ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart43f08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK119210.1| Oryza sativa (japonica cultivar-group) cDNA clon... 119 9e-24
2dbj|AK104452.1| Oryza sativa (japonica cultivar-group) cDNA clon... 119 9e-24
3dbj|AK099017.1| Oryza sativa (japonica cultivar-group) cDNA clon... 119 9e-24
4dbj|AK061527.1| Oryza sativa (japonica cultivar-group) cDNA clon... 119 9e-24
5dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 101 2e-18
6dbj|AP005110.2| Oryza sativa (japonica cultivar-group) genomic D... 101 2e-18
7ref|XM_472398.1| Oryza sativa (japonica cultivar-group), predic... 60 8e-06
8dbj|AK102032.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 8e-06
9emb|AL662947.3|OSJN00148 Oryza sativa genomic DNA, chromosome 4,... 52 0.002
10dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 52 0.002
11ref|NM_114700.2| Arabidopsis thaliana catalytic/ hydrolase AT3G4... 44 0.45
12gb|AY065282.1| Arabidopsis thaliana unknown protein (At3g48410) ... 44 0.45
13emb|AL049659.2|ATT29H11 Arabidopsis thaliana DNA chromosome 3, B... 44 0.45
14emb|BX823905.1|CNS0A6MQ Arabidopsis thaliana Full-length cDNA Co... 44 0.45
15emb|BX825580.1|CNS0A4U7 Arabidopsis thaliana Full-length cDNA Co... 44 0.45
16gb|AC132590.3| Mus musculus BAC clone RP24-273G1 from chromosome... 42 1.8
17gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, comple... 42 1.8
18dbj|AK040208.1| Mus musculus 0 day neonate thymus cDNA, RIKEN fu... 42 1.8
19gb|AC127279.3| Mus musculus BAC clone RP24-247K4 from chromosome... 42 1.8
20emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome comple... 42 1.8
21gb|AC130216.4| Mus musculus BAC clone RP23-218G9 from 10, comple... 42 1.8
22ref|XM_512509.1| PREDICTED: Pan troglodytes phosphoinositide-3-k... 40 7.0
23ref|NM_005027.2| Homo sapiens phosphoinositide-3-kinase, regulat... 40 7.0
24gb|AC096684.3| Takifugu rubripes clone 241N7, complete sequence 40 7.0
25gb|AC132084.2| Mus musculus BAC clone RP24-544J20 from chromosom... 40 7.0
26gb|AC147008.21| Medicago truncatula clone mth2-106d6, complete s... 40 7.0
27gb|BC063240.1| Homo sapiens cDNA clone IMAGE:4837855, **** WARNI... 40 7.0
28gb|BC053375.1| Homo sapiens cDNA clone IMAGE:6502617, **** WARNI... 40 7.0
29gb|BC032647.1| Homo sapiens phosphoinositide-3-kinase, regulator... 40 7.0
30emb|AL391280.15| Human DNA sequence from clone RP13-128O4 on chr... 40 7.0
31gb|AF503504.2| Photorhabdus luminescens MtaD-like protein gene, ... 40 7.0
32emb|X80907.1|HSPHOSINK H.sapiens mRNA for p85 beta subunit of ph... 40 7.0
33emb|BX572594.1| Rhodopseudomonas palustris CGA009 complete genom... 40 7.0
34gb|BC070082.1| Homo sapiens phosphoinositide-3-kinase, regulator... 40 7.0
35dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.0
36gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome 40 7.0
37gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 7.0
38dbj|AP003543.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.0
39dbj|AP003507.2| Oryza sativa (japonica cultivar-group) genomic D... 40 7.0
40dbj|AK069141.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.0
41gb|BC090249.1| Homo sapiens phosphoinositide-3-kinase, regulator... 40 7.0
42gb|AC007192.1|AC007192 Homo sapiens chromosome 19, cosmid R27516... 40 7.0
43gb|AC145913.3| Gallus gallus BAC clone CH261-50N9 from chromosom... 40 7.0 
>dbj|AK119210.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-041-E04, full
           insert sequence
          Length = 1405

 Score =  119 bits (60), Expect = 9e-24
 Identities = 219/272 (80%)
 Strand = Plus / Plus

