ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart43g08
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 121 2e-24
2gb|AC135257.1| Genomic sequence for Oryza sativa, Nipponbare str... 121 2e-24
3dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 121 2e-24
4dbj|AK101822.1| Oryza sativa (japonica cultivar-group) cDNA clon... 121 2e-24
5dbj|AK099864.1| Oryza sativa (japonica cultivar-group) cDNA clon... 121 2e-24
6dbj|AB001882.1| Oryza sativa (japonica cultivar-group) mRNA for ... 121 2e-24
7ref|NM_186092.1| Oryza sativa (japonica cultivar-group), mRNA 66 1e-07
8dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 66 1e-07
9dbj|AP004274.5| Oryza sativa (japonica cultivar-group) genomic D... 66 1e-07
10dbj|AK120101.1| Oryza sativa (japonica cultivar-group) cDNA clon... 66 1e-07
11ref|XM_483536.1| Oryza sativa (japonica cultivar-group), mRNA 50 0.007
12dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.007
13dbj|AP005439.3| Oryza sativa (japonica cultivar-group) genomic D... 50 0.007
14dbj|AP004464.3| Oryza sativa (japonica cultivar-group) genomic D... 50 0.007
15dbj|AK099722.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.007
16gb|AC137595.2| Oryza sativa (japonica cultivar-group) chromosome... 48 0.029
17dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.029
18dbj|AK120589.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.029
19dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.46
20dbj|AP004583.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.46
21gb|AC116107.10| Mus musculus chromosome 1, clone RP23-28F18, com... 42 1.8
22emb|Z82186.1|HS49D8 Human DNA sequence from clone CITF22-49D8 on... 42 1.8
23ref|XM_463820.1| Oryza sativa (japonica cultivar-group), mRNA 40 7.1
24ref|XM_366058.1| Magnaporthe grisea 70-15 predicted protein (MG1... 40 7.1
25ref|XM_958644.1| Neurospora crassa OR74A hypothetical protein (N... 40 7.1
26ref|XM_330680.1| Neurospora crassa OR74A hypothetical protein (N... 40 7.1
27gb|AC138019.26| Papio anubis clone rp41-133b2, complete sequence 40 7.1
28gb|AF381614.1|AF381614 Magnaporthe grisea clone BAC 14F6 gene se... 40 7.1
29gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 40 7.1
30gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete g... 40 7.1
31dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.1
32dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.1
33dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 7.1
34dbj|AP004752.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.1
35emb|BX255914.3| Zebrafish DNA sequence from clone CH211-212G7 in... 40 7.1
36gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 7.1
37emb|AL732377.4|CNS08C90 Oryza sativa chromosome 12, . BAC OSJNBa... 40 7.1
38emb|AL806512.9| Mouse DNA sequence from clone RP23-354A20 on chr... 40 7.1

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  121 bits (61), Expect = 2e-24
 Identities = 151/181 (83%)
 Strand = Plus / Plus

                                                                            
Query: 339      ggcggtggtatactgccgggccgacagcgccaggctctgcttgccgtgcgaccgccacgt 398
                ||||||||| || ||| ||||||||   || ||||||||| |||| ||||||||||||||
Sbjct: 13127757 ggcggtggtgtattgcagggccgacgcggcgaggctctgcctgccatgcgaccgccacgt 13127816

                                                                            
Query: 399      gcacgccgctaacgcagtctgctcccgccacctgcgcgccccgctctgcgccgcatgccg 458
                ||||| ||| ||||  || ||||||||||||  |||||| |||||||||||||| |||  
Sbjct: 13127817 gcacggcgccaacggggtgtgctcccgccacgcgcgcgcgccgctctgcgccgcgtgcgc 13127876

                                                                            
Query: 459      cgccaccggggccgtcttccgccacggcggccccgaattcctctgctccaactgcgactt 518
                |||| | ||||||||||||||||  ||||    ||  |||||||||||||||||||||||
Sbjct: 13127877 cgccgcgggggccgtcttccgccggggcgcgggcggcttcctctgctccaactgcgactt 13127936

