No.
Definition
Score (bits)
E Value
1 ref|XM_479036.1| Oryza sativa (japonica cultivar-group), mRNA
60
6e-06
2 ref|XM_506447.1| PREDICTED Oryza sativa (japonica cultivar-group...
60
6e-06
3 ref|XM_479031.1| Oryza sativa (japonica cultivar-group), mRNA
60
6e-06
4 dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D...
60
6e-06
5 dbj|AP003840.2| Oryza sativa (japonica cultivar-group) genomic D...
60
6e-06
6 dbj|AK106010.1| Oryza sativa (japonica cultivar-group) cDNA clon...
60
6e-06
7 dbj|AK068696.1| Oryza sativa (japonica cultivar-group) cDNA clon...
60
6e-06
8 dbj|AK062673.1| Oryza sativa (japonica cultivar-group) cDNA clon...
60
6e-06
9 gb|AY112347.1| Zea mays CL32321_1 mRNA sequence
60
6e-06
10 ref|XM_479032.1| Oryza sativa (japonica cultivar-group), mRNA
56
1e-04
11 ref|XM_507388.1| PREDICTED Oryza sativa (japonica cultivar-group...
56
1e-04
12 ref|XM_506448.1| PREDICTED Oryza sativa (japonica cultivar-group...
56
1e-04
13 dbj|AK106214.1| Oryza sativa (japonica cultivar-group) cDNA clon...
56
1e-04
14 dbj|AK105918.1| Oryza sativa (japonica cultivar-group) cDNA clon...
56
1e-04
15 dbj|AK070771.1| Oryza sativa (japonica cultivar-group) cDNA clon...
56
1e-04
16 gb|AC144762.3| Mus musculus BAC clone RP24-95D6 from 3, complete...
42
1.4
17 gb|BC109470.1| Danio rerio cDNA clone IMAGE:7395403, containing ...
40
5.7
18 gb|BC083410.1| Danio rerio zgc:103514, mRNA (cDNA clone MGC:1035...
40
5.7
19 emb|AJ621385.1| Gallus gallus RAD50 gene (partial), IL5 gene, IR...
40
5.7
20 gb|AC010142.4|AC010142 Homo sapiens BAC clone RP11-240N18 from Y...
40
5.7
21 ref|NM_001006014.1| Danio rerio zgc:103514 (zgc:103514), mRNA
40
5.7
22 gb|AC124409.5| Mus musculus BAC clone RP24-262P14 from 8, comple...
40
5.7
23 gb|AC159985.2| Gallus gallus BAC clone CH261-18F10 from chromoso...
40
5.7
24 emb|AL713991.13| Mouse DNA sequence from clone RP23-132C16 on ch...
40
5.7
>ref|XM_506447.1 | PREDICTED Oryza sativa (japonica cultivar-group), OJ1634_B10.112
mRNA
Length = 1006
Score = 60.0 bits (30), Expect = 6e-06
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 146 ccggagctgccaaagcccgaactcccgccgcaccccgtcatgcccgagctgccaaagc 203
|||||||| || ||||| || || ||||||||||||||| |||| |||||||||||||
Sbjct: 186 ccggagcttcccaagcctgagctgccgccgcaccccgtcgtgccggagctgccaaagc 243
Score = 54.0 bits (27), Expect = 4e-04
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 146 ccggagctgccaaagcccgaactcccgccgcaccccgtcatgcccgagctgccaaagcc 204
||||||||||| |||| |||| || |||||||||||| |||| ||||||||||||||
Sbjct: 324 ccggagctgcccaagcacgaagagccaccgcaccccgtcgtgccggagctgccaaagcc 382
Score = 54.0 bits (27), Expect = 4e-04
Identities = 54/63 (85%)
Strand = Plus / Plus
Query: 42 tcttcctcgtggctctgctgctctcatgcagctccatgagcagtgcagcacgacacctag 101
||||||||||||| ||||||||||| |||||| ||||| ||| || ||||||| ||| |
Sbjct: 94 tcttcctcgtggcgctgctgctctcgtgcagcaccatgggcaacgctgcacgacgcctgg 153
Query: 102 agg 104
|||
Sbjct: 154 agg 156
Score = 42.1 bits (21), Expect = 1.4
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 141 tcgtcccggagctgccaaagcccga 165
|||| ||||||||||||||||||||
Sbjct: 361 tcgtgccggagctgccaaagcccga 385
Score = 40.1 bits (20), Expect = 5.7
