ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart43g10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_483183.1| Oryza sativa (japonica cultivar-group), mRNA 307 2e-80
2dbj|AK058215.1| Oryza sativa (japonica cultivar-group) cDNA clon... 307 2e-80
3emb|AM234671.1| Oryza sativa mRNA for COP9 signalosome subunit 6... 307 2e-80
4gb|BT017731.1| Zea mays clone EL01N0448B12.c mRNA sequence 260 5e-66
5gb|AY104920.1| Zea mays PCO100740 mRNA sequence 260 5e-66
6gb|AF072848.1|AF072848 Oryza sativa Mov34 homolog mRNA, partial cds 246 7e-62
7dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 178 1e-41
8dbj|AP003873.2| Oryza sativa (japonica cultivar-group) genomic D... 178 1e-41
9ref|NM_125011.2| Arabidopsis thaliana CSN6A AT5G56280 (CSN6A) mR... 84 6e-13
10gb|AY048692.1| Arabidopsis thaliana COP9 complex subunit 6 mRNA,... 84 6e-13
11emb|BX832027.1|CNS09YTR Arabidopsis thaliana Full-length cDNA Co... 84 6e-13
12gb|AF395063.1|AF395063 Arabidopsis thaliana CSN complex subunit ... 76 1e-10
13emb|BX831835.1|CNS0A107 Arabidopsis thaliana Full-length cDNA Co... 74 6e-10
14gb|BT004034.1| Arabidopsis thaliana clone RAFL15-43-C20 (R20900)... 74 6e-10
15dbj|AK103987.1| Oryza sativa (japonica cultivar-group) cDNA clon... 70 9e-09
16dbj|AK102645.1| Oryza sativa (japonica cultivar-group) cDNA clon... 70 9e-09
17dbj|AK072851.1| Oryza sativa (japonica cultivar-group) cDNA clon... 70 9e-09
18dbj|AK068389.1| Oryza sativa (japonica cultivar-group) cDNA clon... 70 9e-09
19ref|NM_118776.2| Arabidopsis thaliana CSN6B AT4G26430 (CSN6B) mR... 64 6e-07
20gb|AF395064.1|AF395064 Arabidopsis thaliana CSN complex subunit ... 64 6e-07
21gb|AF434762.1|AF434762 Arabidopsis thaliana COP9 signalosome sub... 64 6e-07
22emb|BX826563.1|CNS0A38W Arabidopsis thaliana Full-length cDNA Co... 64 6e-07
23gb|AY087556.1| Arabidopsis thaliana clone 36616 mRNA, complete s... 64 6e-07
24gb|BT002345.1| Arabidopsis thaliana clone C104953 unknown protei... 64 6e-07
25dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 62 2e-06
26gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 62 2e-06
27emb|AL713945.5|CNS07YPO Oryza sativa chromosome 12, . BAC OJ1727... 62 2e-06
28emb|AL731891.2|CNS08C8V Oryza sativa chromosome 12, . BAC OJ1374... 62 2e-06
29dbj|AB026656.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 58 3e-05
30gb|AY080638.1| Arabidopsis thaliana unknown protein (At4g26430) ... 50 0.008
31gb|AE004753.1| Pseudomonas aeruginosa PAO1, section 314 of 529 o... 46 0.13
32gb|CP000148.1| Geobacter metallireducens GS-15, complete genome 44 0.52
33emb|CR760300.2| Xenopus tropicalis finished cDNA, clone TNeu117c08 44 0.52
34ref|XM_814443.1| Trypanosoma cruzi strain CL Brener mucin-associ... 44 0.52
35ref|NM_001006722.1| Xenopus tropicalis COP9 constitutive photomo... 44 0.52
36gb|AC147889.2| Xenopus tropicalis clone CH216-168F2, complete se... 44 0.52
37gb|BC075460.1| Xenopus tropicalis COP9 constitutive photomorphog... 44 0.52
38dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.52
39dbj|AP003241.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.52
40dbj|AK103342.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.52
41dbj|AK059601.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.52
42ref|NM_197254.1| Oryza sativa (japonica cultivar-group) hypothet... 42 2.0
43gb|AC084023.8| Oryza sativa (japonica cultivar-group) chromosome... 42 2.0
44emb|AL161565.2|ATCHRIV65 Arabidopsis thaliana DNA chromosome 4, ... 42 2.0
45emb|AL022223.3|ATM3E9 Arabidopsis thaliana DNA chromosome 4, P1 ... 42 2.0
46dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.0
47dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.0
48dbj|AP006860.2| Oryza sativa (japonica cultivar-group) genomic D... 42 2.0
49dbj|AP005761.2| Oryza sativa (japonica cultivar-group) genomic D... 42 2.0
50dbj|AK106674.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.0
51emb|AJ290962.1|CAR290962 Clytus arietis partial eIF2g gene exons... 42 2.0
52gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 42 2.0
53gb|AC108413.4| Mus musculus chromosome 8, clone RP23-472M11, com... 40 8.1
54ref|XM_476928.1| Oryza sativa (japonica cultivar-group), mRNA 40 8.1
55ref|XM_472498.1| Oryza sativa (japonica cultivar-group), predic... 40 8.1
56gb|AC137842.8| Mus musculus chromosome 15, clone RP23-91M6, comp... 40 8.1
57gb|AC022675.7| Mus musculus chromosome 1, clone RP23-59N15, comp... 40 8.1
58ref|NM_026546.1| Mus musculus RIKEN cDNA A930016P21 gene (A93001... 40 8.1
59ref|XM_424180.1| PREDICTED: Gallus gallus similar to kidney pred... 40 8.1
60gb|AC124614.11| Mus musculus chromosome 10, clone RP24-417L12, c... 40 8.1
61gb|BC030179.1| Mus musculus RIKEN cDNA A930016P21 gene, mRNA (cD... 40 8.1
62gb|AC125060.4| Mus musculus BAC clone RP23-406B22 from chromosom... 40 8.1
63ref|XM_538915.2| PREDICTED: Canis familiaris similar to fibrobla... 40 8.1
64gb|AC090582.9| Homo sapiens chromosome 11, clone RP11-125F14, co... 40 8.1
65emb|AL606632.5| Oryza sativa genomic DNA, chromosome 4, BAC clon... 40 8.1
66ref|XM_738735.1| Plasmodium chabaudi chabaudi hypothetical prote... 40 8.1
67gb|AC163225.4| Mus musculus chromosome 8, clone RP23-319L22, com... 40 8.1
68emb|AJ224904.1|AXY224904 Alcaligenes xylosoxidans subsp. denitri... 40 8.1
69gb|AC090559.7| Homo sapiens chromosome 11, clone RP11-750H9, com... 40 8.1
70dbj|AK160923.1| Mus musculus 18 days pregnant adult female place... 40 8.1
71dbj|AK003724.2| Mus musculus 18-day embryo whole body cDNA, RIKE... 40 8.1
72dbj|AK044518.1| Mus musculus adult retina cDNA, RIKEN full-lengt... 40 8.1
73dbj|AK020868.1| Mus musculus adult retina cDNA, RIKEN full-lengt... 40 8.1
74dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.1
75dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.1
76dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 8.1
77gb|AC160764.2| Ornithorhynchus anatinus BAC clone OABb-454A1 fro... 40 8.1
78dbj|AP005179.4| Oryza sativa (japonica cultivar-group) genomic D... 40 8.1
79dbj|AK103069.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.1
80dbj|AK070740.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.1
81dbj|AP004384.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.1
82gb|AF114788.1|AF114788 Paracoccus denitrificans copper dependent... 40 8.1
83dbj|AP003395.1| Homo sapiens genomic DNA, chromosome 11q clone:R... 40 8.1
84gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, com... 40 8.1
85gb|AY609656.1| Sus scrofa clone Clu_2389.scr.msk.p1.Contig3, mRN... 40 8.1
86emb|AL732377.4|CNS08C90 Oryza sativa chromosome 12, . BAC OSJNBa... 40 8.1
87emb|AL365314.16| Mouse DNA sequence from clone RP23-106N23 on ch... 40 8.1 
>ref|XM_483183.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1408

