Clone Name | bart43g02 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | KING1_ARATH (Q8LBB2) SNF1-related protein kinase regulatory gamm... | 154 | 2e-37 | 2 | CRY1_ARATH (Q43125) Cryptochrome-1 (Blue light photoreceptor) | 30 | 4.0 | 3 | LIRB4_MOUSE (Q64281) Leukocyte immunoglobulin-like receptor subf... | 29 | 8.9 |
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>KING1_ARATH (Q8LBB2) SNF1-related protein kinase regulatory gamma subunit 1| (AKIN gamma1) (AKING1) Length = 424 Score = 154 bits (389), Expect = 2e-37 Identities = 73/104 (70%), Positives = 89/104 (85%) Frame = +1 Query: 268 SPEAEIGHRVEDLWEVAQPQLSPSEKLNSCFEDIPVAAFPRNHPSQVIEIPSDASLADTV 447 SPEA++G RVEDLW+ +PQLSP+EKLN+CFE IPV+AFP + SQ IEI SD SLA+ V Sbjct: 23 SPEAKLGMRVEDLWDEQKPQLSPNEKLNACFESIPVSAFPLSSDSQDIEIRSDTSLAEAV 82 Query: 448 ETLSKNKILSAPIRNVDAPEDATWIDKYIGIVEFAGIAMWLLHQ 579 +TLSK K+LSAP+ +VDAPEDA+WID+YIGIVEF GI +WLLHQ Sbjct: 83 QTLSKFKVLSAPVVDVDAPEDASWIDRYIGIVEFPGIVVWLLHQ 126
>CRY1_ARATH (Q43125) Cryptochrome-1 (Blue light photoreceptor)| Length = 681 Score = 30.4 bits (67), Expect = 4.0 Identities = 11/28 (39%), Positives = 15/28 (53%) Frame = -2 Query: 511 HPLEHRRFLWVHSKFYFWIMSQQYQQGW 428 HP H R L H KF+ W + + Y + W Sbjct: 307 HPYSHERPLLGHLKFFPWAVDENYFKAW 334
>LIRB4_MOUSE (Q64281) Leukocyte immunoglobulin-like receptor subfamily B member| 4 precursor (Mast cell surface glycoprotein Gp49B) Length = 335 Score = 29.3 bits (64), Expect = 8.9 Identities = 12/34 (35%), Positives = 21/34 (61%), Gaps = 1/34 (2%) Frame = -3 Query: 555 TSKFHNTDVFVYPSSILWS-IDVSYGCTQNFIFG 457 T + N + VYPSS + S + +S+ C+ + +FG Sbjct: 118 TGAYENPSLSVYPSSNVTSGVSISFSCSSSIVFG 151 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 66,276,978 Number of Sequences: 219361 Number of extensions: 1116398 Number of successful extensions: 3831 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 3729 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3831 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 5158951200 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)