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 275 gtgccacaccccgtggtgccggag 298
||||||||||| ||||||||||||
Sbjct: 591 gtgccacaccctgtggtgccggag 614
Score = 40.1 bits (20), Expect = 5.7
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 176 caccccgtcatgcccgagctgccaaagcctga 207
||||||||| |||| ||| |||||||||||||
Sbjct: 558 caccccgtcgtgccggagttgccaaagcctga 589
Score = 40.1 bits (20), Expect = 5.7
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 173 ccgcaccccgtcatgcccgagctgccaaagcc 204
|||||||||||| |||| |||||||| |||||
Sbjct: 474 ccgcaccccgtcgtgccggagctgccgaagcc 505
>ref|XM_479031.1 | Oryza sativa (japonica cultivar-group), mRNA
Length = 1005
Score = 60.0 bits (30), Expect = 6e-06
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 146 ccggagctgccaaagcccgaactcccgccgcaccccgtcatgcccgagctgccaaagc 203
|||||||| || ||||| || || ||||||||||||||| |||| |||||||||||||
Sbjct: 183 ccggagcttcccaagcctgagctgccgccgcaccccgtcgtgccggagctgccaaagc 240
Score = 54.0 bits (27), Expect = 4e-04
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 146 ccggagctgccaaagcccgaactcccgccgcaccccgtcatgcccgagctgccaaagcc 204
||||||||||| |||| |||| || |||||||||||| |||| ||||||||||||||
Sbjct: 321 ccggagctgcccaagcacgaagagccaccgcaccccgtcgtgccggagctgccaaagcc 379
Score = 54.0 bits (27), Expect = 4e-04
Identities = 54/63 (85%)
Strand = Plus / Plus
Query: 42 tcttcctcgtggctctgctgctctcatgcagctccatgagcagtgcagcacgacacctag 101
||||||||||||| ||||||||||| |||||| ||||| ||| || ||||||| ||| |
Sbjct: 91 tcttcctcgtggcgctgctgctctcgtgcagcaccatgggcaacgctgcacgacgcctgg 150
Query: 102 agg 104
|||
Sbjct: 151 agg 153
Score = 42.1 bits (21), Expect = 1.4
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 141 tcgtcccggagctgccaaagcccga 165
|||| ||||||||||||||||||||
Sbjct: 358 tcgtgccggagctgccaaagcccga 382
Score = 40.1 bits (20), Expect = 5.7
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 275 gtgccacaccccgtggtgccggag 298
||||||||||| ||||||||||||
Sbjct: 588 gtgccacaccctgtggtgccggag 611
Score = 40.1 bits (20), Expect = 5.7
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 176 caccccgtcatgcccgagctgccaaagcctga 207
||||||||| |||| ||| |||||||||||||
Sbjct: 555 caccccgtcgtgccggagttgccaaagcctga 586
Score = 40.1 bits (20), Expect = 5.7
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 173 ccgcaccccgtcatgcccgagctgccaaagcc 204
|||||||||||| |||| |||||||| |||||
Sbjct: 471 ccgcaccccgtcgtgccggagctgccgaagcc 502
>dbj|AP008213.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
sequence
Length = 29644043
Score = 60.0 bits (30), Expect = 6e-06
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 42 tcttcctcgtggctctgctgctctcatgcagctccatgagcagtgcagcacgacacctag 101
|||||||| |||| |||||||||||||| |||||||| ||||| ||||| || |||| |
Sbjct: 24428254 tcttcctcatggcgctgctgctctcatggagctccatcagcagcgcagctcgctacctgg 24428195
Query: 102 aggagg 107
||||||
Sbjct: 24428194 aggagg 24428189
Score = 60.0 bits (30), Expect = 6e-06
Identities = 51/58 (87%)
Strand = Plus / Minus
Query: 146 ccggagctgccaaagcccgaactcccgccgcaccccgtcatgcccgagctgccaaagc 203
|||||||| || ||||| || || ||||||||||||||| |||| |||||||||||||
Sbjct: 24417350 ccggagcttcccaagcctgagctgccgccgcaccccgtcgtgccggagctgccaaagc 24417293
Score = 56.0 bits (28), Expect = 1e-04
Identities = 52/60 (86%)