                                                                       
Query: 231 ctgtaccgtcagcttcaggctccgcctccaaaaacctgcggatccccaggcggccctccg 290
           |||||||| ||||||||| |||||  ||| |||| ||| ||| | || || |||||||||
Sbjct: 259 ctgtaccggcagcttcagcctccggttccgaaaatctgtggaactccgggaggccctccg 318

                                                                       
Query: 291 gtcaccgcgccgaggatcaggctcagtgacggcaggcacttggcttaccatgagtctggt 350
           || |||| ||| ||  |   |||||  || || |||||| |||| ||||| ||||  || 
Sbjct: 319 gtgaccgggccaagattgcagctcaaggatgggaggcacctggcctaccacgagtacggc 378

                                                                       
Query: 351 gtccccagggaacaggccaagcataagatcgtcttcgtccatggattcgactcatgcaga 410
           ||||| | ||| ||||||||||| |||||| ||||||||||||| |||||||| ||||||
Sbjct: 379 gtccctaaggatcaggccaagcacaagatcatcttcgtccatggcttcgactcctgcaga 438

                                                                       
Query: 411 tacgacgccctccgagtatcacccgagctggcgcaggagctcgggatctacattgtgtcc 470
           ||||||||||||| ||| ||||| ||||| ||  | ||||| ||  ||||||| || || 
Sbjct: 439 tacgacgccctccaagtgtcacctgagctcgcagaagagctgggtgtctacatggtctcg 498

                                           
Query: 471 ttcgatcgacctggatatggcgagagtgaccc 502
           |||||||| ||||| ||||| ||||| |||||
Sbjct: 499 ttcgatcgtcctgggtatggagagagcgaccc 530
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>dbj|AK104452.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-H03, full
           insert sequence
          Length = 1399

 Score =  119 bits (60), Expect = 9e-24
 Identities = 219/272 (80%)
 Strand = Plus / Plus

                                                                       
Query: 231 ctgtaccgtcagcttcaggctccgcctccaaaaacctgcggatccccaggcggccctccg 290
           |||||||| ||||||||| |||||  ||| |||| ||| ||| | || || |||||||||
Sbjct: 259 ctgtaccggcagcttcagcctccggttccgaaaatctgtggaactccgggaggccctccg 318

                                                                       
Query: 291 gtcaccgcgccgaggatcaggctcagtgacggcaggcacttggcttaccatgagtctggt 350
           || |||| ||| ||  |   |||||  || || |||||| |||| ||||| ||||  || 
Sbjct: 319 gtgaccgggccaagattgcagctcaaggatgggaggcacctggcctaccacgagtacggc 378

                                                                       
Query: 351 gtccccagggaacaggccaagcataagatcgtcttcgtccatggattcgactcatgcaga 410
           ||||| | ||| ||||||||||| |||||| ||||||||||||| |||||||| ||||||
Sbjct: 379 gtccctaaggatcaggccaagcacaagatcatcttcgtccatggcttcgactcctgcaga 438

                                                                       
Query: 411 tacgacgccctccgagtatcacccgagctggcgcaggagctcgggatctacattgtgtcc 470
           ||||||||||||| ||| ||||| ||||| ||  | ||||| ||  ||||||| || || 
Sbjct: 439 tacgacgccctccaagtgtcacctgagctcgcagaagagctgggtgtctacatggtctcg 498

                                           
Query: 471 ttcgatcgacctggatatggcgagagtgaccc 502
           |||||||| ||||| ||||| ||||| |||||
Sbjct: 499 ttcgatcgtcctgggtatggagagagcgaccc 530
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>dbj|AK099017.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013119A16, full
           insert sequence
          Length = 1391

 Score =  119 bits (60), Expect = 9e-24
 Identities = 219/272 (80%)
 Strand = Plus / Plus

                                                                       
Query: 231 ctgtaccgtcagcttcaggctccgcctccaaaaacctgcggatccccaggcggccctccg 290
           |||||||| ||||||||| |||||  ||| |||| ||| ||| | || || |||||||||
Sbjct: 260 ctgtaccggcagcttcagcctccggttccgaaaatctgtggaactccgggaggccctccg 319

