Clone Name | bart43h08 |
---|---|
Clone Library Name | barley_pub |
>ref|XM_467979.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1398 Score = 248 bits (125), Expect = 2e-62 Identities = 293/349 (83%) Strand = Plus / Plus Query: 196 tgaacgatgtgaagccgtacctggcgatggtgctgctgcaggtggggttcgccgggatgt 255 ||||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||| Sbjct: 43 tgaacgatgcgaagccgtacctggcgatgatactgctgcaggtggggttcgccgggatgt 102 Query: 256 acatcatcgccgtggcgtccctcaaggccgggatgagccacttcgtcctcgtcgtctacc 315 || | | ||||| || || |||||| ||| |||||||||||||||||||||||||||| Sbjct: 103 acgtggtggccgtcgcctcgctcaagcgcggcatgagccacttcgtcctcgtcgtctacc 162 Query: 316 gtaacctcgtcgccaccgccgtcatgacgcccttcgccatctacttcgagaggggactga 375 |||||||| ||||||||||||||||| ||||||||||| ||| ||||||||| || | | Sbjct: 163 gtaacctcttcgccaccgccgtcatggcgcccttcgccctctggttcgagaggcgagtaa 222 Query: 376 ggccaaagatgacaatcaccatcttcatcaagatcatggggcttgcatttctcgagcctg 435 | |||| | |||| ||| ||||||| | |||||||||||||| || | || ||||||| Sbjct: 223 gaccaaggttgaccctcatcatcttcctgaagatcatggggctcgccatacttgagcctg 282 Query: 436 tgattgaccagaacctgtacttcatgggcgcgaagatgacctcggcaggattcgcgacgg 495 || |||| ||||||||||||| |||||| || || |||| || || || ||||| | | Sbjct: 283 tgcttgatcagaacctgtactacatgggggccaacctgacatccgccggcttcgcctccg 342 Query: 496 cgctcgtcaacatcctcccggctgtcaccttcgtgctggccctcatcct 544 | ||| ||||| ||||||| || ||||||||||| |||||||| |||| Sbjct: 343 ctctcatcaacgtcctccccgccgtcaccttcgtcatggccctcgtcct 391
>dbj|AK073339.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033030K15, full insert sequence Length = 1398 Score = 248 bits (125), Expect = 2e-62 Identities = 293/349 (83%) Strand = Plus / Plus Query: 196 tgaacgatgtgaagccgtacctggcgatggtgctgctgcaggtggggttcgccgggatgt 255 ||||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||| Sbjct: 43 tgaacgatgcgaagccgtacctggcgatgatactgctgcaggtggggttcgccgggatgt 102 Query: 256 acatcatcgccgtggcgtccctcaaggccgggatgagccacttcgtcctcgtcgtctacc 315 || | | ||||| || || |||||| ||| |||||||||||||||||||||||||||| Sbjct: 103 acgtggtggccgtcgcctcgctcaagcgcggcatgagccacttcgtcctcgtcgtctacc 162 Query: 316 gtaacctcgtcgccaccgccgtcatgacgcccttcgccatctacttcgagaggggactga 375 |||||||| ||||||||||||||||| ||||||||||| ||| ||||||||| || | | Sbjct: 163 gtaacctcttcgccaccgccgtcatggcgcccttcgccctctggttcgagaggcgagtaa 222 Query: 376 ggccaaagatgacaatcaccatcttcatcaagatcatggggcttgcatttctcgagcctg 435 | |||| | |||| ||| ||||||| | |||||||||||||| || | || ||||||| Sbjct: 223 gaccaaggttgaccctcatcatcttcctgaagatcatggggctcgccatacttgagcctg 282 Query: 436 tgattgaccagaacctgtacttcatgggcgcgaagatgacctcggcaggattcgcgacgg 495 || |||| ||||||||||||| |||||| || || |||| || || || ||||| | | Sbjct: 283 tgcttgatcagaacctgtactacatgggggccaacctgacatccgccggcttcgcctccg 342 Query: 496 cgctcgtcaacatcctcccggctgtcaccttcgtgctggccctcatcct 544 | ||| ||||| ||||||| || ||||||||||| |||||||| |||| Sbjct: 343 ctctcatcaacgtcctccccgccgtcaccttcgtcatggccctcgtcct 391
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 200 bits (101), Expect = 3e-48 Identities = 155/173 (89%) Strand = Plus / Minus Query: 196 tgaacgatgtgaagccgtacctggcgatggtgctgctgcaggtggggttcgccgggatgt 255 ||||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||| Sbjct: 32380354 tgaacgatgcgaagccgtacctggcgatgatactgctgcaggtggggttcgccgggatgt 32380295 Query: 256 acatcatcgccgtggcgtccctcaaggccgggatgagccacttcgtcctcgtcgtctacc 315 || | | ||||| || || |||||| ||| |||||||||||||||||||||||||||| Sbjct: 32380294 acgtggtggccgtcgcctcgctcaagcgcggcatgagccacttcgtcctcgtcgtctacc 32380235 Query: 316 gtaacctcgtcgccaccgccgtcatgacgcccttcgccatctacttcgagagg 368 |||||||| ||||||||||||||||| ||||||||||| ||| ||||||||| Sbjct: 32380234 gtaacctcttcgccaccgccgtcatggcgcccttcgccctctggttcgagagg 32380182 Score = 52.0 bits (26), Expect = 0.002 Identities = 92/114 (80%) Strand = Plus / Minus Query: 431 gcctgtgattgaccagaacctgtacttcatgggcgcgaagatgacctcggcaggattcgc 490 ||||||| |||| ||||||||||||| |||||| || || |||| || || || ||||| Sbjct: 32379139 gcctgtgcttgatcagaacctgtactacatgggggccaacctgacatccgccggcttcgc 32379080 Query: 491 gacggcgctcgtcaacatcctcccggctgtcaccttcgtgctggccctcatcct 544 | || ||| ||||| ||||||| || ||||||||||| |||||||| |||| Sbjct: 32379079 ctccgctctcatcaacgtcctccccgccgtcaccttcgtcatggccctcgtcct 32379026