                 
Query: 519      c 519
                |
Sbjct: 13127937 c 13127937



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>gb|AC135257.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OJ1113A07,
             from chromosome 3, complete sequence
          Length = 151173

 Score =  121 bits (61), Expect = 2e-24
 Identities = 151/181 (83%)
 Strand = Plus / Minus

                                                                         
Query: 339   ggcggtggtatactgccgggccgacagcgccaggctctgcttgccgtgcgaccgccacgt 398
             ||||||||| || ||| ||||||||   || ||||||||| |||| ||||||||||||||
Sbjct: 98881 ggcggtggtgtattgcagggccgacgcggcgaggctctgcctgccatgcgaccgccacgt 98822

                                                                         
Query: 399   gcacgccgctaacgcagtctgctcccgccacctgcgcgccccgctctgcgccgcatgccg 458
             ||||| ||| ||||  || ||||||||||||  |||||| |||||||||||||| |||  
Sbjct: 98821 gcacggcgccaacggggtgtgctcccgccacgcgcgcgcgccgctctgcgccgcgtgcgc 98762

                                                                         
Query: 459   cgccaccggggccgtcttccgccacggcggccccgaattcctctgctccaactgcgactt 518
             |||| | ||||||||||||||||  ||||    ||  |||||||||||||||||||||||
Sbjct: 98761 cgccgcgggggccgtcttccgccggggcgcgggcggcttcctctgctccaactgcgactt 98702

              
Query: 519   c 519
             |
Sbjct: 98701 c 98701



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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  121 bits (61), Expect = 2e-24
 Identities = 151/181 (83%)
 Strand = Plus / Plus

                                                                            
Query: 339      ggcggtggtatactgccgggccgacagcgccaggctctgcttgccgtgcgaccgccacgt 398
                ||||||||| || ||| ||||||||   || ||||||||| |||| ||||||||||||||
Sbjct: 13124532 ggcggtggtgtattgcagggccgacgcggcgaggctctgcctgccatgcgaccgccacgt 13124591

                                                                            
Query: 399      gcacgccgctaacgcagtctgctcccgccacctgcgcgccccgctctgcgccgcatgccg 458
                ||||| ||| ||||  || ||||||||||||  |||||| |||||||||||||| |||  
Sbjct: 13124592 gcacggcgccaacggggtgtgctcccgccacgcgcgcgcgccgctctgcgccgcgtgcgc 13124651

                                                                            
Query: 459      cgccaccggggccgtcttccgccacggcggccccgaattcctctgctccaactgcgactt 518
                |||| | ||||||||||||||||  ||||    ||  |||||||||||||||||||||||
Sbjct: 13124652 cgccgcgggggccgtcttccgccggggcgcgggcggcttcctctgctccaactgcgactt 13124711

                 
Query: 519      c 519
                |
Sbjct: 13124712 c 13124712



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>dbj|AK101822.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033067J11, full
           insert sequence
          Length = 1641

 Score =  121 bits (61), Expect = 2e-24
 Identities = 151/181 (83%)
 Strand = Plus / Plus

                                                                       
Query: 339 ggcggtggtatactgccgggccgacagcgccaggctctgcttgccgtgcgaccgccacgt 398
           ||||||||| || ||| ||||||||   || ||||||||| |||| ||||||||||||||
Sbjct: 294 ggcggtggtgtattgcagggccgacgcggcgaggctctgcctgccatgcgaccgccacgt 353

                                                                       
Query: 399 gcacgccgctaacgcagtctgctcccgccacctgcgcgccccgctctgcgccgcatgccg 458
           ||||| ||| ||||  || ||||||||||||  |||||| |||||||||||||| |||  
Sbjct: 354 gcacggcgccaacggggtgtgctcccgccacgcgcgcgcgccgctctgcgccgcgtgcgc 413