                                                                       
Query: 291 gtcaccgcgccgaggatcaggctcagtgacggcaggcacttggcttaccatgagtctggt 350
           || |||| ||| ||  |   |||||  || || |||||| |||| ||||| ||||  || 
Sbjct: 320 gtgaccgggccaagattgcagctcaaggatgggaggcacctggcctaccacgagtacggc 379

                                                                       
Query: 351 gtccccagggaacaggccaagcataagatcgtcttcgtccatggattcgactcatgcaga 410
           ||||| | ||| ||||||||||| |||||| ||||||||||||| |||||||| ||||||
Sbjct: 380 gtccctaaggatcaggccaagcacaagatcatcttcgtccatggcttcgactcctgcaga 439

                                                                       
Query: 411 tacgacgccctccgagtatcacccgagctggcgcaggagctcgggatctacattgtgtcc 470
           ||||||||||||| ||| ||||| ||||| ||  | ||||| ||  ||||||| || || 
Sbjct: 440 tacgacgccctccaagtgtcacctgagctcgcagaagagctgggtgtctacatggtctcg 499

                                           
Query: 471 ttcgatcgacctggatatggcgagagtgaccc 502
           |||||||| ||||| ||||| ||||| |||||
Sbjct: 500 ttcgatcgtcctgggtatggagagagcgaccc 531
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>dbj|AK061527.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-D10, full
           insert sequence
          Length = 1409

 Score =  119 bits (60), Expect = 9e-24
 Identities = 219/272 (80%)
 Strand = Plus / Plus

                                                                       
Query: 231 ctgtaccgtcagcttcaggctccgcctccaaaaacctgcggatccccaggcggccctccg 290
           |||||||| ||||||||| |||||  ||| |||| ||| ||| | || || |||||||||
Sbjct: 259 ctgtaccggcagcttcagcctccggttccgaaaatctgtggaactccgggaggccctccg 318

                                                                       
Query: 291 gtcaccgcgccgaggatcaggctcagtgacggcaggcacttggcttaccatgagtctggt 350
           || |||| ||| ||  |   |||||  || || |||||| |||| ||||| ||||  || 
Sbjct: 319 gtgaccgggccaagattgcagctcaaggatgggaggcacctggcctaccacgagtacggc 378

                                                                       
Query: 351 gtccccagggaacaggccaagcataagatcgtcttcgtccatggattcgactcatgcaga 410
           ||||| | ||| ||||||||||| |||||| ||||||||||||| |||||||| ||||||
Sbjct: 379 gtccctaaggatcaggccaagcacaagatcatcttcgtccatggcttcgactcctgcaga 438

                                                                       
Query: 411 tacgacgccctccgagtatcacccgagctggcgcaggagctcgggatctacattgtgtcc 470
           ||||||||||||| ||| ||||| ||||| ||  | ||||| ||  ||||||| || || 
Sbjct: 439 tacgacgccctccaagtgtcacctgagctcgcagaagagctgggtgtctacatggtctcg 498

                                           
Query: 471 ttcgatcgacctggatatggcgagagtgaccc 502
           |||||||| ||||| ||||| ||||| |||||
Sbjct: 499 ttcgatcgtcctgggtatggagagagcgaccc 530
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  101 bits (51), Expect = 2e-18
 Identities = 165/203 (81%)
 Strand = Plus / Plus

                                                                            
Query: 231      ctgtaccgtcagcttcaggctccgcctccaaaaacctgcggatccccaggcggccctccg 290
                |||||||| ||||||||| |||||  ||| |||| ||| ||| | || || |||||||||
Sbjct: 19613449 ctgtaccggcagcttcagcctccggttccgaaaatctgtggaactccgggaggccctccg 19613508

                                                                            
Query: 291      gtcaccgcgccgaggatcaggctcagtgacggcaggcacttggcttaccatgagtctggt 350
                || |||| ||| ||  |   |||||  || || |||||| |||| ||||| ||||  || 
Sbjct: 19613509 gtgaccgggccaagattgcagctcaaggatgggaggcacctggcctaccacgagtacggc 19613568

                                                                            
Query: 351      gtccccagggaacaggccaagcataagatcgtcttcgtccatggattcgactcatgcaga 410
                ||||| | ||| ||||||||||| |||||| ||||||||||||| |||||||| ||||||
Sbjct: 19613569 gtccctaaggatcaggccaagcacaagatcatcttcgtccatggcttcgactcctgcaga 19613628

