ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart43f09 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_478783.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2097 Score = 212 bits (107), Expect = 9e-52 Identities = 206/239 (86%) Strand = Plus / Plus Query: 322 cgccgcgccttcgtcatcgcgcgggccggcggcgagtcccacgagctccgtgtcgacgta 381 |||||||| ||||||||||| || |||||||||||||||||||||||||| |||||||| Sbjct: 253 cgccgcgcgttcgtcatcgcccgcgccggcggcgagtcccacgagctccgcgtcgacgtc 312 Query: 382 accaacgccgcggcgccgtccgtcctcgctcacgccatccaccacggggccggcttcccg 441 |||||||| | | |||||||||||| | |||||| |||||| ||| |||||||||||| Sbjct: 313 gccaacgcctcctccccgtccgtcctctcgcacgccgtccaccgcggcgccggcttcccg 372 Query: 442 attctcactctggaggagcagttcgcggcggtggcgctgccgcccgcgcacccgccgttc 501 | || || ||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 373 acgctgacgctggaggagcagttcgcggcggtggcgctgccgccgaagcacccgccgttc 432 Query: 502 atcgaatccgtgcgccggcgcggcgtcgacatggccgacgtcctctgcgccgcgttccc 560 | || || ||||| |||||||| || ||||||| |||||| |||||||| | |||||| Sbjct: 433 gtggagtcggtgcggcggcgcggggtggacatggacgacgtgctctgcgcggtgttccc 491 Score = 131 bits (66), Expect = 3e-27 Identities = 129/150 (86%) Strand = Plus / Plus Query: 139 cacccgttcgacccgctctctccggcggagctcaccgccgtgcgcgacgccgtgctcgcc 198 |||||| ||||||| ||||| | || ||||| |||||||| |||| ||| ||||||||| Sbjct: 70 cacccgctcgaccccctctccgccgccgagcttaccgccgtccgcgccgcggtgctcgcc 129 Query: 199 tcgccactggtcccagcccgcccgctcaccttccactacgtcggcctcgacgagcccgat 258 || || || ||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130 tccccgctcgtcccggcccgcccgctcaccttccactacgtcggcctcgacgagcccgac 189 Query: 259 aagcctgacgtcctattctacgcctacggc 288 || || || || || | ||||||||||||| Sbjct: 190 aaacccgatgtgctctcctacgcctacggc 219
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 212 bits (107), Expect = 9e-52 Identities = 206/239 (86%) Strand = Plus / Plus Query: 322 cgccgcgccttcgtcatcgcgcgggccggcggcgagtcccacgagctccgtgtcgacgta 381 |||||||| ||||||||||| || |||||||||||||||||||||||||| |||||||| Sbjct: 23042659 cgccgcgcgttcgtcatcgcccgcgccggcggcgagtcccacgagctccgcgtcgacgtc 23042718 Query: 382 accaacgccgcggcgccgtccgtcctcgctcacgccatccaccacggggccggcttcccg 441 |||||||| | | |||||||||||| | |||||| |||||| ||| |||||||||||| Sbjct: 23042719 gccaacgcctcctccccgtccgtcctctcgcacgccgtccaccgcggcgccggcttcccg 23042778 Query: 442 attctcactctggaggagcagttcgcggcggtggcgctgccgcccgcgcacccgccgttc 501 | || || ||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 23042779 acgctgacgctggaggagcagttcgcggcggtggcgctgccgccgaagcacccgccgttc 23042838 Query: 502 atcgaatccgtgcgccggcgcggcgtcgacatggccgacgtcctctgcgccgcgttccc 560 | || || ||||| |||||||| || ||||||| |||||| |||||||| | |||||| Sbjct: 23042839 gtggagtcggtgcggcggcgcggggtggacatggacgacgtgctctgcgcggtgttccc 23042897 Score = 131 bits (66), Expect = 3e-27 Identities = 129/150 (86%) Strand = Plus / Plus Query: 139 cacccgttcgacccgctctctccggcggagctcaccgccgtgcgcgacgccgtgctcgcc 198 |||||| ||||||| ||||| | || ||||| |||||||| |||| ||| ||||||||| Sbjct: 23042476 cacccgctcgaccccctctccgccgccgagcttaccgccgtccgcgccgcggtgctcgcc 23042535 Query: 199 tcgccactggtcccagcccgcccgctcaccttccactacgtcggcctcgacgagcccgat 258 || || || ||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23042536 tccccgctcgtcccggcccgcccgctcaccttccactacgtcggcctcgacgagcccgac 23042595 Query: 259 aagcctgacgtcctattctacgcctacggc 288 || || || || || | ||||||||||||| Sbjct: 23042596 aaacccgatgtgctctcctacgcctacggc 23042625 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 305 cccgcgccgctctgccccgccgcgcc 330 |||||||||||||||| ||||||||| Sbjct: 21872366 cccgcgccgctctgcctcgccgcgcc 21872391 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 37 gctcgcgccgagccggccgcccgggc 62 ||||||||||||||||||| |||||| Sbjct: 9239815 gctcgcgccgagccggccggccgggc 9239840
>dbj|AP005908.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1121_A05 Length = 172668 Score = 212 bits (107), Expect = 9e-52 Identities = 206/239 (86%) Strand = Plus / Plus Query: 322 cgccgcgccttcgtcatcgcgcgggccggcggcgagtcccacgagctccgtgtcgacgta 381 |||||||| ||||||||||| || |||||||||||||||||||||||||| |||||||| Sbjct: 117873 cgccgcgcgttcgtcatcgcccgcgccggcggcgagtcccacgagctccgcgtcgacgtc 117932 Query: 382 accaacgccgcggcgccgtccgtcctcgctcacgccatccaccacggggccggcttcccg 441 |||||||| | | |||||||||||| | |||||| |||||| ||| |||||||||||| Sbjct: 117933 gccaacgcctcctccccgtccgtcctctcgcacgccgtccaccgcggcgccggcttcccg 117992 Query: 442 attctcactctggaggagcagttcgcggcggtggcgctgccgcccgcgcacccgccgttc 501 | || || ||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 117993 acgctgacgctggaggagcagttcgcggcggtggcgctgccgccgaagcacccgccgttc 118052 Query: 502 atcgaatccgtgcgccggcgcggcgtcgacatggccgacgtcctctgcgccgcgttccc 560 | || || ||||| |||||||| || ||||||| |||||| |||||||| | |||||| Sbjct: 118053 gtggagtcggtgcggcggcgcggggtggacatggacgacgtgctctgcgcggtgttccc 118111 Score = 131 bits (66), Expect = 3e-27 Identities = 129/150 (86%) Strand = Plus / Plus Query: 139 cacccgttcgacccgctctctccggcggagctcaccgccgtgcgcgacgccgtgctcgcc 198 |||||| ||||||| ||||| | || ||||| |||||||| |||| ||| ||||||||| Sbjct: 117690 cacccgctcgaccccctctccgccgccgagcttaccgccgtccgcgccgcggtgctcgcc 117749 Query: 199 tcgccactggtcccagcccgcccgctcaccttccactacgtcggcctcgacgagcccgat 258 || || || ||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117750 tccccgctcgtcccggcccgcccgctcaccttccactacgtcggcctcgacgagcccgac 117809 Query: 259 aagcctgacgtcctattctacgcctacggc 288 || || || || || | ||||||||||||| Sbjct: 117810 aaacccgatgtgctctcctacgcctacggc 117839
