ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart43g11
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|XM_479036.1| Oryza sativa (japonica cultivar-group), mRNA 60 6e-06
2ref|XM_506447.1| PREDICTED Oryza sativa (japonica cultivar-group... 60 6e-06
3ref|XM_479031.1| Oryza sativa (japonica cultivar-group), mRNA 60 6e-06
4dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 60 6e-06
5dbj|AP003840.2| Oryza sativa (japonica cultivar-group) genomic D... 60 6e-06
6dbj|AK106010.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 6e-06
7dbj|AK068696.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 6e-06
8dbj|AK062673.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 6e-06
9gb|AY112347.1| Zea mays CL32321_1 mRNA sequence 60 6e-06
10ref|XM_479032.1| Oryza sativa (japonica cultivar-group), mRNA 56 1e-04
11ref|XM_507388.1| PREDICTED Oryza sativa (japonica cultivar-group... 56 1e-04
12ref|XM_506448.1| PREDICTED Oryza sativa (japonica cultivar-group... 56 1e-04
13dbj|AK106214.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 1e-04
14dbj|AK105918.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 1e-04
15dbj|AK070771.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 1e-04
16gb|AC144762.3| Mus musculus BAC clone RP24-95D6 from 3, complete... 42 1.4
17gb|BC109470.1| Danio rerio cDNA clone IMAGE:7395403, containing ... 40 5.7
18gb|BC083410.1| Danio rerio zgc:103514, mRNA (cDNA clone MGC:1035... 40 5.7
19emb|AJ621385.1| Gallus gallus RAD50 gene (partial), IL5 gene, IR... 40 5.7
20gb|AC010142.4|AC010142 Homo sapiens BAC clone RP11-240N18 from Y... 40 5.7
21ref|NM_001006014.1| Danio rerio zgc:103514 (zgc:103514), mRNA 40 5.7
22gb|AC124409.5| Mus musculus BAC clone RP24-262P14 from 8, comple... 40 5.7
23gb|AC159985.2| Gallus gallus BAC clone CH261-18F10 from chromoso... 40 5.7
24emb|AL713991.13| Mouse DNA sequence from clone RP23-132C16 on ch... 40 5.7

>ref|XM_479036.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 678

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 57/66 (86%)
 Strand = Plus / Plus

                                                                       
Query: 42  tcttcctcgtggctctgctgctctcatgcagctccatgagcagtgcagcacgacacctag 101
           |||||||| |||| |||||||||||||| |||||||| ||||| ||||| ||  |||| |
Sbjct: 104 tcttcctcatggcgctgctgctctcatggagctccatcagcagcgcagctcgctacctgg 163

                 
Query: 102 aggagg 107
           ||||||
Sbjct: 164 aggagg 169



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 52/60 (86%)
 Strand = Plus / Plus

                                                                       
Query: 145 cccggagctgccaaagcccgaactcccgccgcaccccgtcatgcccgagctgccaaagcc 204
           ||||||||| || |||||||| || |||||||||| || | |||| ||||||||||||||
Sbjct: 192 cccggagcttccgaagcccgagctgccgccgcacctcgccgtgccggagctgccaaagcc 251



 Score = 40.1 bits (20), Expect = 5.7
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 323 caccctgctatgcccgagctcccgaagcctga 354
           ||||||||  |||| |||||||||||||||||
Sbjct: 349 caccctgcggtgccggagctcccgaagcctga 380



 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 146 ccggagctgccaaagcccga 165
           ||||||||||||||||||||
Sbjct: 235 ccggagctgccaaagcccga 254



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>ref|XM_506447.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1634_B10.112
           mRNA
          Length = 1006

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 51/58 (87%)
 Strand = Plus / Plus

                                                                     
Query: 146 ccggagctgccaaagcccgaactcccgccgcaccccgtcatgcccgagctgccaaagc 203
           |||||||| || ||||| || || ||||||||||||||| |||| |||||||||||||
Sbjct: 186 ccggagcttcccaagcctgagctgccgccgcaccccgtcgtgccggagctgccaaagc 243



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 51/59 (86%)
 Strand = Plus / Plus

                                                                      
Query: 146 ccggagctgccaaagcccgaactcccgccgcaccccgtcatgcccgagctgccaaagcc 204
           ||||||||||| |||| ||||   || |||||||||||| |||| ||||||||||||||
Sbjct: 324 ccggagctgcccaagcacgaagagccaccgcaccccgtcgtgccggagctgccaaagcc 382



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 54/63 (85%)
 Strand = Plus / Plus

                                                                       
Query: 42  tcttcctcgtggctctgctgctctcatgcagctccatgagcagtgcagcacgacacctag 101
           ||||||||||||| ||||||||||| |||||| ||||| |||  || ||||||| ||| |
Sbjct: 94  tcttcctcgtggcgctgctgctctcgtgcagcaccatgggcaacgctgcacgacgcctgg 153