                                       
Query: 411      tacgacgccctccgagtatcacc 433
                ||||||||||||| ||| |||||
Sbjct: 19613629 tacgacgccctccaagtgtcacc 19613651
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>dbj|AP005110.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0605D08
          Length = 144340

 Score =  101 bits (51), Expect = 2e-18
 Identities = 165/203 (81%)
 Strand = Plus / Plus

                                                                         
Query: 231   ctgtaccgtcagcttcaggctccgcctccaaaaacctgcggatccccaggcggccctccg 290
             |||||||| ||||||||| |||||  ||| |||| ||| ||| | || || |||||||||
Sbjct: 79735 ctgtaccggcagcttcagcctccggttccgaaaatctgtggaactccgggaggccctccg 79794

                                                                         
Query: 291   gtcaccgcgccgaggatcaggctcagtgacggcaggcacttggcttaccatgagtctggt 350
             || |||| ||| ||  |   |||||  || || |||||| |||| ||||| ||||  || 
Sbjct: 79795 gtgaccgggccaagattgcagctcaaggatgggaggcacctggcctaccacgagtacggc 79854

                                                                         
Query: 351   gtccccagggaacaggccaagcataagatcgtcttcgtccatggattcgactcatgcaga 410
             ||||| | ||| ||||||||||| |||||| ||||||||||||| |||||||| ||||||
Sbjct: 79855 gtccctaaggatcaggccaagcacaagatcatcttcgtccatggcttcgactcctgcaga 79914

                                    
Query: 411   tacgacgccctccgagtatcacc 433
             ||||||||||||| ||| |||||
Sbjct: 79915 tacgacgccctccaagtgtcacc 79937
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>ref|XM_472398.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1035

 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 108/134 (80%)
 Strand = Plus / Plus

                                                                       
Query: 318 gacggcaggcacttggcttaccatgagtctggtgtccccagggaacaggccaagcataag 377
           ||||| ||||| ||||| ||||  ||||| || ||||| | ||| ||||||||| | |||
Sbjct: 136 gacggtaggcatttggcctacctggagtccggcgtcccaaaggaccaggccaagtacaag 195

                                                                       
Query: 378 atcgtcttcgtccatggattcgactcatgcagatacgacgccctccgagtatcacccgag 437
           ||| |||| || ||||| || ||||| ||||||||||| || |||| | | || || |||
Sbjct: 196 atcatctttgttcatggttttgactcgtgcagatacgatgctctcccaatttccccggag 255

                         
Query: 438 ctggcgcaggagct 451
           |||||||| |||||
Sbjct: 256 ctggcgcaagagct 269
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>dbj|AK102032.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033081A11, full
           insert sequence
          Length = 1293

 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 108/134 (80%)
 Strand = Plus / Plus

                                                                       
Query: 318 gacggcaggcacttggcttaccatgagtctggtgtccccagggaacaggccaagcataag 377
           ||||| ||||| ||||| ||||  ||||| || ||||| | ||| ||||||||| | |||
Sbjct: 177 gacggtaggcatttggcctacctggagtccggcgtcccaaaggaccaggccaagtacaag 236

                                                                       
Query: 378 atcgtcttcgtccatggattcgactcatgcagatacgacgccctccgagtatcacccgag 437
           ||| |||| || ||||| || ||||| ||||||||||| || |||| | | || || |||
Sbjct: 237 atcatctttgttcatggttttgactcgtgcagatacgatgctctcccaatttccccggag 296

                         
Query: 438 ctggcgcaggagct 451
           |||||||| |||||
Sbjct: 297 ctggcgcaagagct 310
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>emb|AL662947.3|OSJN00148 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0073L04,
             complete sequence
          Length = 143301

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 80/98 (81%)
 Strand = Plus / Plus

                                                                         
Query: 318   gacggcaggcacttggcttaccatgagtctggtgtccccagggaacaggccaagcataag 377
             ||||| ||||| ||||| ||||  ||||| || ||||| | ||| ||||||||| | |||
Sbjct: 83099 gacggtaggcatttggcctacctggagtccggcgtcccaaaggaccaggccaagtacaag 83158

