ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart44a10 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_550389.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1455 Score = 190 bits (96), Expect = 3e-45 Identities = 132/144 (91%) Strand = Plus / Plus Query: 125 gaggcgccgcacttcctcgtggtcacgtacccggcgcagggccacatcaacccggcgcgc 184 ||||||| ||||||||||| ||||||||||| || |||||||||||||||||||||||| Sbjct: 25 gaggcgcatcacttcctcgtcgtcacgtaccccgcccagggccacatcaacccggcgcgc 84 Query: 185 cacctcgcgctgcgcctgctccgcgccacgccgggcgcccgcgtcaccgtctccaccgcc 244 |||||||||| |||||| |||||| |||||||||||||||||||| ||||||||||| Sbjct: 85 cacctcgcgcggcgcctcgcgcgcgccgcgccgggcgcccgcgtcaccatctccaccgcc 144 Query: 245 gtctccgcctgccgcaagatgttc 268 |||||||||||||||||||||||| Sbjct: 145 gtctccgcctgccgcaagatgttc 168 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 323 tacgtgccctactccgacggctacgacggcggcttcgacaagtccgcgcacgacagc 379 |||| ||| ||||||||||||||||||| ||||||||||| | | | |||||||||| Sbjct: 226 tacgcgccgtactccgacggctacgacgacggcttcgacagggcggtgcacgacagc 282
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 190 bits (96), Expect = 3e-45 Identities = 132/144 (91%) Strand = Plus / Minus Query: 125 gaggcgccgcacttcctcgtggtcacgtacccggcgcagggccacatcaacccggcgcgc 184 ||||||| ||||||||||| ||||||||||| || |||||||||||||||||||||||| Sbjct: 4153619 gaggcgcatcacttcctcgtcgtcacgtaccccgcccagggccacatcaacccggcgcgc 4153560 Query: 185 cacctcgcgctgcgcctgctccgcgccacgccgggcgcccgcgtcaccgtctccaccgcc 244 |||||||||| |||||| |||||| |||||||||||||||||||| ||||||||||| Sbjct: 4153559 cacctcgcgcggcgcctcgcgcgcgccgcgccgggcgcccgcgtcaccatctccaccgcc 4153500 Query: 245 gtctccgcctgccgcaagatgttc 268 |||||||||||||||||||||||| Sbjct: 4153499 gtctccgcctgccgcaagatgttc 4153476 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 323 tacgtgccctactccgacggctacgacggcggcttcgacaagtccgcgcacgacagc 379 |||| ||| ||||||||||||||||||| ||||||||||| | | | |||||||||| Sbjct: 4153418 tacgcgccgtactccgacggctacgacgacggcttcgacagggcggtgcacgacagc 4153362 Score = 44.1 bits (22), Expect = 0.47 Identities = 31/34 (91%) Strand = Plus / Plus Query: 307 cgccgccggcgtccgctacgtgccctactccgac 340 ||||||| ||||||||| || ||||||||||||| Sbjct: 21734047 cgccgcccgcgtccgctccgcgccctactccgac 21734080 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 298 ccacgtcgacgccgccggcgt 318 ||||||||||||||||||||| Sbjct: 35948572 ccacgtcgacgccgccggcgt 35948552
>dbj|AP002524.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0406H10 Length = 156419 Score = 190 bits (96), Expect = 3e-45 Identities = 132/144 (91%) Strand = Plus / Minus Query: 125 gaggcgccgcacttcctcgtggtcacgtacccggcgcagggccacatcaacccggcgcgc 184 ||||||| ||||||||||| ||||||||||| || |||||||||||||||||||||||| Sbjct: 100590 gaggcgcatcacttcctcgtcgtcacgtaccccgcccagggccacatcaacccggcgcgc 100531 Query: 185 cacctcgcgctgcgcctgctccgcgccacgccgggcgcccgcgtcaccgtctccaccgcc 244 |||||||||| |||||| |||||| |||||||||||||||||||| ||||||||||| Sbjct: 100530 cacctcgcgcggcgcctcgcgcgcgccgcgccgggcgcccgcgtcaccatctccaccgcc 100471 Query: 245 gtctccgcctgccgcaagatgttc 268 |||||||||||||||||||||||| Sbjct: 100470 gtctccgcctgccgcaagatgttc 100447 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 323 tacgtgccctactccgacggctacgacggcggcttcgacaagtccgcgcacgacagc 379 |||| ||| ||||||||||||||||||| ||||||||||| | | | |||||||||| Sbjct: 100389 tacgcgccgtactccgacggctacgacgacggcttcgacagggcggtgcacgacagc 100333
>ref|XM_476066.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1473 Score = 77.8 bits (39), Expect = 3e-11 Identities = 57/63 (90%) Strand = Plus / Plus Query: 132 cgcacttcctcgtggtcacgtacccggcgcagggccacatcaacccggcgcgccacctcg 191 ||||||||||| | |||||||||||| ||||||||||| ||| |||||||||||||||| Sbjct: 20 cgcacttcctcatcgtcacgtacccgtcgcagggccacgtcacgccggcgcgccacctcg 79 Query: 192 cgc 194 ||| Sbjct: 80 cgc 82 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 332 tactccgacggctacgacggcggcttcgac 361 ||||||||||||||||||||||| |||||| Sbjct: 214 tactccgacggctacgacggcgggttcgac 243 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 243 ccgtctccgcctgccgcaagatgttccc 270 |||||||||| | ||||||||||||||| Sbjct: 128 ccgtctccgcgttccgcaagatgttccc 155
>gb|AC130610.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0478F09, complete sequence Length = 145070 Score = 77.8 bits (39), Expect = 3e-11 Identities = 57/63 (90%) Strand = Plus / Minus Query: 132 cgcacttcctcgtggtcacgtacccggcgcagggccacatcaacccggcgcgccacctcg 191 ||||||||||| | |||||||||||| ||||||||||| ||| |||||||||||||||| Sbjct: 111019 cgcacttcctcatcgtcacgtacccgtcgcagggccacgtcacgccggcgcgccacctcg 110960 Query: 192 cgc 194 ||| Sbjct: 110959 cgc 110957 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 332 tactccgacggctacgacggcggcttcgac 361 ||||||||||||||||||||||| |||||| Sbjct: 110825 tactccgacggctacgacggcgggttcgac 110796 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 243 ccgtctccgcctgccgcaagatgttccc 270 |||||||||| | ||||||||||||||| Sbjct: 110911 ccgtctccgcgttccgcaagatgttccc 110884
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 77.8 bits (39), Expect = 3e-11 Identities = 57/63 (90%) Strand = Plus / Minus Query: 132 cgcacttcctcgtggtcacgtacccggcgcagggccacatcaacccggcgcgccacctcg 191 ||||||||||| | |||||||||||| ||||||||||| ||| |||||||||||||||| Sbjct: 4743014 cgcacttcctcatcgtcacgtacccgtcgcagggccacgtcacgccggcgcgccacctcg 4742955 Query: 192 cgc 194 ||| Sbjct: 4742954 cgc 4742952 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 332 tactccgacggctacgacggcggcttcgac 361 ||||||||||||||||||||||| |||||| Sbjct: 4742820 tactccgacggctacgacggcgggttcgac 4742791 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 239 accgccgtctccgcctgccgc 259 ||||||||||||||||||||| Sbjct: 28138667 accgccgtctccgcctgccgc 28138647 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 450 acgccggcacccccgtcacg 469 |||||||||||||||||||| Sbjct: 16568179 acgccggcacccccgtcacg 16568198 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 243 ccgtctccgcctgccgcaagatgttccc 270 |||||||||| | ||||||||||||||| Sbjct: 4742906 ccgtctccgcgttccgcaagatgttccc 4742879
>gb|AC135425.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0453H11, complete sequence Length = 187956 Score = 77.8 bits (39), Expect = 3e-11 Identities = 57/63 (90%) Strand = Plus / Minus Query: 132 cgcacttcctcgtggtcacgtacccggcgcagggccacatcaacccggcgcgccacctcg 191 ||||||||||| | |||||||||||| ||||||||||| ||| |||||||||||||||| Sbjct: 15422 cgcacttcctcatcgtcacgtacccgtcgcagggccacgtcacgccggcgcgccacctcg 15363 Query: 192 cgc 194 ||| Sbjct: 15362 cgc 15360 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 332 tactccgacggctacgacggcggcttcgac 361 ||||||||||||||||||||||| |||||| Sbjct: 15228 tactccgacggctacgacggcgggttcgac 15199 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 243 ccgtctccgcctgccgcaagatgttccc 270 |||||||||| | ||||||||||||||| Sbjct: 15314 ccgtctccgcgttccgcaagatgttccc 15287