 Score =  307 bits (155), Expect = 2e-80
 Identities = 239/267 (89%)
 Strand = Plus / Plus

                                                                       
Query: 329 agccgccgagggtcttcgggtgcgtgatcggggtgcagcgcgggcggacggtcgagatcc 388
           ||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| 
Sbjct: 287 agccgccgagggtgttcgggtgcgtgatcggggtgcagcgcgggcggacggtggagatct 346

                                                                       
Query: 389 tcaacagcttcgagctcgtcctcgaccccgtcaccggcacgctcgagcgcgccttcctgg 448
           |||||||||||||||||||||||||||| ||| |||| || ||||| ||||||||||| |
Sbjct: 347 tcaacagcttcgagctcgtcctcgaccctgtctccgggaccctcgaccgcgccttcctcg 406

                                                                       
Query: 449 agaagaagcttgagctctataagaaggtgttccctgaattctatgtgctgggctggtact 508
           |||| ||||  ||||||||||||||||| ||||| || |||||||||||||| |||||||
Sbjct: 407 agaaaaagcaggagctctataagaaggttttccccgacttctatgtgctgggttggtact 466

                                                                       
Query: 509 caactggaagcgatgtgcaggatactgacatcctaatgcacaaggctctgatggacatta 568
           | |||||||||||||||| ||| ||||| || | ||| ||||||||||||||||||||||
Sbjct: 467 ccactggaagcgatgtgcgggacactgatatgcaaatccacaaggctctgatggacatta 526

                                      
Query: 569 atgaaagccctgtctatcttctcttga 595
           | ||||| || || |||||||| ||||
Sbjct: 527 acgaaagtcccgtttatcttcttttga 553



 Score =  153 bits (77), Expect = 8e-34
 Identities = 83/85 (97%)
 Strand = Plus / Plus

                                                                       
Query: 167 cctccagcagcggcctcaccttcaagctccaccccctcgtcatcgtgaacgtctccgacc 226
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 158 cctccagcagcggcctcaccttcaagctccaccccctcgtcatcgtgaacgtctccgacc 217

                                    
Query: 227 actacacccgcgtcaaggcccaggc 251
           || |||||||||| |||||||||||
Sbjct: 218 accacacccgcgtgaaggcccaggc 242
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>dbj|AK058215.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-010-D12, full
           insert sequence
          Length = 1408

 Score =  307 bits (155), Expect = 2e-80
 Identities = 239/267 (89%)
 Strand = Plus / Plus

                                                                       
Query: 329 agccgccgagggtcttcgggtgcgtgatcggggtgcagcgcgggcggacggtcgagatcc 388
           ||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| 
Sbjct: 287 agccgccgagggtgttcgggtgcgtgatcggggtgcagcgcgggcggacggtggagatct 346

                                                                       
Query: 389 tcaacagcttcgagctcgtcctcgaccccgtcaccggcacgctcgagcgcgccttcctgg 448
           |||||||||||||||||||||||||||| ||| |||| || ||||| ||||||||||| |
Sbjct: 347 tcaacagcttcgagctcgtcctcgaccctgtctccgggaccctcgaccgcgccttcctcg 406

                                                                       
Query: 449 agaagaagcttgagctctataagaaggtgttccctgaattctatgtgctgggctggtact 508
           |||| ||||  ||||||||||||||||| ||||| || |||||||||||||| |||||||
Sbjct: 407 agaaaaagcaggagctctataagaaggttttccccgacttctatgtgctgggttggtact 466

                                                                       
Query: 509 caactggaagcgatgtgcaggatactgacatcctaatgcacaaggctctgatggacatta 568
           | |||||||||||||||| ||| ||||| || | ||| ||||||||||||||||||||||
Sbjct: 467 ccactggaagcgatgtgcgggacactgatatgcaaatccacaaggctctgatggacatta 526

                                      
Query: 569 atgaaagccctgtctatcttctcttga 595
           | ||||| || || |||||||| ||||
Sbjct: 527 acgaaagtcccgtttatcttcttttga 553



 Score =  153 bits (77), Expect = 8e-34
 Identities = 83/85 (97%)
 Strand = Plus / Plus

                                                                       
Query: 167 cctccagcagcggcctcaccttcaagctccaccccctcgtcatcgtgaacgtctccgacc 226
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 158 cctccagcagcggcctcaccttcaagctccaccccctcgtcatcgtgaacgtctccgacc 217

                                    
Query: 227 actacacccgcgtcaaggcccaggc 251
           || |||||||||| |||||||||||
Sbjct: 218 accacacccgcgtgaaggcccaggc 242
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>emb|AM234671.1| Oryza sativa mRNA for COP9 signalosome subunit 6 (csn6 gene)
          Length = 1408

 Score =  307 bits (155), Expect = 2e-80
 Identities = 239/267 (89%)
 Strand = Plus / Plus

                                                                       
Query: 329 agccgccgagggtcttcgggtgcgtgatcggggtgcagcgcgggcggacggtcgagatcc 388
           ||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| 
Sbjct: 287 agccgccgagggtgttcgggtgcgtgatcggggtgcagcgcgggcggacggtggagatct 346

                                                                       
Query: 389 tcaacagcttcgagctcgtcctcgaccccgtcaccggcacgctcgagcgcgccttcctgg 448
           |||||||||||||||||||||||||||| ||| |||| || ||||| ||||||||||| |
Sbjct: 347 tcaacagcttcgagctcgtcctcgaccctgtctccgggaccctcgaccgcgccttcctcg 406

                                                                       
Query: 449 agaagaagcttgagctctataagaaggtgttccctgaattctatgtgctgggctggtact 508
           |||| ||||  ||||||||||||||||| ||||| || |||||||||||||| |||||||
Sbjct: 407 agaaaaagcaggagctctataagaaggttttccccgacttctatgtgctgggttggtact 466

                                                                       
Query: 509 caactggaagcgatgtgcaggatactgacatcctaatgcacaaggctctgatggacatta 568
           | |||||||||||||||| ||| ||||| || | ||| ||||||||||||||||||||||
Sbjct: 467 ccactggaagcgatgtgcgggacactgatatgcaaatccacaaggctctgatggacatta 526

                                      
Query: 569 atgaaagccctgtctatcttctcttga 595
           | ||||| || || |||||||| ||||
Sbjct: 527 acgaaagtcccgtttatcttcttttga 553



 Score =  153 bits (77), Expect = 8e-34
 Identities = 83/85 (97%)
 Strand = Plus / Plus

                                                                       
Query: 167 cctccagcagcggcctcaccttcaagctccaccccctcgtcatcgtgaacgtctccgacc 226
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 158 cctccagcagcggcctcaccttcaagctccaccccctcgtcatcgtgaacgtctccgacc 217