                                                   
Query: 378   atcgtcttcgtccatggattcgactcatgcagatacga 415
             ||| |||| || ||||| || ||||| |||||||||||
Sbjct: 83159 atcatctttgttcatggttttgactcgtgcagatacga 83196



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                  
Query: 363   caggccaagcataagatcgtcttcgtccatggattcgactcatgcagatacga 415
             ||||||||| | |||||| |||| || ||||| |||||||| |||||||||||
Sbjct: 91484 caggccaagtacaagatcatctttgttcatggtttcgactcgtgcagatacga 91536
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 80/98 (81%)
 Strand = Plus / Plus

                                                                            
Query: 318      gacggcaggcacttggcttaccatgagtctggtgtccccagggaacaggccaagcataag 377
                ||||| ||||| ||||| ||||  ||||| || ||||| | ||| ||||||||| | |||
Sbjct: 20352466 gacggtaggcatttggcctacctggagtccggcgtcccaaaggaccaggccaagtacaag 20352525

                                                      
Query: 378      atcgtcttcgtccatggattcgactcatgcagatacga 415
                ||| |||| || ||||| || ||||| |||||||||||
Sbjct: 20352526 atcatctttgttcatggttttgactcgtgcagatacga 20352563



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                     
Query: 363      caggccaagcataagatcgtcttcgtccatggattcgactcatgcagatacga 415
                ||||||||| | |||||| |||| || ||||| |||||||| |||||||||||
Sbjct: 20360851 caggccaagtacaagatcatctttgttcatggtttcgactcgtgcagatacga 20360903
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>ref|NM_114700.2| Arabidopsis thaliana catalytic/ hydrolase AT3G48410 mRNA, complete
           cds
          Length = 1330

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 40/46 (86%)
 Strand = Plus / Plus

                                                         
Query: 454 ggatctacattgtgtccttcgatcgacctggatatggcgagagtga 499
           |||| ||||||||||| || ||||| ||||| ||||| ||||||||
Sbjct: 462 ggatatacattgtgtcttttgatcgtcctggttatggagagagtga 507
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>gb|AY065282.1| Arabidopsis thaliana unknown protein (At3g48410) mRNA, complete cds
          Length = 1346

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 40/46 (86%)
 Strand = Plus / Plus

                                                         
Query: 454 ggatctacattgtgtccttcgatcgacctggatatggcgagagtga 499
           |||| ||||||||||| || ||||| ||||| ||||| ||||||||
Sbjct: 462 ggatatacattgtgtcttttgatcgtcctggttatggagagagtga 507
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>emb|AL049659.2|ATT29H11 Arabidopsis thaliana DNA chromosome 3, BAC clone T29H11
          Length = 97488

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                           
Query: 454   ggatctacattgtgtccttcgatcgacctggatatggcgagagtga 499
             |||| ||||||||||| || ||||| ||||| ||||| ||||||||
Sbjct: 59448 ggatatacattgtgtcttttgatcgtcctggttatggagagagtga 59403
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>emb|BX823905.1|CNS0A6MQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS90ZF02 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1290

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 40/46 (86%)
 Strand = Plus / Plus

                                                         
Query: 454 ggatctacattgtgtccttcgatcgacctggatatggcgagagtga 499
           |||| ||||||||||| || ||||| ||||| ||||| ||||||||
Sbjct: 449 ggatatacattgtgtcttttgatcgtcctggttatggagagagtga 494
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>emb|BX825580.1|CNS0A4U7 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL45ZH12 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 902

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 40/46 (86%)
 Strand = Plus / Plus

                                                         
Query: 454 ggatctacattgtgtccttcgatcgacctggatatggcgagagtga 499
           |||| ||||||||||| || ||||| ||||| ||||| ||||||||
Sbjct: 66  ggatatacattgtgtcttttgatcgtcctggttatggagagagtga 111
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>gb|AC132590.3| Mus musculus BAC clone RP24-273G1 from chromosome 14, complete sequence
          Length = 161371

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 343   agtctggtgtccccagggaac 363
             |||||||||||||||||||||
Sbjct: 36539 agtctggtgtccccagggaac 36559
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>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome
          Length = 3561584