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 65.9 bits (33), Expect = 1e-07 Identities = 80/93 (86%), Gaps = 2/93 (2%) Strand = Plus / Plus Query: 161 cagggccacatcaacccggcgcgccacctcgcgctgcgcctgctccgcgcca-cgccggg 219 ||||||||||||||||||||||||| |||||| ||||||| | ||| | |||||| Sbjct: 22926712 cagggccacatcaacccggcgcgccgcctcgccgcgcgcctgatg-gcgtcggcgccggc 22926770 Query: 220 cgcccgcgtcaccgtctccaccgccgtctccgc 252 ||| ||||||||| ||||||||||||||||||| Sbjct: 22926771 cgcgcgcgtcaccttctccaccgccgtctccgc 22926803 Score = 56.0 bits (28), Expect = 1e-04 Identities = 94/116 (81%) Strand = Plus / Minus Query: 130 gccgcacttcctcgtggtcacgtacccggcgcagggccacatcaacccggcgcgccacct 189 |||||||||||||||| |||||| |||| |||||||||||| ||||||| || ||| Sbjct: 22951334 gccgcacttcctcgtgctcacgttcccgctccagggccacatcgcgccggcgctccgcct 22951275 Query: 190 cgcgctgcgcctgctccgcgccacgccgggcgcccgcgtcaccgtctccaccgccg 245 ||| |||||||||| |||| | || | ||| | ||||||| |||||||||||| Sbjct: 22951274 cgccaggcgcctgctcgccgccgcccccgacgcgctcgtcaccttctccaccgccg 22951219 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Plus Query: 133 gcacttcctcgtggtcacgtacccggcgcagggccac 169 |||| ||||||| ||| |||||||||||||||||||| Sbjct: 9986093 gcacgtcctcgtcgtcccgtacccggcgcagggccac 9986129 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 150 cgtacccggcgcagggccacatcaacccg 178 |||||||||||||||||||| ||| |||| Sbjct: 9931998 cgtacccggcgcagggccacctcatcccg 9932026
>dbj|AP003617.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0502H06 Length = 165630 Score = 65.9 bits (33), Expect = 1e-07 Identities = 80/93 (86%), Gaps = 2/93 (2%) Strand = Plus / Plus Query: 161 cagggccacatcaacccggcgcgccacctcgcgctgcgcctgctccgcgcca-cgccggg 219 ||||||||||||||||||||||||| |||||| ||||||| | ||| | |||||| Sbjct: 101534 cagggccacatcaacccggcgcgccgcctcgccgcgcgcctgatg-gcgtcggcgccggc 101592 Query: 220 cgcccgcgtcaccgtctccaccgccgtctccgc 252 ||| ||||||||| ||||||||||||||||||| Sbjct: 101593 cgcgcgcgtcaccttctccaccgccgtctccgc 101625 Score = 56.0 bits (28), Expect = 1e-04 Identities = 94/116 (81%) Strand = Plus / Minus Query: 130 gccgcacttcctcgtggtcacgtacccggcgcagggccacatcaacccggcgcgccacct 189 |||||||||||||||| |||||| |||| |||||||||||| ||||||| || ||| Sbjct: 126156 gccgcacttcctcgtgctcacgttcccgctccagggccacatcgcgccggcgctccgcct 126097 Query: 190 cgcgctgcgcctgctccgcgccacgccgggcgcccgcgtcaccgtctccaccgccg 245 ||| |||||||||| |||| | || | ||| | ||||||| |||||||||||| Sbjct: 126096 cgccaggcgcctgctcgccgccgcccccgacgcgctcgtcaccttctccaccgccg 126041
>dbj|AK060513.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-019-F01, full insert sequence Length = 1734 Score = 65.9 bits (33), Expect = 1e-07 Identities = 80/93 (86%), Gaps = 2/93 (2%) Strand = Plus / Plus Query: 161 cagggccacatcaacccggcgcgccacctcgcgctgcgcctgctccgcgcca-cgccggg 219 ||||||||||||||||||||||||| |||||| ||||||| | ||| | |||||| Sbjct: 94 cagggccacatcaacccggcgcgccgcctcgccgcgcgcctgatg-gcgtcggcgccggc 152 Query: 220 cgcccgcgtcaccgtctccaccgccgtctccgc 252 ||| ||||||||| ||||||||||||||||||| Sbjct: 153 cgcgcgcgtcaccttctccaccgccgtctccgc 185
>ref|XM_464540.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1437 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 133 gcacttcctcgtggtcacgtacccggcgcagggccacatcaacccggc 180 |||||||||||| ||| ||||||| | |||||||||||||||||||| Sbjct: 12 gcacttcctcgtcgtcgcgtaccctggccagggccacatcaacccggc 59 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 322 ctacgtgccctactccgacggctacgacg 350 |||||| || ||||||||||||||||||| Sbjct: 207 ctacgtcccgtactccgacggctacgacg 235
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 133 gcacttcctcgtggtcacgtacccggcgcagggccacatcaacccggc 180 |||||||||||| ||| ||||||| | |||||||||||||||||||| Sbjct: 5775960 gcacttcctcgtcgtcgcgtaccctggccagggccacatcaacccggc 5776007 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 150 cgtacccggcgcagggccacatcaacccg 178 |||||||||||||||| ||||||| |||| Sbjct: 31824594 cgtacccggcgcaggggcacatcaccccg 31824622 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 322 ctacgtgccctactccgacggctacgacg 350 |||||| || ||||||||||||||||||| Sbjct: 5776155 ctacgtcccgtactccgacggctacgacg 5776183 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 150 cgtacccggcgcagggccac 169 |||||||||||||||||||| Sbjct: 31807468 cgtacccggcgcagggccac 31807449
>dbj|AP004571.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0652A05 Length = 150455 Score = 56.0 bits (28), Expect = 1e-04 Identities = 94/116 (81%) Strand = Plus / Minus Query: 130 gccgcacttcctcgtggtcacgtacccggcgcagggccacatcaacccggcgcgccacct 189 |||||||||||||||| |||||| |||| |||||||||||| ||||||| || ||| Sbjct: 17819 gccgcacttcctcgtgctcacgttcccgctccagggccacatcgcgccggcgctccgcct 17760 Query: 190 cgcgctgcgcctgctccgcgccacgccgggcgcccgcgtcaccgtctccaccgccg 245 ||| |||||||||| |||| | || | ||| | ||||||| |||||||||||| Sbjct: 17759 cgccaggcgcctgctcgccgccgcccccgacgcgctcgtcaccttctccaccgccg 17704
>dbj|AP005008.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0544H11 Length = 178376 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 133 gcacttcctcgtggtcacgtacccggcgcagggccacatcaacccggc 180 |||||||||||| ||| ||||||| | |||||||||||||||||||| Sbjct: 5762 gcacttcctcgtcgtcgcgtaccctggccagggccacatcaacccggc 5809 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 322 ctacgtgccctactccgacggctacgacg 350 |||||| || ||||||||||||||||||| Sbjct: 5957 ctacgtcccgtactccgacggctacgacg 5985
>dbj|AP004045.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1135_F06 Length = 102230 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 133 gcacttcctcgtggtcacgtacccggcgcagggccacatcaacccggc 180 |||||||||||| ||| ||||||| | |||||||||||||||||||| Sbjct: 65474 gcacttcctcgtcgtcgcgtaccctggccagggccacatcaacccggc 65521 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 322 ctacgtgccctactccgacggctacgacg 350 |||||| || ||||||||||||||||||| Sbjct: 65669 ctacgtcccgtactccgacggctacgacg 65697
>dbj|AK120020.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-186-C02, full insert sequence Length = 1581 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Minus Query: 133 gcacttcctcgtggtcacgtacccggcgcagggccacatcaacccggc 180 |||||||||||| ||| ||||||| | |||||||||||||||||||| Sbjct: 1345 gcacttcctcgtcgtcgcgtaccctggccagggccacatcaacccggc 1298 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 322 ctacgtgccctactccgacggctacgacg 350 |||||| || ||||||||||||||||||| Sbjct: 1150 ctacgtcccgtactccgacggctacgacg 1122
>dbj|AK062590.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-100-G10, full insert sequence Length = 1663 Score = 56.0 bits (28), Expect = 1e-04 Identities = 94/116 (81%) Strand = Plus / Plus Query: 130 gccgcacttcctcgtggtcacgtacccggcgcagggccacatcaacccggcgcgccacct 189 |||||||||||||||| |||||| |||| |||||||||||| ||||||| || ||| Sbjct: 104 gccgcacttcctcgtgctcacgttcccgctccagggccacatcgcgccggcgctccgcct 163 Query: 190 cgcgctgcgcctgctccgcgccacgccgggcgcccgcgtcaccgtctccaccgccg 245 ||| |||||||||| |||| | || | ||| | ||||||| |||||||||||| Sbjct: 164 cgccaggcgcctgctcgccgccgcccccgacgcgctcgtcaccttctccaccgccg 219
>dbj|AB113664.1| Iris hollandica Ih5GT mRNA for anthocyanin 5-O-glucosyltransferase, complete cds Length = 1568 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 158 gcgcagggccacatcaacccggcgcgccacctcgc 192 ||||||||||||||||||||||| |||| |||||| Sbjct: 39 gcgcagggccacatcaacccggcccgccgcctcgc 73