                                    
Query: 227 actacacccgcgtcaaggcccaggc 251
           || |||||||||| |||||||||||
Sbjct: 218 accacacccgcgtgaaggcccaggc 242
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>gb|BT017731.1| Zea mays clone EL01N0448B12.c mRNA sequence
          Length = 1383

 Score =  260 bits (131), Expect = 5e-66
 Identities = 227/259 (87%)
 Strand = Plus / Plus

                                                                       
Query: 329 agccgccgagggtcttcgggtgcgtgatcggggtgcagcgcgggcggacggtcgagatcc 388
           ||||||||||||| ||||||||||||||||||||||||||||| ||||| || |||||| 
Sbjct: 274 agccgccgagggtgttcgggtgcgtgatcggggtgcagcgcggccggaccgtggagatct 333

                                                                       
Query: 389 tcaacagcttcgagctcgtcctcgaccccgtcaccggcacgctcgagcgcgccttcctgg 448
           ||||||||||||||||||| |||||||||||| |||| || ||||| ||||||||||| |
Sbjct: 334 tcaacagcttcgagctcgtgctcgaccccgtctccggaaccctcgaccgcgccttcctcg 393

                                                                       
Query: 449 agaagaagcttgagctctataagaaggtgttccctgaattctatgtgctgggctggtact 508
           | |||||||  ||||||||||||||||||||||| || ||||| ||||| || |||||||
Sbjct: 394 acaagaagcaggagctctataagaaggtgttccccgacttctacgtgctcggttggtact 453

                                                                       
Query: 509 caactggaagcgatgtgcaggatactgacatcctaatgcacaaggctctgatggacatta 568
           | ||||||||||||||||| || || ||||| ||||| |||||  |  ||||||| ||||
Sbjct: 454 ccactggaagcgatgtgcacgacaccgacatgctaatccacaaatcattgatggatatta 513

                              
Query: 569 atgaaagccctgtctatct 587
           | ||||||||||| |||||
Sbjct: 514 acgaaagccctgtttatct 532



 Score =  139 bits (70), Expect = 1e-29
 Identities = 91/98 (92%)
 Strand = Plus / Plus

                                                                       
Query: 155 ccaccgcggccacctccagcagcggcctcaccttcaagctccaccccctcgtcatcgtga 214
           ||||||| ||| |||||||| | || |||||||||||||||||||| |||||||||||||
Sbjct: 124 ccaccgccgccgcctccagcggtgggctcaccttcaagctccacccgctcgtcatcgtga 183

                                                 
Query: 215 acgtctccgaccactacacccgcgtcaaggcccaggcc 252
           |||||||||||||| |||||||||||||||||||||||
Sbjct: 184 acgtctccgaccaccacacccgcgtcaaggcccaggcc 221
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>gb|AY104920.1| Zea mays PCO100740 mRNA sequence
          Length = 1562

 Score =  260 bits (131), Expect = 5e-66
 Identities = 227/259 (87%)
 Strand = Plus / Plus

                                                                       
Query: 329 agccgccgagggtcttcgggtgcgtgatcggggtgcagcgcgggcggacggtcgagatcc 388
           ||||||||||||| ||||||||||||||||||||||||||||| ||||| || |||||| 
Sbjct: 354 agccgccgagggtgttcgggtgcgtgatcggggtgcagcgcggccggaccgtggagatct 413

                                                                       
Query: 389 tcaacagcttcgagctcgtcctcgaccccgtcaccggcacgctcgagcgcgccttcctgg 448
           ||||||||||||||||||| |||||||||||| |||| || ||||| ||||||||||| |
Sbjct: 414 tcaacagcttcgagctcgtgctcgaccccgtctccggaaccctcgaccgcgccttcctcg 473

                                                                       
Query: 449 agaagaagcttgagctctataagaaggtgttccctgaattctatgtgctgggctggtact 508
           | |||||||  ||||||||||||||||||||||| || ||||| ||||| || |||||||
Sbjct: 474 acaagaagcaggagctctataagaaggtgttccccgacttctacgtgctcggttggtact 533

                                                                       
Query: 509 caactggaagcgatgtgcaggatactgacatcctaatgcacaaggctctgatggacatta 568
           | ||||||||||||||||| || || ||||| ||||| |||||  |  ||||||| ||||
Sbjct: 534 ccactggaagcgatgtgcacgacaccgacatgctaatccacaaatcattgatggatatta 593

                              
Query: 569 atgaaagccctgtctatct 587
           | ||||||||||| |||||
Sbjct: 594 acgaaagccctgtttatct 612



 Score =  139 bits (70), Expect = 1e-29
 Identities = 91/98 (92%)
 Strand = Plus / Plus

                                                                       
Query: 155 ccaccgcggccacctccagcagcggcctcaccttcaagctccaccccctcgtcatcgtga 214
           ||||||| ||| |||||||| | || |||||||||||||||||||| |||||||||||||
Sbjct: 204 ccaccgccgccgcctccagcggtgggctcaccttcaagctccacccgctcgtcatcgtga 263

                                                 
Query: 215 acgtctccgaccactacacccgcgtcaaggcccaggcc 252
           |||||||||||||| |||||||||||||||||||||||
Sbjct: 264 acgtctccgaccaccacacccgcgtcaaggcccaggcc 301
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>gb|AF072848.1|AF072848 Oryza sativa Mov34 homolog mRNA, partial cds
          Length = 497

 Score =  246 bits (124), Expect = 7e-62
 Identities = 188/208 (90%), Gaps = 1/208 (0%)
 Strand = Plus / Plus

                                                                       
Query: 329 agccgccgagggtcttcgggtgcgtgatcggggtgcagcgcgggcggacggtcgagatcc 388
           ||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| 
Sbjct: 276 agccgccgagggtgttcgggtgcgtgatcggggtgcagcgcgggcggacggtggagatct 335

                                                                       
Query: 389 tcaacagcttcgagctcgtcctcgaccccgtcaccggcacgctcgagcgcgccttcctgg 448
           |||||||||||||||||||||||||||| ||| |||| || ||||| |||||||| || |
Sbjct: 336 tcaacagcttcgagctcgtcctcgaccctgtctccgggaccctcgaccgcgcctt-ctcg 394

                                                                       
Query: 449 agaagaagcttgagctctataagaaggtgttccctgaattctatgtgctgggctggtact 508
           |||| ||||  ||||||||||||||||| ||||| || |||||||||||||| |||||||
Sbjct: 395 agaaaaagcaggagctctataagaaggttttccccgacttctatgtgctgggttggtact 454

                                       
Query: 509 caactggaagcgatgtgcaggatactga 536
           | |||||||||||||||| ||| |||||
Sbjct: 455 ccactggaagcgatgtgcgggacactga 482



 Score =  153 bits (77), Expect = 8e-34
 Identities = 83/85 (97%)
 Strand = Plus / Plus

                                                                       
Query: 167 cctccagcagcggcctcaccttcaagctccaccccctcgtcatcgtgaacgtctccgacc 226
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 146 cctccagcagcggcctcaccttcaagctccaccccctcgtcatcgtgaacgtctccgacc 205

                                    
Query: 227 actacacccgcgtcaaggcccaggc 251
           || |||||||||| |||||||||||
Sbjct: 206 accacacccgcgtgaaggcccaggc 230
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score =  178 bits (90), Expect = 1e-41
 Identities = 126/138 (91%)
 Strand = Plus / Minus

