Clone Name | bart43g12 |
---|---|
Clone Library Name | barley_pub |
>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome Length = 3147090 Score = 44.1 bits (22), Expect = 0.25 Identities = 28/30 (93%) Strand = Plus / Minus Query: 168 ccaacagcaccgcctgggtgccgatgaacc 197 |||||||||||||| ||||||||| ||||| Sbjct: 2411624 ccaacagcaccgccagggtgccgaggaacc 2411595
>ref|XM_657547.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN5035.2), mRNA Length = 1443 Score = 42.1 bits (21), Expect = 1.00 Identities = 21/21 (100%) Strand = Plus / Plus Query: 198 gaccacacggcccatgctcat 218 ||||||||||||||||||||| Sbjct: 394 gaccacacggcccatgctcat 414
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 172 cagcaccgcctgggtgccga 191 |||||||||||||||||||| Sbjct: 1311876 cagcaccgcctgggtgccga 1311895
>gb|CP000097.1| Synechococcus sp. CC9902, complete genome Length = 2234828 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 ggcatcgatgtcgatgacat 267 |||||||||||||||||||| Sbjct: 2095407 ggcatcgatgtcgatgacat 2095388
>gb|AC147921.2| Xenopus tropicalis clone CH216-95N3, complete sequence Length = 133860 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 cctgctgcctgagtgcaaat 58 |||||||||||||||||||| Sbjct: 56955 cctgctgcctgagtgcaaat 56974
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence Length = 3806533 Score = 40.1 bits (20), Expect = 3.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 210 catgctcatcaacgtcgtcgagggcatc 237 |||||||| ||||||| ||||||||||| Sbjct: 1857855 catgctcagcaacgtcttcgagggcatc 1857828
>gb|AC138582.22| Pan troglodytes clone rp43-21p1, complete sequence Length = 119613 Score = 40.1 bits (20), Expect = 3.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 59 gcaggtgctagagatcaccatgaactcc 86 ||||| ||||||||||||| |||||||| Sbjct: 75924 gcaggagctagagatcaccctgaactcc 75897
>gb|AC104187.2| Homo sapiens chromosome 3 clone RP11-424N24, complete sequence Length = 186052 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 110 agctccctcaagcacatcccagaa 133 |||||||||||| ||||||||||| Sbjct: 156309 agctccctcaaggacatcccagaa 156286
>gb|AC000029.17| Homo sapiens Chromosome 22q11.2 BAC Clone 865e9 In GNAZ-BCR Region, complete sequence Length = 142979 Score = 40.1 bits (20), Expect = 3.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 59 gcaggtgctagagatcaccatgaactcc 86 ||||| ||||||||||||| |||||||| Sbjct: 123833 gcaggagctagagatcaccctgaactcc 123806
>gb|AC154307.2| Mus musculus BAC clone RP23-377C12 from chromosome 9, complete sequence Length = 186985 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 14 ctgcttctgatcatcttgtc 33 |||||||||||||||||||| Sbjct: 91321 ctgcttctgatcatcttgtc 91340
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 216 catcaacgtcgtcgagggca 235 |||||||||||||||||||| Sbjct: 7981555 catcaacgtcgtcgagggca 7981574 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,147,646 Number of Sequences: 3902068 Number of extensions: 2147646 Number of successful extensions: 39356 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 11 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 39221 Number of HSP's gapped (non-prelim): 135 length of query: 300 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 278 effective length of database: 17,147,199,772 effective search space: 4766921536616 effective search space used: 4766921536616 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)