>ref|XM_483068.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1467 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 130 gccgcacttcctcgtggtcacgtacccggcgcagggccacat 171 ||||||| ||||||| || |||||||||||||||||||||| Sbjct: 75 gccgcacgtcctcgtcgtgccgtacccggcgcagggccacat 116
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 130 gccgcacttcctcgtggtcacgtacccggcgcagggccacat 171 ||||||| ||||||| || |||||||||||||||||||||| Sbjct: 24136062 gccgcacgtcctcgtcgtgccgtacccggcgcagggccacat 24136103 Score = 44.1 bits (22), Expect = 0.47 Identities = 25/26 (96%) Strand = Plus / Plus Query: 144 tggtcacgtacccggcgcagggccac 169 ||||| |||||||||||||||||||| Sbjct: 19285644 tggtcccgtacccggcgcagggccac 19285669
>dbj|AP004620.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0605H02 Length = 175547 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 130 gccgcacttcctcgtggtcacgtacccggcgcagggccacat 171 ||||||| ||||||| || |||||||||||||||||||||| Sbjct: 2401 gccgcacgtcctcgtcgtgccgtacccggcgcagggccacat 2442
>dbj|AP004557.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0028A08 Length = 150818 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 130 gccgcacttcctcgtggtcacgtacccggcgcagggccacat 171 ||||||| ||||||| || |||||||||||||||||||||| Sbjct: 89548 gccgcacgtcctcgtcgtgccgtacccggcgcagggccacat 89589
>dbj|AP006050.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0021H05 Length = 159111 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Plus Query: 133 gcacttcctcgtggtcacgtacccggcgcagggccac 169 |||| ||||||| ||| |||||||||||||||||||| Sbjct: 59658 gcacgtcctcgtcgtcccgtacccggcgcagggccac 59694 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 150 cgtacccggcgcagggccacatcaacccg 178 |||||||||||||||||||| ||| |||| Sbjct: 5563 cgtacccggcgcagggccacctcatcccg 5591
>ref|XM_471860.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1479 Score = 48.1 bits (24), Expect = 0.030 Identities = 24/24 (100%) Strand = Plus / Plus Query: 150 cgtacccggcgcagggccacatca 173 |||||||||||||||||||||||| Sbjct: 35 cgtacccggcgcagggccacatca 58
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 48.1 bits (24), Expect = 0.030 Identities = 24/24 (100%) Strand = Plus / Plus Query: 288 cggcggtggaccacgtcgacgccg 311 |||||||||||||||||||||||| Sbjct: 12484785 cggcggtggaccacgtcgacgccg 12484808 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 74 ctcgcatcgcatcgcacgcacgca 97 ||||| |||||||||||||||||| Sbjct: 28882436 ctcgcgtcgcatcgcacgcacgca 28882459 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 240 ccgccgtctccgcctgccgc 259 |||||||||||||||||||| Sbjct: 28713378 ccgccgtctccgcctgccgc 28713397 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 235 ctccaccgccgtctccgcct 254 |||||||||||||||||||| Sbjct: 20377382 ctccaccgccgtctccgcct 20377401 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 329 ccctactccgacggctacga 348 |||||||||||||||||||| Sbjct: 4331130 ccctactccgacggctacga 4331111
>gb|AC134885.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OJ1125B03, from chromosome 3, complete sequence Length = 124550 Score = 48.1 bits (24), Expect = 0.030 Identities = 24/24 (100%) Strand = Plus / Minus Query: 288 cggcggtggaccacgtcgacgccg 311 |||||||||||||||||||||||| Sbjct: 103156 cggcggtggaccacgtcgacgccg 103133
>emb|AL731634.4|OSJN00276 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0033P05, complete sequence Length = 120635 Score = 48.1 bits (24), Expect = 0.030 Identities = 24/24 (100%) Strand = Plus / Minus Query: 150 cgtacccggcgcagggccacatca 173 |||||||||||||||||||||||| Sbjct: 57764 cgtacccggcgcagggccacatca 57741 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 150 cgtacccggcgcagggccac 169 |||||||||||||||||||| Sbjct: 45150 cgtacccggcgcagggccac 45131
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 48.1 bits (24), Expect = 0.030 Identities = 24/24 (100%) Strand = Plus / Minus Query: 150 cgtacccggcgcagggccacatca 173 |||||||||||||||||||||||| Sbjct: 15164869 cgtacccggcgcagggccacatca 15164846 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 272 gacgacgcggacgccgcggcgg 293 |||||||||||||||||||||| Sbjct: 34994320 gacgacgcggacgccgcggcgg 34994341 Score = 44.1 bits (22), Expect = 0.47 Identities = 25/26 (96%) Strand = Plus / Plus Query: 144 tggtcacgtacccggcgcagggccac 169 ||||| |||||||||||||||||||| Sbjct: 14830389 tggtcccgtacccggcgcagggccac 14830414 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 270 cggacgacgcggacgccgcggcgg 293 ||||||||||||||| |||||||| Sbjct: 28129569 cggacgacgcggacggcgcggcgg 28129546 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 150 cgtacccggcgcagggccac 169 |||||||||||||||||||| Sbjct: 15152255 cgtacccggcgcagggccac 15152236 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 150 cgtacccggcgcagggccac 169 |||||||||||||||||||| Sbjct: 14787161 cgtacccggcgcagggccac 14787142 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 150 cgtacccggcgcagggccac 169 |||||||||||||||||||| Sbjct: 14735630 cgtacccggcgcagggccac 14735649 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 150 cgtacccggcgcagggccac 169 |||||||||||||||||||| Sbjct: 14723125 cgtacccggcgcagggccac 14723144 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 155 ccggcgcagggccacatcaacccg 178 ||||||||||||||||| |||||| Sbjct: 7117783 ccggcgcagggccacatgaacccg 7117760 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 155 ccggcgcagggccacatcaacccg 178 ||||||||||||||||| |||||| Sbjct: 6990815 ccggcgcagggccacatgaacccg 6990792
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 48.1 bits (24), Expect = 0.030 Identities = 24/24 (100%) Strand = Plus / Plus Query: 288 cggcggtggaccacgtcgacgccg 311 |||||||||||||||||||||||| Sbjct: 12481548 cggcggtggaccacgtcgacgccg 12481571 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 74 ctcgcatcgcatcgcacgcacgca 97 ||||| |||||||||||||||||| Sbjct: 28973858 ctcgcgtcgcatcgcacgcacgca 28973881 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 240 ccgccgtctccgcctgccgc 259 |||||||||||||||||||| Sbjct: 28804702 ccgccgtctccgcctgccgc 28804721 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 235 ctccaccgccgtctccgcct 254 |||||||||||||||||||| Sbjct: 20370411 ctccaccgccgtctccgcct 20370430 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 329 ccctactccgacggctacga 348 |||||||||||||||||||| Sbjct: 4331245 ccctactccgacggctacga 4331226
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 75 tcgcatcgcatcgcacgcacgca 97 ||||||||||||||||||||||| Sbjct: 10224788 tcgcatcgcatcgcacgcacgca 10224810 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Minus Query: 271 ggacgacgcggacgccgcggcg 292 |||||||||||||||||||||| Sbjct: 21424107 ggacgacgcggacgccgcggcg 21424086 Score = 44.1 bits (22), Expect = 0.47 Identities = 25/26 (96%) Strand = Plus / Plus Query: 330 cctactccgacggctacgacggcggc 355 ||||||||||||||||||||| |||| Sbjct: 19927363 cctactccgacggctacgacgccggc 19927388 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 152 tacccggcgcagggccacatcaacccgg 179 |||||| | ||||||||||||||||||| Sbjct: 19919415 tacccgtcccagggccacatcaacccgg 19919442
