Clone Name | bart43g08 |
---|---|
Clone Library Name | barley_pub |
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 121 bits (61), Expect = 2e-24 Identities = 151/181 (83%) Strand = Plus / Plus Query: 339 ggcggtggtatactgccgggccgacagcgccaggctctgcttgccgtgcgaccgccacgt 398 ||||||||| || ||| |||||||| || ||||||||| |||| |||||||||||||| Sbjct: 13127757 ggcggtggtgtattgcagggccgacgcggcgaggctctgcctgccatgcgaccgccacgt 13127816 Query: 399 gcacgccgctaacgcagtctgctcccgccacctgcgcgccccgctctgcgccgcatgccg 458 ||||| ||| |||| || |||||||||||| |||||| |||||||||||||| ||| Sbjct: 13127817 gcacggcgccaacggggtgtgctcccgccacgcgcgcgcgccgctctgcgccgcgtgcgc 13127876 Query: 459 cgccaccggggccgtcttccgccacggcggccccgaattcctctgctccaactgcgactt 518 |||| | |||||||||||||||| |||| || ||||||||||||||||||||||| Sbjct: 13127877 cgccgcgggggccgtcttccgccggggcgcgggcggcttcctctgctccaactgcgactt 13127936 Query: 519 c 519 | Sbjct: 13127937 c 13127937
>gb|AC135257.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OJ1113A07, from chromosome 3, complete sequence Length = 151173 Score = 121 bits (61), Expect = 2e-24 Identities = 151/181 (83%) Strand = Plus / Minus Query: 339 ggcggtggtatactgccgggccgacagcgccaggctctgcttgccgtgcgaccgccacgt 398 ||||||||| || ||| |||||||| || ||||||||| |||| |||||||||||||| Sbjct: 98881 ggcggtggtgtattgcagggccgacgcggcgaggctctgcctgccatgcgaccgccacgt 98822 Query: 399 gcacgccgctaacgcagtctgctcccgccacctgcgcgccccgctctgcgccgcatgccg 458 ||||| ||| |||| || |||||||||||| |||||| |||||||||||||| ||| Sbjct: 98821 gcacggcgccaacggggtgtgctcccgccacgcgcgcgcgccgctctgcgccgcgtgcgc 98762 Query: 459 cgccaccggggccgtcttccgccacggcggccccgaattcctctgctccaactgcgactt 518 |||| | |||||||||||||||| |||| || ||||||||||||||||||||||| Sbjct: 98761 cgccgcgggggccgtcttccgccggggcgcgggcggcttcctctgctccaactgcgactt 98702 Query: 519 c 519 | Sbjct: 98701 c 98701
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 121 bits (61), Expect = 2e-24 Identities = 151/181 (83%) Strand = Plus / Plus Query: 339 ggcggtggtatactgccgggccgacagcgccaggctctgcttgccgtgcgaccgccacgt 398 ||||||||| || ||| |||||||| || ||||||||| |||| |||||||||||||| Sbjct: 13124532 ggcggtggtgtattgcagggccgacgcggcgaggctctgcctgccatgcgaccgccacgt 13124591 Query: 399 gcacgccgctaacgcagtctgctcccgccacctgcgcgccccgctctgcgccgcatgccg 458 ||||| ||| |||| || |||||||||||| |||||| |||||||||||||| ||| Sbjct: 13124592 gcacggcgccaacggggtgtgctcccgccacgcgcgcgcgccgctctgcgccgcgtgcgc 13124651 Query: 459 cgccaccggggccgtcttccgccacggcggccccgaattcctctgctccaactgcgactt 518 |||| | |||||||||||||||| |||| || ||||||||||||||||||||||| Sbjct: 13124652 cgccgcgggggccgtcttccgccggggcgcgggcggcttcctctgctccaactgcgactt 13124711 Query: 519 c 519 | Sbjct: 13124712 c 13124712
>dbj|AK101822.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033067J11, full insert sequence Length = 1641 Score = 121 bits (61), Expect = 2e-24 Identities = 151/181 (83%) Strand = Plus / Plus Query: 339 ggcggtggtatactgccgggccgacagcgccaggctctgcttgccgtgcgaccgccacgt 398 ||||||||| || ||| |||||||| || ||||||||| |||| |||||||||||||| Sbjct: 294 ggcggtggtgtattgcagggccgacgcggcgaggctctgcctgccatgcgaccgccacgt 353 Query: 399 gcacgccgctaacgcagtctgctcccgccacctgcgcgccccgctctgcgccgcatgccg 458 ||||| ||| |||| || |||||||||||| |||||| |||||||||||||| ||| Sbjct: 354 gcacggcgccaacggggtgtgctcccgccacgcgcgcgcgccgctctgcgccgcgtgcgc 413 Query: 459 cgccaccggggccgtcttccgccacggcggccccgaattcctctgctccaactgcgactt 518 |||| | |||||||||||||||| |||| || ||||||||||||||||||||||| Sbjct: 414 cgccgcgggggccgtcttccgccggggcgcgggcggcttcctctgctccaactgcgactt 473 Query: 519 c 519 | Sbjct: 474 c 474
