ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart43f03 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY461803.1| Oryza sativa (japonica cultivar-group) Dof28 mRNA, complete cds Length = 879 Score = 161 bits (81), Expect = 3e-36 Identities = 120/133 (90%) Strand = Plus / Plus Query: 356 agcagcagaagctggagtgcccgcggtgcagctccagcgacaccaagttctgctactaca 415 |||||||| |||||||||||||||| ||| | |||| | ||||||||||||||||||||| Sbjct: 161 agcagcagcagctggagtgcccgcgctgccgatccaccaacaccaagttctgctactaca 220 Query: 416 acaactacagcatggcacagccgcgccactactgccgcacatgccgccgctactggacgc 475 |||||||||||| | | ||||||||||||| ||||||| | ||||||||||||||||||| Sbjct: 221 acaactacagcacgtcgcagccgcgccacttctgccgcgcctgccgccgctactggacgc 280 Query: 476 acggtggcacgct 488 |||| |||||||| Sbjct: 281 acgggggcacgct 293
>ref|XM_474359.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 621 Score = 161 bits (81), Expect = 3e-36 Identities = 120/133 (90%) Strand = Plus / Plus Query: 356 agcagcagaagctggagtgcccgcggtgcagctccagcgacaccaagttctgctactaca 415 |||||||| |||||||||||||||| ||| | |||| | ||||||||||||||||||||| Sbjct: 134 agcagcagcagctggagtgcccgcgctgccgatccaccaacaccaagttctgctactaca 193 Query: 416 acaactacagcatggcacagccgcgccactactgccgcacatgccgccgctactggacgc 475 |||||||||||| | | ||||||||||||| ||||||| | ||||||||||||||||||| Sbjct: 194 acaactacagcacgtcgcagccgcgccacttctgccgcgcctgccgccgctactggacgc 253 Query: 476 acggtggcacgct 488 |||| |||||||| Sbjct: 254 acgggggcacgct 266
>emb|AL606668.2|OSJN00083 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0064G10, complete sequence Length = 150206 Score = 161 bits (81), Expect = 3e-36 Identities = 120/133 (90%) Strand = Plus / Minus Query: 356 agcagcagaagctggagtgcccgcggtgcagctccagcgacaccaagttctgctactaca 415 |||||||| |||||||||||||||| ||| | |||| | ||||||||||||||||||||| Sbjct: 145395 agcagcagcagctggagtgcccgcgctgccgatccaccaacaccaagttctgctactaca 145336 Query: 416 acaactacagcatggcacagccgcgccactactgccgcacatgccgccgctactggacgc 475 |||||||||||| | | ||||||||||||| ||||||| | ||||||||||||||||||| Sbjct: 145335 acaactacagcacgtcgcagccgcgccacttctgccgcgcctgccgccgctactggacgc 145276 Query: 476 acggtggcacgct 488 |||| |||||||| Sbjct: 145275 acgggggcacgct 145263
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 161 bits (81), Expect = 3e-36 Identities = 120/133 (90%) Strand = Plus / Minus Query: 356 agcagcagaagctggagtgcccgcggtgcagctccagcgacaccaagttctgctactaca 415 |||||||| |||||||||||||||| ||| | |||| | ||||||||||||||||||||| Sbjct: 34691274 agcagcagcagctggagtgcccgcgctgccgatccaccaacaccaagttctgctactaca 34691215 Query: 416 acaactacagcatggcacagccgcgccactactgccgcacatgccgccgctactggacgc 475 |||||||||||| | | ||||||||||||| ||||||| | ||||||||||||||||||| Sbjct: 34691214 acaactacagcacgtcgcagccgcgccacttctgccgcgcctgccgccgctactggacgc 34691155 Query: 476 acggtggcacgct 488 |||| |||||||| Sbjct: 34691154 acgggggcacgct 34691142 Score = 85.7 bits (43), Expect = 1e-13 Identities = 115/139 (82%) Strand = Plus / Minus Query: 373 tgcccgcggtgcagctccagcgacaccaagttctgctactacaacaactacagcatggca 432 ||||||||||||| ||| | |||||||||||||||||||||||||||||||| | Sbjct: 28509422 tgcccgcggtgcaactcgacgaacaccaagttctgctactacaacaactacagcctccag 28509363 Query: 433 cagccgcgccactactgccgcacatgccgccgctactggacgcacggtggcacgctgcgc 492 ||||||||| ||| |||| || ||||| |||||||||||| | || ||| |||| ||| Sbjct: 28509362 cagccgcgctacttctgcaagacgtgccggcgctactggacggagggcggctcgctccgc 28509303 Query: 493 aaggtccccgtcggtggcg 511 || ||||||||||| |||| Sbjct: 28509302 aacgtccccgtcggcggcg 28509284 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 238 ctcctccccgccgccgccgcc 258 ||||||||||||||||||||| Sbjct: 26332372 ctcctccccgccgccgccgcc 26332392 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 ctcctccccgccgccgccgcc 258 ||||||||||||||||||||| Sbjct: 20444703 ctcctccccgccgccgccgcc 20444683 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 238 ctcctccccgccgccgccgcc 258 ||||||||||||||||||||| Sbjct: 20232203 ctcctccccgccgccgccgcc 20232223 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 239 tcctccccgccgccgccgcc 258 |||||||||||||||||||| Sbjct: 31131177 tcctccccgccgccgccgcc 31131196 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 244 cccgccgccgccgccaagcg 263 |||||||||||||||||||| Sbjct: 1861887 cccgccgccgccgccaagcg 1861868
>dbj|AK107524.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-129-F12, full insert sequence Length = 1096 Score = 161 bits (81), Expect = 3e-36 Identities = 120/133 (90%) Strand = Plus / Plus Query: 356 agcagcagaagctggagtgcccgcggtgcagctccagcgacaccaagttctgctactaca 415 |||||||| |||||||||||||||| ||| | |||| | ||||||||||||||||||||| Sbjct: 271 agcagcagcagctggagtgcccgcgctgccgatccaccaacaccaagttctgctactaca 330 Query: 416 acaactacagcatggcacagccgcgccactactgccgcacatgccgccgctactggacgc 475 |||||||||||| | | ||||||||||||| ||||||| | ||||||||||||||||||| Sbjct: 331 acaactacagcacgtcgcagccgcgccacttctgccgcgcctgccgccgctactggacgc 390 Query: 476 acggtggcacgct 488 |||| |||||||| Sbjct: 391 acgggggcacgct 403