>dbj|AP005554.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1118_A10 Length = 95161 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 75 tcgcatcgcatcgcacgcacgca 97 ||||||||||||||||||||||| Sbjct: 25937 tcgcatcgcatcgcacgcacgca 25959
>dbj|AK066014.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013049M21, full insert sequence Length = 3416 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 271 ggacgacgcggacgccgcggcgg 293 ||||||||||||||||||||||| Sbjct: 569 ggacgacgcggacgccgcggcgg 591
>ref|XM_482293.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1494 Score = 44.1 bits (22), Expect = 0.47 Identities = 25/26 (96%) Strand = Plus / Plus Query: 144 tggtcacgtacccggcgcagggccac 169 ||||| |||||||||||||||||||| Sbjct: 65 tggtcccgtacccggcgcagggccac 90
>ref|XM_474412.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2718 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 272 gacgacgcggacgccgcggcgg 293 |||||||||||||||||||||| Sbjct: 514 gacgacgcggacgccgcggcgg 535
>ref|XM_471830.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1428 Score = 44.1 bits (22), Expect = 0.47 Identities = 25/26 (96%) Strand = Plus / Plus Query: 144 tggtcacgtacccggcgcagggccac 169 ||||| |||||||||||||||||||| Sbjct: 65 tggtcccgtacccggcgcagggccac 90
>ref|NM_193585.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 963 Score = 44.1 bits (22), Expect = 0.47 Identities = 31/34 (91%) Strand = Plus / Plus Query: 307 cgccgccggcgtccgctacgtgccctactccgac 340 ||||||| ||||||||| || ||||||||||||| Sbjct: 426 cgccgcccgcgtccgctccgcgccctactccgac 459
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 44.1 bits (22), Expect = 0.47 Identities = 28/30 (93%) Strand = Plus / Minus Query: 418 cacgctggacggcgtgctcgcgcgcctccg 447 |||||||||||||||||||| |||||||| Sbjct: 509817 cacgctggacggcgtgctcgaacgcctccg 509788
>gb|AE016816.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome III, complete sequence Length = 907057 Score = 44.1 bits (22), Expect = 0.47 Identities = 28/30 (93%) Strand = Plus / Minus Query: 187 cctcgcgctgcgcctgctccgcgccacgcc 216 ||||||| ||||||||||||||||| |||| Sbjct: 731502 cctcgcgatgcgcctgctccgcgccccgcc 731473 Score = 44.1 bits (22), Expect = 0.47 Identities = 25/26 (96%) Strand = Plus / Minus Query: 328 gccctactccgacggctacgacggcg 353 |||||||||||||| ||||||||||| Sbjct: 635419 gccctactccgacgtctacgacggcg 635394
>emb|AL663021.4|OSJN00218 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0041M06, complete sequence Length = 107014 Score = 44.1 bits (22), Expect = 0.47 Identities = 25/26 (96%) Strand = Plus / Plus Query: 144 tggtcacgtacccggcgcagggccac 169 ||||| |||||||||||||||||||| Sbjct: 84327 tggtcccgtacccggcgcagggccac 84352 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 150 cgtacccggcgcagggccac 169 |||||||||||||||||||| Sbjct: 41099 cgtacccggcgcagggccac 41080
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 44.1 bits (22), Expect = 0.47 Identities = 25/26 (96%) Strand = Plus / Plus Query: 420 cgctggacggcgtgctcgcgcgcctc 445 |||||||||||||||| ||||||||| Sbjct: 1845885 cgctggacggcgtgctggcgcgcctc 1845910 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 289 ggcggtggaccacgtcgacgccgccggcg 317 ||||||||||| ||| ||||||||||||| Sbjct: 3534466 ggcggtggacctcgtggacgccgccggcg 3534438 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 185 cacctcgcgctgcgcctgctccgc 208 |||||||||||||||| ||||||| Sbjct: 2446258 cacctcgcgctgcgccagctccgc 2446235
>dbj|AP006173.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0217C03 Length = 58309 Score = 44.1 bits (22), Expect = 0.47 Identities = 25/26 (96%) Strand = Plus / Plus Query: 330 cctactccgacggctacgacggcggc 355 ||||||||||||||||||||| |||| Sbjct: 34449 cctactccgacggctacgacgccggc 34474 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 152 tacccggcgcagggccacatcaacccgg 179 |||||| | ||||||||||||||||||| Sbjct: 26501 tacccgtcccagggccacatcaacccgg 26528
>dbj|AP005679.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1210_A07 Length = 131394 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Minus Query: 271 ggacgacgcggacgccgcggcg 292 |||||||||||||||||||||| Sbjct: 41212 ggacgacgcggacgccgcggcg 41191
>dbj|AP003141.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0002B05 Length = 141275 Score = 44.1 bits (22), Expect = 0.47 Identities = 31/34 (91%) Strand = Plus / Plus Query: 307 cgccgccggcgtccgctacgtgccctactccgac 340 ||||||| ||||||||| || ||||||||||||| Sbjct: 86098 cgccgcccgcgtccgctccgcgccctactccgac 86131
>dbj|AP006525.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0498F03 Length = 54025 Score = 44.1 bits (22), Expect = 0.47 Identities = 25/26 (96%) Strand = Plus / Plus Query: 330 cctactccgacggctacgacggcggc 355 ||||||||||||||||||||| |||| Sbjct: 1511 cctactccgacggctacgacgccggc 1536
>dbj|AK121725.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033082A13, full insert sequence Length = 1654 Score = 44.1 bits (22), Expect = 0.47 Identities = 25/26 (96%) Strand = Plus / Plus Query: 330 cctactccgacggctacgacggcggc 355 ||||||||||||||||||||| |||| Sbjct: 251 cctactccgacggctacgacgccggc 276
>dbj|AP004636.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0685B10 Length = 148544 Score = 44.1 bits (22), Expect = 0.47 Identities = 25/26 (96%) Strand = Plus / Plus Query: 144 tggtcacgtacccggcgcagggccac 169 ||||| |||||||||||||||||||| Sbjct: 15087 tggtcccgtacccggcgcagggccac 15112
>dbj|AP003872.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1118_A03 Length = 109873 Score = 44.1 bits (22), Expect = 0.47 Identities = 25/26 (96%) Strand = Plus / Plus Query: 144 tggtcacgtacccggcgcagggccac 169 ||||| |||||||||||||||||||| Sbjct: 58657 tggtcccgtacccggcgcagggccac 58682
>ref|NM_208915.1| Eremothecium gossypii ACR160Cp (ACR160C), mRNA Length = 1293 Score = 44.1 bits (22), Expect = 0.47 Identities = 25/26 (96%) Strand = Plus / Plus Query: 328 gccctactccgacggctacgacggcg 353 |||||||||||||| ||||||||||| Sbjct: 852 gccctactccgacgtctacgacggcg 877
>ref|NM_208973.1| Eremothecium gossypii ACR218Wp (ACR218W), mRNA Length = 4710 Score = 44.1 bits (22), Expect = 0.47 Identities = 28/30 (93%) Strand = Plus / Minus Query: 187 cctcgcgctgcgcctgctccgcgccacgcc 216 ||||||| ||||||||||||||||| |||| Sbjct: 70 cctcgcgatgcgcctgctccgcgccccgcc 41
>gb|AY542311.1| Sorghum bicolor clone SB20O07 b1-1, b1-2, putative genetic modifier, hypothetical protein, putative NAM protein, putative cis-zeatin O-glucosyltransferases, putative small nuclear ribonucleoprotein, putative cis-zeatin O-glucosyltransferase, putative glutathione peroxidase, putative copper-exporting ATPases, putative serine/threonine dehydratase, and putative actin depolymerizing factor genes, complete cds; and hypothetical protein gene, partial cds Length = 157237 Score = 44.1 bits (22), Expect = 0.47 Identities = 25/26 (96%) Strand = Plus / Plus Query: 150 cgtacccggcgcagggccacatcaac 175 |||||||||||||||||||| ||||| Sbjct: 95325 cgtacccggcgcagggccacctcaac 95350