                                                                       
Query: 459 cgccaccggggccgtcttccgccacggcggccccgaattcctctgctccaactgcgactt 518
           |||| | ||||||||||||||||  ||||    ||  |||||||||||||||||||||||
Sbjct: 414 cgccgcgggggccgtcttccgccggggcgcgggcggcttcctctgctccaactgcgactt 473

            
Query: 519 c 519
           |
Sbjct: 474 c 474



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>dbj|AK099864.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013111C11, full
           insert sequence
          Length = 1571

 Score =  121 bits (61), Expect = 2e-24
 Identities = 151/181 (83%)
 Strand = Plus / Plus

                                                                       
Query: 339 ggcggtggtatactgccgggccgacagcgccaggctctgcttgccgtgcgaccgccacgt 398
           ||||||||| || ||| ||||||||   || ||||||||| |||| ||||||||||||||
Sbjct: 262 ggcggtggtgtattgcagggccgacgcggcgaggctctgcctgccatgcgaccgccacgt 321

                                                                       
Query: 399 gcacgccgctaacgcagtctgctcccgccacctgcgcgccccgctctgcgccgcatgccg 458
           ||||| ||| ||||  || ||||||||||||  |||||| |||||||||||||| |||  
Sbjct: 322 gcacggcgccaacggggtgtgctcccgccacgcgcgcgcgccgctctgcgccgcgtgcgc 381

                                                                       
Query: 459 cgccaccggggccgtcttccgccacggcggccccgaattcctctgctccaactgcgactt 518
           |||| | ||||||||||||||||  ||||    ||  |||||||||||||||||||||||
Sbjct: 382 cgccgcgggggccgtcttccgccggggcgcgggcggcttcctctgctccaactgcgactt 441

            
Query: 519 c 519
           |
Sbjct: 442 c 442



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>dbj|AB001882.1| Oryza sativa (japonica cultivar-group) mRNA for zinc finger
           protein, complete cds, clone:C60910
          Length = 1497

 Score =  121 bits (61), Expect = 2e-24
 Identities = 151/181 (83%)
 Strand = Plus / Plus

                                                                       
Query: 339 ggcggtggtatactgccgggccgacagcgccaggctctgcttgccgtgcgaccgccacgt 398
           ||||||||| || ||| ||||||||   || ||||||||| |||| ||||||||||||||
Sbjct: 258 ggcggtggtgtattgcagggccgacgcggcgaggctctgcctgccatgcgaccgccacgt 317

                                                                       
Query: 399 gcacgccgctaacgcagtctgctcccgccacctgcgcgccccgctctgcgccgcatgccg 458
           ||||| ||| ||||  || ||||||||||||  |||||| |||||||||||||| |||  
Sbjct: 318 gcacggcgccaacggggtgtgctcccgccacgcgcgcgcgccgctctgcgccgcgtgcgc 377

                                                                       
Query: 459 cgccaccggggccgtcttccgccacggcggccccgaattcctctgctccaactgcgactt 518
           |||| | ||||||||||||||||  ||||    ||  |||||||||||||||||||||||
Sbjct: 378 cgccgcgggggccgtcttccgccggggcgcgggcggcttcctctgctccaactgcgactt 437

            
Query: 519 c 519
           |
Sbjct: 438 c 438



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>ref|NM_186092.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1140

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 60/69 (86%)
 Strand = Plus / Plus

                                                                       
Query: 339 ggcggtggtatactgccgggccgacagcgccaggctctgcttgccgtgcgaccgccacgt 398
           ||||||||| |||||||| ||||||   || ||||| ||| |||||||||||||||||||
Sbjct: 93  ggcggtggtgtactgccgcgccgactcggcgaggctgtgcctgccgtgcgaccgccacgt 152

                    
Query: 399 gcacgccgc 407
            ||||||||
Sbjct: 153 ccacgccgc 161



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 496 ttcctctgctccaactgcgacttcg 520
           ||||||||||||| |||||||||||
Sbjct: 250 ttcctctgctccagctgcgacttcg 274