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 107 bits (54), Expect = 4e-20 Identities = 123/146 (84%) Strand = Plus / Plus Query: 139 cacccgttcgacccgctctctccggcggagctcaccgccgtgcgcgacgccgtgctcgcc 198 |||||| ||||||||||| | | ||||| |||||||| | |||| ||||||||||||| Sbjct: 13319471 cacccgctcgacccgctcaccgccacggagatcaccgccatccgcgccgccgtgctcgcc 13319530 Query: 199 tcgccactggtcccagcccgcccgctcaccttccactacgtcggcctcgacgagcccgat 258 || || || || || ||||||||||| ||||||||||||||||||||||||||| || Sbjct: 13319531 tccccgctcgtgccggcccgcccgcttttcttccactacgtcggcctcgacgagcctgac 13319590 Query: 259 aagcctgacgtcctattctacgccta 284 ||||| |||||||| | ||||||||| Sbjct: 13319591 aagccggacgtcctctcctacgccta 13319616 Score = 93.7 bits (47), Expect = 6e-16 Identities = 189/235 (80%), Gaps = 1/235 (0%) Strand = Plus / Plus Query: 326 gcgccttcgtcatcgcgcgggccggcggcgagtcccacgagctccgtgtcgacgtaacca 385 |||| ||| ||||||| || ||||||||||| |||||||||||||| ||| || | | | Sbjct: 23066314 gcgcgttcatcatcgcccgcgccggcggcgaatcccacgagctccgcgtcaacattgcta 23066373 Query: 386 acgccgcggcgccgtccgtcctcgctcacgccatccaccacggggccggcttcccgattc 445 ||||| | || | ||||||||| |||||| | |||||| | | |||| | |||||| | Sbjct: 23066374 acgcctcctcggcatccgtcctctctcacgtcgtccaccgcagcgccgccctcccgacgc 23066433 Query: 446 tcactctggaggagcagttcgcggcggtggcgctgccgcccgcgcacccgccgttcatcg 505 | || |||||||||||||||| | || ||||||||||||| ||||||||||||| | | Sbjct: 23066434 tgacactggaggagcagttcgtgacgctggcgctgccgccgaagcacccgccgttcgtgg 23066493 Query: 506 aatccgtgcgccggcgcggcgtcgacatggccgacgtcctctgcgccgcgttccc 560 | || ||||| ||| |||| || ||||||| |||||| |||||||| | |||||| Sbjct: 23066494 agtcggtgcg-cggtgcggggtggacatggacgacgtgctctgcgcggtgttccc 23066547 Score = 69.9 bits (35), Expect = 9e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 316 ctgccccgccgcgccttcgtcatcgcgcgggccggcggcgagtcccacgag 366 ||||| |||||||| |||||||||||||||||||||||| |||| |||||| Sbjct: 13319657 ctgccgcgccgcgcgttcgtcatcgcgcgggccggcggccagtcgcacgag 13319707 Score = 46.1 bits (23), Expect = 0.12 Identities = 101/127 (79%) Strand = Plus / Plus Query: 398 cgtccgtcctcgctcacgccatccaccacggggccggcttcccgattctcactctggagg 457 ||||||| ||| | |||||| |||||| |||| ||||||||||||| |||| |||| Sbjct: 13319736 cgtccgtgctctcgcacgccgtccaccgcgggcccggcttcccgatgttcacggacgagg 13319795 Query: 458 agcagttcgcggcggtggcgctgccgcccgcgcacccgccgttcatcgaatccgtgcgcc 517 | ||| ||||||| ||||||||||| | || |||| |||||| | || ||||| || | Sbjct: 13319796 accagatcgcggccatggcgctgccgtacacgtacccaccgttcgtggagtccgtccggc 13319855 Query: 518 ggcgcgg 524 ||||||| Sbjct: 13319856 ggcgcgg 13319862
>dbj|AP005449.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0427E01 Length = 146395 Score = 107 bits (54), Expect = 4e-20 Identities = 123/146 (84%) Strand = Plus / Plus Query: 139 cacccgttcgacccgctctctccggcggagctcaccgccgtgcgcgacgccgtgctcgcc 198 |||||| ||||||||||| | | ||||| |||||||| | |||| ||||||||||||| Sbjct: 81281 cacccgctcgacccgctcaccgccacggagatcaccgccatccgcgccgccgtgctcgcc 81340 Query: 199 tcgccactggtcccagcccgcccgctcaccttccactacgtcggcctcgacgagcccgat 258 || || || || || ||||||||||| ||||||||||||||||||||||||||| || Sbjct: 81341 tccccgctcgtgccggcccgcccgcttttcttccactacgtcggcctcgacgagcctgac 81400 Query: 259 aagcctgacgtcctattctacgccta 284 ||||| |||||||| | ||||||||| Sbjct: 81401 aagccggacgtcctctcctacgccta 81426 Score = 69.9 bits (35), Expect = 9e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 316 ctgccccgccgcgccttcgtcatcgcgcgggccggcggcgagtcccacgag 366 ||||| |||||||| |||||||||||||||||||||||| |||| |||||| Sbjct: 81467 ctgccgcgccgcgcgttcgtcatcgcgcgggccggcggccagtcgcacgag 81517 Score = 46.1 bits (23), Expect = 0.12 Identities = 101/127 (79%) Strand = Plus / Plus Query: 398 cgtccgtcctcgctcacgccatccaccacggggccggcttcccgattctcactctggagg 457 ||||||| ||| | |||||| |||||| |||| ||||||||||||| |||| |||| Sbjct: 81546 cgtccgtgctctcgcacgccgtccaccgcgggcccggcttcccgatgttcacggacgagg 81605 Query: 458 agcagttcgcggcggtggcgctgccgcccgcgcacccgccgttcatcgaatccgtgcgcc 517 | ||| ||||||| ||||||||||| | || |||| |||||| | || ||||| || | Sbjct: 81606 accagatcgcggccatggcgctgccgtacacgtacccaccgttcgtggagtccgtccggc 81665 Query: 518 ggcgcgg 524 ||||||| Sbjct: 81666 ggcgcgg 81672
>dbj|AK067262.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013095P11, full insert sequence Length = 2329 Score = 107 bits (54), Expect = 4e-20 Identities = 123/146 (84%) Strand = Plus / Plus Query: 139 cacccgttcgacccgctctctccggcggagctcaccgccgtgcgcgacgccgtgctcgcc 198 |||||| ||||||||||| | | ||||| |||||||| | |||| ||||||||||||| Sbjct: 189 cacccgctcgacccgctcaccgccacggagatcaccgccatccgcgccgccgtgctcgcc 248 Query: 199 tcgccactggtcccagcccgcccgctcaccttccactacgtcggcctcgacgagcccgat 258 || || || || || ||||||||||| ||||||||||||||||||||||||||| || Sbjct: 249 tccccgctcgtgccggcccgcccgcttttcttccactacgtcggcctcgacgagcctgac 308 Query: 259 aagcctgacgtcctattctacgccta 284 ||||| |||||||| | ||||||||| Sbjct: 309 aagccggacgtcctctcctacgccta 334 Score = 69.9 bits (35), Expect = 9e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 316 ctgccccgccgcgccttcgtcatcgcgcgggccggcggcgagtcccacgag 366 ||||| |||||||| |||||||||||||||||||||||| |||| |||||| Sbjct: 375 ctgccgcgccgcgcgttcgtcatcgcgcgggccggcggccagtcgcacgag 425 Score = 46.1 bits (23), Expect = 0.12 Identities = 101/127 (79%) Strand = Plus / Plus Query: 398 cgtccgtcctcgctcacgccatccaccacggggccggcttcccgattctcactctggagg 457 ||||||| ||| | |||||| |||||| |||| ||||||||||||| |||| |||| Sbjct: 454 cgtccgtgctctcgcacgccgtccaccgcgggcccggcttcccgatgttcacggacgagg 513 Query: 458 agcagttcgcggcggtggcgctgccgcccgcgcacccgccgttcatcgaatccgtgcgcc 517 | ||| ||||||| ||||||||||| | || |||| |||||| | || ||||| || | Sbjct: 514 accagatcgcggccatggcgctgccgtacacgtacccaccgttcgtggagtccgtccggc 573 Query: 518 ggcgcgg 524 ||||||| Sbjct: 574 ggcgcgg 580