>dbj|AK064395.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-108-G04, full insert sequence Length = 1726 Score = 44.1 bits (22), Expect = 0.47 Identities = 25/26 (96%) Strand = Plus / Plus Query: 330 cctactccgacggctacgacggcggc 355 ||||||||||||||||||||| |||| Sbjct: 254 cctactccgacggctacgacgccggc 279
>emb|AL732343.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0913C04, complete sequence Length = 94152 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 272 gacgacgcggacgccgcggcgg 293 |||||||||||||||||||||| Sbjct: 27470 gacgacgcggacgccgcggcgg 27491
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 44.1 bits (22), Expect = 0.47 Identities = 28/30 (93%) Strand = Plus / Minus Query: 418 cacgctggacggcgtgctcgcgcgcctccg 447 |||||||||||||||||||| |||||||| Sbjct: 521961 cacgctggacggcgtgctcgaacgcctccg 521932
>emb|AL606651.3|OSJN00092 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0088H09, complete sequence Length = 145391 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 272 gacgacgcggacgccgcggcgg 293 |||||||||||||||||||||| Sbjct: 53370 gacgacgcggacgccgcggcgg 53391
>ref|XM_506982.1| PREDICTED Oryza sativa (japonica cultivar-group), P0627E03.33 mRNA Length = 1676 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 150 cgtacccggcgcagggccacatcaacccg 178 |||||||||||||||| ||||||| |||| Sbjct: 123 cgtacccggcgcaggggcacatcaccccg 151
>ref|XM_467869.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1659 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 150 cgtacccggcgcagggccacatcaacccg 178 |||||||||||||||| ||||||| |||| Sbjct: 126 cgtacccggcgcaggggcacatcaccccg 154
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 336 ccgacggctacgacggcggct 356 ||||||||||||||||||||| Sbjct: 2422118 ccgacggctacgacggcggct 2422138
>gb|AE014291.4| Brucella suis 1330 chromosome I, complete sequence Length = 2107794 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 283 cgccgcggcggtggaccacgtcgacgccg 311 ||||| |||||||||| |||||||||||| Sbjct: 63041 cgccgtggcggtggacgacgtcgacgccg 63013
>gb|AC120990.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0040E06, complete sequence Length = 160907 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 239 accgccgtctccgcctgccgc 259 ||||||||||||||||||||| Sbjct: 71342 accgccgtctccgcctgccgc 71322
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome Length = 3928089 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 422 ctggacggcgtgctcgcgcgcctccgcga 450 ||||||||||||||| ||||||| ||||| Sbjct: 3792442 ctggacggcgtgctcacgcgcctgcgcga 3792414 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 336 ccgacggctacgacggcggct 356 ||||||||||||||||||||| Sbjct: 1500403 ccgacggctacgacggcggct 1500423
>gb|AC146585.18| Medicago truncatula clone mth2-68o3, complete sequence Length = 124526 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 329 ccctactccgacggctacgacggcggctt 357 |||| ||||||||||||||||| |||||| Sbjct: 114222 cccttctccgacggctacgacgacggctt 114194
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 444 tccgcgacgccggcacccccg 464 ||||||||||||||||||||| Sbjct: 195323 tccgcgacgccggcacccccg 195343
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence Length = 3806533 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 336 ccgacggctacgacggcggct 356 ||||||||||||||||||||| Sbjct: 2137700 ccgacggctacgacggcggct 2137680
>emb|BX640443.1| Bordetella bronchiseptica strain RB50, complete genome; segment 7/16 Length = 346274 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 178 ggcgcgccacctcgcgctgcgcctg 202 |||||||||||||| |||||||||| Sbjct: 32280 ggcgcgccacctcgtgctgcgcctg 32304
>emb|BX640430.1| Bordetella parapertussis strain 12822, complete genome; segment 8/14 Length = 348014 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 178 ggcgcgccacctcgcgctgcgcctg 202 |||||||||||||| |||||||||| Sbjct: 296158 ggcgcgccacctcgtgctgcgcctg 296182
>emb|BX640421.1| Bordetella pertussis strain Tohama I, complete genome; segment 11/12 Length = 349726 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 178 ggcgcgccacctcgcgctgcgcctg 202 |||||||||||||| |||||||||| Sbjct: 267221 ggcgcgccacctcgtgctgcgcctg 267245
>emb|AL732516.6| Mouse DNA sequence from clone RP23-403H17 on chromosome 11 Contains a novel gene, complete sequence Length = 99659 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 20 acccaccccagtaaggacact 40 ||||||||||||||||||||| Sbjct: 88852 acccaccccagtaaggacact 88872
>gb|AE012313.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 221 of 460 of the complete genome Length = 12227 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 226 cgtcaccgtctccaccgccgtctcc 250 ||||||| ||||||||||||||||| Sbjct: 9530 cgtcaccatctccaccgccgtctcc 9554 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 226 cgtcaccgtctccaccgccgtctcc 250 ||||||| ||||||||||||||||| Sbjct: 3778 cgtcaccatctccaccgccgtctcc 3754 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 231 ccgtctccaccgccgtctcc 250 |||||||||||||||||||| Sbjct: 9583 ccgtctccaccgccgtctcc 9602 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 231 ccgtctccaccgccgtctcc 250 |||||||||||||||||||| Sbjct: 9571 ccgtctccaccgccgtctcc 9590 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 231 ccgtctccaccgccgtctcc 250 |||||||||||||||||||| Sbjct: 3737 ccgtctccaccgccgtctcc 3718 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 231 ccgtctccaccgccgtctcc 250 |||||||||||||||||||| Sbjct: 3725 ccgtctccaccgccgtctcc 3706
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 296 gaccacgtcgacgccgccggc 316 ||||||||||||||||||||| Sbjct: 732462 gaccacgtcgacgccgccggc 732442
>gb|AC016780.6| Genomic Sequence For Oryza sativa (japonica cultivar-group) cultivar Nipponbare Clone OSJNBa0061K21 From Chromosome 10, complete sequence Length = 112721 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 231 ccgtctccaccgccgtctccgcctgccgc 259 ||||||||||||||||| ||||| ||||| Sbjct: 33014 ccgtctccaccgccgtcgccgcccgccgc 32986
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 226 cgtcaccgtctccaccgccgtctcc 250 ||||||| ||||||||||||||||| Sbjct: 2534600 cgtcaccatctccaccgccgtctcc 2534576 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 231 ccgtctccaccgccgtctcc 250 |||||||||||||||||||| Sbjct: 2534559 ccgtctccaccgccgtctcc 2534540 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 231 ccgtctccaccgccgtctcc 250 |||||||||||||||||||| Sbjct: 2534547 ccgtctccaccgccgtctcc 2534528
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 231 ccgtctccaccgccgtctccgcctgccgc 259 ||||||||||||||||| ||||| ||||| Sbjct: 14093376 ccgtctccaccgccgtcgccgcccgccgc 14093348
>gb|AE009622.1| Brucella melitensis 16M chromosome I, section 179 of 195 of the complete sequence Length = 14598 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 283 cgccgcggcggtggaccacgtcgacgccg 311 ||||| |||||||||| |||||||||||| Sbjct: 5643 cgccgtggcggtggacgacgtcgacgccg 5671