              
Query: 102 agg 104
           |||
Sbjct: 154 agg 156



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 141 tcgtcccggagctgccaaagcccga 165
           |||| ||||||||||||||||||||
Sbjct: 361 tcgtgccggagctgccaaagcccga 385



 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 275 gtgccacaccccgtggtgccggag 298
           ||||||||||| ||||||||||||
Sbjct: 591 gtgccacaccctgtggtgccggag 614



 Score = 40.1 bits (20), Expect = 5.7
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 176 caccccgtcatgcccgagctgccaaagcctga 207
           ||||||||| |||| ||| |||||||||||||
Sbjct: 558 caccccgtcgtgccggagttgccaaagcctga 589



 Score = 40.1 bits (20), Expect = 5.7
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 173 ccgcaccccgtcatgcccgagctgccaaagcc 204
           |||||||||||| |||| |||||||| |||||
Sbjct: 474 ccgcaccccgtcgtgccggagctgccgaagcc 505



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>ref|XM_479031.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1005

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 51/58 (87%)
 Strand = Plus / Plus

                                                                     
Query: 146 ccggagctgccaaagcccgaactcccgccgcaccccgtcatgcccgagctgccaaagc 203
           |||||||| || ||||| || || ||||||||||||||| |||| |||||||||||||
Sbjct: 183 ccggagcttcccaagcctgagctgccgccgcaccccgtcgtgccggagctgccaaagc 240



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 51/59 (86%)
 Strand = Plus / Plus

                                                                      
Query: 146 ccggagctgccaaagcccgaactcccgccgcaccccgtcatgcccgagctgccaaagcc 204
           ||||||||||| |||| ||||   || |||||||||||| |||| ||||||||||||||
Sbjct: 321 ccggagctgcccaagcacgaagagccaccgcaccccgtcgtgccggagctgccaaagcc 379



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 54/63 (85%)
 Strand = Plus / Plus

                                                                       
Query: 42  tcttcctcgtggctctgctgctctcatgcagctccatgagcagtgcagcacgacacctag 101
           ||||||||||||| ||||||||||| |||||| ||||| |||  || ||||||| ||| |
Sbjct: 91  tcttcctcgtggcgctgctgctctcgtgcagcaccatgggcaacgctgcacgacgcctgg 150

              
Query: 102 agg 104
           |||
Sbjct: 151 agg 153



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 141 tcgtcccggagctgccaaagcccga 165
           |||| ||||||||||||||||||||
Sbjct: 358 tcgtgccggagctgccaaagcccga 382



 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 275 gtgccacaccccgtggtgccggag 298
           ||||||||||| ||||||||||||
Sbjct: 588 gtgccacaccctgtggtgccggag 611



 Score = 40.1 bits (20), Expect = 5.7
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 176 caccccgtcatgcccgagctgccaaagcctga 207
           ||||||||| |||| ||| |||||||||||||
Sbjct: 555 caccccgtcgtgccggagttgccaaagcctga 586



 Score = 40.1 bits (20), Expect = 5.7
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 173 ccgcaccccgtcatgcccgagctgccaaagcc 204
           |||||||||||| |||| |||||||| |||||
Sbjct: 471 ccgcaccccgtcgtgccggagctgccgaagcc 502



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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 57/66 (86%)
 Strand = Plus / Minus

                                                                            
Query: 42       tcttcctcgtggctctgctgctctcatgcagctccatgagcagtgcagcacgacacctag 101
                |||||||| |||| |||||||||||||| |||||||| ||||| ||||| ||  |||| |
Sbjct: 24428254 tcttcctcatggcgctgctgctctcatggagctccatcagcagcgcagctcgctacctgg 24428195

                      
Query: 102      aggagg 107
                ||||||
Sbjct: 24428194 aggagg 24428189



 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 51/58 (87%)
 Strand = Plus / Minus

                                                                          
Query: 146      ccggagctgccaaagcccgaactcccgccgcaccccgtcatgcccgagctgccaaagc 203
                |||||||| || ||||| || || ||||||||||||||| |||| |||||||||||||
Sbjct: 24417350 ccggagcttcccaagcctgagctgccgccgcaccccgtcgtgccggagctgccaaagc 24417293



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 52/60 (86%)
 Strand = Plus / Minus

                                                                            
Query: 145      cccggagctgccaaagcccgaactcccgccgcaccccgtcatgcccgagctgccaaagcc 204
                ||||||||| || |||||||| || |||||||||| || | |||| ||||||||||||||
Sbjct: 24428166 cccggagcttccgaagcccgagctgccgccgcacctcgccgtgccggagctgccaaagcc 24428107



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 58/68 (85%)
 Strand = Plus / Minus