>dbj|AP004571.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0652A05 Length = 150455 Score = 93.7 bits (47), Expect = 6e-16 Identities = 189/235 (80%), Gaps = 1/235 (0%) Strand = Plus / Plus Query: 326 gcgccttcgtcatcgcgcgggccggcggcgagtcccacgagctccgtgtcgacgtaacca 385 |||| ||| ||||||| || ||||||||||| |||||||||||||| ||| || | | | Sbjct: 132858 gcgcgttcatcatcgcccgcgccggcggcgaatcccacgagctccgcgtcaacattgcta 132917 Query: 386 acgccgcggcgccgtccgtcctcgctcacgccatccaccacggggccggcttcccgattc 445 ||||| | || | ||||||||| |||||| | |||||| | | |||| | |||||| | Sbjct: 132918 acgcctcctcggcatccgtcctctctcacgtcgtccaccgcagcgccgccctcccgacgc 132977 Query: 446 tcactctggaggagcagttcgcggcggtggcgctgccgcccgcgcacccgccgttcatcg 505 | || |||||||||||||||| | || ||||||||||||| ||||||||||||| | | Sbjct: 132978 tgacactggaggagcagttcgtgacgctggcgctgccgccgaagcacccgccgttcgtgg 133037 Query: 506 aatccgtgcgccggcgcggcgtcgacatggccgacgtcctctgcgccgcgttccc 560 | || ||||| ||| |||| || ||||||| |||||| |||||||| | |||||| Sbjct: 133038 agtcggtgcg-cggtgcggggtggacatggacgacgtgctctgcgcggtgttccc 133091
>dbj|AP004236.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0417D05 Length = 165752 Score = 93.7 bits (47), Expect = 6e-16 Identities = 189/235 (80%), Gaps = 1/235 (0%) Strand = Plus / Plus Query: 326 gcgccttcgtcatcgcgcgggccggcggcgagtcccacgagctccgtgtcgacgtaacca 385 |||| ||| ||||||| || ||||||||||| |||||||||||||| ||| || | | | Sbjct: 16962 gcgcgttcatcatcgcccgcgccggcggcgaatcccacgagctccgcgtcaacattgcta 17021 Query: 386 acgccgcggcgccgtccgtcctcgctcacgccatccaccacggggccggcttcccgattc 445 ||||| | || | ||||||||| |||||| | |||||| | | |||| | |||||| | Sbjct: 17022 acgcctcctcggcatccgtcctctctcacgtcgtccaccgcagcgccgccctcccgacgc 17081 Query: 446 tcactctggaggagcagttcgcggcggtggcgctgccgcccgcgcacccgccgttcatcg 505 | || |||||||||||||||| | || ||||||||||||| ||||||||||||| | | Sbjct: 17082 tgacactggaggagcagttcgtgacgctggcgctgccgccgaagcacccgccgttcgtgg 17141 Query: 506 aatccgtgcgccggcgcggcgtcgacatggccgacgtcctctgcgccgcgttccc 560 | || ||||| ||| |||| || ||||||| |||||| |||||||| | |||||| Sbjct: 17142 agtcggtgcg-cggtgcggggtggacatggacgacgtgctctgcgcggtgttccc 17195
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 69.9 bits (35), Expect = 9e-09 Identities = 122/151 (80%) Strand = Plus / Minus Query: 350 gcggcgagtcccacgagctccgtgtcgacgtaaccaacgccgcggcgccgtccgtcctcg 409 ||||||||||||| ||||| || ||||| || |||||||| | || | ||||||||| Sbjct: 15947041 gcggcgagtcccatgagcttcgcgtcgatgtctccaacgcctcctcggcatccgtcctct 15946982 Query: 410 ctcacgccatccaccacggggccggcttcccgattctcactctggaggagcagttcgcgg 469 ||||||||||||||| ||| || ||||||| || || | ||||||||||||||| || Sbjct: 15946981 ctcacgccatccaccgcggcgctggcttcctgacgctgatgttggaggagcagttcgtgg 15946922 Query: 470 cggtggcgctgccgcccgcgcacccgccgtt 500 ||||||||| || || |||||||||||| Sbjct: 15946921 aggtggcgctaccaccgaagcacccgccgtt 15946891
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 69.9 bits (35), Expect = 9e-09 Identities = 122/151 (80%) Strand = Plus / Minus Query: 350 gcggcgagtcccacgagctccgtgtcgacgtaaccaacgccgcggcgccgtccgtcctcg 409 ||||||||||||| ||||| || ||||| || |||||||| | || | ||||||||| Sbjct: 15900274 gcggcgagtcccatgagcttcgcgtcgatgtctccaacgcctcctcggcatccgtcctct 15900215 Query: 410 ctcacgccatccaccacggggccggcttcccgattctcactctggaggagcagttcgcgg 469 ||||||||||||||| ||| || ||||||| || || | ||||||||||||||| || Sbjct: 15900214 ctcacgccatccaccgcggcgctggcttcctgacgctgatgttggaggagcagttcgtgg 15900155 Query: 470 cggtggcgctgccgcccgcgcacccgccgtt 500 ||||||||| || || |||||||||||| Sbjct: 15900154 aggtggcgctaccaccgaagcacccgccgtt 15900124
>emb|AL772415.6|CNS08C9T Oryza sativa chromosome 12, . BAC OSJNBa0060H23 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 153350 Score = 69.9 bits (35), Expect = 9e-09 Identities = 122/151 (80%) Strand = Plus / Minus Query: 350 gcggcgagtcccacgagctccgtgtcgacgtaaccaacgccgcggcgccgtccgtcctcg 409 ||||||||||||| ||||| || ||||| || |||||||| | || | ||||||||| Sbjct: 14454 gcggcgagtcccatgagcttcgcgtcgatgtctccaacgcctcctcggcatccgtcctct 14395 Query: 410 ctcacgccatccaccacggggccggcttcccgattctcactctggaggagcagttcgcgg 469 ||||||||||||||| ||| || ||||||| || || | ||||||||||||||| || Sbjct: 14394 ctcacgccatccaccgcggcgctggcttcctgacgctgatgttggaggagcagttcgtgg 14335 Query: 470 cggtggcgctgccgcccgcgcacccgccgtt 500 ||||||||| || || |||||||||||| Sbjct: 14334 aggtggcgctaccaccgaagcacccgccgtt 14304
>gb|AC133006.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0072N24 map C61883S, complete sequence Length = 163337 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 456 ggagcagttcgcggcggtggcgctgccgcccgcgcacccgccgtt 500 ||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 67480 ggagcagttcgcggcagtggcgctgccgccgaagcacccgccgtt 67524 Score = 42.1 bits (21), Expect = 1.9 Identities = 57/69 (82%) Strand = Plus / Plus Query: 322 cgccgcgccttcgtcatcgcgcgggccggcggcgagtcccacgagctccgtgtcgacgta 381 ||||| || ||||||||||| | |||||||| || ||||||||||||| |||| || Sbjct: 67349 cgccgtgcgttcgtcatcgcccacaccggcggcaagccccacgagctccgcttcgatgtc 67408 Query: 382 accaacgcc 390 ||||||||| Sbjct: 67409 accaacgcc 67417
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 456 ggagcagttcgcggcggtggcgctgccgcccgcgcacccgccgtt 500 ||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 9973699 ggagcagttcgcggcagtggcgctgccgccgaagcacccgccgtt 9973743 Score = 42.1 bits (21), Expect = 1.9 Identities = 57/69 (82%) Strand = Plus / Plus Query: 322 cgccgcgccttcgtcatcgcgcgggccggcggcgagtcccacgagctccgtgtcgacgta 381 ||||| || ||||||||||| | |||||||| || ||||||||||||| |||| || Sbjct: 9973568 cgccgtgcgttcgtcatcgcccacaccggcggcaagccccacgagctccgcttcgatgtc 9973627 Query: 382 accaacgcc 390 ||||||||| Sbjct: 9973628 accaacgcc 9973636
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 456 ggagcagttcgcggcggtggcgctgccgcccgcgcacccgccgtt 500 ||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 10045396 ggagcagttcgcggcagtggcgctgccgccgaagcacccgccgtt 10045440 Score = 42.1 bits (21), Expect = 1.9 Identities = 57/69 (82%) Strand = Plus / Plus Query: 322 cgccgcgccttcgtcatcgcgcgggccggcggcgagtcccacgagctccgtgtcgacgta 381 ||||| || ||||||||||| | |||||||| || ||||||||||||| |||| || Sbjct: 10045265 cgccgtgcgttcgtcatcgcccacaccggcggcaagccccacgagctccgcttcgatgtc 10045324 Query: 382 accaacgcc 390 ||||||||| Sbjct: 10045325 accaacgcc 10045333