>gb|AF546154.1| Streptomyces sp. 171/Eco105 UnbL (unbL), UnbV (unbV), UnbU (unbU), PksE (pksE), and TebC (tebC) genes, complete cds Length = 10246 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 429 gcgtgctcgcgcgcctccgcg 449 ||||||||||||||||||||| Sbjct: 791 gcgtgctcgcgcgcctccgcg 771
>dbj|AP003231.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0031D11 Length = 138108 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 298 ccacgtcgacgccgccggcgt 318 ||||||||||||||||||||| Sbjct: 47250 ccacgtcgacgccgccggcgt 47230
>gb|AE017223.1| Brucella abortus biovar 1 str. 9-941 chromosome I, complete sequence Length = 2124241 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 283 cgccgcggcggtggaccacgtcgacgccg 311 ||||| |||||||||| |||||||||||| Sbjct: 62685 cgccgtggcggtggacgacgtcgacgccg 62657
>dbj|AP005695.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0063H02 Length = 152326 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 150 cgtacccggcgcagggccacatcaacccg 178 |||||||||||||||||||| ||| |||| Sbjct: 128633 cgtacccggcgcagggccacctcatcccg 128661
>emb|AJ421511.1|REU421511 Ralstonia eutropha aceB gene for malate synthase Length = 2100 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 336 ccgacggctacgacggcggct 356 ||||||||||||||||||||| Sbjct: 1310 ccgacggctacgacggcggct 1330
>dbj|AP005012.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0627E03 Length = 159861 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 150 cgtacccggcgcagggccacatcaacccg 178 |||||||||||||||| ||||||| |||| Sbjct: 120392 cgtacccggcgcaggggcacatcaccccg 120420 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 150 cgtacccggcgcagggccac 169 |||||||||||||||||||| Sbjct: 103266 cgtacccggcgcagggccac 103247
>gb|AF229187.1|AF229187 Oryza sativa subsp. japonica BAC clone nbxb0032I20, complete sequence Length = 144651 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 231 ccgtctccaccgccgtctccgcctgccgc 259 ||||||||||||||||| ||||| ||||| Sbjct: 109505 ccgtctccaccgccgtcgccgcccgccgc 109477
>dbj|AK104985.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-107-F12, full insert sequence Length = 1677 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 150 cgtacccggcgcagggccacatcaacccg 178 |||||||||||||||| ||||||| |||| Sbjct: 123 cgtacccggcgcaggggcacatcaccccg 151
>dbj|AK073587.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033052B15, full insert sequence Length = 1659 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 150 cgtacccggcgcagggccacatcaacccg 178 |||||||||||||||| ||||||| |||| Sbjct: 126 cgtacccggcgcaggggcacatcaccccg 154
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 336 ccgacggctacgacggcggct 356 ||||||||||||||||||||| Sbjct: 1453177 ccgacggctacgacggcggct 1453197 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 303 tcgacgccgccggcgtccgc 322 |||||||||||||||||||| Sbjct: 3247675 tcgacgccgccggcgtccgc 3247656
>dbj|AK063413.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-115-B06, full insert sequence Length = 1196 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 239 accgccgtctccgcctgccgc 259 ||||||||||||||||||||| Sbjct: 89 accgccgtctccgcctgccgc 109
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 336 ccgacggctacgacggcggct 356 ||||||||||||||||||||| Sbjct: 2257610 ccgacggctacgacggcggct 2257590
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 336 ccgacggctacgacggcggct 356 ||||||||||||||||||||| Sbjct: 3599094 ccgacggctacgacggcggct 3599114 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 290 gcggtggaccacgtcgacgccgccggcg 317 ||||| || ||||||||||||||||||| Sbjct: 4215805 gcggtcgaacacgtcgacgccgccggcg 4215832
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 231 ccgtctccaccgccgtctccgcctgccgc 259 ||||||||||||||||| ||||| ||||| Sbjct: 14101618 ccgtctccaccgccgtcgccgcccgccgc 14101590
>gb|U10884.1|BPU10884 Bacteriophage phi-Lf adsorption protein (III) gene, complete cds Length = 1171 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 226 cgtcaccgtctccaccgccgtctcc 250 ||||||| ||||||||||||||||| Sbjct: 797 cgtcaccatctccaccgccgtctcc 773 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 231 ccgtctccaccgccgtctcc 250 |||||||||||||||||||| Sbjct: 756 ccgtctccaccgccgtctcc 737 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 231 ccgtctccaccgccgtctcc 250 |||||||||||||||||||| Sbjct: 744 ccgtctccaccgccgtctcc 725
>emb|AM040264.1| Brucella melitensis biovar Abortus chromosome I, complete sequence, strain 2308 Length = 2121359 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 283 cgccgcggcggtggaccacgtcgacgccg 311 ||||| |||||||||| |||||||||||| Sbjct: 59086 cgccgtggcggtggacgacgtcgacgccg 59058
>ref|NM_127536.2| Arabidopsis thaliana protein binding AT2G19780 mRNA, complete cds Length = 1397 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 226 cgtcaccgtctccaccgccg 245 |||||||||||||||||||| Sbjct: 165 cgtcaccgtctccaccgccg 146
>ref|XM_474839.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1389 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 155 ccggcgcagggccacatcaacccg 178 ||||||||||||||||| |||||| Sbjct: 61 ccggcgcagggccacatgaacccg 84
>ref|XM_474827.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1008 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 155 ccggcgcagggccacatcaacccg 178 ||||||||||||||||| |||||| Sbjct: 61 ccggcgcagggccacatgaacccg 84
>ref|XM_471827.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1494 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 150 cgtacccggcgcagggccac 169 |||||||||||||||||||| Sbjct: 53 cgtacccggcgcagggccac 72
>ref|XM_471859.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1491 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 150 cgtacccggcgcagggccac 169 |||||||||||||||||||| Sbjct: 50 cgtacccggcgcagggccac 69
>ref|XM_471822.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1431 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 150 cgtacccggcgcagggccac 169 |||||||||||||||||||| Sbjct: 8 cgtacccggcgcagggccac 27
>ref|XM_471823.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1491 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 150 cgtacccggcgcagggccac 169 |||||||||||||||||||| Sbjct: 50 cgtacccggcgcagggccac 69
>ref|XM_467864.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1597 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 150 cgtacccggcgcagggccac 169 |||||||||||||||||||| Sbjct: 59 cgtacccggcgcagggccac 78
>ref|XM_469560.1| Oryza sativa (japonica cultivar-group), mRNA Length = 399 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 240 ccgccgtctccgcctgccgc 259 |||||||||||||||||||| Sbjct: 116 ccgccgtctccgcctgccgc 97
>ref|XM_470558.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1005 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 329 ccctactccgacggctacga 348 |||||||||||||||||||| Sbjct: 871 ccctactccgacggctacga 890
>ref|XM_477378.1| Oryza sativa (japonica cultivar-group), mRNA Length = 555 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 234 tctccaccgccgtctccgcc 253 |||||||||||||||||||| Sbjct: 341 tctccaccgccgtctccgcc 360