                                                                            
Query: 141      tcgtcccggagctgccaaagcccgaactcccgccgcaccccgtcatgcccgagctgccaa 200
                |||| ||||||||||| |||| |||    ||||||||||||||| |||| |||||||| |
Sbjct: 24419311 tcgtgccggagctgcccaagcacgaggagccgccgcaccccgtcgtgccggagctgccga 24419252

                        
Query: 201      agcctgaa 208
                ||||||||
Sbjct: 24419251 agcctgaa 24419244



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 54/63 (85%)
 Strand = Plus / Minus

                                                                            
Query: 42       tcttcctcgtggctctgctgctctcatgcagctccatgagcagtgcagcacgacacctag 101
                ||||||||||||| ||||||||||| |||||| ||||| |||  || ||||||| ||| |
Sbjct: 24417442 tcttcctcgtggcgctgctgctctcgtgcagcaccatgggcaacgctgcacgacgcctgg 24417383

                   
Query: 102      agg 104
                |||
Sbjct: 24417382 agg 24417380



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 51/59 (86%)
 Strand = Plus / Minus

                                                                           
Query: 146      ccggagctgccaaagcccgaactcccgccgcaccccgtcatgcccgagctgccaaagcc 204
                ||||||||||| |||| ||||   || |||||||||||| |||| ||||||||||||||
Sbjct: 24417212 ccggagctgcccaagcacgaagagccaccgcaccccgtcgtgccggagctgccaaagcc 24417154



 Score = 46.1 bits (23), Expect = 0.093
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                   
Query: 170      ccgccgcaccccgtcatgcccgagctgccaaagcc 204
                ||||| ||||||||| |||| ||||||||||||||
Sbjct: 24419447 ccgccacaccccgtcgtgccggagctgccaaagcc 24419413



 Score = 44.1 bits (22), Expect = 0.37
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                      
Query: 56       ctgctgctctcatgcagctccatgagcagtgcagcacg 93
                ||||||||||| | ||||||||||||||| || |||||
Sbjct: 24419894 ctgctgctctcgtccagctccatgagcagcgcggcacg 24419857



 Score = 44.1 bits (22), Expect = 0.37
 Identities = 49/58 (84%)
 Strand = Plus / Minus

                                                                          
Query: 146      ccggagctgccaaagcccgaactcccgccgcaccccgtcatgcccgagctgccaaagc 203
                ||||||||||| |||| ||||   ||||||||||| ||| |||| |||||||| ||||
Sbjct: 24419348 ccggagctgcctaagcacgaagagccgccgcaccctgtcgtgccggagctgcccaagc 24419291



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 141      tcgtcccggagctgccaaagcccga 165
                |||| ||||||||||||||||||||
Sbjct: 24417175 tcgtgccggagctgccaaagcccga 24417151



 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 146      ccggagctgccaaagcccga 165
                ||||||||||||||||||||
Sbjct: 24428123 ccggagctgccaaagcccga 24428104



 Score = 40.1 bits (20), Expect = 5.7
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                                
Query: 323      caccctgctatgcccgagctcccgaagcctga 354
                ||||||||  |||| |||||||||||||||||
Sbjct: 24428009 caccctgcggtgccggagctcccgaagcctga 24427978



 Score = 40.1 bits (20), Expect = 5.7
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                                
Query: 173      ccgcaccccgtcatgcccgagctgccaaagcc 204
                |||||||||||| |||| |||||||| |||||
Sbjct: 24417062 ccgcaccccgtcgtgccggagctgccgaagcc 24417031



 Score = 40.1 bits (20), Expect = 5.7
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                                
Query: 176      caccccgtcatgcccgagctgccaaagcctga 207
                ||||||||| |||| ||| |||||||||||||
Sbjct: 24416978 caccccgtcgtgccggagttgccaaagcctga 24416947



 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 275      gtgccacaccccgtggtgccggag 298
                ||||||||||| ||||||||||||
Sbjct: 24416945 gtgccacaccctgtggtgccggag 24416922



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>dbj|AP003840.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1634_B10
          Length = 100294

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 57/66 (86%)
 Strand = Plus / Minus

                                                                         
Query: 42    tcttcctcgtggctctgctgctctcatgcagctccatgagcagtgcagcacgacacctag 101
             |||||||| |||| |||||||||||||| |||||||| ||||| ||||| ||  |||| |
Sbjct: 54121 tcttcctcatggcgctgctgctctcatggagctccatcagcagcgcagctcgctacctgg 54062

                   
Query: 102   aggagg 107
             ||||||
Sbjct: 54061 aggagg 54056



 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 51/58 (87%)
 Strand = Plus / Minus

                                                                       
Query: 146   ccggagctgccaaagcccgaactcccgccgcaccccgtcatgcccgagctgccaaagc 203
             |||||||| || ||||| || || ||||||||||||||| |||| |||||||||||||
Sbjct: 43217 ccggagcttcccaagcctgagctgccgccgcaccccgtcgtgccggagctgccaaagc 43160