>emb|AL732349.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0402C08, complete sequence Length = 100836 Score = 161 bits (81), Expect = 3e-36 Identities = 120/133 (90%) Strand = Plus / Minus Query: 356 agcagcagaagctggagtgcccgcggtgcagctccagcgacaccaagttctgctactaca 415 |||||||| |||||||||||||||| ||| | |||| | ||||||||||||||||||||| Sbjct: 89502 agcagcagcagctggagtgcccgcgctgccgatccaccaacaccaagttctgctactaca 89443 Query: 416 acaactacagcatggcacagccgcgccactactgccgcacatgccgccgctactggacgc 475 |||||||||||| | | ||||||||||||| ||||||| | ||||||||||||||||||| Sbjct: 89442 acaactacagcacgtcgcagccgcgccacttctgccgcgcctgccgccgctactggacgc 89383 Query: 476 acggtggcacgct 488 |||| |||||||| Sbjct: 89382 acgggggcacgct 89370
>emb|AL732353.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0801D08, complete sequence Length = 103264 Score = 161 bits (81), Expect = 3e-36 Identities = 120/133 (90%) Strand = Plus / Minus Query: 356 agcagcagaagctggagtgcccgcggtgcagctccagcgacaccaagttctgctactaca 415 |||||||| |||||||||||||||| ||| | |||| | ||||||||||||||||||||| Sbjct: 34598 agcagcagcagctggagtgcccgcgctgccgatccaccaacaccaagttctgctactaca 34539 Query: 416 acaactacagcatggcacagccgcgccactactgccgcacatgccgccgctactggacgc 475 |||||||||||| | | ||||||||||||| ||||||| | ||||||||||||||||||| Sbjct: 34538 acaactacagcacgtcgcagccgcgccacttctgccgcgcctgccgccgctactggacgc 34479 Query: 476 acggtggcacgct 488 |||| |||||||| Sbjct: 34478 acgggggcacgct 34466
>ref|XM_464857.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1537 Score = 125 bits (63), Expect = 2e-25 Identities = 120/139 (86%) Strand = Plus / Plus Query: 373 tgcccgcggtgcagctccagcgacaccaagttctgctactacaacaactacagcatggca 432 ||||| ||||||| ||||| | | ||||||||||||||||||||||||||||||||||| Sbjct: 235 tgcccccggtgcaactccatcaagaccaagttctgctactacaacaactacagcatggcg 294 Query: 433 cagccgcgccactactgccgcacatgccgccgctactggacgcacggtggcacgctgcgc 492 ||||||||| ||| ||||||| ||||||||||||||||| || || ||| | || ||| Sbjct: 295 cagccgcgctacttctgccgcgagtgccgccgctactggacccagggcggctccctccgc 354 Query: 493 aaggtccccgtcggtggcg 511 || ||||||||||| |||| Sbjct: 355 aacgtccccgtcggcggcg 373
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 125 bits (63), Expect = 2e-25 Identities = 120/139 (86%) Strand = Plus / Minus Query: 373 tgcccgcggtgcagctccagcgacaccaagttctgctactacaacaactacagcatggca 432 ||||| ||||||| ||||| | | ||||||||||||||||||||||||||||||||||| Sbjct: 8590719 tgcccccggtgcaactccatcaagaccaagttctgctactacaacaactacagcatggcg 8590660 Query: 433 cagccgcgccactactgccgcacatgccgccgctactggacgcacggtggcacgctgcgc 492 ||||||||| ||| ||||||| ||||||||||||||||| || || ||| | || ||| Sbjct: 8590659 cagccgcgctacttctgccgcgagtgccgccgctactggacccagggcggctccctccgc 8590600 Query: 493 aaggtccccgtcggtggcg 511 || ||||||||||| |||| Sbjct: 8590599 aacgtccccgtcggcggcg 8590581 Score = 93.7 bits (47), Expect = 6e-16 Identities = 116/139 (83%) Strand = Plus / Minus Query: 373 tgcccgcggtgcagctccagcgacaccaagttctgctactacaacaactacagcatggca 432 ||||||||||||| ||| | |||||||||||||||||||||||||||||||| | Sbjct: 27455616 tgcccgcggtgcaactcgacgaacaccaagttctgctactacaacaactacagcctccag 27455557 Query: 433 cagccgcgccactactgccgcacatgccgccgctactggacgcacggtggcacgctgcgc 492 ||||||||| ||| |||| || |||||||||||||||||| | || ||| |||| ||| Sbjct: 27455556 cagccgcgctacttctgcaagacgtgccgccgctactggacggagggcggctcgctccgc 27455497 Query: 493 aaggtccccgtcggtggcg 511 || ||||||||||| |||| Sbjct: 27455496 aacgtccccgtcggcggcg 27455478 Score = 73.8 bits (37), Expect = 5e-10 Identities = 97/117 (82%) Strand = Plus / Minus Query: 395 acaccaagttctgctactacaacaactacagcatggcacagccgcgccactactgccgca 454 |||||||||||||||||||||| ||||||||| | | ||||||||| ||| |||| | Sbjct: 29257605 acaccaagttctgctactacaataactacagcctctcgcagccgcgctacttctgcaaga 29257546 Query: 455 catgccgccgctactggacgcacggtggcacgctgcgcaaggtccccgtcggtggcg 511 | ||||||||||||||||| | || ||| |||| || || ||||||||||| |||| Sbjct: 29257545 cgtgccgccgctactggaccaagggcggctcgctccggaacgtccccgtcggcggcg 29257489 Score = 63.9 bits (32), Expect = 5e-07 Identities = 68/80 (85%) Strand = Plus / Minus Query: 371 agtgcccgcggtgcagctccagcgacaccaagttctgctactacaacaactacagcatgg 430 |||||||||||||| || | | |||||||||||||||||||||||||||||| | | Sbjct: 30226459 agtgcccgcggtgcgagtcgaccaacaccaagttctgctactacaacaactacaacctct 30226400 Query: 431 cacagccgcgccactactgc 450 | ||||||||||||| |||| Sbjct: 30226399 cgcagccgcgccacttctgc 30226380 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 238 ctcctccccgccgccgccgcc 258 ||||||||||||||||||||| Sbjct: 34261326 ctcctccccgccgccgccgcc 34261346 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 238 ctcctccccgccgccgccgcc 258 ||||||||||||||||||||| Sbjct: 778240 ctcctccccgccgccgccgcc 778260 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 239 tcctccccgccgccgccgcc 258 |||||||||||||||||||| Sbjct: 4831362 tcctccccgccgccgccgcc 4831343 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 239 tcctccccgccgccgccgcc 258 |||||||||||||||||||| Sbjct: 3853362 tcctccccgccgccgccgcc 3853343 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 79 cgtctcactctctcctccctctcc 102 |||||||| ||||||||||||||| Sbjct: 2486497 cgtctcaccctctcctccctctcc 2486520