>ref|XM_583937.2| PREDICTED: Bos taurus similar to Homeobox protein GBX-2 (Gastrulation and brain-specific homeobox protein 2), transcript variant 1 (LOC507344), mRNA Length = 1535 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 474 ggcgctgccgcccgcgcacccgc 496 ||||||||||||||||||||||| Sbjct: 452 ggcgctgccgcccgcgcacccgc 474
>ref|XM_872605.1| PREDICTED: Bos taurus similar to Homeobox protein GBX-2 (Gastrulation and brain-specific homeobox protein 2), transcript variant 2 (LOC507344), mRNA Length = 1274 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 474 ggcgctgccgcccgcgcacccgc 496 ||||||||||||||||||||||| Sbjct: 452 ggcgctgccgcccgcgcacccgc 474
>ref|XM_478659.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1413 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Minus Query: 305 cccgcgccgctctgccccgccgcgcc 330 |||||||||||||||| ||||||||| Sbjct: 758 cccgcgccgctctgcctcgccgcgcc 733
>emb|AL591783.1|SME591783 Sinorhizobium meliloti 1021 complete chromosome; segment 2/12 Length = 306650 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 516 ccggcgcggcgtcgacatggcc 537 |||||||||||||||||||||| Sbjct: 254982 ccggcgcggcgtcgacatggcc 254961
>emb|Y08500.1|RMPUTA R.meliloti putA gene Length = 3804 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 516 ccggcgcggcgtcgacatggcc 537 |||||||||||||||||||||| Sbjct: 669 ccggcgcggcgtcgacatggcc 690
>gb|AC154683.2| Mus musculus BAC clone RP23-142O4 from chromosome 14, complete sequence Length = 219067 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 291 ctccacctcctcctcccgcgcc 312 |||||||||||||||||||||| Sbjct: 17836 ctccacctcctcctcccgcgcc 17815
>gb|AE005870.1| Caulobacter crescentus CB15 section 196 of 359 of the complete genome Length = 11934 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 48 gccggccgcccgggcgccgctc 69 |||||||||||||||||||||| Sbjct: 11073 gccggccgcccgggcgccgctc 11052
>dbj|AK051032.1| Mus musculus 9 days embryo whole body cDNA, RIKEN full-length enriched library, clone:D030057J08 product:Zic family member 2 (odd-paired homolog, Drosophila), full insert sequence Length = 2617 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 291 ctccacctcctcctcccgcgcc 312 |||||||||||||||||||||| Sbjct: 38 ctccacctcctcctcccgcgcc 59
>dbj|AP004304.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0483E06 Length = 159035 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 37 gctcgcgccgagccggccgcccgggc 62 ||||||||||||||||||| |||||| Sbjct: 2659 gctcgcgccgagccggccggccgggc 2684
>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome Length = 3147090 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Minus Query: 281 cctacggcaactccacctcctcctcc 306 ||||||||||||||||||| |||||| Sbjct: 2713129 cctacggcaactccacctcatcctcc 2713104
>dbj|AP005307.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0046D03 Length = 150554 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 37 gctcgcgccgagccggccgcccgggc 62 ||||||||||||||||||| |||||| Sbjct: 122688 gctcgcgccgagccggccggccgggc 122713
>gb|AC144798.4| Mus musculus BAC clone RP24-364A24 from 14, complete sequence Length = 159766 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 291 ctccacctcctcctcccgcgcc 312 |||||||||||||||||||||| Sbjct: 80207 ctccacctcctcctcccgcgcc 80186
>dbj|AP005126.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0041B22 Length = 142446 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 305 cccgcgccgctctgccccgccgcgcc 330 |||||||||||||||| ||||||||| Sbjct: 86042 cccgcgccgctctgcctcgccgcgcc 86067
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Minus Query: 173 ccgccgtgcgcgacgccgtgctcgcc 198 |||||||||||||||||| ||||||| Sbjct: 2753586 ccgccgtgcgcgacgccgcgctcgcc 2753561
>gb|AE010424.1| Methanopyrus kandleri AV19 section 123 of 157 of the complete genome Length = 11138 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 133 catccgcacccgttcgacccg 153 ||||||||||||||||||||| Sbjct: 3812 catccgcacccgttcgacccg 3832
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 464 tcgcggcggtggcgctgccgc 484 ||||||||||||||||||||| Sbjct: 1448459 tcgcggcggtggcgctgccgc 1448439
>ref|XM_582570.2| PREDICTED: Bos taurus hypothetical LOC506160 (LOC506160), mRNA Length = 1815 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 466 gcggcggtggcgctgccgcccgcgc 490 ||||||| ||||||||||||||||| Sbjct: 62 gcggcggcggcgctgccgcccgcgc 38
>gb|AY261359.1| Bovine herpesvirus 5 strain SV507/99, complete genome Length = 138390 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 463 ttcgcggcggtggcgctgccg 483 ||||||||||||||||||||| Sbjct: 70932 ttcgcggcggtggcgctgccg 70952
>gb|AF293355.2| Streptomyces collinus DSM2012 rubrinomycin gene cluster, complete sequence Length = 32634 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 37 gctcgcgccgagccggccgcccggg 61 |||||||||||||| |||||||||| Sbjct: 11781 gctcgcgccgagcctgccgcccggg 11757
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 464 tcgcggcggtggcgctgccgc 484 ||||||||||||||||||||| Sbjct: 4758789 tcgcggcggtggcgctgccgc 4758769 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 462 gttcgcggcggtggcgctgccgcccgcgc 490 ||||||||||||||| |||||||| |||| Sbjct: 109032 gttcgcggcggtggccctgccgccggcgc 109060 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 463 ttcgcggcggtggcgctgccgcccgcgc 490 ||||||||||||||||||| || ||||| Sbjct: 4365951 ttcgcggcggtggcgctgcggcacgcgc 4365978 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 37 gctcgcgccgagccggccgcccgggcgc 64 |||||||||| ||||||||||| ||||| Sbjct: 2329005 gctcgcgccgggccggccgccctggcgc 2329032
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 414 cgccatccaccacggggccgg 434 ||||||||||||||||||||| Sbjct: 40247 cgccatccaccacggggccgg 40227 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 327 cgccttcgtcatcgcgcgggccgg 350 |||||||||| ||||||||||||| Sbjct: 4954293 cgccttcgtcgtcgcgcgggccgg 4954270 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 133 catccgcacccgttcgacccgctc 156 |||||||||||| ||||||||||| Sbjct: 1731728 catccgcacccgctcgacccgctc 1731751