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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 60/69 (86%)
 Strand = Plus / Minus

                                                                            
Query: 339      ggcggtggtatactgccgggccgacagcgccaggctctgcttgccgtgcgaccgccacgt 398
                ||||||||| |||||||| ||||||   || ||||| ||| |||||||||||||||||||
Sbjct: 28134091 ggcggtggtgtactgccgcgccgactcggcgaggctgtgcctgccgtgcgaccgccacgt 28134032

                         
Query: 399      gcacgccgc 407
                 ||||||||
Sbjct: 28134031 ccacgccgc 28134023



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 496      ttcctctgctccaactgcgacttcg 520
                ||||||||||||| |||||||||||
Sbjct: 28133934 ttcctctgctccagctgcgacttcg 28133910



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>dbj|AP004274.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0450A04
          Length = 162545

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 60/69 (86%)
 Strand = Plus / Minus

                                                                          
Query: 339    ggcggtggtatactgccgggccgacagcgccaggctctgcttgccgtgcgaccgccacgt 398
              ||||||||| |||||||| ||||||   || ||||| ||| |||||||||||||||||||
Sbjct: 117387 ggcggtggtgtactgccgcgccgactcggcgaggctgtgcctgccgtgcgaccgccacgt 117328

                       
Query: 399    gcacgccgc 407
               ||||||||
Sbjct: 117327 ccacgccgc 117319



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 496    ttcctctgctccaactgcgacttcg 520
              ||||||||||||| |||||||||||
Sbjct: 117230 ttcctctgctccagctgcgacttcg 117206



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>dbj|AK120101.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013022K23, full
           insert sequence
          Length = 1548

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 60/69 (86%)
 Strand = Plus / Plus

                                                                       
Query: 339 ggcggtggtatactgccgggccgacagcgccaggctctgcttgccgtgcgaccgccacgt 398
           ||||||||| |||||||| ||||||   || ||||| ||| |||||||||||||||||||
Sbjct: 175 ggcggtggtgtactgccgcgccgactcggcgaggctgtgcctgccgtgcgaccgccacgt 234

                    
Query: 399 gcacgccgc 407
            ||||||||
Sbjct: 235 ccacgccgc 243



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 496 ttcctctgctccaactgcgacttcg 520
           ||||||||||||| |||||||||||
Sbjct: 332 ttcctctgctccagctgcgacttcg 356



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>ref|XM_483536.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1892

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                        
Query: 385 tgcgaccgccacgtgcacgccgctaacgc 413
           ||||||||||||||||||||||| |||||
Sbjct: 235 tgcgaccgccacgtgcacgccgccaacgc 263



 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 433 cgcgccccgctctgcgccgc 452
           ||||||||||||||||||||
Sbjct: 283 cgcgccccgctctgcgccgc 302



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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                             
Query: 385      tgcgaccgccacgtgcacgccgctaacgc 413
                ||||||||||||||||||||||| |||||
Sbjct: 26789639 tgcgaccgccacgtgcacgccgccaacgc 26789611



 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 433      cgcgccccgctctgcgccgc 452
                ||||||||||||||||||||
Sbjct: 26789591 cgcgccccgctctgcgccgc 26789572



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>dbj|AP005439.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OSJNBa0033D24
          Length = 186132

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                           
Query: 385    tgcgaccgccacgtgcacgccgctaacgc 413
              ||||||||||||||||||||||| |||||
Sbjct: 132981 tgcgaccgccacgtgcacgccgccaacgc 132953



 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 433    cgcgccccgctctgcgccgc 452
              ||||||||||||||||||||
Sbjct: 132933 cgcgccccgctctgcgccgc 132914



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>dbj|AP004464.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0665C04
          Length = 177054

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                          
Query: 385   tgcgaccgccacgtgcacgccgctaacgc 413
             ||||||||||||||||||||||| |||||
Sbjct: 52429 tgcgaccgccacgtgcacgccgccaacgc 52401