>dbj|AP004125.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1767_D02 Length = 139145 Score = 200 bits (101), Expect = 3e-48 Identities = 155/173 (89%) Strand = Plus / Minus Query: 196 tgaacgatgtgaagccgtacctggcgatggtgctgctgcaggtggggttcgccgggatgt 255 ||||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||| Sbjct: 41867 tgaacgatgcgaagccgtacctggcgatgatactgctgcaggtggggttcgccgggatgt 41808 Query: 256 acatcatcgccgtggcgtccctcaaggccgggatgagccacttcgtcctcgtcgtctacc 315 || | | ||||| || || |||||| ||| |||||||||||||||||||||||||||| Sbjct: 41807 acgtggtggccgtcgcctcgctcaagcgcggcatgagccacttcgtcctcgtcgtctacc 41748 Query: 316 gtaacctcgtcgccaccgccgtcatgacgcccttcgccatctacttcgagagg 368 |||||||| ||||||||||||||||| ||||||||||| ||| ||||||||| Sbjct: 41747 gtaacctcttcgccaccgccgtcatggcgcccttcgccctctggttcgagagg 41695 Score = 52.0 bits (26), Expect = 0.002 Identities = 92/114 (80%) Strand = Plus / Minus Query: 431 gcctgtgattgaccagaacctgtacttcatgggcgcgaagatgacctcggcaggattcgc 490 ||||||| |||| ||||||||||||| |||||| || || |||| || || || ||||| Sbjct: 40652 gcctgtgcttgatcagaacctgtactacatgggggccaacctgacatccgccggcttcgc 40593 Query: 491 gacggcgctcgtcaacatcctcccggctgtcaccttcgtgctggccctcatcct 544 | || ||| ||||| ||||||| || ||||||||||| |||||||| |||| Sbjct: 40592 ctccgctctcatcaacgtcctccccgccgtcaccttcgtcatggccctcgtcct 40539
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 174 bits (88), Expect = 2e-40 Identities = 133/148 (89%) Strand = Plus / Plus Query: 206 gaagccgtacctggcgatggtgctgctgcaggtggggttcgccgggatgtacatcatcgc 265 |||||||||| ||||||||||||||||||||||||||||||| |||||||||||| || | Sbjct: 5625012 gaagccgtacgtggcgatggtgctgctgcaggtggggttcgcggggatgtacatcgtctc 5625071 Query: 266 cgtggcgtccctcaaggccgggatgagccacttcgtcctcgtcgtctaccgtaacctcgt 325 ||||||||| || ||| ||| |||| |||||||||||||||||||||||| |||||||| Sbjct: 5625072 cgtggcgtcgctgaagcgcggcatgaaccacttcgtcctcgtcgtctaccgcaacctcgt 5625131 Query: 326 cgccaccgccgtcatgacgcccttcgcc 353 |||||||| | ||||| | ||||||||| Sbjct: 5625132 cgccaccgtcctcatggcccccttcgcc 5625159 Score = 97.6 bits (49), Expect = 4e-17 Identities = 85/97 (87%) Strand = Plus / Plus Query: 431 gcctgtgattgaccagaacctgtacttcatgggcgcgaagatgacctcggcaggattcgc 490 ||||||| |||| |||||||| |||| ||||||||||||| ||||||| || || ||||| Sbjct: 5626421 gcctgtgcttgatcagaacctatactacatgggcgcgaagctgacctccgccggcttcgc 5626480 Query: 491 gacggcgctcgtcaacatcctcccggctgtcaccttc 527 |||||||||||||||||||||| || ||||||||| Sbjct: 5626481 ctcggcgctcgtcaacatcctccccgccgtcaccttc 5626517 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 366 aggggactgaggccaaagatgacaatcaccatcttcatcaagatcatggggcttgc 421 |||||| ||||||| ||||||||| | | |||||| ||||||||||||||||||| Sbjct: 5626227 aggggagtgaggcccaagatgacactgagaatcttcctcaagatcatggggcttgc 5626282 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 290 gagccacttcgtcctcgtcgtcta 313 |||||||| ||||||||||||||| Sbjct: 3987016 gagccactgcgtcctcgtcgtcta 3986993 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 80 agctaagctagctagccaca 99 |||||||||||||||||||| Sbjct: 3296224 agctaagctagctagccaca 3296205
>dbj|AP004687.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0021C04 Length = 162115 Score = 174 bits (88), Expect = 2e-40 Identities = 133/148 (89%) Strand = Plus / Plus Query: 206 gaagccgtacctggcgatggtgctgctgcaggtggggttcgccgggatgtacatcatcgc 265 |||||||||| ||||||||||||||||||||||||||||||| |||||||||||| || | Sbjct: 17159 gaagccgtacgtggcgatggtgctgctgcaggtggggttcgcggggatgtacatcgtctc 17218 Query: 266 cgtggcgtccctcaaggccgggatgagccacttcgtcctcgtcgtctaccgtaacctcgt 325 ||||||||| || ||| ||| |||| |||||||||||||||||||||||| |||||||| Sbjct: 17219 cgtggcgtcgctgaagcgcggcatgaaccacttcgtcctcgtcgtctaccgcaacctcgt 17278 Query: 326 cgccaccgccgtcatgacgcccttcgcc 353 |||||||| | ||||| | ||||||||| Sbjct: 17279 cgccaccgtcctcatggcccccttcgcc 17306 Score = 97.6 bits (49), Expect = 4e-17 Identities = 85/97 (87%) Strand = Plus / Plus Query: 431 gcctgtgattgaccagaacctgtacttcatgggcgcgaagatgacctcggcaggattcgc 490 ||||||| |||| |||||||| |||| ||||||||||||| ||||||| || || ||||| Sbjct: 18568 gcctgtgcttgatcagaacctatactacatgggcgcgaagctgacctccgccggcttcgc 18627 Query: 491 gacggcgctcgtcaacatcctcccggctgtcaccttc 527 |||||||||||||||||||||| || ||||||||| Sbjct: 18628 ctcggcgctcgtcaacatcctccccgccgtcaccttc 18664 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 366 aggggactgaggccaaagatgacaatcaccatcttcatcaagatcatggggcttgc 421 |||||| ||||||| ||||||||| | | |||||| ||||||||||||||||||| Sbjct: 18374 aggggagtgaggcccaagatgacactgagaatcttcctcaagatcatggggcttgc 18429
>gb|AC164956.2| Mus musculus BAC clone RP24-250C7 from chromosome 12, complete sequence Length = 192647 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Minus Query: 99 aagaagtagaagaagacgcagcagaagaagca 130 |||||| ||||||||| ||||||||||||||| Sbjct: 129933 aagaagaagaagaagaagcagcagaagaagca 129902
>gb|AC144817.3| Mus musculus BAC clone RP24-265M7 from chromosome 10, complete sequence Length = 141466 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Minus Query: 99 aagaagtagaagaagacgcagcagaagaagca 130 |||||| ||||||||| ||||||||||||||| Sbjct: 36244 aagaagaagaagaagaagcagcagaagaagca 36213
>gb|AC069544.9| Homo sapiens chromosome 10 clone RP11-398C13, complete sequence Length = 214866 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Plus Query: 99 aagaagtagaagaagacgcagcagaagaagca 130 |||||| ||||||||| ||||||||||||||| Sbjct: 139216 aagaaggagaagaagaagcagcagaagaagca 139247 Score = 40.1 bits (20), Expect = 7.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 99 aagaagtagaagaagacgcagcagaagaagca 130 |||||| || |||||| ||||||||||||||| Sbjct: 139489 aagaagcagtagaagaagcagcagaagaagca 139520