Strand = Plus / Minus
Query: 145 cccggagctgccaaagcccgaactcccgccgcaccccgtcatgcccgagctgccaaagcc 204
||||||||| || |||||||| || |||||||||| || | |||| ||||||||||||||
Sbjct: 24428166 cccggagcttccgaagcccgagctgccgccgcacctcgccgtgccggagctgccaaagcc 24428107
Score = 56.0 bits (28), Expect = 1e-04
Identities = 58/68 (85%)
Strand = Plus / Minus
Query: 141 tcgtcccggagctgccaaagcccgaactcccgccgcaccccgtcatgcccgagctgccaa 200
|||| ||||||||||| |||| ||| ||||||||||||||| |||| |||||||| |
Sbjct: 24419311 tcgtgccggagctgcccaagcacgaggagccgccgcaccccgtcgtgccggagctgccga 24419252
Query: 201 agcctgaa 208
||||||||
Sbjct: 24419251 agcctgaa 24419244
Score = 54.0 bits (27), Expect = 4e-04
Identities = 54/63 (85%)
Strand = Plus / Minus
Query: 42 tcttcctcgtggctctgctgctctcatgcagctccatgagcagtgcagcacgacacctag 101
||||||||||||| ||||||||||| |||||| ||||| ||| || ||||||| ||| |
Sbjct: 24417442 tcttcctcgtggcgctgctgctctcgtgcagcaccatgggcaacgctgcacgacgcctgg 24417383
Query: 102 agg 104
|||
Sbjct: 24417382 agg 24417380
Score = 54.0 bits (27), Expect = 4e-04
Identities = 51/59 (86%)
Strand = Plus / Minus
Query: 146 ccggagctgccaaagcccgaactcccgccgcaccccgtcatgcccgagctgccaaagcc 204
||||||||||| |||| |||| || |||||||||||| |||| ||||||||||||||
Sbjct: 24417212 ccggagctgcccaagcacgaagagccaccgcaccccgtcgtgccggagctgccaaagcc 24417154
Score = 46.1 bits (23), Expect = 0.093
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 170 ccgccgcaccccgtcatgcccgagctgccaaagcc 204
||||| ||||||||| |||| ||||||||||||||
Sbjct: 24419447 ccgccacaccccgtcgtgccggagctgccaaagcc 24419413
Score = 44.1 bits (22), Expect = 0.37
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 56 ctgctgctctcatgcagctccatgagcagtgcagcacg 93
||||||||||| | ||||||||||||||| || |||||
Sbjct: 24419894 ctgctgctctcgtccagctccatgagcagcgcggcacg 24419857
Score = 44.1 bits (22), Expect = 0.37
Identities = 49/58 (84%)
Strand = Plus / Minus
Query: 146 ccggagctgccaaagcccgaactcccgccgcaccccgtcatgcccgagctgccaaagc 203
||||||||||| |||| |||| ||||||||||| ||| |||| |||||||| ||||
Sbjct: 24419348 ccggagctgcctaagcacgaagagccgccgcaccctgtcgtgccggagctgcccaagc 24419291
Score = 42.1 bits (21), Expect = 1.4
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 141 tcgtcccggagctgccaaagcccga 165
|||| ||||||||||||||||||||
Sbjct: 24417175 tcgtgccggagctgccaaagcccga 24417151
Score = 40.1 bits (20), Expect = 5.7
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 146 ccggagctgccaaagcccga 165
||||||||||||||||||||
Sbjct: 24428123 ccggagctgccaaagcccga 24428104
Score = 40.1 bits (20), Expect = 5.7
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 323 caccctgctatgcccgagctcccgaagcctga 354
|||||||| |||| |||||||||||||||||
Sbjct: 24428009 caccctgcggtgccggagctcccgaagcctga 24427978
Score = 40.1 bits (20), Expect = 5.7
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 173 ccgcaccccgtcatgcccgagctgccaaagcc 204
|||||||||||| |||| |||||||| |||||
Sbjct: 24417062 ccgcaccccgtcgtgccggagctgccgaagcc 24417031
Score = 40.1 bits (20), Expect = 5.7
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 176 caccccgtcatgcccgagctgccaaagcctga 207
||||||||| |||| ||| |||||||||||||
Sbjct: 24416978 caccccgtcgtgccggagttgccaaagcctga 24416947
Score = 40.1 bits (20), Expect = 5.7