 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 433   cgcgccccgctctgcgccgc 452
             ||||||||||||||||||||
Sbjct: 52381 cgcgccccgctctgcgccgc 52362



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>dbj|AK099722.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013088K05, full
           insert sequence
          Length = 1892

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                        
Query: 385 tgcgaccgccacgtgcacgccgctaacgc 413
           ||||||||||||||||||||||| |||||
Sbjct: 235 tgcgaccgccacgtgcacgccgccaacgc 263



 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 433 cgcgccccgctctgcgccgc 452
           ||||||||||||||||||||
Sbjct: 283 cgcgccccgctctgcgccgc 302



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>gb|AC137595.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone
             OSJNBa0094K23, complete sequence
          Length = 167482

 Score = 48.1 bits (24), Expect = 0.029
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                         
Query: 370   aggctctgcttgccgtgcgaccgccacgtgcacgccgctaacgc 413
             ||||| ||| || ||||||||||||||||||||| ||| |||||
Sbjct: 86948 aggctgtgcgtggcgtgcgaccgccacgtgcacggcgcgaacgc 86905



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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 48.1 bits (24), Expect = 0.029
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                            
Query: 370      aggctctgcttgccgtgcgaccgccacgtgcacgccgctaacgc 413
                ||||| ||| || ||||||||||||||||||||| ||| |||||
Sbjct: 19491541 aggctgtgcgtggcgtgcgaccgccacgtgcacggcgcgaacgc 19491498



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>dbj|AK120589.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013145I18, full
           insert sequence
          Length = 1817

 Score = 48.1 bits (24), Expect = 0.029
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                       
Query: 370 aggctctgcttgccgtgcgaccgccacgtgcacgccgctaacgc 413
           ||||| ||| || ||||||||||||||||||||| ||| |||||
Sbjct: 170 aggctgtgcgtggcgtgcgaccgccacgtgcacggcgcgaacgc 213



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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 110      accccgccacgtcgccggcctc 131
                ||||||||||||||||||||||
Sbjct: 11683757 accccgccacgtcgccggcctc 11683778



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>dbj|AP004583.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBb0005N06
          Length = 140639

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 110   accccgccacgtcgccggcctc 131
             ||||||||||||||||||||||
Sbjct: 32299 accccgccacgtcgccggcctc 32320



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>gb|AC116107.10| Mus musculus chromosome 1, clone RP23-28F18, complete sequence
          Length = 262581

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 130    tcagagctcacagtcatccac 150
              |||||||||||||||||||||
Sbjct: 158158 tcagagctcacagtcatccac 158138



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>emb|Z82186.1|HS49D8 Human DNA sequence from clone CITF22-49D8 on chromosome 22, complete
             sequence
          Length = 35860

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 434   gcgccccgctctgcgccgcat 454
             |||||||||||||||||||||
Sbjct: 34846 gcgccccgctctgcgccgcat 34866



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>ref|XM_463820.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1365

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 427 cacctgcgcgccccgctctgcgccgcatgccgcgcc 462
           |||| ||||||||||||||||| ||| |||| ||||
Sbjct: 226 caccggcgcgccccgctctgcgacgcgtgccacgcc 261



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>ref|XM_366058.1| Magnaporthe grisea 70-15 predicted protein (MG10278.4) partial mRNA
          Length = 1422

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 245  tgggtcaagacgagcgccag 264
            ||||||||||||||||||||
Sbjct: 1258 tgggtcaagacgagcgccag 1277



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>ref|XM_958644.1| Neurospora crassa OR74A hypothetical protein (NCU03245.1) partial
           mRNA
          Length = 318

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 284 tggacaaggagctctccggc 303
           ||||||||||||||||||||
Sbjct: 95  tggacaaggagctctccggc 114



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>ref|XM_330680.1| Neurospora crassa OR74A hypothetical protein (NCU03245.1) partial
           mRNA
          Length = 318

