAKLLH-----ARGFYVTFVNTVYNHNRFLRSRGSNALD 64

Query: 305 XXXGVRYVPYSDGYDGGFDKSAHDSTDYMSNLKVVGARTLDGVLARLR---------DAG 457
                R+   +DG             D   ++  +   T+   LA  R         D  
Sbjct: 65  GLPSFRFESIADGL-------PETDMDATQDITALCESTMKNCLAPFRELLQRINAGDNV 117

Query: 458 TPVTQVVYTVLLSWVADVARARGVPAALY 544
            PV+ +V    +S+  DVA   GVP  L+
Sbjct: 118 PPVSCIVSDGCMSFTLDVAEELGVPEVLF 146



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>GRN_RAT (P23785) Granulins precursor [Contains: Acrogranin; Granulin-1|
           (Granulin G); Granulin-2 (Granulin F); Granulin-3
           (Granulin B) (Epithelin-2); Granulin-4 (Granulin A)
           (Epithelin-1); Granulin-5 (Granulin C); Granulin-6
           (Granulin D); Granulin-7 (Gran
          Length = 588

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 13/33 (39%), Positives = 16/33 (48%)
 Frame = -3

Query: 109 GRHCCVRAMRCECKKTRAYQVSKSVLTGVGCGG 11
           G+HCC R   C        Q+S S+L  V C G
Sbjct: 95  GQHCCPRGFHCSADGKSCSQISDSLLGAVQCPG 127



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>TISD_HUMAN (P47974) Butyrate response factor 2 (TIS11D protein) (EGF-response|
           factor 2) (ERF-2)
          Length = 492

 Score = 30.8 bits (68), Expect = 2.6
 Identities = 17/34 (50%), Positives = 18/34 (52%)
 Frame = +3

Query: 435 SRASATPAPPSRRWCTLCSSPGSPTSRARAASPP 536
           S  S TP PPS    + CSS  S  S A AAS P
Sbjct: 282 SPTSRTPPPPSCSSASSCSSSASSCSSASAASTP 315



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>HMDH3_ORYSA (Q9XHL5) 3-hydroxy-3-methylglutaryl-coenzyme A reductase 3 (EC|
           1.1.1.34) (HMG-CoA reductase 3)
          Length = 561

 Score = 30.0 bits (66), Expect = 4.4
 Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
 Frame = +3

Query: 411 GPARWTACSRASATPAPPSR-RWCTLCSSPGSPTSRAR 521
           GPAR ++ + A A P PPS    C+L  SP    +R R
Sbjct: 105 GPARGSSAAAAVAPPPPPSSPAQCSLLGSPHDDAARER 142



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>MECA2_BACSU (P50734) Adapter protein mecA 2|
          Length = 194

 Score = 30.0 bits (66), Expect = 4.4
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = +2

Query: 371 HDSTDYMSNLKVVGARTLDGVLARLRDAGTPVTQVVY 481
           H    Y  +L+ +G+ T +GV+A L + G P T  +Y
Sbjct: 135 HYDGQYFLSLEDLGSHTAEGVVAVLAEYGNPTTLTIY 171



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>SRP54_HALSA (Q9HMN5) Signal recognition 54 kDa protein (SRP54)|
          Length = 460

 Score = 30.0 bits (66), Expect = 4.4
 Identities = 16/41 (39%), Positives = 19/41 (46%)
 Frame = -3

Query: 529 DAARARDVGDPGEEHSVHHLRDGGAGVAEAREHAVQRAGPH 407
           D A     G+P  +  V   RDG A  A+A  H V  AG H
Sbjct: 149 DRAEVDFYGEPDSDDPVQIARDGLAATADADVHIVDTAGRH 189



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>BLM_CHICK (Q9I920) Bloom syndrome protein homolog (EC 3.6.1.-) (Fragment)|
          Length = 1142

 Score = 30.0 bits (66), Expect = 4.4
 Identities = 18/45 (40%), Positives = 20/45 (44%)
 Frame = +3

Query: 411 GPARWTACSRASATPAPPSRRWCTLCSSPGSPTSRARAASPPRST 545
           GP  W AC +      P SR    LCS PG   S     S P+ST
Sbjct: 131 GPRNWKACVQQD----PSSRPGTPLCSGPGQGVS--SVGSTPKST 169



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>PMPC_CHLMU (Q9PJY1) Probable outer membrane protein pmpC precursor|
           (Polymorphic membrane protein C)
          Length = 1460

 Score = 29.6 bits (65), Expect = 5.8
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = -3

Query: 535 GGDAARARDVGDPGEEHSVHHLRDGGAGVAEA 440
           GGDA  +     PG + S++H+  GGA   EA
Sbjct: 531 GGDAGSSSQPSTPGSDSSINHVIGGGAIYGEA 562



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>SMI1_ASHGO (Q75AQ9) KNR4/SMI1 homolog|
          Length = 657

 Score = 28.9 bits (63), Expect = 9.9
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = +3

Query: 447 ATPAPPSRRWCTLCSSPGSPTSRARAASPPR 539
           ATP P +       S+PGSP++ A A  PP+
Sbjct: 430 ATPNPMTAPTVIRVSTPGSPSAAAEAPEPPK 460


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 49,386,606
Number of Sequences: 219361
Number of extensions: 778260
Number of successful extensions: 3191
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3067
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3183
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4373119116
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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