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 52/60 (86%)
 Strand = Plus / Minus

                                                                         
Query: 145   cccggagctgccaaagcccgaactcccgccgcaccccgtcatgcccgagctgccaaagcc 204
             ||||||||| || |||||||| || |||||||||| || | |||| ||||||||||||||
Sbjct: 54033 cccggagcttccgaagcccgagctgccgccgcacctcgccgtgccggagctgccaaagcc 53974



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 58/68 (85%)
 Strand = Plus / Minus

                                                                         
Query: 141   tcgtcccggagctgccaaagcccgaactcccgccgcaccccgtcatgcccgagctgccaa 200
             |||| ||||||||||| |||| |||    ||||||||||||||| |||| |||||||| |
Sbjct: 45178 tcgtgccggagctgcccaagcacgaggagccgccgcaccccgtcgtgccggagctgccga 45119

                     
Query: 201   agcctgaa 208
             ||||||||
Sbjct: 45118 agcctgaa 45111



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 54/63 (85%)
 Strand = Plus / Minus

                                                                         
Query: 42    tcttcctcgtggctctgctgctctcatgcagctccatgagcagtgcagcacgacacctag 101
             ||||||||||||| ||||||||||| |||||| ||||| |||  || ||||||| ||| |
Sbjct: 43309 tcttcctcgtggcgctgctgctctcgtgcagcaccatgggcaacgctgcacgacgcctgg 43250

                
Query: 102   agg 104
             |||
Sbjct: 43249 agg 43247



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 51/59 (86%)
 Strand = Plus / Minus

                                                                        
Query: 146   ccggagctgccaaagcccgaactcccgccgcaccccgtcatgcccgagctgccaaagcc 204
             ||||||||||| |||| ||||   || |||||||||||| |||| ||||||||||||||
Sbjct: 43079 ccggagctgcccaagcacgaagagccaccgcaccccgtcgtgccggagctgccaaagcc 43021



 Score = 46.1 bits (23), Expect = 0.093
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                
Query: 170   ccgccgcaccccgtcatgcccgagctgccaaagcc 204
             ||||| ||||||||| |||| ||||||||||||||
Sbjct: 45314 ccgccacaccccgtcgtgccggagctgccaaagcc 45280



 Score = 44.1 bits (22), Expect = 0.37
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                   
Query: 56    ctgctgctctcatgcagctccatgagcagtgcagcacg 93
             ||||||||||| | ||||||||||||||| || |||||
Sbjct: 45761 ctgctgctctcgtccagctccatgagcagcgcggcacg 45724



 Score = 44.1 bits (22), Expect = 0.37
 Identities = 49/58 (84%)
 Strand = Plus / Minus

                                                                       
Query: 146   ccggagctgccaaagcccgaactcccgccgcaccccgtcatgcccgagctgccaaagc 203
             ||||||||||| |||| ||||   ||||||||||| ||| |||| |||||||| ||||
Sbjct: 45215 ccggagctgcctaagcacgaagagccgccgcaccctgtcgtgccggagctgcccaagc 45158



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 141   tcgtcccggagctgccaaagcccga 165
             |||| ||||||||||||||||||||
Sbjct: 43042 tcgtgccggagctgccaaagcccga 43018



 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 146   ccggagctgccaaagcccga 165
             ||||||||||||||||||||
Sbjct: 53990 ccggagctgccaaagcccga 53971



 Score = 40.1 bits (20), Expect = 5.7
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 323   caccctgctatgcccgagctcccgaagcctga 354
             ||||||||  |||| |||||||||||||||||
Sbjct: 53876 caccctgcggtgccggagctcccgaagcctga 53845



 Score = 40.1 bits (20), Expect = 5.7
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 173   ccgcaccccgtcatgcccgagctgccaaagcc 204
             |||||||||||| |||| |||||||| |||||
Sbjct: 42929 ccgcaccccgtcgtgccggagctgccgaagcc 42898



 Score = 40.1 bits (20), Expect = 5.7
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 176   caccccgtcatgcccgagctgccaaagcctga 207
             ||||||||| |||| ||| |||||||||||||
Sbjct: 42845 caccccgtcgtgccggagttgccaaagcctga 42814



 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 275   gtgccacaccccgtggtgccggag 298
             ||||||||||| ||||||||||||
Sbjct: 42812 gtgccacaccctgtggtgccggag 42789



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>dbj|AK106010.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-206-B01, full
           insert sequence
          Length = 1005

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 51/58 (87%)
 Strand = Plus / Plus

                                                                     
Query: 146 ccggagctgccaaagcccgaactcccgccgcaccccgtcatgcccgagctgccaaagc 203
           |||||||| || ||||| || || ||||||||||||||| |||| |||||||||||||
Sbjct: 183 ccggagcttcccaagcctgagctgccgccgcaccccgtcgtgccggagctgccaaagc 240