>dbj|AK099864.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013111C11, full insert sequence Length = 1571 Score = 121 bits (61), Expect = 2e-24 Identities = 151/181 (83%) Strand = Plus / Plus Query: 339 ggcggtggtatactgccgggccgacagcgccaggctctgcttgccgtgcgaccgccacgt 398 ||||||||| || ||| |||||||| || ||||||||| |||| |||||||||||||| Sbjct: 262 ggcggtggtgtattgcagggccgacgcggcgaggctctgcctgccatgcgaccgccacgt 321 Query: 399 gcacgccgctaacgcagtctgctcccgccacctgcgcgccccgctctgcgccgcatgccg 458 ||||| ||| |||| || |||||||||||| |||||| |||||||||||||| ||| Sbjct: 322 gcacggcgccaacggggtgtgctcccgccacgcgcgcgcgccgctctgcgccgcgtgcgc 381 Query: 459 cgccaccggggccgtcttccgccacggcggccccgaattcctctgctccaactgcgactt 518 |||| | |||||||||||||||| |||| || ||||||||||||||||||||||| Sbjct: 382 cgccgcgggggccgtcttccgccggggcgcgggcggcttcctctgctccaactgcgactt 441 Query: 519 c 519 | Sbjct: 442 c 442
>dbj|AB001882.1| Oryza sativa (japonica cultivar-group) mRNA for zinc finger protein, complete cds, clone:C60910 Length = 1497 Score = 121 bits (61), Expect = 2e-24 Identities = 151/181 (83%) Strand = Plus / Plus Query: 339 ggcggtggtatactgccgggccgacagcgccaggctctgcttgccgtgcgaccgccacgt 398 ||||||||| || ||| |||||||| || ||||||||| |||| |||||||||||||| Sbjct: 258 ggcggtggtgtattgcagggccgacgcggcgaggctctgcctgccatgcgaccgccacgt 317 Query: 399 gcacgccgctaacgcagtctgctcccgccacctgcgcgccccgctctgcgccgcatgccg 458 ||||| ||| |||| || |||||||||||| |||||| |||||||||||||| ||| Sbjct: 318 gcacggcgccaacggggtgtgctcccgccacgcgcgcgcgccgctctgcgccgcgtgcgc 377 Query: 459 cgccaccggggccgtcttccgccacggcggccccgaattcctctgctccaactgcgactt 518 |||| | |||||||||||||||| |||| || ||||||||||||||||||||||| Sbjct: 378 cgccgcgggggccgtcttccgccggggcgcgggcggcttcctctgctccaactgcgactt 437 Query: 519 c 519 | Sbjct: 438 c 438
>ref|NM_186092.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1140 Score = 65.9 bits (33), Expect = 1e-07 Identities = 60/69 (86%) Strand = Plus / Plus Query: 339 ggcggtggtatactgccgggccgacagcgccaggctctgcttgccgtgcgaccgccacgt 398 ||||||||| |||||||| |||||| || ||||| ||| ||||||||||||||||||| Sbjct: 93 ggcggtggtgtactgccgcgccgactcggcgaggctgtgcctgccgtgcgaccgccacgt 152 Query: 399 gcacgccgc 407 |||||||| Sbjct: 153 ccacgccgc 161 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 496 ttcctctgctccaactgcgacttcg 520 ||||||||||||| ||||||||||| Sbjct: 250 ttcctctgctccagctgcgacttcg 274
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 65.9 bits (33), Expect = 1e-07 Identities = 60/69 (86%) Strand = Plus / Minus Query: 339 ggcggtggtatactgccgggccgacagcgccaggctctgcttgccgtgcgaccgccacgt 398 ||||||||| |||||||| |||||| || ||||| ||| ||||||||||||||||||| Sbjct: 28134091 ggcggtggtgtactgccgcgccgactcggcgaggctgtgcctgccgtgcgaccgccacgt 28134032 Query: 399 gcacgccgc 407 |||||||| Sbjct: 28134031 ccacgccgc 28134023 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 496 ttcctctgctccaactgcgacttcg 520 ||||||||||||| ||||||||||| Sbjct: 28133934 ttcctctgctccagctgcgacttcg 28133910