                                                                            
Query: 329      agccgccgagggtcttcgggtgcgtgatcggggtgcagcgcgggcggacggtcgagatcc 388
                ||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| 
Sbjct: 24677001 agccgccgagggtgttcgggtgcgtgatcggggtgcagcgcgggcggacggtggagatct 24676942

                                                                            
Query: 389      tcaacagcttcgagctcgtcctcgaccccgtcaccggcacgctcgagcgcgccttcctgg 448
                |||||||||||||||||||||||||||| ||| |||| || ||||| ||||||||||| |
Sbjct: 24676941 tcaacagcttcgagctcgtcctcgaccctgtctccgggaccctcgaccgcgccttcctcg 24676882

                                  
Query: 449      agaagaagcttgagctct 466
                |||| ||||  |||||||
Sbjct: 24676881 agaaaaagcaggagctct 24676864



 Score =  153 bits (77), Expect = 8e-34
 Identities = 83/85 (97%)
 Strand = Plus / Minus

                                                                            
Query: 167      cctccagcagcggcctcaccttcaagctccaccccctcgtcatcgtgaacgtctccgacc 226
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24677130 cctccagcagcggcctcaccttcaagctccaccccctcgtcatcgtgaacgtctccgacc 24677071

                                         
Query: 227      actacacccgcgtcaaggcccaggc 251
                || |||||||||| |||||||||||
Sbjct: 24677070 accacacccgcgtgaaggcccaggc 24677046



 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 78/89 (87%)
 Strand = Plus / Minus

                                                                            
Query: 467      ataagaaggtgttccctgaattctatgtgctgggctggtactcaactggaagcgatgtgc 526
                |||||||||| ||||| || |||||||||||||| |||||||| ||||||||||||||||
Sbjct: 24676762 ataagaaggttttccccgacttctatgtgctgggttggtactccactggaagcgatgtgc 24676703

                                             
Query: 527      aggatactgacatcctaatgcacaaggct 555
                 ||| ||||| || | ||| |||||||||
Sbjct: 24676702 gggacactgatatgcaaatccacaaggct 24676674



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                        
Query: 556      ctgatggacattaatgaaagccctgtctatcttctcttga 595
                |||||||||||||| ||||| || || |||||||| ||||
Sbjct: 24675950 ctgatggacattaacgaaagtcccgtttatcttcttttga 24675911
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>dbj|AP003873.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1118_A06
          Length = 92836

 Score =  178 bits (90), Expect = 1e-41
 Identities = 126/138 (91%)
 Strand = Plus / Minus

                                                                         
Query: 329   agccgccgagggtcttcgggtgcgtgatcggggtgcagcgcgggcggacggtcgagatcc 388
             ||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| 
Sbjct: 49305 agccgccgagggtgttcgggtgcgtgatcggggtgcagcgcgggcggacggtggagatct 49246

                                                                         
Query: 389   tcaacagcttcgagctcgtcctcgaccccgtcaccggcacgctcgagcgcgccttcctgg 448
             |||||||||||||||||||||||||||| ||| |||| || ||||| ||||||||||| |
Sbjct: 49245 tcaacagcttcgagctcgtcctcgaccctgtctccgggaccctcgaccgcgccttcctcg 49186

                               
Query: 449   agaagaagcttgagctct 466
             |||| ||||  |||||||
Sbjct: 49185 agaaaaagcaggagctct 49168



 Score =  153 bits (77), Expect = 8e-34
 Identities = 83/85 (97%)
 Strand = Plus / Minus

                                                                         
Query: 167   cctccagcagcggcctcaccttcaagctccaccccctcgtcatcgtgaacgtctccgacc 226
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 49434 cctccagcagcggcctcaccttcaagctccaccccctcgtcatcgtgaacgtctccgacc 49375

                                      
Query: 227   actacacccgcgtcaaggcccaggc 251
             || |||||||||| |||||||||||
Sbjct: 49374 accacacccgcgtgaaggcccaggc 49350



 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 78/89 (87%)
 Strand = Plus / Minus

                                                                         
Query: 467   ataagaaggtgttccctgaattctatgtgctgggctggtactcaactggaagcgatgtgc 526
             |||||||||| ||||| || |||||||||||||| |||||||| ||||||||||||||||
Sbjct: 49066 ataagaaggttttccccgacttctatgtgctgggttggtactccactggaagcgatgtgc 49007

                                          
Query: 527   aggatactgacatcctaatgcacaaggct 555
              ||| ||||| || | ||| |||||||||
Sbjct: 49006 gggacactgatatgcaaatccacaaggct 48978



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                     
Query: 556   ctgatggacattaatgaaagccctgtctatcttctcttga 595
             |||||||||||||| ||||| || || |||||||| ||||
Sbjct: 48254 ctgatggacattaacgaaagtcccgtttatcttcttttga 48215
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>ref|NM_125011.2| Arabidopsis thaliana CSN6A AT5G56280 (CSN6A) mRNA, complete cds
          Length = 1216

 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 72/82 (87%)
 Strand = Plus / Plus

                                                                       
Query: 442 ttcctggagaagaagcttgagctctataagaaggtgttccctgaattctatgtgctgggc 501
           ||||| ||||||||||  |||||||||||||||||||||||||| |||||| | ||||| 
Sbjct: 303 ttcctcgagaagaagcaagagctctataagaaggtgttccctgatttctatattctggga 362

                                 
Query: 502 tggtactcaactggaagcgatg 523
           |||||||| || ||||| ||||
Sbjct: 363 tggtactctacgggaagtgatg 384
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>gb|AY048692.1| Arabidopsis thaliana COP9 complex subunit 6 mRNA, complete cds
          Length = 1250

 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 72/82 (87%)
 Strand = Plus / Plus

                                                                       
Query: 442 ttcctggagaagaagcttgagctctataagaaggtgttccctgaattctatgtgctgggc 501
           ||||| ||||||||||  |||||||||||||||||||||||||| |||||| | ||||| 
Sbjct: 315 ttcctcgagaagaagcaagagctctataagaaggtgttccctgatttctatattctggga 374

                                 
Query: 502 tggtactcaactggaagcgatg 523
           |||||||| || ||||| ||||
Sbjct: 375 tggtactctacgggaagtgatg 396
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>emb|BX832027.1|CNS09YTR Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH47ZC11 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1041

 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 72/82 (87%)
 Strand = Plus / Plus

                                                                       
Query: 442 ttcctggagaagaagcttgagctctataagaaggtgttccctgaattctatgtgctgggc 501
           ||||| ||||||||||  |||||||||||||||||||||||||| |||||| | ||||| 
Sbjct: 144 ttcctcgagaagaagcaagagctctataagaaggtgttccctgatttctatattctggga 203

                                 
Query: 502 tggtactcaactggaagcgatg 523
           |||||||| || ||||| ||||
Sbjct: 204 tggtactctacgggaagtgatg 225
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>gb|AF395063.1|AF395063 Arabidopsis thaliana CSN complex subunit 6A (CSN6A) mRNA, complete
           cds
          Length = 962

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 71/82 (86%)
 Strand = Plus / Plus

                                                                       
Query: 442 ttcctggagaagaagcttgagctctataagaaggtgttccctgaattctatgtgctgggc 501
           ||||| ||| ||||||  |||||||||||||||||||||||||| |||||| | ||||| 
Sbjct: 274 ttcctcgaggagaagcaagagctctataagaaggtgttccctgatttctatattctggga 333

                                 
Query: 502 tggtactcaactggaagcgatg 523
           |||||||| || ||||| ||||
Sbjct: 334 tggtactctacgggaagtgatg 355
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>emb|BX831835.1|CNS0A107 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH32ZC09 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1119