>ref|XM_473500.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1056 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 270 cggacgacgcggacgccgcggcgg 293 ||||||||||||||| |||||||| Sbjct: 220 cggacgacgcggacggcgcggcgg 197
>gb|AC104711.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1320_D10, complete sequence Length = 134183 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 450 acgccggcacccccgtcacg 469 |||||||||||||||||||| Sbjct: 66918 acgccggcacccccgtcacg 66937
>gb|AF377946.3| Oryza sativa (japonica cultivar-group) chromosome 3, BAC clone OSJNBa0031O09, complete sequence Length = 161339 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 74 ctcgcatcgcatcgcacgcacgca 97 ||||| |||||||||||||||||| Sbjct: 147748 ctcgcgtcgcatcgcacgcacgca 147771
>gb|DQ182154.1| Uncultured bacterium clone SRF50 putative nitrite reductase (nirS) gene, partial cds Length = 413 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 345 acgacggcggcttcgacaag 364 |||||||||||||||||||| Sbjct: 95 acgacggcggcttcgacaag 114
>gb|DQ182116.1| Uncultured bacterium clone SRP25 putative nitrite reductase (nirS) gene, partial cds Length = 413 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 345 acgacggcggcttcgacaag 364 |||||||||||||||||||| Sbjct: 95 acgacggcggcttcgacaag 114
>gb|AY583452.1| Uncultured bacterium clone DGGE band PS2D nitrite reductase (nirK) gene, partial cds Length = 414 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 345 acgacggcggcttcgacaag 364 |||||||||||||||||||| Sbjct: 96 acgacggcggcttcgacaag 115
>gb|AY583450.1| Uncultured bacterium clone DGGE band KS2E nitrite reductase (nirK) gene, partial cds Length = 413 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 345 acgacggcggcttcgacaag 364 |||||||||||||||||||| Sbjct: 95 acgacggcggcttcgacaag 114
>gb|AC147426.2| Oryza sativa chromosome 3 B1377B10 genomic sequence, complete sequence Length = 184366 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 74 ctcgcatcgcatcgcacgcacgca 97 ||||| |||||||||||||||||| Sbjct: 65731 ctcgcgtcgcatcgcacgcacgca 65754
>ref|XM_613872.2| PREDICTED: Bos taurus similar to teratocarcinoma expressed, serine rich (LOC534193), mRNA Length = 894 Score = 40.1 bits (20), Expect = 7.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 112 ggagcgcgtgggggaggcgccgcacttcctcg 143 ||||||||||||||||||| || |||||||| Sbjct: 196 ggagcgcgtgggggaggcggcgtgcttcctcg 227
>gb|AY386264.1| Orf virus strain OV-SA00, complete genome Length = 139962 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 423 tggacggcgtgctcgcgcgc 442 |||||||||||||||||||| Sbjct: 42663 tggacggcgtgctcgcgcgc 42682
>gb|AY386263.1| Orf virus strain OV-IA82, complete genome Length = 137241 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 423 tggacggcgtgctcgcgcgc 442 |||||||||||||||||||| Sbjct: 41528 tggacggcgtgctcgcgcgc 41547
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 418 cacgctggacggcgtgctcg 437 |||||||||||||||||||| Sbjct: 4617157 cacgctggacggcgtgctcg 4617176
>emb|AL591783.1|SME591783 Sinorhizobium meliloti 1021 complete chromosome; segment 2/12 Length = 306650 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 268 cccggacgacgcggacgccg 287 |||||||||||||||||||| Sbjct: 129729 cccggacgacgcggacgccg 129748
>emb|CR730782.2|CNS0GQTF Tetraodon nigroviridis full-length cDNA Length = 1512 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 406 cgtgggggcccgcacgctgg 425 |||||||||||||||||||| Sbjct: 541 cgtgggggcccgcacgctgg 560
>emb|CR694574.1|CNS0FYVU Tetraodon nigroviridis full-length cDNA Length = 1372 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 406 cgtgggggcccgcacgctgg 425 |||||||||||||||||||| Sbjct: 493 cgtgggggcccgcacgctgg 512
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence Length = 4895836 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 337 cgacggctacgacggcggct 356 |||||||||||||||||||| Sbjct: 3090831 cgacggctacgacggcggct 3090850
>emb|BX572598.1| Rhodopseudomonas palustris CGA009 complete genome; segment 6/16 Length = 346879 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 179 gcgcgccacctcgcgctgcg 198 |||||||||||||||||||| Sbjct: 301658 gcgcgccacctcgcgctgcg 301639
>emb|AL939122.1|SCO939122 Streptomyces coelicolor A3(2) complete genome; segment 19/29 Length = 311000 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 gacgacgcggacgccgcggc 291 |||||||||||||||||||| Sbjct: 292589 gacgacgcggacgccgcggc 292608
>emb|AL939114.1|SCO939114 Streptomyces coelicolor A3(2) complete genome; segment 11/29 Length = 313800 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 150 cgtacccggcgcagggccac 169 |||||||||||||||||||| Sbjct: 183526 cgtacccggcgcagggccac 183507
>emb|AL606694.3|OSJN00110 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0078D11, complete sequence Length = 115006 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 270 cggacgacgcggacgccgcggcgg 293 ||||||||||||||| |||||||| Sbjct: 16006 cggacgacgcggacggcgcggcgg 15983
>emb|AL606687.3|OSJN00087 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0084K11, complete sequence Length = 147806 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 270 cggacgacgcggacgccgcggcgg 293 ||||||||||||||| |||||||| Sbjct: 136794 cggacgacgcggacggcgcggcgg 136771
>emb|AL606590.3|OSJN00031 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0052O21, complete sequence Length = 166475 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 155 ccggcgcagggccacatcaacccg 178 ||||||||||||||||| |||||| Sbjct: 138974 ccggcgcagggccacatgaacccg 138951 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 155 ccggcgcagggccacatcaacccg 178 ||||||||||||||||| |||||| Sbjct: 12006 ccggcgcagggccacatgaacccg 11983
>gb|AC090433.10| Chlamydomonas reinhardtii clone cr-19b23, complete sequence Length = 118183 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 181 gcgccacctcgcgctgcgcctgctccgc 208 ||||| ||||||||||||||| |||||| Sbjct: 29452 gcgccgcctcgcgctgcgcctcctccgc 29479
>gb|AE012040.1| Xanthomonas axonopodis pv. citri str. 306, section 418 of 469 of the complete genome Length = 10691 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 418 cacgctggacggcgtgctcg 437 |||||||||||||||||||| Sbjct: 2478 cacgctggacggcgtgctcg 2497
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome Length = 4712337 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 172 caacccggcgcgccacctcgcgct 195 ||||| |||||||||||||||||| Sbjct: 968379 caacctggcgcgccacctcgcgct 968402
>gb|AC005169.3| Arabidopsis thaliana chromosome 2 clone F6F22 map mi148, complete sequence Length = 126386 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 226 cgtcaccgtctccaccgccg 245 |||||||||||||||||||| Sbjct: 99485 cgtcaccgtctccaccgccg 99466
>gb|DQ184476.1| Orf virus strain NZ2, complete genome Length = 137820 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 423 tggacggcgtgctcgcgcgc 442 |||||||||||||||||||| Sbjct: 41918 tggacggcgtgctcgcgcgc 41937