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 51/59 (86%)
 Strand = Plus / Plus

                                                                      
Query: 146 ccggagctgccaaagcccgaactcccgccgcaccccgtcatgcccgagctgccaaagcc 204
           ||||||||||| |||| ||||   || |||||||||||| |||| ||||||||||||||
Sbjct: 321 ccggagctgcccaagcacgaagagccaccgcaccccgtcgtgccggagctgccaaagcc 379



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 54/63 (85%)
 Strand = Plus / Plus

                                                                       
Query: 42  tcttcctcgtggctctgctgctctcatgcagctccatgagcagtgcagcacgacacctag 101
           ||||||||||||| ||||||||||| |||||| ||||| |||  || ||||||| ||| |
Sbjct: 91  tcttcctcgtggcgctgctgctctcgtgcagcaccatgggcaacgctgcacgacgcctgg 150

              
Query: 102 agg 104
           |||
Sbjct: 151 agg 153



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 141 tcgtcccggagctgccaaagcccga 165
           |||| ||||||||||||||||||||
Sbjct: 358 tcgtgccggagctgccaaagcccga 382



 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 275 gtgccacaccccgtggtgccggag 298
           ||||||||||| ||||||||||||
Sbjct: 588 gtgccacaccctgtggtgccggag 611



 Score = 40.1 bits (20), Expect = 5.7
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 176 caccccgtcatgcccgagctgccaaagcctga 207
           ||||||||| |||| ||| |||||||||||||
Sbjct: 555 caccccgtcgtgccggagttgccaaagcctga 586



 Score = 40.1 bits (20), Expect = 5.7
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 173 ccgcaccccgtcatgcccgagctgccaaagcc 204
           |||||||||||| |||| |||||||| |||||
Sbjct: 471 ccgcaccccgtcgtgccggagctgccgaagcc 502



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>dbj|AK068696.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013162L16, full
           insert sequence
          Length = 1006

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 51/58 (87%)
 Strand = Plus / Plus

                                                                     
Query: 146 ccggagctgccaaagcccgaactcccgccgcaccccgtcatgcccgagctgccaaagc 203
           |||||||| || ||||| || || ||||||||||||||| |||| |||||||||||||
Sbjct: 186 ccggagcttcccaagcctgagctgccgccgcaccccgtcgtgccggagctgccaaagc 243



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 51/59 (86%)
 Strand = Plus / Plus

                                                                      
Query: 146 ccggagctgccaaagcccgaactcccgccgcaccccgtcatgcccgagctgccaaagcc 204
           ||||||||||| |||| ||||   || |||||||||||| |||| ||||||||||||||
Sbjct: 324 ccggagctgcccaagcacgaagagccaccgcaccccgtcgtgccggagctgccaaagcc 382



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 54/63 (85%)
 Strand = Plus / Plus

                                                                       
Query: 42  tcttcctcgtggctctgctgctctcatgcagctccatgagcagtgcagcacgacacctag 101
           ||||||||||||| ||||||||||| |||||| ||||| |||  || ||||||| ||| |
Sbjct: 94  tcttcctcgtggcgctgctgctctcgtgcagcaccatgggcaacgctgcacgacgcctgg 153

              
Query: 102 agg 104
           |||
Sbjct: 154 agg 156



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 141 tcgtcccggagctgccaaagcccga 165
           |||| ||||||||||||||||||||
Sbjct: 361 tcgtgccggagctgccaaagcccga 385



 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 275 gtgccacaccccgtggtgccggag 298
           ||||||||||| ||||||||||||
Sbjct: 591 gtgccacaccctgtggtgccggag 614



 Score = 40.1 bits (20), Expect = 5.7
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 176 caccccgtcatgcccgagctgccaaagcctga 207
           ||||||||| |||| ||| |||||||||||||
Sbjct: 558 caccccgtcgtgccggagttgccaaagcctga 589



 Score = 40.1 bits (20), Expect = 5.7
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 173 ccgcaccccgtcatgcccgagctgccaaagcc 204
           |||||||||||| |||| |||||||| |||||
Sbjct: 474 ccgcaccccgtcgtgccggagctgccgaagcc 505



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>dbj|AK062673.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-105-G06, full
           insert sequence
          Length = 678

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 57/66 (86%)
 Strand = Plus / Plus

                                                                       
Query: 42  tcttcctcgtggctctgctgctctcatgcagctccatgagcagtgcagcacgacacctag 101
           |||||||| |||| |||||||||||||| |||||||| ||||| ||||| ||  |||| |
Sbjct: 104 tcttcctcatggcgctgctgctctcatggagctccatcagcagcgcagctcgctacctgg 163

                 
Query: 102 aggagg 107
           ||||||
Sbjct: 164 aggagg 169



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 52/60 (86%)
 Strand = Plus / Plus