>dbj|AK040835.1| Mus musculus adult male aorta and vein cDNA, RIKEN full-length enriched library, clone:A530029F12 product:unclassifiable, full insert sequence Length = 1750 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Minus Query: 99 aagaagtagaagaagacgcagcagaagaagca 130 |||||| ||||||||| ||||||||||||||| Sbjct: 84 aagaagaagaagaagaagcagcagaagaagca 53
>gb|AC159136.7| Mus musculus 10 BAC RP23-58L22 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 207997 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Minus Query: 99 aagaagtagaagaagacgcagcagaagaagca 130 |||||| ||||||||| ||||||||||||||| Sbjct: 8053 aagaagaagaagaagaagcagcagaagaagca 8022
>emb|CT485612.7| Mouse DNA sequence from clone RP24-441F13 on chromosome 12, complete sequence Length = 116475 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Minus Query: 99 aagaagtagaagaagacgcagcagaagaagca 130 |||||| ||||||||| ||||||||||||||| Sbjct: 20984 aagaagaagaagaagaagcagcagaagaagca 20953
>gb|AC170753.7| Mus musculus BAC RP24-547D11 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 234156 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Plus Query: 99 aagaagtagaagaagacgcagcagaagaagca 130 |||||| ||||||||| ||||||||||||||| Sbjct: 141891 aagaagaagaagaagaagcagcagaagaagca 141922
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 264 gccgtggcgtccctcaaggccgg 286 ||||||||||||||||||||||| Sbjct: 2865370 gccgtggcgtccctcaaggccgg 2865392
>ref|XM_967564.1| PREDICTED: Tribolium castaneum similar to CG4356-PA, isoform A (LOC661406), mRNA Length = 1794 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 98 caagaagtagaagaagacgcagcagaagaag 128 ||||||| |||||||||||||| |||||||| Sbjct: 1476 caagaagaagaagaagacgcaggagaagaag 1506
>gb|AC153150.5| Mus musculus BAC clone RP23-181B14 from chromosome 13, complete sequence Length = 212639 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 100 agaagtagaagaagacgcagcagaagaagca 130 ||||| ||||||||| ||||||||||||||| Sbjct: 57345 agaagaagaagaagaagcagcagaagaagca 57375 Score = 40.1 bits (20), Expect = 7.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 99 aagaagtagaagaagacgcagcagaagaagca 130 |||||| ||||||||| | ||||||||||||| Sbjct: 57773 aagaagaagaagaagaagaagcagaagaagca 57804 Score = 40.1 bits (20), Expect = 7.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 99 aagaagtagaagaagacgcagcagaagaagca 130 |||||| ||||||||| | ||||||||||||| Sbjct: 57608 aagaagaagaagaagaagaagcagaagaagca 57639
>gb|AC069144.9|AC069144 Arabidopsis thaliana chromosome 1 BAC F14C21 genomic sequence, complete sequence Length = 102135 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 99 aagaagtagaagaagacgcagcagaagaagc 129 |||||||||||||||| |||| ||||||||| Sbjct: 66880 aagaagtagaagaagaagcagaagaagaagc 66910
>gb|AC064840.2|AC064840 Arabidopsis thaliana chromosome I BAC T24C10 genomic sequence, complete sequence Length = 77923 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Minus Query: 99 aagaagtagaagaagacgcagcagaagaagc 129 |||||||||||||||| |||| ||||||||| Sbjct: 27690 aagaagtagaagaagaagcagaagaagaagc 27660
>emb|CR378180.1| Pinus pinaster SSR, clone PPC2E11 Length = 195 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 99 aagaagtagaagaagacgcagcagaagaag 128 |||||| |||||||||| |||||||||||| Sbjct: 100 aagaagaagaagaagacccagcagaagaag 129
>emb|AJ577265.1|QRO577265 Quercus robur partial mRNA for pheromone receptor-like protein (ORF1) Length = 783 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 99 aagaagtagaagaagacgcagcagaagaag 128 |||||| ||||||||| ||||||||||||| Sbjct: 112 aagaagaagaagaagaagcagcagaagaag 141
>ref|XM_635833.1| Dictyostelium discoideum hypothetical protein (DDB0218296), partial mRNA Length = 2700 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 100 agaagtagaagaagacgcagcagaagaag 128 ||||||||||||||| |||| |||||||| Sbjct: 1764 agaagtagaagaagaggcagaagaagaag 1736
>ref|NM_190957.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1197 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 288 atgagccacttcgtcctcgtcgtctaccg 316 |||||||||| ||| |||||||||||||| Sbjct: 121 atgagccactacgtgctcgtcgtctaccg 149
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 258 atcatcgccgtggcgtccctc 278 ||||||||||||||||||||| Sbjct: 5882618 atcatcgccgtggcgtccctc 5882638
>gb|AC096997.3| Takifugu rubripes clone 217A23, complete sequence Length = 74841 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 106 agaagaagacgcagcagaagaagca 130 ||||||||| ||||||||||||||| Sbjct: 55675 agaagaagaagcagcagaagaagca 55699 Score = 40.1 bits (20), Expect = 7.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 99 aagaagtagaagaagacgcagcagaagaagca 130 |||||| |||||||| ||||||||||||||| Sbjct: 55626 aagaagaagaagaagcagcagcagaagaagca 55657