>ref|NM_014015.3| Homo sapiens dexamethasone-induced transcript (DEXI), mRNA Length = 1580 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 48 gccggccgcccgggcgccgc 67 |||||||||||||||||||| Sbjct: 325 gccggccgcccgggcgccgc 344
>ref|NM_104462.2| Arabidopsis thaliana ATCSLE1; cellulose synthase/ transferase, transferring glycosyl groups AT1G55850 (ATCSLE1) mRNA, complete cds Length = 2309 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 94 gccgccgtctcaatcctcgccgcc 117 |||||||| ||||||||||||||| Sbjct: 709 gccgccgtttcaatcctcgccgcc 686
>ref|XM_510814.1| PREDICTED: Pan troglodytes similar to dexamethasone-induced protein (LOC453917), mRNA Length = 775 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 48 gccggccgcccgggcgccgc 67 |||||||||||||||||||| Sbjct: 373 gccggccgcccgggcgccgc 392
>ref|XM_469835.1| Oryza sativa (japonica cultivar-group), mRNA Length = 945 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 291 ctccacctcctcctcccgcgccgc 314 |||| ||||||||||||||||||| Sbjct: 189 ctcctcctcctcctcccgcgccgc 166
>ref|NM_193720.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 477 Score = 40.1 bits (20), Expect = 7.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 88 ctcctggccgccgtctcaatcctcgccgccgc 119 ||||||||||||||| | | |||||||||||| Sbjct: 54 ctcctggccgccgtcgccagcctcgccgccgc 23
>gb|AC125735.1| Leishmania major strain Friedlin chromosome 3, complete sequence Length = 384518 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 109 ctcgccgccgcggcatccac 128 |||||||||||||||||||| Sbjct: 205355 ctcgccgccgcggcatccac 205336
>ref|XM_615823.2| PREDICTED: Bos taurus similar to transient receptor potential cation channel, subfamily M, member 7 (LOC535713), mRNA Length = 2613 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 gcaactccacctcctcctcc 306 |||||||||||||||||||| Sbjct: 177 gcaactccacctcctcctcc 158
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 339 cgcgcgggccggcggcgagt 358 |||||||||||||||||||| Sbjct: 1468377 cgcgcgggccggcggcgagt 1468396
>gb|AY973258.1| Leishmania major elongation factor1-alpha mRNA, complete cds Length = 1350 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 522 cggcgtcgacatggccgacg 541 |||||||||||||||||||| Sbjct: 55 cggcgtcgacatggccgacg 36
>ref|XM_362957.1| Magnaporthe grisea 70-15 hypothetical protein (MG08480.4) partial cds Length = 876 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 107 tcctcgccgccgcggcatcc 126 |||||||||||||||||||| Sbjct: 23 tcctcgccgccgcggcatcc 42
>gb|BC001083.2| Homo sapiens dexamethasone-induced transcript, mRNA (cDNA clone MGC:2765 IMAGE:2958243), complete cds Length = 1261 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 48 gccggccgcccgggcgccgc 67 |||||||||||||||||||| Sbjct: 61 gccggccgcccgggcgccgc 80
>gb|BC052989.1| Homo sapiens dexamethasone-induced transcript, mRNA (cDNA clone MGC:60202 IMAGE:6194689), complete cds Length = 1343 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 48 gccggccgcccgggcgccgc 67 |||||||||||||||||||| Sbjct: 58 gccggccgcccgggcgccgc 77
>gb|BC037569.1| Homo sapiens dexamethasone-induced transcript, mRNA (cDNA clone MGC:44946 IMAGE:5227606), complete cds Length = 1580 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 48 gccggccgcccgggcgccgc 67 |||||||||||||||||||| Sbjct: 325 gccggccgcccgggcgccgc 344
>gb|BC017551.1| Mus musculus dexamethasone-induced transcript, mRNA (cDNA clone MGC:28993 IMAGE:4910742), complete cds Length = 1404 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 48 gccggccgcccgggcgccgc 67 |||||||||||||||||||| Sbjct: 278 gccggccgcccgggcgccgc 297
>gb|BC071233.1| Mus musculus presenilin 1, mRNA (cDNA clone MGC:78198 IMAGE:3673609), complete cds Length = 2750 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 45 cgagccggccgcccgggcgc 64 |||||||||||||||||||| Sbjct: 80 cgagccggccgcccgggcgc 99
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 465 cgcggcggtggcgctgccgcccgc 488 ||||||||| |||||||||||||| Sbjct: 2374104 cgcggcggtcgcgctgccgcccgc 2374081
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 291 ctccacctcctcctcccgcgccgc 314 |||| ||||||||||||||||||| Sbjct: 31022721 ctcctcctcctcctcccgcgccgc 31022744 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 291 ctccacctcctcctcccgcgccgc 314 |||| ||||||||||||||||||| Sbjct: 5577332 ctcctcctcctcctcccgcgccgc 5577309
>ref|XM_857720.1| PREDICTED: Canis familiaris similar to transient receptor potential cation channel, subfamily M, member 7, transcript variant 5 (LOC478300), mRNA Length = 6092 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 gcaactccacctcctcctcc 306 |||||||||||||||||||| Sbjct: 177 gcaactccacctcctcctcc 158
>ref|XM_857698.1| PREDICTED: Canis familiaris similar to transient receptor potential cation channel, subfamily M, member 7, transcript variant 4 (LOC478300), mRNA Length = 6140 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 gcaactccacctcctcctcc 306 |||||||||||||||||||| Sbjct: 177 gcaactccacctcctcctcc 158
>ref|XM_535475.2| PREDICTED: Canis familiaris similar to transient receptor potential cation channel, subfamily M, member 7, transcript variant 1 (LOC478300), mRNA Length = 7211 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 gcaactccacctcctcctcc 306 |||||||||||||||||||| Sbjct: 228 gcaactccacctcctcctcc 209
>gb|AF346629.2| Homo sapiens channel-kinase 1 (CHAK1) mRNA, complete cds Length = 7226 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 gcaactccacctcctcctcc 306 |||||||||||||||||||| Sbjct: 208 gcaactccacctcctcctcc 189
>gb|AC122352.4| Mus musculus BAC clone RP23-389C11 from chromosome 16, complete sequence Length = 196519 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 48 gccggccgcccgggcgccgc 67 |||||||||||||||||||| Sbjct: 138655 gccggccgcccgggcgccgc 138636
