>HAM1_ANASP (Q8YM52) HAM1 protein homolog|
          Length = 196

 Score = 32.7 bits (73), Expect = 0.83
 Identities = 13/24 (54%), Positives = 19/24 (79%)
 Frame = -3

Query: 91  GLHGE*VEGLPGVHGARHGRTDGQ 20
           GL  + + GLPGV+ AR+G+TDG+
Sbjct: 70  GLQVDALNGLPGVYSARYGKTDGE 93

>LEU3_CANRU (Q9HDQ5) 3-isopropylmalate dehydrogenase (EC 1.1.1.85) (Beta-IPM|
           dehydrogenase) (IMDH) (3-IPM-DH)
          Length = 359

 Score = 32.3 bits (72), Expect = 1.1
 Identities = 38/148 (25%), Positives = 59/148 (39%), Gaps = 26/148 (17%)
 Frame = +2

Query: 203 ASHLRGGAGDDGTCSKLP------APVADALV-------HYAASNVTPQQTAAEIGVSLR 343
           ++HL GGA  D T   LP      A  +DA++        +   +V P+Q   +I   L 
Sbjct: 40  STHLIGGAAIDATGVPLPDEALEAAKASDAVLLGAVGGPKWGTGDVRPEQGLLKIRKELG 99

Query: 344 VLQRRSPCSFLVFGLGLDSPMWAALNHGGRTVFL-------------EEDASWIASVRSK 484
           +     PCSF    L   SP+   +  G   V +             E+D S +AS    
Sbjct: 100 LYANLRPCSFASSKLVDLSPLKREIVEGTDFVVVRELVGGIYFGERKEDDGSGVAS---- 155

Query: 485 HPGLESYHVVYDTRVTEADDLMSLRDHP 568
               E+Y V    R+T     ++L+ +P
Sbjct: 156 --DTETYSVPEVERITRMAAFLALQHNP 181

>ATS17_HUMAN (Q8TE56) ADAMTS-17 precursor (EC 3.4.24.-) (A disintegrin and|
           metalloproteinase with thrombospondin motifs 17)
           (ADAM-TS 17) (ADAM-TS17)
          Length = 1095

 Score = 32.3 bits (72), Expect = 1.1
 Identities = 18/75 (24%), Positives = 28/75 (37%)
 Frame = +2

Query: 191 PGPAASHLRGGAGDDGTCSKLPAPVADALVHYAASNVTPQQTAAEIGVSLRVLQRRSPCS 370
           PGP  +H  G + +   C  LP P               + +  + G+   V+    PC 
Sbjct: 575 PGPGGTHCPGASVEHAVCENLPCPKGLPSFRDQQCQAHDRLSPKKKGLLTAVVVDDKPCE 634

Query: 371 FLVFGLGLDSPMWAA 415
                LG +SP+  A
Sbjct: 635 LYCSPLGKESPLLVA 649

>PP16A_HUMAN (Q96I34) Protein phosphatase 1 regulatory subunit 16A (Myosin|
           phosphatase-targeting subunit 3)
          Length = 528

 Score = 30.0 bits (66), Expect = 5.4
 Identities = 20/54 (37%), Positives = 24/54 (44%)
 Frame = -3

Query: 568 RVVPEGHEVVGLGDAGVVHDVVGLEPRVLGADGGDPRRVLLEEHRAAAVVERRP 407
           R  PEG E     + G+  D V  +P      GGDP  + L      A VERRP
Sbjct: 470 RPPPEGPESPETAEPGLPGDTVTPQPDCGFRAGGDPPLLKLTAPAVEAPVERRP 523

>PYRH_STRP8 (P65940) Uridylate kinase (EC 2.7.4.-) (UK) (Uridine monophosphate|
           kinase) (UMP kinase)
          Length = 242

 Score = 29.6 bits (65), Expect = 7.0
 Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 5/74 (6%)
 Frame = +2

Query: 263 VADALVHYAASN----VTPQQTAAEIGVSLRVLQRRSPCSFLVFGLGLDSPMWAALNHGG 430
           +AD+L HY          P Q  AE  +  R L+       +VFG G+ SP ++      
Sbjct: 87  MADSLQHYGVDTRVQTAIPMQNVAEPYIRGRALRHLEKNRIVVFGAGIGSPYFSTDTTAA 146

Query: 431 -RTVFLEEDASWIA 469
            R   +E DA  +A
Sbjct: 147 LRAAEIEADAILMA 160

>PYRH_STRP6 (Q5XDH4) Uridylate kinase (EC 2.7.4.-) (UK) (Uridine monophosphate|
           kinase) (UMP kinase)
          Length = 242

 Score = 29.6 bits (65), Expect = 7.0
 Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 5/74 (6%)
 Frame = +2

Query: 263 VADALVHYAASN----VTPQQTAAEIGVSLRVLQRRSPCSFLVFGLGLDSPMWAALNHGG 430
           +AD+L HY          P Q  AE  +  R L+       +VFG G+ SP ++      
Sbjct: 87  MADSLQHYGVDTRVQTAIPMQNVAEPYIRGRALRHLEKNRIVVFGAGIGSPYFSTDTTAA 146