>ref|XM_424871.1| PREDICTED: Gallus gallus similar to LOC129293 protein (LOC427288), mRNA Length = 3161 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 106 agaagaagacgcagcagaagaagca 130 ||||||||| ||||||||||||||| Sbjct: 1982 agaagaagaagcagcagaagaagca 2006
>emb|AL512601.18| Human DNA sequence from clone RP11-500B3 on chromosome 9 Contains the 5' end of a novel gene, complete sequence Length = 165517 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 106 agaagaagacgcagcagaagaagca 130 ||||||||| ||||||||||||||| Sbjct: 9423 agaagaagaagcagcagaagaagca 9399 Score = 40.1 bits (20), Expect = 7.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 99 aagaagtagaagaagacgcagcagaagaagca 130 |||||| || |||||| ||||||||||||||| Sbjct: 9418 aagaagcagcagaagaagcagcagaagaagca 9387 Score = 40.1 bits (20), Expect = 7.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 99 aagaagtagaagaagacgcagcagaagaagca 130 |||||| ||||| ||| ||||||||||||||| Sbjct: 9310 aagaagcagaagcagaagcagcagaagaagca 9279
>dbj|AB207102.1| Acidovorax avenae subsp. avenae Hrp gene cluster, complete cds, strain: N1141 Length = 66987 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 528 gtgctggccctcatcctgcgcatgg 552 |||||||||||| |||||||||||| Sbjct: 48938 gtgctggccctcgtcctgcgcatgg 48962
>emb|CR388835.1| Gallus gallus finished cDNA, clone ChEST33o17 Length = 858 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 106 agaagaagacgcagcagaagaagca 130 ||||||||| ||||||||||||||| Sbjct: 398 agaagaagaagcagcagaagaagca 422
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 288 atgagccacttcgtcctcgtcgtctaccg 316 |||||||||| ||| |||||||||||||| Sbjct: 34038412 atgagccactacgtgctcgtcgtctaccg 34038384 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 110 gaagacgcagcagaagaagc 129 |||||||||||||||||||| Sbjct: 3960753 gaagacgcagcagaagaagc 3960772
>gb|AC129884.4| Ornithorhynchus anatinus clone OA_Bb-5C22, complete sequence Length = 120929 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 139 ggaaaattttgaggtggggagagat 163 |||||||||||||| |||||||||| Sbjct: 88187 ggaaaattttgaggaggggagagat 88211
>dbj|AB174850.1| Pseudomonas putida sfnB, sfnA, sfnF, sfnG genes for acyl-CoA dehydrogenase-family protein, acyl-CoA dehydrogenase-family protein, NADH-dependent FMN reductase, FMNH2-dependent dimethyl sulfone monooxygenase, complete cds Length = 4966 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 227 gctgctgcaggtggggttcgc 247 ||||||||||||||||||||| Sbjct: 1384 gctgctgcaggtggggttcgc 1404
>dbj|AP003232.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0034E02 Length = 165497 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 288 atgagccacttcgtcctcgtcgtctaccg 316 |||||||||| ||| |||||||||||||| Sbjct: 34890 atgagccactacgtgctcgtcgtctaccg 34862
>emb|BX293555.7| Mouse DNA sequence from clone RP23-202M10 on chromosome 2, complete sequence Length = 192154 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 106 agaagaagacgcagcagaagaagca 130 ||||||||| ||||||||||||||| Sbjct: 96842 agaagaagaagcagcagaagaagca 96866
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 208 agccgtacctggcgatggtgc 228 ||||||||||||||||||||| Sbjct: 1059533 agccgtacctggcgatggtgc 1059513
>emb|AL772297.10| Mouse DNA sequence from clone RP23-462N15 on chromosome 4, complete sequence Length = 55367 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 99 aagaagtagaagaagacgcagcagaagaa 127 |||||| ||||||||| |||||||||||| Sbjct: 10777 aagaagaagaagaagaagcagcagaagaa 10805
>ref|NM_120787.2| Arabidopsis thaliana unknown protein AT5G07050 mRNA, complete cds Length = 1349 Score = 40.1 bits (20), Expect = 7.5 Identities = 38/44 (86%) Strand = Plus / Plus Query: 273 tccctcaaggccgggatgagccacttcgtcctcgtcgtctaccg 316 |||||||| |||| |||||||||| ||||| ||||||||||| Sbjct: 107 tccctcaacaccggtatgagccactatgtccttgtcgtctaccg 150
>gb|AC139128.6| Mus musculus chromosome 3, clone RP23-100B7, complete sequence Length = 239600 Score = 40.1 bits (20), Expect = 7.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 99 aagaagtagaagaagacgcagcagaagaagca 130 |||||| ||||||||| | ||||||||||||| Sbjct: 224260 aagaagaagaagaagaagaagcagaagaagca 224291
>ref|XM_550315.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3282 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 110 gaagacgcagcagaagaagc 129 |||||||||||||||||||| Sbjct: 3132 gaagacgcagcagaagaagc 3151
>ref|XM_474441.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1239 Score = 40.1 bits (20), Expect = 7.5 Identities = 35/40 (87%) Strand = Plus / Plus Query: 299 cgtcctcgtcgtctaccgtaacctcgtcgccaccgccgtc 338 ||||||||||| |||||| ||||| ||||| |||||||| Sbjct: 126 cgtcctcgtcgcctaccgctacctcttcgcctccgccgtc 165