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 200 cgccactggtcccagcccgc 219 |||||||||||||||||||| Sbjct: 2554322 cgccactggtcccagcccgc 2554341
>gb|AC122206.4| Mus musculus BAC clone RP23-77G15 from 8, complete sequence Length = 204149 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 17 tctccttcatccaagcctca 36 |||||||||||||||||||| Sbjct: 152334 tctccttcatccaagcctca 152315
>ref|XM_847339.1| PREDICTED: Canis familiaris similar to MYLE protein (Dexamethasone-induced protein) (LOC609975), mRNA Length = 738 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 48 gccggccgcccgggcgccgc 67 |||||||||||||||||||| Sbjct: 380 gccggccgcccgggcgccgc 399
>gb|AC079887.17| Oryza sativa (japonica cultivar-group) chromosome 3 BAC OSJNBa0040E01 genomic sequence, complete sequence Length = 168759 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 291 ctccacctcctcctcccgcgccgc 314 |||| ||||||||||||||||||| Sbjct: 73343 ctcctcctcctcctcccgcgccgc 73320
>gb|BC030409.1| Mus musculus presenilin 1, mRNA (cDNA clone MGC:40637 IMAGE:5133302), complete cds Length = 2016 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 45 cgagccggccgcccgggcgc 64 |||||||||||||||||||| Sbjct: 16 cgagccggccgcccgggcgc 35
>gb|BC014744.1| Mus musculus presenilin 1, mRNA (cDNA clone MGC:25288 IMAGE:4511140), complete cds Length = 1982 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 45 cgagccggccgcccgggcgc 64 |||||||||||||||||||| Sbjct: 92 cgagccggccgcccgggcgc 111
>gb|AC055772.16| Mus musculus chromosome 12, clone RP23-291K4, complete sequence Length = 168350 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 45 cgagccggccgcccgggcgc 64 |||||||||||||||||||| Sbjct: 43921 cgagccggccgcccgggcgc 43902
>ref|XM_660566.1| Cryptosporidium hominis TU502 poly(A) binding protein II (Chro.60057) partial mRNA Length = 792 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 288 caactccacctcctcctccc 307 |||||||||||||||||||| Sbjct: 751 caactccacctcctcctccc 732
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 cgacgatgatcgtctccttc 24 |||||||||||||||||||| Sbjct: 3722908 cgacgatgatcgtctccttc 3722927
>gb|AY341859.1| Oryza sativa (japonica cultivar-group) WRKY19 mRNA, complete cds Length = 1276 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 291 ctccacctcctcctcccgcgccgc 314 |||| ||||||||||||||||||| Sbjct: 284 ctcctcctcctcctcccgcgccgc 261
>emb|AL355338.33| Human DNA sequence from clone RP11-12G12 on chromosome 13 Contains the gene for zinc finger protein of the cerebellum 5 (ZIC5), the ZIC2 gene for Zic family member 2 (odd-paired homolog Drosophila), a 13kDa differentiation-associated protein (DAP13) pseudogene, an asparagine synthetase (ASNS) pseudogene, the 5' end of the PCCA gene for propionyl Coenzyme A carboxylase alpha polypeptide and seven CpG islands, complete sequence Length = 153762 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 291 ctccacctcctcctcccgcgccgc 314 |||| ||||||||||||||||||| Sbjct: 42108 ctcctcctcctcctcccgcgccgc 42131
>gb|AY064040.1| Arabidopsis thaliana putative cellulose synthase catalytic subunit (At1g55850) mRNA, complete cds Length = 2326 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 94 gccgccgtctcaatcctcgccgcc 117 |||||||| ||||||||||||||| Sbjct: 709 gccgccgtttcaatcctcgccgcc 686
>emb|BX649209.1| Mycobacterium ulcerans plasmid pMUM001, complete plasmid genome Length = 174155 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 509 ccgtgcgccggcgcggcgtc 528 |||||||||||||||||||| Sbjct: 174070 ccgtgcgccggcgcggcgtc 174089
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 465 cgcggcggtggcgctgccgcccgc 488 ||||||||| |||||||||||||| Sbjct: 554194 cgcggcggtcgcgctgccgcccgc 554171
>gb|AF521085.1| Streptomyces nanchangensis NS3226 polyether ionophore nanchangmycin biosynthetic gene cluster, complete sequence Length = 132544 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 111 cgccgccgcggcatccaccc 130 |||||||||||||||||||| Sbjct: 72778 cgccgccgcggcatccaccc 72759
>gb|AC132214.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0040M05, from chromosome 3, complete sequence Length = 153126 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 291 ctccacctcctcctcccgcgccgc 314 |||| ||||||||||||||||||| Sbjct: 120864 ctcctcctcctcctcccgcgccgc 120841
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 agatcgacgatgatcgtctc 20 |||||||||||||||||||| Sbjct: 4464186 agatcgacgatgatcgtctc 4464205
>gb|AC126538.1| Homo sapiens chromosome 16 clone CTD-3225F13, complete sequence Length = 188015 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 48 gccggccgcccgggcgccgc 67 |||||||||||||||||||| Sbjct: 110477 gccggccgcccgggcgccgc 110496
>emb|CR611608.1| full-length cDNA clone CS0DE005YI16 of Placenta of Homo sapiens (human) Length = 1469 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 48 gccggccgcccgggcgccgc 67 |||||||||||||||||||| Sbjct: 307 gccggccgcccgggcgccgc 326
>emb|CR607364.1| full-length cDNA clone CS0DL008YH17 of B cells (Ramos cell line) Cot 25-normalized of Homo sapiens (human) Length = 1496 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 48 gccggccgcccgggcgccgc 67 |||||||||||||||||||| Sbjct: 360 gccggccgcccgggcgccgc 379
>emb|CR599313.1| full-length cDNA clone CS0DI067YF10 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1502 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 48 gccggccgcccgggcgccgc 67 |||||||||||||||||||| Sbjct: 355 gccggccgcccgggcgccgc 374
>emb|CR596795.1| full-length cDNA clone CS0DC018YI07 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1531 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 48 gccggccgcccgggcgccgc 67 |||||||||||||||||||| Sbjct: 384 gccggccgcccgggcgccgc 403