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 284 tggacaaggagctctccggc 303
           ||||||||||||||||||||
Sbjct: 95  tggacaaggagctctccggc 114



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>gb|AC138019.26| Papio anubis clone rp41-133b2, complete sequence
          Length = 204007

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 133    gagctcacagtcatccacag 152
              ||||||||||||||||||||
Sbjct: 166029 gagctcacagtcatccacag 166048



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>gb|AF381614.1|AF381614 Magnaporthe grisea clone BAC 14F6 gene sequence
          Length = 110467

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 245   tgggtcaagacgagcgccag 264
             ||||||||||||||||||||
Sbjct: 93114 tgggtcaagacgagcgccag 93095



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>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 35      gttcttgtccggctcgtcga 54
               ||||||||||||||||||||
Sbjct: 1175991 gttcttgtccggctcgtcga 1175972



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>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome
          Length = 2909809

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 446    gcgccgcatgccgcgccaccgggg 469
              ||||||||| ||||||||||||||
Sbjct: 342222 gcgccgcataccgcgccaccgggg 342245



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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 113      ccgccacgtcgccggcctca 132
                ||||||||||||||||||||
Sbjct: 20777716 ccgccacgtcgccggcctca 20777735



 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 113      ccgccacgtcgccggcctca 132
                ||||||||||||||||||||
Sbjct: 20765671 ccgccacgtcgccggcctca 20765690



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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2,
              complete sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                  
Query: 427    cacctgcgcgccccgctctgcgccgcatgccgcgcc 462
              |||| ||||||||||||||||| ||| |||| ||||
Sbjct: 551341 caccggcgcgccccgctctgcgacgcgtgccacgcc 551306



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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 446     gcgccgcatgccgcgccacc 465
               ||||||||||||||||||||
Sbjct: 8652037 gcgccgcatgccgcgccacc 8652056



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>dbj|AP004752.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0501G04
          Length = 156603

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                 
Query: 427   cacctgcgcgccccgctctgcgccgcatgccgcgcc 462
             |||| ||||||||||||||||| ||| |||| ||||
Sbjct: 29394 caccggcgcgccccgctctgcgacgcgtgccacgcc 29359



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>emb|BX255914.3| Zebrafish DNA sequence from clone CH211-212G7 in linkage group 20,
             complete sequence
          Length = 217957

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 126   ggcctcagagctcacagtca 145
             ||||||||||||||||||||
Sbjct: 22578 ggcctcagagctcacagtca 22597



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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 113      ccgccacgtcgccggcctca 132
                ||||||||||||||||||||
Sbjct: 20703930 ccgccacgtcgccggcctca 20703949



 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 113      ccgccacgtcgccggcctca 132
                ||||||||||||||||||||
Sbjct: 20691885 ccgccacgtcgccggcctca 20691904



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>emb|AL732377.4|CNS08C90 Oryza sativa chromosome 12, . BAC OSJNBa0036E08 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 149022

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 113   ccgccacgtcgccggcctca 132
             ||||||||||||||||||||
Sbjct: 75557 ccgccacgtcgccggcctca 75576



 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 113   ccgccacgtcgccggcctca 132
             ||||||||||||||||||||
Sbjct: 63512 ccgccacgtcgccggcctca 63531



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>emb|AL806512.9| Mouse DNA sequence from clone RP23-354A20 on chromosome 4, complete
             sequence
          Length = 211131

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 431   tgcgcgccccgctctgcgcc 450
             ||||||||||||||||||||
Sbjct: 46870 tgcgcgccccgctctgcgcc 46851


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,882,133
Number of Sequences: 3902068
Number of extensions: 2882133
Number of successful extensions: 57324
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 56818
Number of HSP's gapped (non-prelim): 506
length of query: 526
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 503
effective length of database: 17,143,297,704
effective search space: 8623078745112
effective search space used: 8623078745112
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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