>ref|XM_517262.1| PREDICTED: Pan troglodytes similar to Putative splicing factor YT521 (LOC461291), mRNA Length = 1812 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 99 aagaagtagaagaagacgcagcagaaga 126 |||||||||||||||| |||| |||||| Sbjct: 833 aagaagtagaagaagatgcagaagaaga 860
>gb|AC105080.8| Mus musculus chromosome 3, clone RP24-313N2, complete sequence Length = 195212 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 99 aagaagtagaagaagacgcagcag 122 |||||| ||||||||||||||||| Sbjct: 45519 aagaagaagaagaagacgcagcag 45496
>ref|NM_133370.2| Homo sapiens YTH domain containing 1 (YTHDC1), transcript variant 2, mRNA Length = 6195 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 99 aagaagtagaagaagacgcagcagaaga 126 |||||||||||||||| |||| |||||| Sbjct: 991 aagaagtagaagaagatgcagaagaaga 1018
>ref|NM_001031732.2| Homo sapiens YTH domain containing 1 (YTHDC1), transcript variant 1, mRNA Length = 6249 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 99 aagaagtagaagaagacgcagcagaaga 126 |||||||||||||||| |||| |||||| Sbjct: 991 aagaagtagaagaagatgcagaagaaga 1018
>gb|AC185978.2| Pan troglodytes BAC clone CH251-508B17 from chromosome 4, complete sequence Length = 198914 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 99 aagaagtagaagaagacgcagcagaaga 126 |||||||||||||||| |||| |||||| Sbjct: 3129 aagaagtagaagaagatgcagaagaaga 3102
>gb|AC137622.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0118N20, complete sequence Length = 146139 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 391 tcaccatcttcatcaagatc 410 |||||||||||||||||||| Sbjct: 133319 tcaccatcttcatcaagatc 133300
>ref|XM_457608.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0B15290g) partial mRNA Length = 3594 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 386 gacaatcaccatcttcatca 405 |||||||||||||||||||| Sbjct: 1087 gacaatcaccatcttcatca 1068
>gb|AC135430.2| Oryza sativa (japonica cultivar-group) chromosome 5 PAC clone P0671E09, complete sequence Length = 158472 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 391 tcaccatcttcatcaagatc 410 |||||||||||||||||||| Sbjct: 84749 tcaccatcttcatcaagatc 84730
>gb|AC159638.2| Mus musculus BAC clone RP24-78C16 from chromosome 12, complete sequence Length = 190196 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 130 acaaaacttggaaaattttg 149 |||||||||||||||||||| Sbjct: 138032 acaaaacttggaaaattttg 138051
>gb|AC133211.3| Mus musculus BAC clone RP23-36M18 from chromosome 12, complete sequence Length = 238126 Score = 40.1 bits (20), Expect = 7.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 99 aagaagtagaagaagacgcagcagaagaagca 130 |||||| ||||||||||| || |||||||||| Sbjct: 111395 aagaagaagaagaagacgaagaagaagaagca 111426
>gb|AC132144.3| Mus musculus BAC clone RP23-39L19 from chromosome 2, complete sequence Length = 233042 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 99 aagaagtagaagaagacgcagcag 122 |||||| ||||||||||||||||| Sbjct: 3495 aagaagaagaagaagacgcagcag 3518
>gb|AC112998.15| Mus musculus chromosome 3, clone RP23-147E7, complete sequence Length = 203273 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 177 ggcatggggtggaaagttgt 196 |||||||||||||||||||| Sbjct: 55567 ggcatggggtggaaagttgt 55586
>ref|XM_810794.1| Trypanosoma cruzi strain CL Brener dispersed gene family protein 1 (DGF-1) (Tc00.1047053507521.150) partial mRNA Length = 10446 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 211 cgtacctggcgatggtgctgctgc 234 ||||| |||||||||||||||||| Sbjct: 10100 cgtacgtggcgatggtgctgctgc 10123
>ref|XM_814972.1| Trypanosoma cruzi strain CL Brener dispersed gene family protein 1 (DGF-1) (Tc00.1047053509287.140) partial mRNA Length = 10401 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 211 cgtacctggcgatggtgctgctgc 234 ||||| |||||||||||||||||| Sbjct: 10055 cgtacatggcgatggtgctgctgc 10078
>gb|AC073341.10| Homo sapiens BAC clone RP11-549I23 from 7, complete sequence Length = 185574 Score = 40.1 bits (20), Expect = 7.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 99 aagaagtagaagaagacgcagcagaagaagca 130 |||||| ||||||||| | ||||||||||||| Sbjct: 124748 aagaagaagaagaagaagaagcagaagaagca 124779
>gb|AC123675.7| Mus musculus chromosome 15, clone RP23-271I6, complete sequence Length = 233422 Score = 40.1 bits (20), Expect = 7.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 99 aagaagtagaagaagacgcagcagaagaagca 130 |||||| ||||||||| | ||||||||||||| Sbjct: 144446 aagaagaagaagaagaagaagcagaagaagca 144415
>gb|BC053863.1| Homo sapiens YTH domain containing 1, mRNA (cDNA clone MGC:61557 IMAGE:4933750), complete cds Length = 2939 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 99 aagaagtagaagaagacgcagcagaaga 126 |||||||||||||||| |||| |||||| Sbjct: 656 aagaagtagaagaagatgcagaagaaga 683