>dbj|AP005510.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0009N02 Length = 121142 Score = 125 bits (63), Expect = 2e-25 Identities = 120/139 (86%) Strand = Plus / Minus Query: 373 tgcccgcggtgcagctccagcgacaccaagttctgctactacaacaactacagcatggca 432 ||||| ||||||| ||||| | | ||||||||||||||||||||||||||||||||||| Sbjct: 60042 tgcccccggtgcaactccatcaagaccaagttctgctactacaacaactacagcatggcg 59983 Query: 433 cagccgcgccactactgccgcacatgccgccgctactggacgcacggtggcacgctgcgc 492 ||||||||| ||| ||||||| ||||||||||||||||| || || ||| | || ||| Sbjct: 59982 cagccgcgctacttctgccgcgagtgccgccgctactggacccagggcggctccctccgc 59923 Query: 493 aaggtccccgtcggtggcg 511 || ||||||||||| |||| Sbjct: 59922 aacgtccccgtcggcggcg 59904
>dbj|AK107294.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-126-C02, full insert sequence Length = 1537 Score = 125 bits (63), Expect = 2e-25 Identities = 120/139 (86%) Strand = Plus / Plus Query: 373 tgcccgcggtgcagctccagcgacaccaagttctgctactacaacaactacagcatggca 432 ||||| ||||||| ||||| | | ||||||||||||||||||||||||||||||||||| Sbjct: 235 tgcccccggtgcaactccatcaagaccaagttctgctactacaacaactacagcatggcg 294 Query: 433 cagccgcgccactactgccgcacatgccgccgctactggacgcacggtggcacgctgcgc 492 ||||||||| ||| ||||||| ||||||||||||||||| || || ||| | || ||| Sbjct: 295 cagccgcgctacttctgccgcgagtgccgccgctactggacccagggcggctccctccgc 354 Query: 493 aaggtccccgtcggtggcg 511 || ||||||||||| |||| Sbjct: 355 aacgtccccgtcggcggcg 373
>dbj|AB028131.1| Oryza sativa mRNA for Dof zinc finger protein, complete cds Length = 1572 Score = 125 bits (63), Expect = 2e-25 Identities = 120/139 (86%) Strand = Plus / Plus Query: 373 tgcccgcggtgcagctccagcgacaccaagttctgctactacaacaactacagcatggca 432 ||||| ||||||| ||||| | | ||||||||||||||||||||||||||||||||||| Sbjct: 264 tgcccccggtgcaactccatcaagaccaagttctgctactacaacaactacagcatggcg 323 Query: 433 cagccgcgccactactgccgcacatgccgccgctactggacgcacggtggcacgctgcgc 492 ||||||||| ||| ||||||| ||||||||||||||||| || || ||| | || ||| Sbjct: 324 cagccgcgctacttctgccgcgagtgccgccgctactggacccagggcggctccctccgc 383 Query: 493 aaggtccccgtcggtggcg 511 || ||||||||||| |||| Sbjct: 384 aacgtccccgtcggcggcg 402
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 119 bits (60), Expect = 1e-23 Identities = 117/136 (86%) Strand = Plus / Minus Query: 371 agtgcccgcggtgcagctccagcgacaccaagttctgctactacaacaactacagcatgg 430 |||||||||||||| || || ||||||||||||||||||||||||||||||| || || Sbjct: 24758060 agtgcccgcggtgcgcgtcgagggacaccaagttctgctactacaacaactacaacacgg 24758001 Query: 431 cacagccgcgccactactgccgcacatgccgccgctactggacgcacggtggcacgctgc 490 | |||||||| |||| ||||||| | ||||||||||||||||||| ||| ||| | || | Sbjct: 24758000 cgcagccgcggcacttctgccgcgcctgccgccgctactggacgctcggcggctccctcc 24757941 Query: 491 gcaaggtccccgtcgg 506 |||| |||||| |||| Sbjct: 24757940 gcaacgtccccatcgg 24757925 Score = 81.8 bits (41), Expect = 2e-12 Identities = 108/129 (83%), Gaps = 1/129 (0%) Strand = Plus / Plus Query: 395 acaccaagttctgctactacaacaactacagcatggcacagccgcgccactactgccgca 454 |||||||||||||||||| |||||||||| || | ||||||||||||| |||| Sbjct: 23493275 acaccaagttctgctacttcaacaactactcgctgtcgcagccgcgccacttctgcaagg 23493334 Query: 455 catgccgccgctactggacgcacggtggcacgctgcgcaaggtccccgtcggtggcgcgt 514 | ||||||||||||||||||| ||| ||| || | ||||| ||||||||||| |||| || Sbjct: 23493335 cttgccgccgctactggacgcgcggcggcgcg-tccgcaacgtccccgtcggcggcgggt 23493393 Query: 515 gccgccgca 523 ||||||||| Sbjct: 23493394 gccgccgca 23493402 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 230 ccgcatcgctcctccccgccgccgc 254 ||||||||||||||||||||||||| Sbjct: 19192085 ccgcatcgctcctccccgccgccgc 19192109 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 245 ccgccgccgccgccaagcgcccc 267 ||||||||||||||||||||||| Sbjct: 4862349 ccgccgccgccgccaagcgcccc 4862371 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 237 gctcctccccgccgccgccgcc 258 |||||||||||||||||||||| Sbjct: 20032779 gctcctccccgccgccgccgcc 20032800 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 238 ctcctccccgccgccgccgcc 258 ||||||||||||||||||||| Sbjct: 21275425 ctcctccccgccgccgccgcc 21275445 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 239 tcctccccgccgccgccgcc 258 |||||||||||||||||||| Sbjct: 26674096 tcctccccgccgccgccgcc 26674115 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 238 ctcctccccgccgccgccgc 257 |||||||||||||||||||| Sbjct: 2751280 ctcctccccgccgccgccgc 2751261 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 239 tcctccccgccgccgccgcc 258 |||||||||||||||||||| Sbjct: 1179539 tcctccccgccgccgccgcc 1179520