                                                                       
Query: 145 cccggagctgccaaagcccgaactcccgccgcaccccgtcatgcccgagctgccaaagcc 204
           ||||||||| || |||||||| || |||||||||| || | |||| ||||||||||||||
Sbjct: 192 cccggagcttccgaagcccgagctgccgccgcacctcgccgtgccggagctgccaaagcc 251



 Score = 40.1 bits (20), Expect = 5.7
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 323 caccctgctatgcccgagctcccgaagcctga 354
           ||||||||  |||| |||||||||||||||||
Sbjct: 349 caccctgcggtgccggagctcccgaagcctga 380



 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 146 ccggagctgccaaagcccga 165
           ||||||||||||||||||||
Sbjct: 235 ccggagctgccaaagcccga 254



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>gb|AY112347.1| Zea mays CL32321_1 mRNA sequence
          Length = 636

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 54/62 (87%)
 Strand = Plus / Minus

                                                                       
Query: 146 ccggagctgccaaagcccgaactcccgccgcaccccgtcatgcccgagctgccaaagcct 205
           ||||||||||| ||||||||||| || || ||||| ||| |||| ||||| |||||||||
Sbjct: 434 ccggagctgcccaagcccgaactgcctcctcacccggtcgtgccagagcttccaaagcct 375

             
Query: 206 ga 207
           ||
Sbjct: 374 ga 373



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 191 gagctgccaaagcctgaactacctc 215
           |||||||||||||||||||| ||||
Sbjct: 350 gagctgccaaagcctgaactccctc 326



 Score = 40.1 bits (20), Expect = 5.7
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 149 gagctgccaaagcccgaactcccgccgcaccc 180
           |||||||||||||| |||||||| || |||||
Sbjct: 350 gagctgccaaagcctgaactccctcctcaccc 319



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>ref|XM_479032.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 994

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 58/68 (85%)
 Strand = Plus / Plus

                                                                       
Query: 141 tcgtcccggagctgccaaagcccgaactcccgccgcaccccgtcatgcccgagctgccaa 200
           |||| ||||||||||| |||| |||    ||||||||||||||| |||| |||||||| |
Sbjct: 690 tcgtgccggagctgcccaagcacgaggagccgccgcaccccgtcgtgccggagctgccga 749

                   
Query: 201 agcctgaa 208
           ||||||||
Sbjct: 750 agcctgaa 757



 Score = 46.1 bits (23), Expect = 0.093
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 170 ccgccgcaccccgtcatgcccgagctgccaaagcc 204
           ||||| ||||||||| |||| ||||||||||||||
Sbjct: 554 ccgccacaccccgtcgtgccggagctgccaaagcc 588



 Score = 44.1 bits (22), Expect = 0.37
 Identities = 49/58 (84%)
 Strand = Plus / Plus

                                                                     
Query: 146 ccggagctgccaaagcccgaactcccgccgcaccccgtcatgcccgagctgccaaagc 203
           ||||||||||| |||| ||||   ||||||||||| ||| |||| |||||||| ||||
Sbjct: 653 ccggagctgcctaagcacgaagagccgccgcaccctgtcgtgccggagctgcccaagc 710



 Score = 44.1 bits (22), Expect = 0.37
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 56  ctgctgctctcatgcagctccatgagcagtgcagcacg 93
           ||||||||||| | ||||||||||||||| || |||||
Sbjct: 107 ctgctgctctcgtccagctccatgagcagcgcggcacg 144



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>ref|XM_507388.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1634_B10.113
           mRNA
          Length = 1071

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 58/68 (85%)
 Strand = Plus / Plus

                                                                       
Query: 141 tcgtcccggagctgccaaagcccgaactcccgccgcaccccgtcatgcccgagctgccaa 200
           |||| ||||||||||| |||| |||    ||||||||||||||| |||| |||||||| |
Sbjct: 689 tcgtgccggagctgcccaagcacgaggagccgccgcaccccgtcgtgccggagctgccga 748

                   
Query: 201 agcctgaa 208
           ||||||||
Sbjct: 749 agcctgaa 756



 Score = 46.1 bits (23), Expect = 0.093
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 170 ccgccgcaccccgtcatgcccgagctgccaaagcc 204
           ||||| ||||||||| |||| ||||||||||||||
Sbjct: 553 ccgccacaccccgtcgtgccggagctgccaaagcc 587



 Score = 44.1 bits (22), Expect = 0.37
 Identities = 49/58 (84%)
 Strand = Plus / Plus

                                                                     
Query: 146 ccggagctgccaaagcccgaactcccgccgcaccccgtcatgcccgagctgccaaagc 203
           ||||||||||| |||| ||||   ||||||||||| ||| |||| |||||||| ||||
Sbjct: 652 ccggagctgcctaagcacgaagagccgccgcaccctgtcgtgccggagctgcccaagc 709