>gb|BC041119.1| Homo sapiens YTH domain containing 1, transcript variant 1, mRNA (cDNA clone MGC:47781 IMAGE:5541053), complete cds Length = 3279 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 99 aagaagtagaagaagacgcagcagaaga 126 |||||||||||||||| |||| |||||| Sbjct: 921 aagaagtagaagaagatgcagaagaaga 948
>ref|XM_499859.1| Yarrowia lipolytica CLIB122, YALI0A08019g predicted mRNA Length = 1410 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 106 agaagaagacgcagcagaagaagc 129 |||||||| ||||||||||||||| Sbjct: 1140 agaagaagccgcagcagaagaagc 1117
>emb|BX008976.1|CNS08F38 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA14CF05 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 790 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 108 aagaagacgcagcagaagaagcacaaaa 135 ||||||| ||||||||||||| |||||| Sbjct: 644 aagaagaagcagcagaagaagaacaaaa 617
>emb|CR382134.1| Debaryomyces hansenii chromosome B of strain CBS767 of Debaryomyces hansenii Length = 1349926 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 386 gacaatcaccatcttcatca 405 |||||||||||||||||||| Sbjct: 1197936 gacaatcaccatcttcatca 1197917
>emb|CR378664.1| Photobacterium profundum SS9; segment 2/12 Length = 347994 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 389 aatcaccatcttcatcaaga 408 |||||||||||||||||||| Sbjct: 227149 aatcaccatcttcatcaaga 227168
>gb|AC164177.6| Mus musculus 10 BAC RP23-102O12 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 196230 Score = 40.1 bits (20), Expect = 7.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 99 aagaagtagaagaagacgcagcagaagaagca 130 |||||| ||||||||| | ||||||||||||| Sbjct: 15007 aagaagaagaagaagaagaagcagaagaagca 15038
>emb|AL606686.3|OSJN00084 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0070M12, complete sequence Length = 144670 Score = 40.1 bits (20), Expect = 7.5 Identities = 35/40 (87%) Strand = Plus / Plus Query: 299 cgtcctcgtcgtctaccgtaacctcgtcgccaccgccgtc 338 ||||||||||| |||||| ||||| ||||| |||||||| Sbjct: 139607 cgtcctcgtcgcctaccgctacctcttcgcctccgccgtc 139646
>emb|AJ245900.1|OSA245900 Oryza sativa chromosome 4 BAC q3037-207F1 complete genome Length = 124321 Score = 40.1 bits (20), Expect = 7.5 Identities = 35/40 (87%) Strand = Plus / Minus Query: 299 cgtcctcgtcgtctaccgtaacctcgtcgccaccgccgtc 338 ||||||||||| |||||| ||||| ||||| |||||||| Sbjct: 109936 cgtcctcgtcgcctaccgctacctcttcgcctccgccgtc 109897
>gb|AC159330.9| Mus musculus 10 BAC RP23-91L18 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 224664 Score = 40.1 bits (20), Expect = 7.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 99 aagaagtagaagaagacgcagcagaagaagca 130 |||||| |||||||| ||||||||||||||| Sbjct: 110358 aagaagcagaagaagcagcagcagaagaagca 110389 Score = 40.1 bits (20), Expect = 7.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 99 aagaagtagaagaagacgcagcagaagaagca 130 |||||| ||||||||| | ||||||||||||| Sbjct: 110334 aagaagaagaagaagaagaagcagaagaagca 110365
>gb|AC127343.3| Mus musculus BAC clone RP23-194I18 from chromosome 10, complete sequence Length = 198624 Score = 40.1 bits (20), Expect = 7.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 99 aagaagtagaagaagacgcagcagaagaagca 130 |||||| |||||||| ||||||||||||||| Sbjct: 23421 aagaagcagaagaagcagcagcagaagaagca 23452 Score = 40.1 bits (20), Expect = 7.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 99 aagaagtagaagaagacgcagcagaagaagca 130 |||||| ||||||||| | ||||||||||||| Sbjct: 23397 aagaagaagaagaagaagaagcagaagaagca 23428
>emb|CR859148.1| Pongo pygmaeus mRNA; cDNA DKFZp459L1228 (from clone DKFZp459L1228) Length = 4351 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 99 aagaagtagaagaagacgcagcagaaga 126 |||||||||||||||| |||| |||||| Sbjct: 689 aagaagtagaagaagatgcagaagaaga 716
>dbj|AK056430.1| Homo sapiens cDNA FLJ31868 fis, clone NT2RP7001962, highly similar to Rattus norvegicus YT521 mRNA for RNA splicing-related protein Length = 3248 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 99 aagaagtagaagaagacgcagcagaaga 126 |||||||||||||||| |||| |||||| Sbjct: 976 aagaagtagaagaagatgcagaagaaga 1003
>dbj|AK138506.1| Mus musculus adult male spinal cord cDNA, RIKEN full-length enriched library, clone:A330044M04 product:unclassifiable, full insert sequence Length = 4233 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 223 tggtgctgctgcaggtgggg 242 |||||||||||||||||||| Sbjct: 2751 tggtgctgctgcaggtgggg 2770
>gb|AC154351.2| Mus musculus BAC clone RP24-536C5 from chromosome 17, complete sequence Length = 188013 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 170 gaccatgggcatggggtgga 189 |||||||||||||||||||| Sbjct: 139475 gaccatgggcatggggtgga 139456
>gb|AC156642.2| Mus musculus BAC clone RP23-254J5 from chromosome 9, complete sequence Length = 193872 Score = 40.1 bits (20), Expect = 7.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 99 aagaagtagaagaagacgcagcagaagaagca 130 |||||||||||||||| | || |||||||||| Sbjct: 105494 aagaagtagaagaagaagaagtagaagaagca 105525