>dbj|AP004274.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0450A04 Length = 162545 Score = 65.9 bits (33), Expect = 1e-07 Identities = 60/69 (86%) Strand = Plus / Minus Query: 339 ggcggtggtatactgccgggccgacagcgccaggctctgcttgccgtgcgaccgccacgt 398 ||||||||| |||||||| |||||| || ||||| ||| ||||||||||||||||||| Sbjct: 117387 ggcggtggtgtactgccgcgccgactcggcgaggctgtgcctgccgtgcgaccgccacgt 117328 Query: 399 gcacgccgc 407 |||||||| Sbjct: 117327 ccacgccgc 117319 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 496 ttcctctgctccaactgcgacttcg 520 ||||||||||||| ||||||||||| Sbjct: 117230 ttcctctgctccagctgcgacttcg 117206
>dbj|AK120101.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013022K23, full insert sequence Length = 1548 Score = 65.9 bits (33), Expect = 1e-07 Identities = 60/69 (86%) Strand = Plus / Plus Query: 339 ggcggtggtatactgccgggccgacagcgccaggctctgcttgccgtgcgaccgccacgt 398 ||||||||| |||||||| |||||| || ||||| ||| ||||||||||||||||||| Sbjct: 175 ggcggtggtgtactgccgcgccgactcggcgaggctgtgcctgccgtgcgaccgccacgt 234 Query: 399 gcacgccgc 407 |||||||| Sbjct: 235 ccacgccgc 243 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 496 ttcctctgctccaactgcgacttcg 520 ||||||||||||| ||||||||||| Sbjct: 332 ttcctctgctccagctgcgacttcg 356
>ref|XM_483536.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1892 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Plus Query: 385 tgcgaccgccacgtgcacgccgctaacgc 413 ||||||||||||||||||||||| ||||| Sbjct: 235 tgcgaccgccacgtgcacgccgccaacgc 263 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 433 cgcgccccgctctgcgccgc 452 |||||||||||||||||||| Sbjct: 283 cgcgccccgctctgcgccgc 302
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Minus Query: 385 tgcgaccgccacgtgcacgccgctaacgc 413 ||||||||||||||||||||||| ||||| Sbjct: 26789639 tgcgaccgccacgtgcacgccgccaacgc 26789611 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 433 cgcgccccgctctgcgccgc 452 |||||||||||||||||||| Sbjct: 26789591 cgcgccccgctctgcgccgc 26789572
>dbj|AP005439.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0033D24 Length = 186132 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Minus Query: 385 tgcgaccgccacgtgcacgccgctaacgc 413 ||||||||||||||||||||||| ||||| Sbjct: 132981 tgcgaccgccacgtgcacgccgccaacgc 132953 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 433 cgcgccccgctctgcgccgc 452 |||||||||||||||||||| Sbjct: 132933 cgcgccccgctctgcgccgc 132914
>dbj|AP004464.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0665C04 Length = 177054 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Minus Query: 385 tgcgaccgccacgtgcacgccgctaacgc 413 ||||||||||||||||||||||| ||||| Sbjct: 52429 tgcgaccgccacgtgcacgccgccaacgc 52401 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 433 cgcgccccgctctgcgccgc 452 |||||||||||||||||||| Sbjct: 52381 cgcgccccgctctgcgccgc 52362
>dbj|AK099722.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013088K05, full insert sequence Length = 1892 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Plus Query: 385 tgcgaccgccacgtgcacgccgctaacgc 413 ||||||||||||||||||||||| ||||| Sbjct: 235 tgcgaccgccacgtgcacgccgccaacgc 263 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 433 cgcgccccgctctgcgccgc 452 |||||||||||||||||||| Sbjct: 283 cgcgccccgctctgcgccgc 302