>dbj|AK055529.1| Homo sapiens cDNA FLJ30967 fis, clone HEART2000309, weakly similar to PTB-ASSOCIATED SPLICING FACTOR Length = 2148 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 48 gccggccgcccgggcgccgc 67 |||||||||||||||||||| Sbjct: 1205 gccggccgcccgggcgccgc 1186
>tpg|BK005006.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) WRKY transcription factor 3 (WRKY3) gene, complete cds Length = 3406 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 291 ctccacctcctcctcccgcgccgc 314 |||| ||||||||||||||||||| Sbjct: 189 ctcctcctcctcctcccgcgccgc 166
>emb|CR590912.1| full-length cDNA clone CS0DI040YN02 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1525 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 48 gccggccgcccgggcgccgc 67 |||||||||||||||||||| Sbjct: 385 gccggccgcccgggcgccgc 404
>gb|AF001171.2| Ralstonia solanacearum protein kinase homolog (pehS), PehR (pehR), and N-acetylmuramyl-L-alanine amidase (ampD) genes, complete cds Length = 4909 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 316 ctgccccgccgcgccttcgtcatc 339 ||||| |||||||||||||||||| Sbjct: 2341 ctgccgcgccgcgccttcgtcatc 2364
>dbj|AK134615.1| Mus musculus adult male medulla oblongata cDNA, RIKEN full-length enriched library, clone:6330501K07 product:presenilin 1, full insert sequence Length = 1659 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 45 cgagccggccgcccgggcgc 64 |||||||||||||||||||| Sbjct: 63 cgagccggccgcccgggcgc 82
>dbj|AK134232.1| Mus musculus adult male thymus cDNA, RIKEN full-length enriched library, clone:5830496F04 product:presenilin 1, full insert sequence Length = 2006 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 45 cgagccggccgcccgggcgc 64 |||||||||||||||||||| Sbjct: 24 cgagccggccgcccgggcgc 43
>ref|NM_017672.2| Homo sapiens transient receptor potential cation channel, subfamily M, member 7 (TRPM7), mRNA Length = 7226 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 gcaactccacctcctcctcc 306 |||||||||||||||||||| Sbjct: 208 gcaactccacctcctcctcc 189
>dbj|AK148101.1| Mus musculus B16 F10Y cells cDNA, RIKEN full-length enriched library, clone:G370017B20 product:presenilin 1, full insert sequence Length = 2638 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 45 cgagccggccgcccgggcgc 64 |||||||||||||||||||| Sbjct: 62 cgagccggccgcccgggcgc 81
>gb|CP000264.1| Jannaschia sp. CCS1, complete genome Length = 4317977 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 470 cggtggcgctgccgcccgcg 489 |||||||||||||||||||| Sbjct: 2561313 cggtggcgctgccgcccgcg 2561332
>gb|AC012100.7| Homo sapiens chromosome 15 clone RP11-507J18 map 15q21.1, complete sequence Length = 195068 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 287 gcaactccacctcctcctcc 306 |||||||||||||||||||| Sbjct: 30824 gcaactccacctcctcctcc 30843
>dbj|AK165984.1| Mus musculus lung RCB-0558 LLC cDNA, RIKEN full-length enriched library, clone:G730026B14 product:presenilin 1, full insert sequence Length = 2339 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 45 cgagccggccgcccgggcgc 64 |||||||||||||||||||| Sbjct: 62 cgagccggccgcccgggcgc 81
>gb|AF416379.1|AF416379 Leishmania donovani elongation factor 1-alpha mRNA, partial cds Length = 1347 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 522 cggcgtcgacatggccgacg 541 |||||||||||||||||||| Sbjct: 55 cggcgtcgacatggccgacg 36
>ref|XM_627424.1| Cryptosporidium parvum Iowa II Sgn1p-like protein (cgd6_410), partial mRNA Length = 789 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 288 caactccacctcctcctccc 307 |||||||||||||||||||| Sbjct: 748 caactccacctcctcctccc 729
>dbj|AK032104.1| Mus musculus adult male medulla oblongata cDNA, RIKEN full-length enriched library, clone:6330587M05 product:dexamethasone-induced transcript, full insert sequence Length = 2534 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 48 gccggccgcccgggcgccgc 67 |||||||||||||||||||| Sbjct: 292 gccggccgcccgggcgccgc 311
>gb|AC084756.3|AC084756 Homo sapiens chromosome 15 clone RP11-120K9 map 15q21.2, complete sequence Length = 166138 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 287 gcaactccacctcctcctcc 306 |||||||||||||||||||| Sbjct: 163587 gcaactccacctcctcctcc 163606
>gb|AY032950.1| Homo sapiens LTRPC7 (LTRPC7) mRNA, complete cds Length = 7259 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 gcaactccacctcctcctcc 306 |||||||||||||||||||| Sbjct: 241 gcaactccacctcctcctcc 222
>dbj|AK007644.1| Mus musculus 10 day old male pancreas cDNA, RIKEN full-length enriched library, clone:1810029J14 product:dexamethasone-induced transcript, full insert sequence Length = 1382 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 48 gccggccgcccgggcgccgc 67 |||||||||||||||||||| Sbjct: 292 gccggccgcccgggcgccgc 311
>gb|AY736849.1| Mycobacterium liflandii plasmid pMLMP replication protein gene, complete cds Length = 1478 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 509 ccgtgcgccggcgcggcgtc 528 |||||||||||||||||||| Sbjct: 96 ccgtgcgccggcgcggcgtc 115
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 291 ctccacctcctcctcccgcgccgc 314 |||| ||||||||||||||||||| Sbjct: 31113244 ctcctcctcctcctcccgcgccgc 31113267 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 291 ctccacctcctcctcccgcgccgc 314 |||| ||||||||||||||||||| Sbjct: 5576547 ctcctcctcctcctcccgcgccgc 5576524
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 7.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 88 ctcctggccgccgtctcaatcctcgccgccgc 119 ||||||||||||||| | | |||||||||||| Sbjct: 17686766 ctcctggccgccgtcgccagcctcgccgccgc 17686797
>gb|AC133065.3| Homo sapiens chromosome 16 clone RP11-876N24, complete sequence Length = 142215 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 48 gccggccgcccgggcgccgc 67 |||||||||||||||||||| Sbjct: 121991 gccggccgcccgggcgccgc 121972