 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 67/77 (87%)
 Strand = Plus / Plus

                                                                       
Query: 442 ttcctggagaagaagcttgagctctataagaaggtgttccctgaattctatgtgctgggc 501
           ||||| ||||||||||  || ||||||||||||||||||||||| |||||| | ||||| 
Sbjct: 305 ttcctcgagaagaagcaagatctctataagaaggtgttccctgatttctatattctggga 364

                            
Query: 502 tggtactcaactggaag 518
           |||||||| || |||||
Sbjct: 365 tggtactctacgggaag 381
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>gb|BT004034.1| Arabidopsis thaliana clone RAFL15-43-C20 (R20900) putative COP9
           complex subunit 6 CSN6 (At5g56280) mRNA, partial cds
          Length = 906

 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 64/73 (87%)
 Strand = Plus / Plus

                                                                       
Query: 451 aagaagcttgagctctataagaaggtgttccctgaattctatgtgctgggctggtactca 510
           |||||||  |||||||||||||||||||||||||| |||||| | ||||| |||||||| 
Sbjct: 1   aagaagcaagagctctataagaaggtgttccctgatttctatattctgggatggtactct 60

                        
Query: 511 actggaagcgatg 523
           || ||||| ||||
Sbjct: 61  acgggaagtgatg 73
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>dbj|AK103987.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-017-H11, full
           insert sequence
          Length = 1773

 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 113/139 (81%)
 Strand = Plus / Plus

                                                                       
Query: 346 gggtgcgtgatcggggtgcagcgcgggcggacggtcgagatcctcaacagcttcgagctc 405
           |||||||||||||||||||||||||| |||||||| ||| || || ||| || |||  ||
Sbjct: 333 gggtgcgtgatcggggtgcagcgcggtcggacggtggaggtcgtcgacacctccgacatc 392

                                                                       
Query: 406 gtcctcgaccccgtcaccggcacgctcgagcgcgccttcctggagaagaagcttgagctc 465
            | |||||| ||| | |||| || ||||| |||| |||  || |||||||||| |||  |
Sbjct: 393 ttgctcgacaccgaccccggaaccctcgaccgcgacttgttgaagaagaagctcgagacc 452

                              
Query: 466 tataagaaggtgttccctg 484
           || ||||||| ||||||||
Sbjct: 453 tacaagaaggcgttccctg 471
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>dbj|AK102645.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033100G22, full
           insert sequence
          Length = 1644

 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 113/139 (81%)
 Strand = Plus / Plus

                                                                       
Query: 346 gggtgcgtgatcggggtgcagcgcgggcggacggtcgagatcctcaacagcttcgagctc 405
           |||||||||||||||||||||||||| |||||||| ||| || || ||| || |||  ||
Sbjct: 337 gggtgcgtgatcggggtgcagcgcggtcggacggtggaggtcgtcgacacctccgacatc 396

                                                                       
Query: 406 gtcctcgaccccgtcaccggcacgctcgagcgcgccttcctggagaagaagcttgagctc 465
            | |||||| ||| | |||| || ||||| |||| |||  || |||||||||| |||  |
Sbjct: 397 ttgctcgacaccgaccccggaaccctcgaccgcgacttgttgaagaagaagctcgagacc 456

                              
Query: 466 tataagaaggtgttccctg 484
           || ||||||| ||||||||
Sbjct: 457 tacaagaaggcgttccctg 475
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>dbj|AK072851.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023135N05, full
           insert sequence
          Length = 1782

 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 113/139 (81%)
 Strand = Plus / Plus

                                                                       
Query: 346 gggtgcgtgatcggggtgcagcgcgggcggacggtcgagatcctcaacagcttcgagctc 405
           |||||||||||||||||||||||||| |||||||| ||| || || ||| || |||  ||
Sbjct: 376 gggtgcgtgatcggggtgcagcgcggtcggacggtggaggtcgtcgacacctccgacatc 435

                                                                       
Query: 406 gtcctcgaccccgtcaccggcacgctcgagcgcgccttcctggagaagaagcttgagctc 465
            | |||||| ||| | |||| || ||||| |||| |||  || |||||||||| |||  |
Sbjct: 436 ttgctcgacaccgaccccggaaccctcgaccgcgacttgttgaagaagaagctcgagacc 495

                              
Query: 466 tataagaaggtgttccctg 484
           || ||||||| ||||||||
Sbjct: 496 tacaagaaggcgttccctg 514
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>dbj|AK068389.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013146P10, full
           insert sequence
          Length = 2207

 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 113/139 (81%)
 Strand = Plus / Plus

                                                                       
Query: 346 gggtgcgtgatcggggtgcagcgcgggcggacggtcgagatcctcaacagcttcgagctc 405
           |||||||||||||||||||||||||| |||||||| ||| || || ||| || |||  ||
Sbjct: 767 gggtgcgtgatcggggtgcagcgcggtcggacggtggaggtcgtcgacacctccgacatc 826

                                                                       
Query: 406 gtcctcgaccccgtcaccggcacgctcgagcgcgccttcctggagaagaagcttgagctc 465
            | |||||| ||| | |||| || ||||| |||| |||  || |||||||||| |||  |
Sbjct: 827 ttgctcgacaccgaccccggaaccctcgaccgcgacttgttgaagaagaagctcgagacc 886

                              
Query: 466 tataagaaggtgttccctg 484
           || ||||||| ||||||||
Sbjct: 887 tacaagaaggcgttccctg 905
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>ref|NM_118776.2| Arabidopsis thaliana CSN6B AT4G26430 (CSN6B) mRNA, complete cds
          Length = 1467

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 47/52 (90%)
 Strand = Plus / Plus

                                                               
Query: 440 ccttcctggagaagaagcttgagctctataagaaggtgttccctgaattcta 491
           ||||||| ||||||||||  || ||||||||||||||||||||||| |||||
Sbjct: 509 ccttcctcgagaagaagcaagaactctataagaaggtgttccctgacttcta 560



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 547 cacaaggctctgatggacattaatgaa 573
           ||||| |||||||||||||||||||||
Sbjct: 616 cacaaagctctgatggacattaatgaa 642
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>gb|AF395064.1|AF395064 Arabidopsis thaliana CSN complex subunit 6B (CSN6B) mRNA, complete
           cds
          Length = 966

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 47/52 (90%)
 Strand = Plus / Plus

                                                               
Query: 440 ccttcctggagaagaagcttgagctctataagaaggtgttccctgaattcta 491
           ||||||| ||||||||||  || ||||||||||||||||||||||| |||||
Sbjct: 272 ccttcctcgagaagaagcaagaactctataagaaggtgttccctgacttcta 323



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 547 cacaaggctctgatggacattaatgaa 573
           ||||| |||||||||||||||||||||
Sbjct: 379 cacaaagctctgatggacattaatgaa 405
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>gb|AF434762.1|AF434762 Arabidopsis thaliana COP9 signalosome subunit 6 (CSN6B) mRNA,
           complete cds
          Length = 1208

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 47/52 (90%)
 Strand = Plus / Plus

                                                               
Query: 440 ccttcctggagaagaagcttgagctctataagaaggtgttccctgaattcta 491
           ||||||| ||||||||||  || ||||||||||||||||||||||| |||||
Sbjct: 509 ccttcctcgagaagaagcaagaactctataagaaggtgttccctgacttcta 560