>gb|AC137595.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone OSJNBa0094K23, complete sequence Length = 167482 Score = 48.1 bits (24), Expect = 0.029 Identities = 39/44 (88%) Strand = Plus / Minus Query: 370 aggctctgcttgccgtgcgaccgccacgtgcacgccgctaacgc 413 ||||| ||| || ||||||||||||||||||||| ||| ||||| Sbjct: 86948 aggctgtgcgtggcgtgcgaccgccacgtgcacggcgcgaacgc 86905
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 48.1 bits (24), Expect = 0.029 Identities = 39/44 (88%) Strand = Plus / Minus Query: 370 aggctctgcttgccgtgcgaccgccacgtgcacgccgctaacgc 413 ||||| ||| || ||||||||||||||||||||| ||| ||||| Sbjct: 19491541 aggctgtgcgtggcgtgcgaccgccacgtgcacggcgcgaacgc 19491498
>dbj|AK120589.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013145I18, full insert sequence Length = 1817 Score = 48.1 bits (24), Expect = 0.029 Identities = 39/44 (88%) Strand = Plus / Plus Query: 370 aggctctgcttgccgtgcgaccgccacgtgcacgccgctaacgc 413 ||||| ||| || ||||||||||||||||||||| ||| ||||| Sbjct: 170 aggctgtgcgtggcgtgcgaccgccacgtgcacggcgcgaacgc 213
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 110 accccgccacgtcgccggcctc 131 |||||||||||||||||||||| Sbjct: 11683757 accccgccacgtcgccggcctc 11683778
>dbj|AP004583.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBb0005N06 Length = 140639 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 110 accccgccacgtcgccggcctc 131 |||||||||||||||||||||| Sbjct: 32299 accccgccacgtcgccggcctc 32320
>gb|AC116107.10| Mus musculus chromosome 1, clone RP23-28F18, complete sequence Length = 262581 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 130 tcagagctcacagtcatccac 150 ||||||||||||||||||||| Sbjct: 158158 tcagagctcacagtcatccac 158138
>emb|Z82186.1|HS49D8 Human DNA sequence from clone CITF22-49D8 on chromosome 22, complete sequence Length = 35860 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 434 gcgccccgctctgcgccgcat 454 ||||||||||||||||||||| Sbjct: 34846 gcgccccgctctgcgccgcat 34866
>ref|XM_463820.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1365 Score = 40.1 bits (20), Expect = 7.1 Identities = 32/36 (88%) Strand = Plus / Plus Query: 427 cacctgcgcgccccgctctgcgccgcatgccgcgcc 462 |||| ||||||||||||||||| ||| |||| |||| Sbjct: 226 caccggcgcgccccgctctgcgacgcgtgccacgcc 261
>ref|XM_366058.1| Magnaporthe grisea 70-15 predicted protein (MG10278.4) partial mRNA Length = 1422 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 245 tgggtcaagacgagcgccag 264 |||||||||||||||||||| Sbjct: 1258 tgggtcaagacgagcgccag 1277
>ref|XM_958644.1| Neurospora crassa OR74A hypothetical protein (NCU03245.1) partial mRNA Length = 318 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 284 tggacaaggagctctccggc 303 |||||||||||||||||||| Sbjct: 95 tggacaaggagctctccggc 114
>ref|XM_330680.1| Neurospora crassa OR74A hypothetical protein (NCU03245.1) partial mRNA Length = 318 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 284 tggacaaggagctctccggc 303 |||||||||||||||||||| Sbjct: 95 tggacaaggagctctccggc 114
>gb|AC138019.26| Papio anubis clone rp41-133b2, complete sequence Length = 204007 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 133 gagctcacagtcatccacag 152 |||||||||||||||||||| Sbjct: 166029 gagctcacagtcatccacag 166048
>gb|AF381614.1|AF381614 Magnaporthe grisea clone BAC 14F6 gene sequence Length = 110467 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 245 tgggtcaagacgagcgccag 264 |||||||||||||||||||| Sbjct: 93114 tgggtcaagacgagcgccag 93095