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 434     cgagctggcgcaggagctcgggatc 458
               |||||||||||||| ||||||||||
Sbjct: 2940743 cgagctggcgcaggcgctcgggatc 2940719
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>dbj|AK040208.1| Mus musculus 0 day neonate thymus cDNA, RIKEN full-length enriched
           library, clone:A430077G12 product:unclassifiable, full
           insert sequence
          Length = 1346

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 435 gagctggcgcaggagctcggg 455
           |||||||||||||||||||||
Sbjct: 450 gagctggcgcaggagctcggg 470
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>gb|AC127279.3| Mus musculus BAC clone RP24-247K4 from chromosome 10, complete
            sequence
          Length = 185573

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 435  gagctggcgcaggagctcggg 455
            |||||||||||||||||||||
Sbjct: 7088 gagctggcgcaggagctcggg 7108
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>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence
          Length = 3716413

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 28      gcgccgagccgtcgtcgttct 48
               |||||||||||||||||||||
Sbjct: 1202828 gcgccgagccgtcgtcgttct 1202808
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>gb|AC130216.4| Mus musculus BAC clone RP23-218G9 from 10, complete sequence
          Length = 182204

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 435   gagctggcgcaggagctcggg 455
             |||||||||||||||||||||
Sbjct: 55367 gagctggcgcaggagctcggg 55347
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>ref|XM_512509.1| PREDICTED: Pan troglodytes phosphoinositide-3-kinase, regulatory
           subunit 2 (p85 beta) (LOC455855), mRNA
          Length = 2753

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 156 cctccggccgctcccggcgg 175
           ||||||||||||||||||||
Sbjct: 576 cctccggccgctcccggcgg 557
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>ref|NM_005027.2| Homo sapiens phosphoinositide-3-kinase, regulatory subunit 2 (p85
           beta) (PIK3R2), mRNA
          Length = 3953

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 156 cctccggccgctcccggcgg 175
           ||||||||||||||||||||
Sbjct: 576 cctccggccgctcccggcgg 557
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>gb|AC096684.3| Takifugu rubripes clone 241N7, complete sequence
          Length = 84793

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 245   tcaggctccgcctccaaaaa 264
             ||||||||||||||||||||
Sbjct: 13076 tcaggctccgcctccaaaaa 13057
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>gb|AC132084.2| Mus musculus BAC clone RP24-544J20 from chromosome 5, complete sequence
          Length = 119933

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 345   tctggtgtccccagggaaca 364
             ||||||||||||||||||||
Sbjct: 87872 tctggtgtccccagggaaca 87891
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>gb|AC147008.21| Medicago truncatula clone mth2-106d6, complete sequence
          Length = 144439

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 373    ataagatcgtcttcgtccat 392
              ||||||||||||||||||||
Sbjct: 136269 ataagatcgtcttcgtccat 136288
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>gb|BC063240.1| Homo sapiens cDNA clone IMAGE:4837855, **** WARNING: chimeric clone
           ****
          Length = 5160

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 156 cctccggccgctcccggcgg 175
           ||||||||||||||||||||
Sbjct: 626 cctccggccgctcccggcgg 607
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>gb|BC053375.1| Homo sapiens cDNA clone IMAGE:6502617, **** WARNING: chimeric clone
           ****
          Length = 1209

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 156 cctccggccgctcccggcgg 175
           ||||||||||||||||||||
Sbjct: 83  cctccggccgctcccggcgg 64
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>gb|BC032647.1| Homo sapiens phosphoinositide-3-kinase, regulatory subunit 2 (p85
           beta), mRNA (cDNA clone IMAGE:5518348), containing
           frame-shift errors
          Length = 3282

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 156 cctccggccgctcccggcgg 175
           ||||||||||||||||||||
Sbjct: 332 cctccggccgctcccggcgg 313
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>emb|AL391280.15| Human DNA sequence from clone RP13-128O4 on chromosome X Contains the
             3' end of the gene for a novel protein similar to zizimin1
             (FLJ32122), the IL13RA1 gene for interleukin 13 receptor,
             alpha 1 (NR4, IL-13RA, IL-13Ra), a novel pseudogene and a
             CpG island, complete sequence
          Length = 153026