>gb|AY254902.1| Orf virus strain Orf-11 G2R-like protein mRNA, complete cds Length = 1139 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 423 tggacggcgtgctcgcgcgc 442 |||||||||||||||||||| Sbjct: 929 tggacggcgtgctcgcgcgc 948
>gb|AC079633.9|AC079633 Genomic Sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0032G08, from Chromosome 3, complete sequence Length = 122052 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 329 ccctactccgacggctacga 348 |||||||||||||||||||| Sbjct: 95367 ccctactccgacggctacga 95386
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 tctccaccgccgtctccgcc 253 |||||||||||||||||||| Sbjct: 9964673 tctccaccgccgtctccgcc 9964654
>emb|BX818896.1|CNS0A9TN Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB24ZB02 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1355 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 226 cgtcaccgtctccaccgccg 245 |||||||||||||||||||| Sbjct: 137 cgtcaccgtctccaccgccg 118
>gb|AC084319.5|AC084319 Oryza sativa chromosome 3 BAC OSJNBa0004B24 genomic sequence, complete sequence Length = 152883 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 235 ctccaccgccgtctccgcct 254 |||||||||||||||||||| Sbjct: 21682 ctccaccgccgtctccgcct 21701
>gb|BT005020.1| Arabidopsis thaliana clone U20712 putative disease resistance protein (At2g19780) mRNA, complete cds Length = 1240 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 226 cgtcaccgtctccaccgccg 245 |||||||||||||||||||| Sbjct: 130 cgtcaccgtctccaccgccg 111
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 220 cgcccgcgtcaccgtctccaccgc 243 |||||| ||||||||||||||||| Sbjct: 2055111 cgcccgggtcaccgtctccaccgc 2055088
>gb|AE004476.1| Pseudomonas aeruginosa PAO1, section 37 of 529 of the complete genome Length = 11930 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 525 gcgtccccgccgcgctctac 544 |||||||||||||||||||| Sbjct: 3196 gcgtccccgccgcgctctac 3177
>gb|BT004135.1| Arabidopsis thaliana clone RAFL15-20-F01 (R20712) putative disease resistance protein (At2g19780) mRNA, complete cds Length = 1440 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 226 cgtcaccgtctccaccgccg 245 |||||||||||||||||||| Sbjct: 168 cgtcaccgtctccaccgccg 149
>gb|AC091532.13| Oryza sativa chromosome 3 BAC OSJNBa0078A17 genomic sequence, complete sequence Length = 147344 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 240 ccgccgtctccgcctgccgc 259 |||||||||||||||||||| Sbjct: 20359 ccgccgtctccgcctgccgc 20378
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 421 gctggacggcgtgctcgcgc 440 |||||||||||||||||||| Sbjct: 1279573 gctggacggcgtgctcgcgc 1279592
>dbj|AP005201.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0685B06 Length = 140293 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 tctccaccgccgtctccgcc 253 |||||||||||||||||||| Sbjct: 94205 tctccaccgccgtctccgcc 94186
>dbj|AK119530.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-C07, full insert sequence Length = 1673 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 150 cgtacccggcgcagggccac 169 |||||||||||||||||||| Sbjct: 148 cgtacccggcgcagggccac 167
>emb|X14172.1|OSPHY18 Rice phy 18 gene for phytochrome Length = 9979 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 74 ctcgcatcgcatcgcacgcacgca 97 ||||| |||||||||||||||||| Sbjct: 1781 ctcgcgtcgcatcgcacgcacgca 1758
>dbj|AK110892.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-173-A01, full insert sequence Length = 1521 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 155 ccggcgcagggccacatcaacccg 178 ||||||||||||||||| |||||| Sbjct: 95 ccggcgcagggccacatgaacccg 118
>dbj|AK105966.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-E07, full insert sequence Length = 1665 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 150 cgtacccggcgcagggccac 169 |||||||||||||||||||| Sbjct: 145 cgtacccggcgcagggccac 164
>dbj|AK105783.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-G07, full insert sequence Length = 1640 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 150 cgtacccggcgcagggccac 169 |||||||||||||||||||| Sbjct: 89 cgtacccggcgcagggccac 108
>dbj|AK101949.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033075D23, full insert sequence Length = 1575 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 329 ccctactccgacggctacga 348 |||||||||||||||||||| Sbjct: 964 ccctactccgacggctacga 983
>dbj|AK099276.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023105H10, full insert sequence Length = 2393 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 235 ctccaccgccgtctccgcct 254 |||||||||||||||||||| Sbjct: 534 ctccaccgccgtctccgcct 553
>dbj|AK070389.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023048I16, full insert sequence Length = 2466 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 235 ctccaccgccgtctccgcct 254 |||||||||||||||||||| Sbjct: 607 ctccaccgccgtctccgcct 626
>dbj|AK066301.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013059M20, full insert sequence Length = 1596 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 150 cgtacccggcgcagggccac 169 |||||||||||||||||||| Sbjct: 58 cgtacccggcgcagggccac 77
>dbj|AK060929.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-201-A09, full insert sequence Length = 1195 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 329 ccctactccgacggctacga 348 |||||||||||||||||||| Sbjct: 590 ccctactccgacggctacga 609
>dbj|AK060527.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-020-F02, full insert sequence Length = 1249 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 329 ccctactccgacggctacga 348 |||||||||||||||||||| Sbjct: 965 ccctactccgacggctacga 984
>gb|AF134588.1|AF134588 Streptomyces chrysomallus 4-methyl-3-hydroxyanthranilic acid acyl carrier protein (acmD) gene, complete cds Length = 237 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 265 gttcccggacgacgcggacg 284 |||||||||||||||||||| Sbjct: 66 gttcccggacgacgcggacg 85
>emb|AL606443.3|OSJN00008 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0026L04, complete sequence Length = 129563 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 150 cgtacccggcgcagggccac 169 |||||||||||||||||||| Sbjct: 126815 cgtacccggcgcagggccac 126796 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 150 cgtacccggcgcagggccac 169 |||||||||||||||||||| Sbjct: 75284 cgtacccggcgcagggccac 75303 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 150 cgtacccggcgcagggccac 169 |||||||||||||||||||| Sbjct: 62779 cgtacccggcgcagggccac 62798 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,933,891 Number of Sequences: 3902068 Number of extensions: 2933891 Number of successful extensions: 72468 Number of sequences better than 10.0: 152 Number of HSP's better than 10.0 without gapping: 171 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 66277 Number of HSP's gapped (non-prelim): 6184 length of query: 546 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 523 effective length of database: 17,143,297,704 effective search space: 8965944699192 effective search space used: 8965944699192 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