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 gttcttgtccggctcgtcga 54 |||||||||||||||||||| Sbjct: 1175991 gttcttgtccggctcgtcga 1175972
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome Length = 2909809 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 446 gcgccgcatgccgcgccaccgggg 469 ||||||||| |||||||||||||| Sbjct: 342222 gcgccgcataccgcgccaccgggg 342245
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 113 ccgccacgtcgccggcctca 132 |||||||||||||||||||| Sbjct: 20777716 ccgccacgtcgccggcctca 20777735 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 113 ccgccacgtcgccggcctca 132 |||||||||||||||||||| Sbjct: 20765671 ccgccacgtcgccggcctca 20765690
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 7.1 Identities = 32/36 (88%) Strand = Plus / Minus Query: 427 cacctgcgcgccccgctctgcgccgcatgccgcgcc 462 |||| ||||||||||||||||| ||| |||| |||| Sbjct: 551341 caccggcgcgccccgctctgcgacgcgtgccacgcc 551306
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 446 gcgccgcatgccgcgccacc 465 |||||||||||||||||||| Sbjct: 8652037 gcgccgcatgccgcgccacc 8652056
>dbj|AP004752.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0501G04 Length = 156603 Score = 40.1 bits (20), Expect = 7.1 Identities = 32/36 (88%) Strand = Plus / Minus Query: 427 cacctgcgcgccccgctctgcgccgcatgccgcgcc 462 |||| ||||||||||||||||| ||| |||| |||| Sbjct: 29394 caccggcgcgccccgctctgcgacgcgtgccacgcc 29359
>emb|BX255914.3| Zebrafish DNA sequence from clone CH211-212G7 in linkage group 20, complete sequence Length = 217957 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 ggcctcagagctcacagtca 145 |||||||||||||||||||| Sbjct: 22578 ggcctcagagctcacagtca 22597
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 113 ccgccacgtcgccggcctca 132 |||||||||||||||||||| Sbjct: 20703930 ccgccacgtcgccggcctca 20703949 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 113 ccgccacgtcgccggcctca 132 |||||||||||||||||||| Sbjct: 20691885 ccgccacgtcgccggcctca 20691904
>emb|AL732377.4|CNS08C90 Oryza sativa chromosome 12, . BAC OSJNBa0036E08 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 149022 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 113 ccgccacgtcgccggcctca 132 |||||||||||||||||||| Sbjct: 75557 ccgccacgtcgccggcctca 75576 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 113 ccgccacgtcgccggcctca 132 |||||||||||||||||||| Sbjct: 63512 ccgccacgtcgccggcctca 63531
>emb|AL806512.9| Mouse DNA sequence from clone RP23-354A20 on chromosome 4, complete sequence Length = 211131 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 431 tgcgcgccccgctctgcgcc 450 |||||||||||||||||||| Sbjct: 46870 tgcgcgccccgctctgcgcc 46851 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,882,133 Number of Sequences: 3902068 Number of extensions: 2882133 Number of successful extensions: 57324 Number of sequences better than 10.0: 38 Number of HSP's better than 10.0 without gapping: 38 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 56818 Number of HSP's gapped (non-prelim): 506 length of query: 526 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 503 effective length of database: 17,143,297,704 effective search space: 8623078745112 effective search space used: 8623078745112 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)