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 275 gtgccacaccccgtggtgccggag 298
||||||||||| ||||||||||||
Sbjct: 24416945 gtgccacaccctgtggtgccggag 24416922
>dbj|AP003840.2 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
clone:OJ1634_B10
Length = 100294
Score = 60.0 bits (30), Expect = 6e-06
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 42 tcttcctcgtggctctgctgctctcatgcagctccatgagcagtgcagcacgacacctag 101
|||||||| |||| |||||||||||||| |||||||| ||||| ||||| || |||| |
Sbjct: 54121 tcttcctcatggcgctgctgctctcatggagctccatcagcagcgcagctcgctacctgg 54062
Query: 102 aggagg 107
||||||
Sbjct: 54061 aggagg 54056
Score = 60.0 bits (30), Expect = 6e-06
Identities = 51/58 (87%)
Strand = Plus / Minus
Query: 146 ccggagctgccaaagcccgaactcccgccgcaccccgtcatgcccgagctgccaaagc 203
|||||||| || ||||| || || ||||||||||||||| |||| |||||||||||||
Sbjct: 43217 ccggagcttcccaagcctgagctgccgccgcaccccgtcgtgccggagctgccaaagc 43160
Score = 56.0 bits (28), Expect = 1e-04
Identities = 52/60 (86%)
Strand = Plus / Minus
Query: 145 cccggagctgccaaagcccgaactcccgccgcaccccgtcatgcccgagctgccaaagcc 204
||||||||| || |||||||| || |||||||||| || | |||| ||||||||||||||
Sbjct: 54033 cccggagcttccgaagcccgagctgccgccgcacctcgccgtgccggagctgccaaagcc 53974
Score = 56.0 bits (28), Expect = 1e-04
Identities = 58/68 (85%)
Strand = Plus / Minus
Query: 141 tcgtcccggagctgccaaagcccgaactcccgccgcaccccgtcatgcccgagctgccaa 200
|||| ||||||||||| |||| ||| ||||||||||||||| |||| |||||||| |
Sbjct: 45178 tcgtgccggagctgcccaagcacgaggagccgccgcaccccgtcgtgccggagctgccga 45119
Query: 201 agcctgaa 208
||||||||
Sbjct: 45118 agcctgaa 45111
Score = 54.0 bits (27), Expect = 4e-04
Identities = 54/63 (85%)
Strand = Plus / Minus
Query: 42 tcttcctcgtggctctgctgctctcatgcagctccatgagcagtgcagcacgacacctag 101
||||||||||||| ||||||||||| |||||| ||||| ||| || ||||||| ||| |
Sbjct: 43309 tcttcctcgtggcgctgctgctctcgtgcagcaccatgggcaacgctgcacgacgcctgg 43250
Query: 102 agg 104
|||
Sbjct: 43249 agg 43247
Score = 54.0 bits (27), Expect = 4e-04
Identities = 51/59 (86%)
Strand = Plus / Minus
Query: 146 ccggagctgccaaagcccgaactcccgccgcaccccgtcatgcccgagctgccaaagcc 204
||||||||||| |||| |||| || |||||||||||| |||| ||||||||||||||
Sbjct: 43079 ccggagctgcccaagcacgaagagccaccgcaccccgtcgtgccggagctgccaaagcc 43021
Score = 46.1 bits (23), Expect = 0.093
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 170 ccgccgcaccccgtcatgcccgagctgccaaagcc 204
||||| ||||||||| |||| ||||||||||||||
Sbjct: 45314 ccgccacaccccgtcgtgccggagctgccaaagcc 45280
Score = 44.1 bits (22), Expect = 0.37
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 56 ctgctgctctcatgcagctccatgagcagtgcagcacg 93
||||||||||| | ||||||||||||||| || |||||
Sbjct: 45761 ctgctgctctcgtccagctccatgagcagcgcggcacg 45724
Score = 44.1 bits (22), Expect = 0.37
Identities = 49/58 (84%)
Strand = Plus / Minus
Query: 146 ccggagctgccaaagcccgaactcccgccgcaccccgtcatgcccgagctgccaaagc 203
||||||||||| |||| |||| ||||||||||| ||| |||| |||||||| ||||
Sbjct: 45215 ccggagctgcctaagcacgaagagccgccgcaccctgtcgtgccggagctgcccaagc 45158
Score = 42.1 bits (21), Expect = 1.4
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 141 tcgtcccggagctgccaaagcccga 165
|||| ||||||||||||||||||||
Sbjct: 43042 tcgtgccggagctgccaaagcccga 43018