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 119 bits (60), Expect = 1e-23 Identities = 117/136 (86%) Strand = Plus / Minus Query: 371 agtgcccgcggtgcagctccagcgacaccaagttctgctactacaacaactacagcatgg 430 |||||||||||||| || || ||||||||||||||||||||||||||||||| || || Sbjct: 24686266 agtgcccgcggtgcgcgtcgagggacaccaagttctgctactacaacaactacaacacgg 24686207 Query: 431 cacagccgcgccactactgccgcacatgccgccgctactggacgcacggtggcacgctgc 490 | |||||||| |||| ||||||| | ||||||||||||||||||| ||| ||| | || | Sbjct: 24686206 cgcagccgcggcacttctgccgcgcctgccgccgctactggacgctcggcggctccctcc 24686147 Query: 491 gcaaggtccccgtcgg 506 |||| |||||| |||| Sbjct: 24686146 gcaacgtccccatcgg 24686131 Score = 81.8 bits (41), Expect = 2e-12 Identities = 108/129 (83%), Gaps = 1/129 (0%) Strand = Plus / Plus Query: 395 acaccaagttctgctactacaacaactacagcatggcacagccgcgccactactgccgca 454 |||||||||||||||||| |||||||||| || | ||||||||||||| |||| Sbjct: 23421466 acaccaagttctgctacttcaacaactactcgctgtcgcagccgcgccacttctgcaagg 23421525 Query: 455 catgccgccgctactggacgcacggtggcacgctgcgcaaggtccccgtcggtggcgcgt 514 | ||||||||||||||||||| ||| ||| || | ||||| ||||||||||| |||| || Sbjct: 23421526 cttgccgccgctactggacgcgcggcggcgcg-tccgcaacgtccccgtcggcggcgggt 23421584 Query: 515 gccgccgca 523 ||||||||| Sbjct: 23421585 gccgccgca 23421593 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 230 ccgcatcgctcctccccgccgccgc 254 ||||||||||||||||||||||||| Sbjct: 19118312 ccgcatcgctcctccccgccgccgc 19118336 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 245 ccgccgccgccgccaagcgcccc 267 ||||||||||||||||||||||| Sbjct: 4862331 ccgccgccgccgccaagcgcccc 4862353 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 237 gctcctccccgccgccgccgcc 258 |||||||||||||||||||||| Sbjct: 19958993 gctcctccccgccgccgccgcc 19959014 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 238 ctcctccccgccgccgccgcc 258 ||||||||||||||||||||| Sbjct: 21201634 ctcctccccgccgccgccgcc 21201654 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 239 tcctccccgccgccgccgcc 258 |||||||||||||||||||| Sbjct: 26602265 tcctccccgccgccgccgcc 26602284 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 238 ctcctccccgccgccgccgc 257 |||||||||||||||||||| Sbjct: 2751224 ctcctccccgccgccgccgc 2751205 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 239 tcctccccgccgccgccgcc 258 |||||||||||||||||||| Sbjct: 1179539 tcctccccgccgccgccgcc 1179520
>emb|AL954829.6|CNS08CD5 Oryza sativa chromosome 12, . BAC OSJNBa0044E20 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 140383 Score = 119 bits (60), Expect = 1e-23 Identities = 117/136 (86%) Strand = Plus / Minus Query: 371 agtgcccgcggtgcagctccagcgacaccaagttctgctactacaacaactacagcatgg 430 |||||||||||||| || || ||||||||||||||||||||||||||||||| || || Sbjct: 65217 agtgcccgcggtgcgcgtcgagggacaccaagttctgctactacaacaactacaacacgg 65158 Query: 431 cacagccgcgccactactgccgcacatgccgccgctactggacgcacggtggcacgctgc 490 | |||||||| |||| ||||||| | ||||||||||||||||||| ||| ||| | || | Sbjct: 65157 cgcagccgcggcacttctgccgcgcctgccgccgctactggacgctcggcggctccctcc 65098 Query: 491 gcaaggtccccgtcgg 506 |||| |||||| |||| Sbjct: 65097 gcaacgtccccatcgg 65082
>gb|AC107206.4| Oryza sativa chromosome 3 BAC OSJNBa0063J18 genomic sequence, complete sequence Length = 154558 Score = 115 bits (58), Expect = 2e-22 Identities = 100/114 (87%) Strand = Plus / Minus Query: 393 cgacaccaagttctgctactacaacaactacagcatggcacagccgcgccactactgccg 452 |||||||||||||||||||||||||||||||| || | | ||||||||||||| |||||| Sbjct: 119629 cgacaccaagttctgctactacaacaactacaacacgtcgcagccgcgccacttctgccg 119570 Query: 453 cacatgccgccgctactggacgcacggtggcacgctgcgcaaggtccccgtcgg 506 | | ||||||||||||||||||| ||| ||| | || ||||| |||||| |||| Sbjct: 119569 cgcctgccgccgctactggacgctcggcggctccctccgcaacgtccccatcgg 119516
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 115 bits (58), Expect = 2e-22 Identities = 100/114 (87%) Strand = Plus / Minus Query: 393 cgacaccaagttctgctactacaacaactacagcatggcacagccgcgccactactgccg 452 |||||||||||||||||||||||||||||||| || | | ||||||||||||| |||||| Sbjct: 23283148 cgacaccaagttctgctactacaacaactacaacacgtcgcagccgcgccacttctgccg 23283089 Query: 453 cacatgccgccgctactggacgcacggtggcacgctgcgcaaggtccccgtcgg 506 | | ||||||||||||||||||| ||| ||| | || ||||| |||||| |||| Sbjct: 23283088 cgcctgccgccgctactggacgctcggcggctccctccgcaacgtccccatcgg 23283035 Score = 109 bits (55), Expect = 1e-20 Identities = 127/151 (84%) Strand = Plus / Minus Query: 371 agtgcccgcggtgcagctccagcgacaccaagttctgctactacaacaactacagcatgg 430 |||||||||| ||| ||||| | ||||||||||||||||||||||||||||| | | Sbjct: 9332614 agtgcccgcgctgcgactccaccaacaccaagttctgctactacaacaactactccctct 