>gb|AC153969.12| Mus musculus 10 BAC RP24-86H7 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 209599 Score = 40.1 bits (20), Expect = 7.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 99 aagaagtagaagaagacgcagcagaagaagca 130 |||||| ||||||||| | ||||||||||||| Sbjct: 162532 aagaagaagaagaagaagaagcagaagaagca 162563
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 7.5 Identities = 35/40 (87%) Strand = Plus / Plus Query: 299 cgtcctcgtcgtctaccgtaacctcgtcgccaccgccgtc 338 ||||||||||| |||||| ||||| ||||| |||||||| Sbjct: 35203095 cgtcctcgtcgcctaccgctacctcttcgcctccgccgtc 35203134
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 391 tcaccatcttcatcaagatc 410 |||||||||||||||||||| Sbjct: 17165594 tcaccatcttcatcaagatc 17165575
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 391 tcaccatcttcatcaagatc 410 |||||||||||||||||||| Sbjct: 13867247 tcaccatcttcatcaagatc 13867228
>gb|AC074378.4| Homo sapiens BAC clone RP11-4I17 from 4, complete sequence Length = 154112 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 99 aagaagtagaagaagacgcagcagaaga 126 |||||||||||||||| |||| |||||| Sbjct: 32912 aagaagtagaagaagatgcagaagaaga 32885
>emb|BX832761.1|CNS0A0Y9 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH9ZB10 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1348 Score = 40.1 bits (20), Expect = 7.5 Identities = 38/44 (86%) Strand = Plus / Plus Query: 273 tccctcaaggccgggatgagccacttcgtcctcgtcgtctaccg 316 |||||||| |||| |||||||||| ||||| ||||||||||| Sbjct: 107 tccctcaacaccggtatgagccactatgtccttgtcgtctaccg 150
>emb|BX831593.1|CNS0A0XA Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH17ZE03 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1329 Score = 40.1 bits (20), Expect = 7.5 Identities = 38/44 (86%) Strand = Plus / Plus Query: 273 tccctcaaggccgggatgagccacttcgtcctcgtcgtctaccg 316 |||||||| |||| |||||||||| ||||| ||||||||||| Sbjct: 92 tccctcaacaccggtatgagccactatgtccttgtcgtctaccg 135
>gb|AC020602.6| Homo sapiens BAC clone RP11-461M18 from 2, complete sequence Length = 167227 Score = 40.1 bits (20), Expect = 7.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 99 aagaagtagaagaagacgcagcagaagaagca 130 |||||| ||||||||| | ||||||||||||| Sbjct: 117752 aagaagaagaagaagaagaagcagaagaagca 117721
>gb|AC084552.1|CBRG33J07 Caenorhabditis briggsae cosmid G33J07, complete sequence Length = 37298 Score = 40.1 bits (20), Expect = 7.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 97 acaagaagtagaagaagacgcagcagaagaag 128 |||||||||||||||||| | || |||||||| Sbjct: 20212 acaagaagtagaagaagaagaagaagaagaag 20181
>dbj|AP002523.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0013F10 Length = 163095 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 110 gaagacgcagcagaagaagc 129 |||||||||||||||||||| Sbjct: 82657 gaagacgcagcagaagaagc 82676
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 230 gctgcaggtggggttcgccg 249 |||||||||||||||||||| Sbjct: 3252044 gctgcaggtggggttcgccg 3252025
>dbj|AP007257.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBb0019L07 Length = 131650 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 290 gagccacttcgtcctcgtcgtcta 313 |||||||| ||||||||||||||| Sbjct: 30671 gagccactgcgtcctcgtcgtcta 30648
>dbj|AP003019.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0035I03 Length = 153749 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 290 gagccacttcgtcctcgtcgtcta 313 |||||||| ||||||||||||||| Sbjct: 92892 gagccactgcgtcctcgtcgtcta 92869
>dbj|AP002536.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0015I14 Length = 150650 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 80 agctaagctagctagccaca 99 |||||||||||||||||||| Sbjct: 83587 agctaagctagctagccaca 83568
>emb|AL807237.17| Mouse DNA sequence from clone RP23-384O9 on chromosome X, complete sequence Length = 162709 Score = 40.1 bits (20), Expect = 7.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 99 aagaagtagaagaagacgcagcagaagaagca 130 |||||| ||||||||| | ||||||||||||| Sbjct: 159025 aagaagaagaagaagaagaagcagaagaagca 159056
>dbj|AB010697.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MOJ9 Length = 86380 Score = 40.1 bits (20), Expect = 7.5 Identities = 38/44 (86%) Strand = Plus / Minus Query: 273 tccctcaaggccgggatgagccacttcgtcctcgtcgtctaccg 316 |||||||| |||| |||||||||| ||||| ||||||||||| Sbjct: 72278 tccctcaacaccggtatgagccactatgtccttgtcgtctaccg 72235
>dbj|AP005389.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0091C18 Length = 154416 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 391 tcaccatcttcatcaagatc 410 |||||||||||||||||||| Sbjct: 89449 tcaccatcttcatcaagatc 89430