Score = 40.1 bits (20), Expect = 5.7
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 146 ccggagctgccaaagcccga 165
||||||||||||||||||||
Sbjct: 53990 ccggagctgccaaagcccga 53971
Score = 40.1 bits (20), Expect = 5.7
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 323 caccctgctatgcccgagctcccgaagcctga 354
|||||||| |||| |||||||||||||||||
Sbjct: 53876 caccctgcggtgccggagctcccgaagcctga 53845
Score = 40.1 bits (20), Expect = 5.7
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 173 ccgcaccccgtcatgcccgagctgccaaagcc 204
|||||||||||| |||| |||||||| |||||
Sbjct: 42929 ccgcaccccgtcgtgccggagctgccgaagcc 42898
Score = 40.1 bits (20), Expect = 5.7
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 176 caccccgtcatgcccgagctgccaaagcctga 207
||||||||| |||| ||| |||||||||||||
Sbjct: 42845 caccccgtcgtgccggagttgccaaagcctga 42814
Score = 40.1 bits (20), Expect = 5.7
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 275 gtgccacaccccgtggtgccggag 298
||||||||||| ||||||||||||
Sbjct: 42812 gtgccacaccctgtggtgccggag 42789
>dbj|AK106010.1 | Oryza sativa (japonica cultivar-group) cDNA clone:001-206-B01, full
insert sequence
Length = 1005
Score = 60.0 bits (30), Expect = 6e-06
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 146 ccggagctgccaaagcccgaactcccgccgcaccccgtcatgcccgagctgccaaagc 203
|||||||| || ||||| || || ||||||||||||||| |||| |||||||||||||
Sbjct: 183 ccggagcttcccaagcctgagctgccgccgcaccccgtcgtgccggagctgccaaagc 240
Score = 54.0 bits (27), Expect = 4e-04
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 146 ccggagctgccaaagcccgaactcccgccgcaccccgtcatgcccgagctgccaaagcc 204
||||||||||| |||| |||| || |||||||||||| |||| ||||||||||||||
Sbjct: 321 ccggagctgcccaagcacgaagagccaccgcaccccgtcgtgccggagctgccaaagcc 379
Score = 54.0 bits (27), Expect = 4e-04
Identities = 54/63 (85%)
Strand = Plus / Plus
Query: 42 tcttcctcgtggctctgctgctctcatgcagctccatgagcagtgcagcacgacacctag 101
||||||||||||| ||||||||||| |||||| ||||| ||| || ||||||| ||| |
Sbjct: 91 tcttcctcgtggcgctgctgctctcgtgcagcaccatgggcaacgctgcacgacgcctgg 150
Query: 102 agg 104
|||
Sbjct: 151 agg 153
Score = 42.1 bits (21), Expect = 1.4
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 141 tcgtcccggagctgccaaagcccga 165
|||| ||||||||||||||||||||
Sbjct: 358 tcgtgccggagctgccaaagcccga 382
Score = 40.1 bits (20), Expect = 5.7
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 275 gtgccacaccccgtggtgccggag 298
||||||||||| ||||||||||||
Sbjct: 588 gtgccacaccctgtggtgccggag 611
Score = 40.1 bits (20), Expect = 5.7
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 176 caccccgtcatgcccgagctgccaaagcctga 207
||||||||| |||| ||| |||||||||||||
Sbjct: 555 caccccgtcgtgccggagttgccaaagcctga 586
Score = 40.1 bits (20), Expect = 5.7
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 173 ccgcaccccgtcatgcccgagctgccaaagcc 204
|||||||||||| |||| |||||||| |||||
Sbjct: 471 ccgcaccccgtcgtgccggagctgccgaagcc 502
>dbj|AK068696.1 | Oryza sativa (japonica cultivar-group) cDNA clone:J013162L16, full
insert sequence
Length = 1006
Score = 60.0 bits (30), Expect = 6e-06
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 146 ccggagctgccaaagcccgaactcccgccgcaccccgtcatgcccgagctgccaaagc 203
|||||||| || ||||| || || ||||||||||||||| |||| |||||||||||||