9332555 Query: 431 cacagccgcgccactactgccgcacatgccgccgctactggacgcacggtggcacgctgc 490 | ||||| ||||||| |||| || ||||||||||||||||||| ||| ||| |||| | Sbjct: 9332554 cccagccccgccacttctgcaagacctgccgccgctactggacgcgcggcggctcgctcc 9332495 Query: 491 gcaaggtccccgtcggtggcgcgtgccgccg 521 |||| ||||||||||| |||| ||||||||| Sbjct: 9332494 gcaacgtccccgtcggcggcgggtgccgccg 9332464 Score = 89.7 bits (45), Expect = 9e-15 Identities = 108/129 (83%) Strand = Plus / Plus Query: 395 acaccaagttctgctactacaacaactacagcatggcacagccgcgccactactgccgca 454 |||||||||||||||||| |||||||||| | | ||||||||||||| |||| | Sbjct: 34151851 acaccaagttctgctacttcaacaactactcgctctcgcagccgcgccacttctgcaaga 34151910 Query: 455 catgccgccgctactggacgcacggtggcacgctgcgcaaggtccccgtcggtggcgcgt 514 | ||||||||||||||||||| ||| || |||| ||||| ||||||||||| |||| || Sbjct: 34151911 cgtgccgccgctactggacgcgcggcggagcgctccgcaacgtccccgtcggcggcgggt 34151970 Query: 515 gccgccgca 523 ||||||||| Sbjct: 34151971 gccgccgca 34151979 Score = 81.8 bits (41), Expect = 2e-12 Identities = 104/125 (83%) Strand = Plus / Minus Query: 395 acaccaagttctgctactacaacaactacagcatggcacagccgcgccactactgccgca 454 |||||||||||||||||||||||||||||| | | | ||||||||||||| |||| | Sbjct: 31359620 acaccaagttctgctactacaacaactacaacctcacccagccgcgccacttctgcaaga 31359561 Query: 455 catgccgccgctactggacgcacggtggcacgctgcgcaaggtccccgtcggtggcgcgt 514 | |||||||| |||||||| | || ||| |||| ||||| |||||| |||| |||| || Sbjct: 31359560 cgtgccgccggtactggaccaagggcggcgcgctccgcaacgtccccatcggcggcgggt 31359501 Query: 515 gccgc 519 ||||| Sbjct: 31359500 gccgc 31359496 Score = 65.9 bits (33), Expect = 1e-07 Identities = 51/57 (89%) Strand = Plus / Plus Query: 394 gacaccaagttctgctactacaacaactacagcatggcacagccgcgccactactgc 450 ||||||||||||||||||||||||||||||| ||| ||||||||||||| |||| Sbjct: 3722018 gacaccaagttctgctactacaacaactacaacatcaaccagccgcgccacttctgc 3722074 Score = 63.9 bits (32), Expect = 5e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 395 acaccaagttctgctactacaacaactacagcatggcacagccgcgccactactgc 450 |||||||||||||||||||||||||||||||| | ||||||||||||| |||| Sbjct: 21407720 acaccaagttctgctactacaacaactacagcctcagccagccgcgccacttctgc 21407775 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 238 ctcctccccgccgccgccgcc 258 ||||||||||||||||||||| Sbjct: 34021197 ctcctccccgccgccgccgcc 34021217 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 238 ctcctccccgccgccgccgcc 258 ||||||||||||||||||||| Sbjct: 29740853 ctcctccccgccgccgccgcc 29740873 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 238 ctcctccccgccgccgccgcc 258 ||||||||||||||||||||| Sbjct: 3444641 ctcctccccgccgccgccgcc 3444661 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 239 tcctccccgccgccgccgcc 258 |||||||||||||||||||| Sbjct: 33670013 tcctccccgccgccgccgcc 33669994 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 239 tcctccccgccgccgccgcc 258 |||||||||||||||||||| Sbjct: 18223213 tcctccccgccgccgccgcc 18223194 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 239 tcctccccgccgccgccgcc 258 |||||||||||||||||||| Sbjct: 11657301 tcctccccgccgccgccgcc 11657320 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 238 ctcctccccgccgccgccgccaag 261 ||||||||| |||||||||||||| Sbjct: 6396730 ctcctcccctccgccgccgccaag 6396753
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 115 bits (58), Expect = 2e-22 Identities = 100/114 (87%) Strand = Plus / Minus Query: 393 cgacaccaagttctgctactacaacaactacagcatggcacagccgcgccactactgccg 452 |||||||||||||||||||||||||||||||| || | | ||||||||||||| |||||| Sbjct: 23276176 cgacaccaagttctgctactacaacaactacaacacgtcgcagccgcgccacttctgccg 23276117 Query: 453 cacatgccgccgctactggacgcacggtggcacgctgcgcaaggtccccgtcgg 506 | | ||||||||||||||||||| ||| ||| | || ||||| |||||| |||| Sbjct: 23276116 cgcctgccgccgctactggacgctcggcggctccctccgcaacgtccccatcgg 23276063 Score = 109 bits (55), Expect = 1e-20 Identities = 127/151 (84%) Strand = Plus / Minus Query: 371 agtgcccgcggtgcagctccagcgacaccaagttctgctactacaacaactacagcatgg 430 |||||||||| ||| ||||| | ||||||||||||||||||||||||||||| | | Sbjct: 9330509 agtgcccgcgctgcgactccaccaacaccaagttctgctactacaacaactactccctct 9330450 Query: 431 cacagccgcgccactactgccgcacatgccgccgctactggacgcacggtggcacgctgc 490 | ||||| ||||||| |||| || ||||||||||||||||||| ||| ||| |||| | Sbjct: 9330449 cccagccccgccacttctgcaagacctgccgccgctactggacgcgcggcggctcgctcc 9330390 Query: 491 gcaaggtccccgtcggtggcgcgtgccgccg 521 |||| ||||||||||| |||| ||||||||| Sbjct: 9330389 gcaacgtccccgtcggcggcgggtgccgccg 9330359 Score = 89.7 bits (45), Expect = 9e-15 Identities = 108/129 (83%) Strand = Plus / Plus Query: 395 acaccaagttctgctactacaacaactacagcatggcacagccgcgccactactgccgca 454 |||||||||||||||||| |||||||||| | | ||||||||||||| |||| | Sbjct: 34242323 acaccaagttctgctacttcaacaactactcgctctcgcagccgcgccacttctgcaaga 34242382 Query: 455 