 Score = 44.1 bits (22), Expect = 0.37
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 56  ctgctgctctcatgcagctccatgagcagtgcagcacg 93
           ||||||||||| | ||||||||||||||| || |||||
Sbjct: 106 ctgctgctctcgtccagctccatgagcagcgcggcacg 143



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>ref|XM_506448.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1634_B10.113
           mRNA
          Length = 1071

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 58/68 (85%)
 Strand = Plus / Plus

                                                                       
Query: 141 tcgtcccggagctgccaaagcccgaactcccgccgcaccccgtcatgcccgagctgccaa 200
           |||| ||||||||||| |||| |||    ||||||||||||||| |||| |||||||| |
Sbjct: 689 tcgtgccggagctgcccaagcacgaggagccgccgcaccccgtcgtgccggagctgccga 748

                   
Query: 201 agcctgaa 208
           ||||||||
Sbjct: 749 agcctgaa 756



 Score = 46.1 bits (23), Expect = 0.093
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 170 ccgccgcaccccgtcatgcccgagctgccaaagcc 204
           ||||| ||||||||| |||| ||||||||||||||
Sbjct: 553 ccgccacaccccgtcgtgccggagctgccaaagcc 587



 Score = 44.1 bits (22), Expect = 0.37
 Identities = 49/58 (84%)
 Strand = Plus / Plus

                                                                     
Query: 146 ccggagctgccaaagcccgaactcccgccgcaccccgtcatgcccgagctgccaaagc 203
           ||||||||||| |||| ||||   ||||||||||| ||| |||| |||||||| ||||
Sbjct: 652 ccggagctgcctaagcacgaagagccgccgcaccctgtcgtgccggagctgcccaagc 709



 Score = 44.1 bits (22), Expect = 0.37
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 56  ctgctgctctcatgcagctccatgagcagtgcagcacg 93
           ||||||||||| | ||||||||||||||| || |||||
Sbjct: 106 ctgctgctctcgtccagctccatgagcagcgcggcacg 143



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>dbj|AK106214.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-208-G11, full
           insert sequence
          Length = 1071

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 58/68 (85%)
 Strand = Plus / Plus

                                                                       
Query: 141 tcgtcccggagctgccaaagcccgaactcccgccgcaccccgtcatgcccgagctgccaa 200
           |||| ||||||||||| |||| |||    ||||||||||||||| |||| |||||||| |
Sbjct: 689 tcgtgccggagctgcccaagcacgaggagccgccgcaccccgtcgtgccggagctgccga 748

                   
Query: 201 agcctgaa 208
           ||||||||
Sbjct: 749 agcctgaa 756



 Score = 46.1 bits (23), Expect = 0.093
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 170 ccgccgcaccccgtcatgcccgagctgccaaagcc 204
           ||||| ||||||||| |||| ||||||||||||||
Sbjct: 553 ccgccacaccccgtcgtgccggagctgccaaagcc 587



 Score = 44.1 bits (22), Expect = 0.37
 Identities = 49/58 (84%)
 Strand = Plus / Plus

                                                                     
Query: 146 ccggagctgccaaagcccgaactcccgccgcaccccgtcatgcccgagctgccaaagc 203
           ||||||||||| |||| ||||   ||||||||||| ||| |||| |||||||| ||||
Sbjct: 652 ccggagctgcctaagcacgaagagccgccgcaccctgtcgtgccggagctgcccaagc 709



 Score = 44.1 bits (22), Expect = 0.37
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 56  ctgctgctctcatgcagctccatgagcagtgcagcacg 93
           ||||||||||| | ||||||||||||||| || |||||
Sbjct: 106 ctgctgctctcgtccagctccatgagcagcgcggcacg 143



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>dbj|AK105918.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-H12, full
           insert sequence
          Length = 1071

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 58/68 (85%)
 Strand = Plus / Plus

                                                                       
Query: 141 tcgtcccggagctgccaaagcccgaactcccgccgcaccccgtcatgcccgagctgccaa 200
           |||| ||||||||||| |||| |||    ||||||||||||||| |||| |||||||| |
Sbjct: 689 tcgtgccggagctgcccaagcacgaggagccgccgcaccccgtcgtgccggagctgccga 748

                   
Query: 201 agcctgaa 208
           ||||||||
Sbjct: 749 agcctgaa 756



 Score = 46.1 bits (23), Expect = 0.093
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 170 ccgccgcaccccgtcatgcccgagctgccaaagcc 204
           ||||| ||||||||| |||| ||||||||||||||
Sbjct: 553 ccgccacaccccgtcgtgccggagctgccaaagcc 587



 Score = 44.1 bits (22), Expect = 0.37
 Identities = 49/58 (84%)
 Strand = Plus / Plus