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 147   gccccgccgcctccggccgctcccggcggctc 178
             |||||||| ||||||||||||| || ||||||
Sbjct: 81882 gccccgcctcctccggccgctctcgccggctc 81913
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>gb|AF503504.2| Photorhabdus luminescens MtaD-like protein gene, partial cds; putative
             inner membrane protein, putative efflux protein, MhpE-like
             protein, hypothetical protein, DlpA-like protein,
             CinA-like protein, DlpA-like protein; complete cds; mcf
             pathogenicity island, complete sequence; tRNA-Phe gene,
             complete sequence; and TetR-family-like regulatory protein
             (tetR) gene, partial cds
          Length = 35876

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 230   tctgtaccgtcagcttcagg 249
             ||||||||||||||||||||
Sbjct: 23613 tctgtaccgtcagcttcagg 23594
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>emb|X80907.1|HSPHOSINK H.sapiens mRNA for p85 beta subunit of
           phosphatidyl-inositol-3-kinase
          Length = 3201

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 156 cctccggccgctcccggcgg 175
           ||||||||||||||||||||
Sbjct: 305 cctccggccgctcccggcgg 286
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>emb|BX572594.1| Rhodopseudomonas palustris CGA009 complete genome; segment 2/16
          Length = 348971

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 151    cgccgcctccggccgctccc 170
              ||||||||||||||||||||
Sbjct: 314412 cgccgcctccggccgctccc 314393
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>gb|BC070082.1| Homo sapiens phosphoinositide-3-kinase, regulatory subunit 2 (p85
           beta), mRNA (cDNA clone MGC:87406 IMAGE:30343107),
           complete cds
          Length = 3953

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 156 cctccggccgctcccggcgg 175
           ||||||||||||||||||||
Sbjct: 576 cctccggccgctcccggcgg 557
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 147      gccccgccgcctccggccgctccc 170
                |||||||||||||| |||||||||
Sbjct: 12188789 gccccgccgcctcccgccgctccc 12188812
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>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome
          Length = 3052398

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 435    gagctggcgcaggagctcgg 454
              ||||||||||||||||||||
Sbjct: 473896 gagctggcgcaggagctcgg 473877
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 151     cgccgcctccggccgctccc 170
               ||||||||||||||||||||
Sbjct: 4346539 cgccgcctccggccgctccc 4346520
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>dbj|AP003543.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0592B08
          Length = 131096

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 147   gccccgccgcctccggccgctccc 170
             |||||||||||||| |||||||||
Sbjct: 25811 gccccgccgcctcccgccgctccc 25834
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>dbj|AP003507.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0468A12
          Length = 143018

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 147    gccccgccgcctccggccgctccc 170
              |||||||||||||| |||||||||
Sbjct: 131578 gccccgccgcctcccgccgctccc 131601
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>dbj|AK069141.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023008K20, full
           insert sequence
          Length = 1951

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 147 gccccgccgcctccggccgctccc 170
           |||||||||||||| |||||||||
Sbjct: 41  gccccgccgcctcccgccgctccc 64
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>gb|BC090249.1| Homo sapiens phosphoinositide-3-kinase, regulatory subunit 2 (p85
           beta), mRNA (cDNA clone MGC:99658 IMAGE:6341766),
           complete cds
          Length = 3915

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 156 cctccggccgctcccggcgg 175
           ||||||||||||||||||||
Sbjct: 536 cctccggccgctcccggcgg 517
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>gb|AC007192.1|AC007192 Homo sapiens chromosome 19, cosmid R27516, complete sequence
          Length = 38911

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 156   cctccggccgctcccggcgg 175
             ||||||||||||||||||||
Sbjct: 19668 cctccggccgctcccggcgg 19649
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>gb|AC145913.3| Gallus gallus BAC clone CH261-50N9 from chromosome unknown, complete
             sequence
          Length = 182816

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 147   gccccgccgcctccggccgctccc 170
             ||||||||||| ||||||||||||
Sbjct: 77940 gccccgccgccaccggccgctccc 77963


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,175,300
Number of Sequences: 3902068
Number of extensions: 3175300
Number of successful extensions: 55837
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 55270
Number of HSP's gapped (non-prelim): 567
length of query: 517
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 494
effective length of database: 17,143,297,704
effective search space: 8468789065776
effective search space used: 8468789065776
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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