catgccgccgctactggacgcacggtggcacgctgcgcaaggtccccgtcggtggcgcgt 514 | ||||||||||||||||||| ||| || |||| ||||| ||||||||||| |||| || Sbjct: 34242383 cgtgccgccgctactggacgcgcggcggagcgctccgcaacgtccccgtcggcggcgggt 34242442 Query: 515 gccgccgca 523 ||||||||| Sbjct: 34242443 gccgccgca 34242451 Score = 81.8 bits (41), Expect = 2e-12 Identities = 104/125 (83%) Strand = Plus / Minus Query: 395 acaccaagttctgctactacaacaactacagcatggcacagccgcgccactactgccgca 454 |||||||||||||||||||||||||||||| | | | ||||||||||||| |||| | Sbjct: 31450136 acaccaagttctgctactacaacaactacaacctcacccagccgcgccacttctgcaaga 31450077 Query: 455 catgccgccgctactggacgcacggtggcacgctgcgcaaggtccccgtcggtggcgcgt 514 | |||||||| |||||||| | || ||| |||| ||||| |||||| |||| |||| || Sbjct: 31450076 cgtgccgccggtactggaccaagggcggcgcgctccgcaacgtccccatcggcggcgggt 31450017 Query: 515 gccgc 519 ||||| Sbjct: 31450016 gccgc 31450012 Score = 65.9 bits (33), Expect = 1e-07 Identities = 51/57 (89%) Strand = Plus / Plus Query: 394 gacaccaagttctgctactacaacaactacagcatggcacagccgcgccactactgc 450 ||||||||||||||||||||||||||||||| ||| ||||||||||||| |||| Sbjct: 3722129 gacaccaagttctgctactacaacaactacaacatcaaccagccgcgccacttctgc 3722185 Score = 63.9 bits (32), Expect = 5e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 395 acaccaagttctgctactacaacaactacagcatggcacagccgcgccactactgc 450 |||||||||||||||||||||||||||||||| | ||||||||||||| |||| Sbjct: 21400749 acaccaagttctgctactacaacaactacagcctcagccagccgcgccacttctgc 21400804 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 238 ctcctccccgccgccgccgcc 258 ||||||||||||||||||||| Sbjct: 34111669 ctcctccccgccgccgccgcc 34111689 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 238 ctcctccccgccgccgccgcc 258 ||||||||||||||||||||| Sbjct: 29832275 ctcctccccgccgccgccgcc 29832295 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 238 ctcctccccgccgccgccgcc 258 ||||||||||||||||||||| Sbjct: 3444752 ctcctccccgccgccgccgcc 3444772 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 239 tcctccccgccgccgccgcc 258 |||||||||||||||||||| Sbjct: 33760485 tcctccccgccgccgccgcc 33760466 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 239 tcctccccgccgccgccgcc 258 |||||||||||||||||||| Sbjct: 18216754 tcctccccgccgccgccgcc 18216735 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 239 tcctccccgccgccgccgcc 258 |||||||||||||||||||| Sbjct: 11654064 tcctccccgccgccgccgcc 11654083 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 238 ctcctccccgccgccgccgccaag 261 ||||||||| |||||||||||||| Sbjct: 6395943 ctcctcccctccgccgccgccaag 6395966
>dbj|AK119803.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-176-F03, full insert sequence Length = 965 Score = 115 bits (58), Expect = 2e-22 Identities = 100/114 (87%) Strand = Plus / Plus Query: 393 cgacaccaagttctgctactacaacaactacagcatggcacagccgcgccactactgccg 452 |||||||||||||||||||||||||||||||| || | | ||||||||||||| |||||| Sbjct: 225 cgacaccaagttctgctactacaacaactacaacacgtcgcagccgcgccacttctgccg 284 Query: 453 cacatgccgccgctactggacgcacggtggcacgctgcgcaaggtccccgtcgg 506 | | ||||||||||||||||||| ||| ||| | || ||||| |||||| |||| Sbjct: 285 cgcctgccgccgctactggacgctcggcggctccctccgcaacgtccccatcgg 338
>ref|NM_189690.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 648 Score = 113 bits (57), Expect = 6e-22 Identities = 102/117 (87%) Strand = Plus / Plus Query: 395 acaccaagttctgctactacaacaactacagcatggcacagccgcgccactactgccgca 454 |||||||||||||||||||||||||||||| | |||| ||||||||||||| |||| Sbjct: 116 acaccaagttctgctactacaacaactacaacctggcgcagccgcgccacttctgcaagg 175 Query: 455 catgccgccgctactggacgcacggtggcacgctgcgcaaggtccccgtcggtggcg 511 | ||||||||||||||||||| ||| ||| |||| ||||| ||||||||||| |||| Sbjct: 176 cgtgccgccgctactggacgcgcggcggcgcgctccgcaacgtccccgtcggcggcg 232
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 113 bits (57), Expect = 6e-22 Identities = 102/117 (87%) Strand = Plus / Plus Query: 395 acaccaagttctgctactacaacaactacagcatggcacagccgcgccactactgccgca 454 |||||||||||||||||||||||||||||| | |||| ||||||||||||| |||| Sbjct: 5013724 acaccaagttctgctactacaacaactacaacctggcgcagccgcgccacttctgcaagg 5013783 Query: 455 catgccgccgctactggacgcacggtggcacgctgcgcaaggtccccgtcggtggcg 511 | ||||||||||||||||||| ||| ||| |||| ||||| ||||||||||| |||| Sbjct: 5013784 cgtgccgccgctactggacgcgcggcggcgcgctccgcaacgtccccgtcggcggcg 5013840 Score = 77.8 bits (39), Expect = 3e-11 Identities = 87/103 (84%) Strand = Plus / Plus Query: 372 gtgcccgcggtgcagctccagcgacaccaagttctgctactacaacaactacagcatggc 431 ||||||||||||| | ||| || |||||||||||||||| ||||||||||| | || Sbjct: 27670013 gtgcccgcggtgcgggagcagggagaccaagttctgctacttcaacaactacaacgtgcg 27670072 Query: 432 acagccgcgccactactgccgcacatgccgccgctactggacg 474 |||||||||||| ||||||| | |||||||||||||||||| Sbjct: 27670073 gcagccgcgccacctctgccgctcctgccgccgctactggacg 27670115 Score = 65.9 bits (33), Expect = 1e-07 Identities = 96/117 (82%) Strand = Plus / Minus Query: 395 acaccaagttctgctactacaacaactacagcatggcacagccgcgccactactgccgca 454 |||||||||||||||||||||||||||||||| | ||||||||| ||| |||| Sbjct: 37466527 acaccaagttctgctactacaacaactacagcctcagccagccgcgctacttctgcaagg 37466468 Query: 455 catgccgccgctactggacgcacggtggcacgctgcgcaaggtccccgtcggtggcg 511 ||||||||| |||||||| | || ||| |||| ||||| ||||||||||| |||| Sbjct: 37466467 gatgccgccggtactggaccaagggcggctcgctccgcaacgtccccgtcggcggcg 37466411 Score = 65.9 bits (33), Expect = 1e-07 Identities = 93/113 (82%) Strand = Plus / Minus Query: 394 gacaccaagttctgctactacaacaactacagcatggcacagccgcgccactactgccgc 453 ||||||||||||||||||| ||||||||||| | | ||||||||||||| |||| Sbjct: 31844416 gacaccaagttctgctacttcaacaactacaacgtcaaccagccgcgccacttctgcaag 31844357 Query: 454 acatgccgccgctactggacgcacggtggcacgctgcgcaaggtccccgtcgg 506 | |||| ||||||||||||| ||| ||| |||| ||||| ||||||||||| Sbjct: 31844356 gcctgccaccgctactggacggccggcggcgcgctccgcaacgtccccgtcgg 31844304 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Minus Query: 238 ctcctccccgccgccgccgccaagc 262 ||||||||||||||||||||||||| Sbjct: 34553111 ctcctccccgccgccgccgccaagc 34553087 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 238 ctcctccccgccgccgccgcca 259 |||||||||||||||||||||| Sbjct: 3962525 ctcctccccgccgccgccgcca 3962546 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 400 aagttctgctactacaacaactaca 424 ||||||||||||| ||||||||||| Sbjct: 9735521 aagttctgctacttcaacaactaca 9735545 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 238 ctcctccccgccgccgccgcc 258 ||||||||||||||||||||| Sbjct: 4122584 ctcctccccgccgccgccgcc 4122604 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 239 tcctccccgccgccgccgcc 258 |||||||||||||||||||| Sbjct: 41893985 tcctccccgccgccgccgcc 41893966 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 238 ctcctccccgccgccgccgc 257 |||||||||||||||||||| Sbjct: 39947894 ctcctccccgccgccgccgc 39947913 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 239 tcctccccgccgccgccgcc 258 |||||||||||||||||||| Sbjct: 22303520 tcctccccgccgccgccgcc 22303501 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 238 ctcctccccgccgccgccgc 257 |||||||||||||||||||| Sbjct: 3500467 ctcctccccgccgccgccgc 3500448
>dbj|AP002537.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0001B06 Length = 140304 Score = 113 bits (57), Expect = 6e-22 Identities = 102/117 (87%) Strand = Plus / Plus Query: 395 acaccaagttctgctactacaacaactacagcatggcacagccgcgccactactgccgca 454 |||||||||||||||||||||||||||||| | |||| ||||||||||||| |||| Sbjct: 7162 acaccaagttctgctactacaacaactacaacctggcgcagccgcgccacttctgcaagg 7221 Query: 455 catgccgccgctactggacgcacggtggcacgctgcgcaaggtccccgtcggtggcg 511 | ||||||||||||||||||| ||| ||| |||| ||||| ||||||||||| |||| Sbjct: 7222 cgtgccgccgctactggacgcgcggcggcgcgctccgcaacgtccccgtcggcggcg 7278
>dbj|AP002746.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0671B11 Length = 168372 Score = 113 bits (57), Expect = 6e-22 Identities = 102/117 (87%) Strand = Plus / Plus Query: 395 acaccaagttctgctactacaacaactacagcatggcacagccgcgccactactgccgca 454 |||||||||||||||||||||||||||||| | |||| ||||||||||||| |||| Sbjct: 114177 acaccaagttctgctactacaacaactacaacctggcgcagccgcgccacttctgcaagg 114236 Query: 455 catgccgccgctactggacgcacggtggcacgctgcgcaaggtccccgtcggtggcg 511 | ||||||||||||||||||| ||| ||| |||| ||||| ||||||||||| |||| Sbjct: 114237 cgtgccgccgctactggacgcgcggcggcgcgctccgcaacgtccccgtcggcggcg 114293
>gb|AC083942.8| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0002D01, from chromosome 3, complete sequence Length = 187589 Score = 109 bits (55), Expect = 1e-20 Identities = 127/151 (84%) Strand = Plus / Minus Query: 371 agtgcccgcggtgcagctccagcgacaccaagttctgctactacaacaactacagcatgg 430 |||||||||| ||| ||||| | ||||||||||||||||||||||||||||| | | Sbjct: 30014 agtgcccgcgctgcgactccaccaacaccaagttctgctactacaacaactactccctct 29955 Query: 431 cacagccgcgccactactgccgcacatgccgccgctactggacgcacggtggcacgctgc 490 | ||||| ||||||| |||| || ||||||||||||||||||| ||| ||| |||| | Sbjct: 29954 cccagccccgccacttctgcaagacctgccgccgctactggacgcgcggcggctcgctcc 29895 Query: 491 gcaaggtccccgtcggtggcgcgtgccgccg 521 |||| ||||||||||| |||| ||||||||| Sbjct: 29894 gcaacgtccccgtcggcggcgggtgccgccg 29864
>gb|AC137698.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0014A21, from chromosome 3, complete sequence Length = 134014 Score = 109 bits (55), Expect = 1e-20 Identities = 127/151 (84%) Strand = Plus / Plus Query: 371 agtgcccgcggtgcagctccagcgacaccaagttctgctactacaacaactacagcatgg 430 |||||||||| ||| ||||| | ||||||||||||||||||||||||||||| | | Sbjct: 23577 agtgcccgcgctgcgactccaccaacaccaagttctgctactacaacaactactccctct 23636 Query: 431 cacagccgcgccactactgccgcacatgccgccgctactggacgcacggtggcacgctgc 490 | ||||| ||||||| |||| || ||||||||||||||||||| ||| ||| |||| | Sbjct: 23637 cccagccccgccacttctgcaagacctgccgccgctactggacgcgcggcggctcgctcc 23696 Query: 491 gcaaggtccccgtcggtggcgcgtgccgccg 521 |||| ||||||||||| |||| ||||||||| Sbjct: 23697 gcaacgtccccgtcggcggcgggtgccgccg 23727