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 547 cacaaggctctgatggacattaatgaa 573
           ||||| |||||||||||||||||||||
Sbjct: 616 cacaaagctctgatggacattaatgaa 642
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>emb|BX826563.1|CNS0A38W Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB40ZG04 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1186

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 47/52 (90%)
 Strand = Plus / Plus

                                                               
Query: 440 ccttcctggagaagaagcttgagctctataagaaggtgttccctgaattcta 491
           ||||||| ||||||||||  || ||||||||||||||||||||||| |||||
Sbjct: 307 ccttcctcgagaagaagcaagaactctataagaaggtgttccctgacttcta 358



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 547 cacaaggctctgatggacattaatgaa 573
           ||||| |||||||||||||||||||||
Sbjct: 414 cacaaagctctgatggacattaatgaa 440
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>gb|AY087556.1| Arabidopsis thaliana clone 36616 mRNA, complete sequence
          Length = 1194

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 47/52 (90%)
 Strand = Plus / Plus

                                                               
Query: 440 ccttcctggagaagaagcttgagctctataagaaggtgttccctgaattcta 491
           ||||||| ||||||||||  || ||||||||||||||||||||||| |||||
Sbjct: 279 ccttcctcgagaagaagcaagaactctataagaaggtgttccctgacttcta 330



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 547 cacaaggctctgatggacattaatgaa 573
           ||||| |||||||||||||||||||||
Sbjct: 386 cacaaagctctgatggacattaatgaa 412
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>gb|BT002345.1| Arabidopsis thaliana clone C104953 unknown protein (At4g26430)
           mRNA, complete cds
          Length = 985

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 47/52 (90%)
 Strand = Plus / Plus

                                                               
Query: 440 ccttcctggagaagaagcttgagctctataagaaggtgttccctgaattcta 491
           ||||||| ||||||||||  || ||||||||||||||||||||||| |||||
Sbjct: 272 ccttcctcgagaagaagcaagaactctataagaaggtgttccctgacttcta 323



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 547 cacaaggctctgatggacattaatgaa 573
           ||||| |||||||||||||||||||||
Sbjct: 379 cacaaagctctgatggacattaatgaa 405
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 34/35 (97%)
 Strand = Plus / Plus

                                                   
Query: 346      gggtgcgtgatcggggtgcagcgcgggcggacggt 380
                |||||||||||||||||||||||||| ||||||||
Sbjct: 26585321 gggtgcgtgatcggggtgcagcgcggtcggacggt 26585355



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 181      ctcaccttcaagctccaccccctcg 205
                |||||||||| ||||||||||||||
Sbjct: 26633416 ctcaccttcaggctccaccccctcg 26633440



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                            
Query: 408      cctcgaccccgtcaccggcacgctcgag 435
                ||||||| ||||| ||||||||||||||
Sbjct: 20777746 cctcgacgccgtcgccggcacgctcgag 20777773
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 34/35 (97%)
 Strand = Plus / Plus

                                                   
Query: 346      gggtgcgtgatcggggtgcagcgcgggcggacggt 380
                |||||||||||||||||||||||||| ||||||||
Sbjct: 26513490 gggtgcgtgatcggggtgcagcgcggtcggacggt 26513524



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 181      ctcaccttcaagctccaccccctcg 205
                |||||||||| ||||||||||||||
Sbjct: 26561585 ctcaccttcaggctccaccccctcg 26561609



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                            
Query: 408      cctcgaccccgtcaccggcacgctcgag 435
                ||||||| ||||| ||||||||||||||
Sbjct: 20703960 cctcgacgccgtcgccggcacgctcgag 20703987
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>emb|AL713945.5|CNS07YPO Oryza sativa chromosome 12, . BAC OJ1727_H11 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 85710

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 34/35 (97%)
 Strand = Plus / Plus

                                                
Query: 346   gggtgcgtgatcggggtgcagcgcgggcggacggt 380
             |||||||||||||||||||||||||| ||||||||
Sbjct: 55326 gggtgcgtgatcggggtgcagcgcggtcggacggt 55360
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>emb|AL731891.2|CNS08C8V Oryza sativa chromosome 12, . BAC OJ1374_A04 of library Monsanto from
            chromosome 12 of cultivar Nipponbare of ssp. japonica of
            Oryza sativa (rice), complete sequence
          Length = 101173

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 34/35 (97%)
 Strand = Plus / Plus

                                               
Query: 346  gggtgcgtgatcggggtgcagcgcgggcggacggt 380
            |||||||||||||||||||||||||| ||||||||
Sbjct: 4191 gggtgcgtgatcggggtgcagcgcggtcggacggt 4225



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 181   ctcaccttcaagctccaccccctcg 205
             |||||||||| ||||||||||||||
Sbjct: 52286 ctcaccttcaggctccaccccctcg 52310
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>dbj|AB026656.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MXK23
          Length = 9670

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 50/57 (87%)
 Strand = Plus / Minus

                                                                     
Query: 467  ataagaaggtgttccctgaattctatgtgctgggctggtactcaactggaagcgatg 523
            ||||||||||||||||||| |||||| | ||||| |||||||| || ||||| ||||
Sbjct: 7932 ataagaaggtgttccctgatttctatattctgggatggtactctacgggaagtgatg 7876
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>gb|AY080638.1| Arabidopsis thaliana unknown protein (At4g26430) mRNA, partial cds
          Length = 965

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                        
Query: 463 ctctataagaaggtgttccctgaattcta 491
           ||||||||||||||||||||||| |||||
Sbjct: 13  ctctataagaaggtgttccctgacttcta 41



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 547 cacaaggctctgatggacattaatgaa 573
           ||||| |||||||||||||||||||||
Sbjct: 97  cacaaagctctgatggacattaatgaa 123
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>gb|AE004753.1| Pseudomonas aeruginosa PAO1, section 314 of 529 of the complete genome
          Length = 16268

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 155   ccaccgcggccacctccagcagcggcc 181
             |||||||||||||| ||||||||||||
Sbjct: 15461 ccaccgcggccaccaccagcagcggcc 15435
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>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome
          Length = 3997420

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                            
Query: 147    gcccccctccaccgcggccacctccagcag 176
              |||||||||||| |||||||||||| ||||
Sbjct: 290382 gcccccctccacggcggccacctcccgcag 290411
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>emb|CR760300.2| Xenopus tropicalis finished cDNA, clone TNeu117c08
          Length = 1364

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 192 gctccaccccctcgtcatcgtgaacgtctccgaccact 229
           |||||| |||||||||||| ||||| ||||||| ||||
Sbjct: 105 gctccatcccctcgtcatcttgaacatctccgatcact 142
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>ref|XM_814443.1| Trypanosoma cruzi strain CL Brener mucin-associated surface protein
           (MASP) (Tc00.1047053510625.150) partial mRNA
          Length = 912

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 152 cctccaccgcggccacctccagcagc 177
           ||||||||||||||||| ||||||||
Sbjct: 356 cctccaccgcggccaccaccagcagc 331
to top
>ref|NM_001006722.1| Xenopus tropicalis COP9 constitutive photomorphogenic homolog
           subunit 6 (Arabidopsis) (cops6), mRNA
          Length = 1406

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 192 gctccaccccctcgtcatcgtgaacgtctccgaccact 229
           |||||| |||||||||||| ||||| ||||||| ||||
Sbjct: 137 gctccatcccctcgtcatcttgaacatctccgatcact 174
to top
>gb|AC147889.2| Xenopus tropicalis clone CH216-168F2, complete sequence
          Length = 150457