Query: 431 -RTVFLEEDASWIA 469
            R   +E DA  +A
Sbjct: 147 LRAAEIEADAILMA 160

>PYRH_STRP3 (P65939) Uridylate kinase (EC 2.7.4.-) (UK) (Uridine monophosphate|
           kinase) (UMP kinase)
          Length = 242

 Score = 29.6 bits (65), Expect = 7.0
 Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 5/74 (6%)
 Frame = +2

Query: 263 VADALVHYAASN----VTPQQTAAEIGVSLRVLQRRSPCSFLVFGLGLDSPMWAALNHGG 430
           +AD+L HY          P Q  AE  +  R L+       +VFG G+ SP ++      
Sbjct: 87  MADSLQHYGVDTRVQTAIPMQNVAEPYIRGRALRHLEKNRIVVFGAGIGSPYFSTDTTAA 146

Query: 431 -RTVFLEEDASWIA 469
            R   +E DA  +A
Sbjct: 147 LRAAEIEADAILMA 160

>PYRH_STRP1 (P65938) Uridylate kinase (EC 2.7.4.-) (UK) (Uridine monophosphate|
           kinase) (UMP kinase)
          Length = 242

 Score = 29.6 bits (65), Expect = 7.0
 Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 5/74 (6%)
 Frame = +2

Query: 263 VADALVHYAASN----VTPQQTAAEIGVSLRVLQRRSPCSFLVFGLGLDSPMWAALNHGG 430
           +AD+L HY          P Q  AE  +  R L+       +VFG G+ SP ++      
Sbjct: 87  MADSLQHYGVDTRVQTAIPMQNVAEPYIRGRALRHLEKNRIVVFGAGIGSPYFSTDTTAA 146

Query: 431 -RTVFLEEDASWIA 469
            R   +E DA  +A
Sbjct: 147 LRAAEIEADAILMA 160

>PARB_TREPA (O83295) Probable chromosome partitioning protein parB|
          Length = 324

 Score = 29.3 bits (64), Expect = 9.2
 Identities = 17/64 (26%), Positives = 28/64 (43%)
 Frame = -3

Query: 580 RGAPRVVPEGHEVVGLGDAGVVHDVVGLEPRVLGADGGDPRRVLLEEHRAAAVVERRPHR 401
           +G   ++ E  +   + D+G V  V  L+P +L A+    RR   +E         R H 
Sbjct: 8   KGIDALLQESSDRYDVRDSGGVQTVHYLDPTLLQANPHQARRTFAQESLEELAASIREHG 67

Query: 400 AVQP 389
            +QP
Sbjct: 68  VIQP 71

>PAM17_EMENI (Q5BGF9) Presequence translocated-associated motor subunit pam17,|
           mitochondrial precursor
          Length = 243

 Score = 29.3 bits (64), Expect = 9.2
 Identities = 23/69 (33%), Positives = 33/69 (47%)
 Frame = -1

Query: 549 MRSSASVTRVSYTTW*DSSPGCLERTEAIHDASSSRNTVRPPWLSAAHIGLSSPSPNTRK 370
           MR +A  TRVS TT    +P  L+ T AI+   S +N  RP   S      +SP+  T  
Sbjct: 1   MRGAALCTRVSSTTL---NPVTLQ-TSAIYQTISLKNQTRPSSTSTVRFLKASPTLRTSS 56

Query: 369 LQGERRCRT 343
            + + +  T
Sbjct: 57  ARPQAQIAT 65

>NICA_DROME (Q9VC27) Nicastrin homolog precursor|
          Length = 695

 Score = 29.3 bits (64), Expect = 9.2
 Identities = 21/75 (28%), Positives = 31/75 (41%), Gaps = 16/75 (21%)
 Frame = +2

Query: 380 FGLGLDSPMWAALNHGGRTVFLEEDASWIASVRSKHPGLESYHVVYD------------- 520
           F L + S M A L       FL  D ++ A + +  P  + YH +YD             
Sbjct: 404 FNLNIQSEMSAHLPPTSAQSFLRRDPNFNALILNARPTNKYYHSIYDDADNVDFTYANTS 463

Query: 521 ---TRVTEADDLMSL 556
              T++TE +D  SL
Sbjct: 464 KDFTQLTEVNDFKSL 478

>G3BP_MOUSE (P97855) Ras-GTPase-activating protein-binding protein 1 (EC|
           3.6.1.-) (ATP-dependent DNA helicase VIII) (GAP
           SH3-domain-binding protein 1) (G3BP-1) (HDH-VIII)
          Length = 465

 Score = 29.3 bits (64), Expect = 9.2
 Identities = 18/40 (45%), Positives = 21/40 (52%), Gaps = 4/40 (10%)
 Frame = -3

Query: 448 LEEHRAAAVVERRPHRAVQPEPEH----QEAAGRAALQDA 341
           LEEH    VVE  P    +PEPE     QE    AAL++A
Sbjct: 182 LEEHLEEPVVEPEPEPEPEPEPEPVSDIQEDKPEAALEEA 221


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.315    0.137    0.412 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 58,229,716
Number of Sequences: 219361
Number of extensions: 1072284
Number of successful extensions: 3428
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 3281
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3423
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5310515667
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)