Sbjct: 186 ccggagcttcccaagcctgagctgccgccgcaccccgtcgtgccggagctgccaaagc 243
Score = 54.0 bits (27), Expect = 4e-04
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 146 ccggagctgccaaagcccgaactcccgccgcaccccgtcatgcccgagctgccaaagcc 204
||||||||||| |||| |||| || |||||||||||| |||| ||||||||||||||
Sbjct: 324 ccggagctgcccaagcacgaagagccaccgcaccccgtcgtgccggagctgccaaagcc 382
Score = 54.0 bits (27), Expect = 4e-04
Identities = 54/63 (85%)
Strand = Plus / Plus
Query: 42 tcttcctcgtggctctgctgctctcatgcagctccatgagcagtgcagcacgacacctag 101
||||||||||||| ||||||||||| |||||| ||||| ||| || ||||||| ||| |
Sbjct: 94 tcttcctcgtggcgctgctgctctcgtgcagcaccatgggcaacgctgcacgacgcctgg 153
Query: 102 agg 104
|||
Sbjct: 154 agg 156
Score = 42.1 bits (21), Expect = 1.4
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 141 tcgtcccggagctgccaaagcccga 165
|||| ||||||||||||||||||||
Sbjct: 361 tcgtgccggagctgccaaagcccga 385
Score = 40.1 bits (20), Expect = 5.7
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 275 gtgccacaccccgtggtgccggag 298
||||||||||| ||||||||||||
Sbjct: 591 gtgccacaccctgtggtgccggag 614
Score = 40.1 bits (20), Expect = 5.7
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 176 caccccgtcatgcccgagctgccaaagcctga 207
||||||||| |||| ||| |||||||||||||
Sbjct: 558 caccccgtcgtgccggagttgccaaagcctga 589
Score = 40.1 bits (20), Expect = 5.7
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 173 ccgcaccccgtcatgcccgagctgccaaagcc 204
|||||||||||| |||| |||||||| |||||
Sbjct: 474 ccgcaccccgtcgtgccggagctgccgaagcc 505
>emb|AL713991.13 | Mouse DNA sequence from clone RP23-132C16 on chromosome 1, complete
sequence
Length = 210040
Score = 40.1 bits (20), Expect = 5.7
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 77 atgagcagtgcagcacgaca 96
||||||||||||||||||||
Sbjct: 47706 atgagcagtgcagcacgaca 47687
Database: nt
Posted date: May 29, 2006 11:10 AM
Number of letters in database: 3,984,495,279
Number of sequences in database: 917,343
Database: /shigen/export/home/twatanab/db/nt/nt.01
Posted date: May 29, 2006 11:16 AM
Number of letters in database: 3,988,174,986
Number of sequences in database: 835,257
Database: /shigen/export/home/twatanab/db/nt/nt.02
Posted date: May 29, 2006 11:21 AM
Number of letters in database: 3,991,246,324
Number of sequences in database: 771,481
Database: /shigen/export/home/twatanab/db/nt/nt.03
Posted date: May 29, 2006 11:27 AM
Number of letters in database: 3,990,718,311
Number of sequences in database: 977,174
Database: /shigen/export/home/twatanab/db/nt/nt.04
Posted date: May 29, 2006 11:29 AM
Number of letters in database: 1,278,410,368
Number of sequences in database: 400,813
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,599,335
Number of Sequences: 3902068
Number of extensions: 2599335
Number of successful extensions: 52555
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 52269
Number of HSP's gapped (non-prelim): 278
length of query: 426
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 404
effective length of database: 17,147,199,772
effective search space: 6927468707888
effective search space used: 6927468707888
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)