>emb|BX816932.1|CNS0AEMG Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH77ZE07 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2102 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 94 gccgccgtctcaatcctcgccgcc 117 |||||||| ||||||||||||||| Sbjct: 688 gccgccgtttcaatcctcgccgcc 665
>gb|AE004565.1| Pseudomonas aeruginosa PAO1, section 126 of 529 of the complete genome Length = 11579 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 471 ggtggcgctgccgcccgcgc 490 |||||||||||||||||||| Sbjct: 11062 ggtggcgctgccgcccgcgc 11043
>gb|AY204467.1| Myxococcus xanthus clone C1164 hypothetical protein gene, partial cds; AgmH (agmH), hypothetical protein, and putative receptor protein genes, complete cds; and GTPase regulator gene, partial cds Length = 4328 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 387 cgccgcggcgccgtccgtcctcgc 410 |||||||||| ||||||||||||| Sbjct: 814 cgccgcggcgtcgtccgtcctcgc 791
>ref|XM_346072.2| PREDICTED: Rattus norvegicus gastrulation brain homeobox 2 (Gbx2), mRNA Length = 1317 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 475 gcgctgccgcccgcgcaccc 494 |||||||||||||||||||| Sbjct: 255 gcgctgccgcccgcgcaccc 274
>gb|AC105928.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0014O06, complete sequence Length = 168031 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 291 ctccacctcctcctcccgcgccgc 314 |||| ||||||||||||||||||| Sbjct: 41031 ctcctcctcctcctcccgcgccgc 41008
>gb|AC002304.3|AC002304 Genomic sequence for Arabidopsis thaliana BAC F14J16 from chromosome I, complete sequence Length = 106320 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 94 gccgccgtctcaatcctcgccgcc 117 |||||||| ||||||||||||||| Sbjct: 26000 gccgccgtttcaatcctcgccgcc 25977
>dbj|AP003217.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0094H06 Length = 147245 Score = 40.1 bits (20), Expect = 7.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 88 ctcctggccgccgtctcaatcctcgccgccgc 119 ||||||||||||||| | | |||||||||||| Sbjct: 68301 ctcctggccgccgtcgccagcctcgccgccgc 68332
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 504 cgaatccgtgcgccggcgcg 523 |||||||||||||||||||| Sbjct: 256271 cgaatccgtgcgccggcgcg 256290
>emb|X87993.1|CXSTPLUC1 C.xyli DNA for strong promoter (420 bp) Length = 420 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 339 cgcgcgggccggcggcgagt 358 |||||||||||||||||||| Sbjct: 307 cgcgcgggccggcggcgagt 326
>dbj|AK000124.1| Homo sapiens cDNA FLJ20117 fis, clone COL05727 Length = 1940 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 gcaactccacctcctcctcc 306 |||||||||||||||||||| Sbjct: 183 gcaactccacctcctcctcc 164
>ref|XM_319733.2| Anopheles gambiae str. PEST ENSANGP00000019379 (ENSANGG00000016890), partial mRNA Length = 4785 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 466 gcggcggtggcgctgccgcc 485 |||||||||||||||||||| Sbjct: 3577 gcggcggtggcgctgccgcc 3558
>emb|AJ459254.1|TAE459254 Triticum aestivum TAA1c gene for fatty acyl coA reductase Length = 2522 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 110 tcgccgccgcggcatccacc 129 |||||||||||||||||||| Sbjct: 416 tcgccgccgcggcatccacc 397
>emb|AJ459253.1|TAE459253 Triticum aestivum mRNA for fatty acyl coA reductase (TAA1c gene) Length = 1949 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 110 tcgccgccgcggcatccacc 129 |||||||||||||||||||| Sbjct: 268 tcgccgccgcggcatccacc 249
>gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence Length = 3131724 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 516 ccggcgcggcgtcgacatgg 535 |||||||||||||||||||| Sbjct: 399466 ccggcgcggcgtcgacatgg 399485
>gb|BC071683.1| Homo sapiens dexamethasone-induced transcript, mRNA (cDNA clone MGC:87910 IMAGE:5190179), complete cds Length = 1430 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 48 gccggccgcccgggcgccgc 67 |||||||||||||||||||| Sbjct: 224 gccggccgcccgggcgccgc 243
>gb|AF098966.1|AF098966 Streptomyces arenae strain DSM40737 regulator (ncnR) and cyclase (ncnE) genes, complete cds Length = 2982 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 tcgcgccgagccggccgccc 58 |||||||||||||||||||| Sbjct: 1002 tcgcgccgagccggccgccc 983
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 464 tcgcggcggtggcgctgccg 483 |||||||||||||||||||| Sbjct: 821607 tcgcggcggtggcgctgccg 821588
>gb|L42177.1|MUSS1PR Mus musculus S182 protein mRNA, complete cds Length = 1964 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 45 cgagccggccgcccgggcgc 64 |||||||||||||||||||| Sbjct: 37 cgagccggccgcccgggcgc 56
>gb|AC104883.16| Mus musculus chromosome 8, clone RP24-263A8, complete sequence Length = 198707 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 17 tctccttcatccaagcctca 36 |||||||||||||||||||| Sbjct: 27614 tctccttcatccaagcctca 27595
>ref|NM_021428.3| Mus musculus dexamethasone-induced transcript (Dexi), mRNA Length = 1404 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 48 gccggccgcccgggcgccgc 67 |||||||||||||||||||| Sbjct: 278 gccggccgcccgggcgccgc 297
>gb|AF007560.1|AF007560 Mus musculus presenilin-1 gene, alternatively spliced transcripts, complete cds Length = 48974 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 45 cgagccggccgcccgggcgc 64 |||||||||||||||||||| Sbjct: 2344 cgagccggccgcccgggcgc 2363 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,182,923 Number of Sequences: 3902068 Number of extensions: 4182923 Number of successful extensions: 108088 Number of sequences better than 10.0: 121 Number of HSP's better than 10.0 without gapping: 125 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 102650 Number of HSP's gapped (non-prelim): 5432 length of query: 560 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 537 effective length of database: 17,143,297,704 effective search space: 9205950867048 effective search space used: 9205950867048 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