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                   
Query: 192   gctccaccccctcgtcatcgtgaacgtctccgaccact 229
             |||||| |||||||||||| ||||| ||||||| ||||
Sbjct: 84919 gctccatcccctcgtcatcttgaacatctccgatcact 84882
to top
>gb|BC075460.1| Xenopus tropicalis COP9 constitutive photomorphogenic homolog
           subunit 6 (Arabidopsis), mRNA (cDNA clone MGC:89257
           IMAGE:6976482), complete cds
          Length = 1406

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 192 gctccaccccctcgtcatcgtgaacgtctccgaccact 229
           |||||| |||||||||||| ||||| ||||||| ||||
Sbjct: 137 gctccatcccctcgtcatcttgaacatctccgatcact 174
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 34       ctcgccgtcgctgtctcccatc 55
                ||||||||||||||||||||||
Sbjct: 36088217 ctcgccgtcgctgtctcccatc 36088238
to top
>dbj|AP003241.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0408C03
          Length = 141273

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 34     ctcgccgtcgctgtctcccatc 55
              ||||||||||||||||||||||
Sbjct: 100942 ctcgccgtcgctgtctcccatc 100963
to top
>dbj|AK103342.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033126C16,
          full insert sequence
          Length = 1270

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 34 ctcgccgtcgctgtctcccatc 55
          ||||||||||||||||||||||
Sbjct: 62 ctcgccgtcgctgtctcccatc 83
to top
>dbj|AK059601.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-030-E07,
          full insert sequence
          Length = 1277

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 34 ctcgccgtcgctgtctcccatc 55
          ||||||||||||||||||||||
Sbjct: 10 ctcgccgtcgctgtctcccatc 31
to top
>ref|NM_197254.1| Oryza sativa (japonica cultivar-group) hypothetical protein
           (OSJNBa0062C05.28), mRNA
          Length = 399

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 181 ctcaccttcaagctccaccccctcg 205
           |||||||||| ||||||||||||||
Sbjct: 46  ctcaccttcaggctccaccccctcg 70
to top
>gb|AC084023.8| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0062C05
              map S21174S, complete sequence
          Length = 178867

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 181    ctcaccttcaagctccaccccctcg 205
              |||||||||| ||||||||||||||
Sbjct: 142691 ctcaccttcaggctccaccccctcg 142715
to top
>emb|AL161565.2|ATCHRIV65 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 65
          Length = 198320

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 467   ataagaaggtgttccctgaattcta 491
             ||||||||||||||||||| |||||
Sbjct: 52784 ataagaaggtgttccctgacttcta 52808
to top
>emb|AL022223.3|ATM3E9 Arabidopsis thaliana DNA chromosome 4, P1 clone M3E9 (ESSA project)
          Length = 80677

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 467   ataagaaggtgttccctgaattcta 491
             ||||||||||||||||||| |||||
Sbjct: 53624 ataagaaggtgttccctgacttcta 53600
to top
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 181      ctcaccttcaagctccaccccctcg 205
                |||||||||| ||||||||||||||
Sbjct: 18844955 ctcaccttcaggctccaccccctcg 18844979
to top
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                             
Query: 152      cctccaccgcggccacctccagcagcggc 180
                ||||||||||||| ||||| |||||||||
Sbjct: 10542116 cctccaccgcggcgacctcaagcagcggc 10542144
to top
>dbj|AP006860.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:B1026E06
          Length = 162784

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 152    cctccaccgcggccacctccagcagcggc 180
              ||||||||||||| ||||| |||||||||
Sbjct: 118730 cctccaccgcggcgacctcaagcagcggc 118758
to top
>dbj|AP005761.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:B1066D09
          Length = 183999

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 152   cctccaccgcggccacctccagcagcggc 180
             ||||||||||||| ||||| |||||||||
Sbjct: 78823 cctccaccgcggcgacctcaagcagcggc 78851
to top
>dbj|AK106674.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-114-A05, full
           insert sequence
          Length = 1645

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 181 ctcaccttcaagctccaccccctcg 205
           |||||||||| ||||||||||||||
Sbjct: 105 ctcaccttcaggctccaccccctcg 129
to top
>emb|AJ290962.1|CAR290962 Clytus arietis partial eIF2g gene exons 3-6 and partial Su(var)3-9
            gene exons 4-7
          Length = 1880

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 561  ggacattaatgaaagccctgt 581
            |||||||||||||||||||||
Sbjct: 1851 ggacattaatgaaagccctgt 1871
to top
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 181      ctcaccttcaagctccaccccctcg 205
                |||||||||| ||||||||||||||
Sbjct: 18856209 ctcaccttcaggctccaccccctcg 18856233
to top
>gb|AC108413.4| Mus musculus chromosome 8, clone RP23-472M11, complete sequence
          Length = 174540

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 500   gctggtactcaactggaagc 519
             ||||||||||||||||||||
Sbjct: 48082 gctggtactcaactggaagc 48063
to top
>ref|XM_476928.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1393

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 425 gcacgctcgagcgcgccttc 444
           ||||||||||||||||||||
Sbjct: 210 gcacgctcgagcgcgccttc 229
to top
>ref|XM_472498.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1242

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 359 gggtgcagcgcgggcggacg 378
           ||||||||||||||||||||
Sbjct: 193 gggtgcagcgcgggcggacg 174
to top
>gb|AC137842.8| Mus musculus chromosome 15, clone RP23-91M6, complete sequence
          Length = 230609

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 445    ctggagaagaagcttgagct 464
              ||||||||||||||||||||
Sbjct: 115797 ctggagaagaagcttgagct 115778
to top
>gb|AC022675.7| Mus musculus chromosome 1, clone RP23-59N15, complete sequence
          Length = 181063

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 500   gctggtactcaactggaagc 519
             ||||||||||||||||||||
Sbjct: 87978 gctggtactcaactggaagc 87959
to top
>ref|NM_026546.1| Mus musculus RIKEN cDNA A930016P21 gene (A930016P21Rik), mRNA
          Length = 1167

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 445 ctggagaagaagcttgagct 464
           ||||||||||||||||||||
Sbjct: 511 ctggagaagaagcttgagct 530
to top
>ref|XM_424180.1| PREDICTED: Gallus gallus similar to kidney predominant protein
           NCU-G1 (LOC426541), partial mRNA
          Length = 954

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 152 cctccaccgcggccacctccagca 175
           ||||||||| ||||||||||||||
Sbjct: 355 cctccaccgtggccacctccagca 332
to top
>gb|AC124614.11| Mus musculus chromosome 10, clone RP24-417L12, complete sequence
          Length = 173306

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 500   gctggtactcaactggaagc 519
             ||||||||||||||||||||
Sbjct: 47753 gctggtactcaactggaagc 47734
to top
>gb|BC030179.1| Mus musculus RIKEN cDNA A930016P21 gene, mRNA (cDNA clone MGC:29360
           IMAGE:5039149), complete cds
          Length = 1162

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 445 ctggagaagaagcttgagct 464
           ||||||||||||||||||||
Sbjct: 502 ctggagaagaagcttgagct 521
to top
>gb|AC125060.4| Mus musculus BAC clone RP23-406B22 from chromosome 10, complete
             sequence
          Length = 178936

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 500   gctggtactcaactggaagc 519
             ||||||||||||||||||||
Sbjct: 24326 gctggtactcaactggaagc 24345
to top
>ref|XM_538915.2| PREDICTED: Canis familiaris similar to fibroblast growth factor
           receptor substrate 3 (LOC481794), mRNA
          Length = 1735