>dbj|AP005298.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1770_H03 Length = 189893 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 391 tcaccatcttcatcaagatc 410 |||||||||||||||||||| Sbjct: 26219 tcaccatcttcatcaagatc 26200
>dbj|AK098515.1| Homo sapiens cDNA FLJ25649 fis, clone SYN01041, highly similar to Rattus norvegicus YT521 mRNA for RNA splicing-related protein Length = 2598 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 99 aagaagtagaagaagacgcagcagaaga 126 |||||||||||||||| |||| |||||| Sbjct: 331 aagaagtagaagaagatgcagaagaaga 358
>dbj|AK107360.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-127-A04, full insert sequence Length = 1551 Score = 40.1 bits (20), Expect = 7.5 Identities = 35/40 (87%) Strand = Plus / Plus Query: 299 cgtcctcgtcgtctaccgtaacctcgtcgccaccgccgtc 338 ||||||||||| |||||| ||||| ||||| |||||||| Sbjct: 133 cgtcctcgtcgcctaccgctacctcttcgcctccgccgtc 172
>emb|AM055943.1| Toxoplasma gondii, strain RH, genomic DNA chromosome Ib Length = 2013089 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 101 gaagtagaagaagacgcagcagaagaag 128 |||| ||||||||||| ||||||||||| Sbjct: 1896681 gaagaagaagaagacgaagcagaagaag 1896654
>emb|AL442112.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0423H10, complete sequence Length = 76529 Score = 40.1 bits (20), Expect = 7.5 Identities = 32/36 (88%) Strand = Plus / Plus Query: 93 agccacaagaagtagaagaagacgcagcagaagaag 128 |||||||||||| ||||||||| | || |||||||| Sbjct: 38211 agccacaagaagaagaagaagaagaagaagaagaag 38246
>emb|AL732348.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0701F11, complete sequence Length = 82895 Score = 40.1 bits (20), Expect = 7.5 Identities = 35/40 (87%) Strand = Plus / Plus Query: 299 cgtcctcgtcgtctaccgtaacctcgtcgccaccgccgtc 338 ||||||||||| |||||| ||||| ||||| |||||||| Sbjct: 47110 cgtcctcgtcgcctaccgctacctcttcgcctccgccgtc 47149
>dbj|AP000871.7| Homo sapiens genomic DNA, chromosome 11 clone:RP11-709J7, complete sequence Length = 199118 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 142 aaattttgaggtggggagag 161 |||||||||||||||||||| Sbjct: 113115 aaattttgaggtggggagag 113096
>gb|DQ322694.1| Glycine max WRKY65 mRNA, complete cds Length = 975 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 105 tagaagaagacgcagcagaagaag 128 |||||||||||| ||||||||||| Sbjct: 148 tagaagaagacgaagcagaagaag 125
>emb|AL954194.8| Mouse DNA sequence from clone RP24-558L14 on chromosome 4, complete sequence Length = 34431 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 223 tggtgctgctgcaggtgggg 242 |||||||||||||||||||| Sbjct: 24157 tggtgctgctgcaggtgggg 24176
>emb|CT030001.16| Mouse DNA sequence from clone RP23-225D15 on chromosome 17, complete sequence Length = 180961 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 170 gaccatgggcatggggtgga 189 |||||||||||||||||||| Sbjct: 78839 gaccatgggcatggggtgga 78858
>emb|CR382127.1| Yarrowia lipolytica chromosome A of strain CLIB122 of Yarrowia lipolytica Length = 2303261 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 106 agaagaagacgcagcagaagaagc 129 |||||||| ||||||||||||||| Sbjct: 774372 agaagaagccgcagcagaagaagc 774349
>emb|AL928810.7| Mouse DNA sequence from clone RP23-71I16 on chromosome 2, complete sequence Length = 87843 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 99 aagaagtagaagaagacgcagcag 122 |||||| ||||||||||||||||| Sbjct: 64546 aagaagaagaagaagacgcagcag 64523
>emb|AL772381.5| Mouse DNA sequence from clone RP23-358I3 on chromosome 4, complete sequence Length = 199350 Score = 40.1 bits (20), Expect = 7.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 99 aagaagtagaagaagacgcagcagaagaagca 130 |||||| ||||||||| | ||||||||||||| Sbjct: 77197 aagaagaagaagaagaagaagcagaagaagca 77166
>gb|AY266091.1| Plasmodium vivax isolate INDO-94 merozoite surface protein-3a gene, complete cds Length = 2421 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 111 aagacgcagcagaagaagcacaaa 134 |||| ||||||||||||||||||| Sbjct: 953 aagaagcagcagaagaagcacaaa 976
>emb|AL832559.1|HSM803868 Homo sapiens mRNA; cDNA DKFZp547E1518 (from clone DKFZp547E1518) Length = 2797 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 99 aagaagtagaagaagacgcagcagaaga 126 |||||||||||||||| |||| |||||| Sbjct: 510 aagaagtagaagaagatgcagaagaaga 537 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,328,554 Number of Sequences: 3902068 Number of extensions: 4328554 Number of successful extensions: 98766 Number of sequences better than 10.0: 103 Number of HSP's better than 10.0 without gapping: 105 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 97835 Number of HSP's gapped (non-prelim): 923 length of query: 554 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 531 effective length of database: 17,143,297,704 effective search space: 9103091080824 effective search space used: 9103091080824 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)