                                                                     
Query: 146 ccggagctgccaaagcccgaactcccgccgcaccccgtcatgcccgagctgccaaagc 203
           ||||||||||| |||| ||||   ||||||||||| ||| |||| |||||||| ||||
Sbjct: 652 ccggagctgcctaagcacgaagagccgccgcaccctgtcgtgccggagctgcccaagc 709



 Score = 44.1 bits (22), Expect = 0.37
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 56  ctgctgctctcatgcagctccatgagcagtgcagcacg 93
           ||||||||||| | ||||||||||||||| || |||||
Sbjct: 106 ctgctgctctcgtccagctccatgagcagcgcggcacg 143



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>dbj|AK070771.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023069L14, full
           insert sequence
          Length = 988

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 58/68 (85%)
 Strand = Plus / Plus

                                                                       
Query: 141 tcgtcccggagctgccaaagcccgaactcccgccgcaccccgtcatgcccgagctgccaa 200
           |||| ||||||||||| |||| |||    ||||||||||||||| |||| |||||||| |
Sbjct: 684 tcgtgccggagctgcccaagcacgaggagccgccgcaccccgtcgtgccggagctgccga 743

                   
Query: 201 agcctgaa 208
           ||||||||
Sbjct: 744 agcctgaa 751



 Score = 46.1 bits (23), Expect = 0.093
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 170 ccgccgcaccccgtcatgcccgagctgccaaagcc 204
           ||||| ||||||||| |||| ||||||||||||||
Sbjct: 549 ccgccacaccccgtcgtgccggagctgccaaagcc 583



 Score = 44.1 bits (22), Expect = 0.37
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 56  ctgctgctctcatgcagctccatgagcagtgcagcacg 93
           ||||||||||| | ||||||||||||||| || |||||
Sbjct: 107 ctgctgctctcgtccagctccatgagcagcgcggcacg 144



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>gb|AC144762.3| Mus musculus BAC clone RP24-95D6 from 3, complete sequence
          Length = 198005

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 54    ctctgctgctctcatgcagct 74
             |||||||||||||||||||||
Sbjct: 83764 ctctgctgctctcatgcagct 83744



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>gb|BC109470.1| Danio rerio cDNA clone IMAGE:7395403, containing frame-shift errors
          Length = 1595

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 6   acatcatgctgcgcaacaac 25
           ||||||||||||||||||||
Sbjct: 669 acatcatgctgcgcaacaac 688



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>gb|BC083410.1| Danio rerio zgc:103514, mRNA (cDNA clone MGC:103514 IMAGE:7239253),
           complete cds
          Length = 1656

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 6   acatcatgctgcgcaacaac 25
           ||||||||||||||||||||
Sbjct: 733 acatcatgctgcgcaacaac 752



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>emb|AJ621385.1| Gallus gallus RAD50 gene (partial), IL5 gene, IRF1 gene, OCTN2 gene and
             OCTN1 gene (partial)
          Length = 113629

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 57    tgctgctctcatgcagctcc 76
             ||||||||||||||||||||
Sbjct: 44065 tgctgctctcatgcagctcc 44046



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>gb|AC010142.4|AC010142 Homo sapiens BAC clone RP11-240N18 from Y, complete sequence
          Length = 136462

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 28    catgggctcctttgtcttcc 47
             ||||||||||||||||||||
Sbjct: 37946 catgggctcctttgtcttcc 37927



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>ref|NM_001006014.1| Danio rerio zgc:103514 (zgc:103514), mRNA
          Length = 1656

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 6   acatcatgctgcgcaacaac 25
           ||||||||||||||||||||
Sbjct: 733 acatcatgctgcgcaacaac 752



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>gb|AC124409.5| Mus musculus BAC clone RP24-262P14 from 8, complete sequence
          Length = 178779

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 44    ttcctcgtggctctgctgct 63
             ||||||||||||||||||||
Sbjct: 23514 ttcctcgtggctctgctgct 23533



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>gb|AC159985.2| Gallus gallus BAC clone CH261-18F10 from chromosome unknown, complete
              sequence
          Length = 211288

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 57     tgctgctctcatgcagctcc 76
              ||||||||||||||||||||
Sbjct: 177030 tgctgctctcatgcagctcc 177011



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>emb|AL713991.13| Mouse DNA sequence from clone RP23-132C16 on chromosome 1, complete
             sequence
          Length = 210040

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 77    atgagcagtgcagcacgaca 96
             ||||||||||||||||||||
Sbjct: 47706 atgagcagtgcagcacgaca 47687


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,599,335
Number of Sequences: 3902068
Number of extensions: 2599335
Number of successful extensions: 52555
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 52269
Number of HSP's gapped (non-prelim): 278
length of query: 426
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 404
effective length of database: 17,147,199,772
effective search space: 6927468707888
effective search space used: 6927468707888
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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