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 191 agctccaccccctcgtcatc 210
           ||||||||||||||||||||
Sbjct: 342 agctccaccccctcgtcatc 323
to top
>gb|AC090582.9| Homo sapiens chromosome 11, clone RP11-125F14, complete sequence
          Length = 96560

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 284   aggcccaggcctcctgctcc 303
             ||||||||||||||||||||
Sbjct: 79490 aggcccaggcctcctgctcc 79471
to top
>emb|AL606632.5| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042L16,
              complete sequence
          Length = 163738

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 359    gggtgcagcgcgggcggacg 378
              ||||||||||||||||||||
Sbjct: 156915 gggtgcagcgcgggcggacg 156934
to top
>ref|XM_738735.1| Plasmodium chabaudi chabaudi hypothetical protein (PC000366.04.0)
            partial mRNA
          Length = 1848

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 392  acagcttcgagctcgtcctc 411
            ||||||||||||||||||||
Sbjct: 1820 acagcttcgagctcgtcctc 1801
to top
>gb|AC163225.4| Mus musculus chromosome 8, clone RP23-319L22, complete sequence
          Length = 192661

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 500    gctggtactcaactggaagc 519
              ||||||||||||||||||||
Sbjct: 116838 gctggtactcaactggaagc 116819
to top
>emb|AJ224904.1|AXY224904 Alcaligenes xylosoxidans subsp. denitrificans DSM 30026 nirK gene,
           partial
          Length = 425

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 317 cggcgcccgcggagccgccg 336
           ||||||||||||||||||||
Sbjct: 415 cggcgcccgcggagccgccg 396
to top
>gb|AC090559.7| Homo sapiens chromosome 11, clone RP11-750H9, complete sequence
          Length = 202539

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 284   aggcccaggcctcctgctcc 303
             ||||||||||||||||||||
Sbjct: 15583 aggcccaggcctcctgctcc 15564
to top
>dbj|AK160923.1| Mus musculus 18 days pregnant adult female placenta and extra
           embryonic tissue cDNA, RIKEN full-length enriched
           library, clone:3830425K14 product:hypothetical SAM (and
           some other nucleotide) binding motif containing protein,
           full insert sequence
          Length = 2367

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 445 ctggagaagaagcttgagct 464
           ||||||||||||||||||||
Sbjct: 638 ctggagaagaagcttgagct 657
to top
>dbj|AK003724.2| Mus musculus 18-day embryo whole body cDNA, RIKEN full-length
           enriched library, clone:1110015E04 product:RIKEN cDNA
           A930016P21 gene, full insert sequence
          Length = 678

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 445 ctggagaagaagcttgagct 464
           ||||||||||||||||||||
Sbjct: 40  ctggagaagaagcttgagct 59
to top
>dbj|AK044518.1| Mus musculus adult retina cDNA, RIKEN full-length enriched library,
           clone:A930018I07 product:RIKEN cDNA A930016P21 gene,
           full insert sequence
          Length = 4384

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 445 ctggagaagaagcttgagct 464
           ||||||||||||||||||||
Sbjct: 38  ctggagaagaagcttgagct 57
to top
>dbj|AK020868.1| Mus musculus adult retina cDNA, RIKEN full-length enriched library,
           clone:A930016P21 product:hypothetical SAM (and some
           other nucleotide) binding motif containing protein, full
           insert sequence
          Length = 1167

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 445 ctggagaagaagcttgagct 464
           ||||||||||||||||||||
Sbjct: 511 ctggagaagaagcttgagct 530
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 359      gggtgcagcgcgggcggacg 378
                ||||||||||||||||||||
Sbjct: 21343441 gggtgcagcgcgggcggacg 21343460
to top
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 425     gcacgctcgagcgcgccttc 444
               ||||||||||||||||||||
Sbjct: 4694576 gcacgctcgagcgcgccttc 4694557
to top
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 106  ccgacgatgtcgacgccctc 125
            ||||||||||||||||||||
Sbjct: 6188 ccgacgatgtcgacgccctc 6169
to top
>gb|AC160764.2| Ornithorhynchus anatinus BAC clone OABb-454A1 from chromosome unknown,
             complete sequence
          Length = 125050

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 319   gcgcccgcggagccgccgag 338
             ||||||||||||||||||||
Sbjct: 80792 gcgcccgcggagccgccgag 80811
to top
>dbj|AP005179.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBb0084L07
          Length = 127992

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 425   gcacgctcgagcgcgccttc 444
             ||||||||||||||||||||
Sbjct: 12486 gcacgctcgagcgcgccttc 12467
to top
>dbj|AK103069.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033117P16, full
           insert sequence
          Length = 1393

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 425 gcacgctcgagcgcgccttc 444
           ||||||||||||||||||||
Sbjct: 210 gcacgctcgagcgcgccttc 229
to top
>dbj|AK070740.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023063N02, full
           insert sequence
          Length = 1662

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 359 gggtgcagcgcgggcggacg 378
           ||||||||||||||||||||
Sbjct: 362 gggtgcagcgcgggcggacg 343
to top
>dbj|AP004384.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0506C07
          Length = 123451

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 425    gcacgctcgagcgcgccttc 444
              ||||||||||||||||||||
Sbjct: 101949 gcacgctcgagcgcgccttc 101930
to top
>gb|AF114788.1|AF114788 Paracoccus denitrificans copper dependent nitrite reductase (nir)
           gene, partial cds
          Length = 473

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 317 cggcgcccgcggagccgccg 336
           ||||||||||||||||||||
Sbjct: 411 cggcgcccgcggagccgccg 392
to top
>dbj|AP003395.1| Homo sapiens genomic DNA, chromosome 11q clone:RP11-305N23, complete
             sequences
          Length = 205596

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 443   tcctggagaagaagcttgag 462
             ||||||||||||||||||||
Sbjct: 32928 tcctggagaagaagcttgag 32947
to top
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence
          Length = 3809201

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 422     ccggcacgctcgagcgcgcc 441
               ||||||||||||||||||||
Sbjct: 2766177 ccggcacgctcgagcgcgcc 2766158
to top
>gb|AY609656.1| Sus scrofa clone Clu_2389.scr.msk.p1.Contig3, mRNA sequence
          Length = 2201

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 161  cggccacctccagcagcggc 180
            ||||||||||||||||||||
Sbjct: 1517 cggccacctccagcagcggc 1536
to top
>emb|AL732377.4|CNS08C90 Oryza sativa chromosome 12, . BAC OSJNBa0036E08 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 149022

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 408   cctcgaccccgtcaccggcacgctcgag 435
             ||||||| ||||| ||||||||||||||
Sbjct: 75587 cctcgacgccgtcgccggcacgctcgag 75614
to top
>emb|AL365314.16| Mouse DNA sequence from clone RP23-106N23 on chromosome 1, complete
              sequence
          Length = 182054

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 500    gctggtactcaactggaagc 519
              ||||||||||||||||||||
Sbjct: 133415 gctggtactcaactggaagc 133434


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,947,417
Number of Sequences: 3902068
Number of extensions: 3947417
Number of successful extensions: 81934
Number of sequences better than 10.0: 87
Number of HSP's better than 10.0 without gapping: 89
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 81075
Number of HSP's gapped (non-prelim): 858
length of query: 595
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 572
effective length of database: 17,143,297,704
effective search space: 9805966286688
effective search space used: 9805966286688
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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