>emb|AJ000991.1|HVBPBF Hordeum vulgare mRNA for DNA binding protein BPBF Length = 1318 Score = 109 bits (55), Expect = 1e-20 Identities = 127/151 (84%) Strand = Plus / Plus Query: 359 agcagaagctggagtgcccgcggtgcagctccagcgacaccaagttctgctactacaaca 418 |||||||| |||||||||| ||||||| || | |||||||||||||||||||||||| Sbjct: 128 agcagaaggtggagtgccctcggtgcaagtctggtaacaccaagttctgctactacaaca 187 Query: 419 actacagcatggcacagccgcgccactactgccgcacatgccgccgctactggacgcacg 478 ||||||||||| | ||||||||| ||| |||| | ||||||||||||||||| || | Sbjct: 188 actacagcatgtcccagccgcgctacttctgcaaggcctgccgccgctactggacccatg 247 Query: 479 gtggcacgctgcgcaaggtccccgtcggtgg 509 ||||| | || ||||| |||||| ||||||| Sbjct: 248 gtggctccctccgcaacgtccccatcggtgg 278
>gb|AY661659.1| Sorghum bicolor clone BAC 75D9, complete sequence Length = 204120 Score = 99.6 bits (50), Expect = 9e-18 Identities = 74/82 (90%) Strand = Plus / Minus Query: 394 gacaccaagttctgctactacaacaactacagcatggcacagccgcgccactactgccgc 453 ||||||||||||||||||||||||||||||| || ||| |||||||| || | ||||||| Sbjct: 65972 gacaccaagttctgctactacaacaactacaacacggcgcagccgcggcatttctgccgc 65913 Query: 454 acatgccgccgctactggacgc 475 | ||||||||||||||||||| Sbjct: 65912 gcgtgccgccgctactggacgc 65891
>emb|X66076.1|ZMMNB1A Z.mays MNB1a mRNA for DNA-binding protein Length = 1225 Score = 99.6 bits (50), Expect = 9e-18 Identities = 101/118 (85%) Strand = Plus / Plus Query: 394 gacaccaagttctgctactacaacaactacagcatggcacagccgcgccactactgccgc 453 ||||||||||||||||||||||||||||||| || | ||||||||||||| |||| Sbjct: 252 gacaccaagttctgctactacaacaactacaacacctcccagccgcgccacttctgcaag 311 Query: 454 acatgccgccgctactggacgcacggtggcacgctgcgcaaggtccccgtcggtggcg 511 ||||||||||||||||| | ||||||||||||||||| ||||||||||| |||| Sbjct: 312 ggctgccgccgctactggaccaagggtggcacgctgcgcaacgtccccgtcggcggcg 369
>gb|AC079356.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0016H04, complete sequence Length = 176678 Score = 97.6 bits (49), Expect = 4e-17 Identities = 118/141 (83%) Strand = Plus / Minus Query: 371 agtgcccgcggtgcagctccagcgacaccaagttctgctactacaacaactacagcatgg 430 |||||||||| ||| ||||| | |||||||||||||||||| |||||||||| | | Sbjct: 145409 agtgcccgcgctgcgactccaccaacaccaagttctgctacttcaacaactactccctct 145350 Query: 431 cacagccgcgccactactgccgcacatgccgccgctactggacgcacggtggcacgctgc 490 | ||||| ||||||| ||||||| | ||||||||||||||||| | ||| ||| |||| | Sbjct: 145349 cccagccccgccacttctgccgcgcctgccgccgctactggacccgcggcggcgcgctcc 145290 Query: 491 gcaaggtccccgtcggtggcg 511 |||| ||||||||||| |||| Sbjct: 145289 gcaacgtccccgtcggcggcg 145269
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 97.6 bits (49), Expect = 4e-17 Identities = 118/141 (83%) Strand = Plus / Minus Query: 371 agtgcccgcggtgcagctccagcgacaccaagttctgctactacaacaactacagcatgg 430 |||||||||| ||| ||||| | |||||||||||||||||| |||||||||| | | Sbjct: 628010 agtgcccgcgctgcgactccaccaacaccaagttctgctacttcaacaactactccctct 627951 Query: 431 cacagccgcgccactactgccgcacatgccgccgctactggacgcacggtggcacgctgc 490 | ||||| ||||||| ||||||| | ||||||||||||||||| | ||| ||| |||| | Sbjct: 627950 cccagccccgccacttctgccgcgcctgccgccgctactggacccgcggcggcgcgctcc 627891 Query: 491 gcaaggtccccgtcggtggcg 511 |||| ||||||||||| |||| Sbjct: 627890 gcaacgtccccgtcggcggcg 627870 Score = 63.9 bits (32), Expect = 5e-07 Identities = 32/32 (100%) Strand = Plus / Plus Query: 395 acaccaagttctgctactacaacaactacagc 426 |||||||||||||||||||||||||||||||| Sbjct: 21410547 acaccaagttctgctactacaacaactacagc 21410578 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 243 ccccgccgccgccgccaagc 262 |||||||||||||||||||| Sbjct: 20581108 ccccgccgccgccgccaagc 20581089 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 239 tcctccccgccgccgccgcc 258 |||||||||||||||||||| Sbjct: 19904528 tcctccccgccgccgccgcc 19904547 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 236 cgctcctccccgccgccgccgcca 259 ||||||| |||||||||||||||| Sbjct: 8034999 cgctccttcccgccgccgccgcca 8035022
>dbj|AK108933.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-153-A09, full insert sequence Length = 1520 Score = 97.6 bits (49), Expect = 4e-17 Identities = 118/141 (83%) Strand = Plus / Plus Query: 371 agtgcccgcggtgcagctccagcgacaccaagttctgctactacaacaactacagcatgg 430 |||||||||| ||| ||||| | |||||||||||||||||| |||||||||| | | Sbjct: 276 agtgcccgcgctgcgactccaccaacaccaagttctgctacttcaacaactactccctct 335 Query: 431 cacagccgcgccactactgccgcacatgccgccgctactggacgcacggtggcacgctgc 490 | ||||| ||||||| ||||||| | ||||||||||||||||| | ||| ||| |||| | Sbjct: 336 cccagccccgccacttctgccgcgcctgccgccgctactggacccgcggcggcgcgctcc 395 Query: 491 gcaaggtccccgtcggtggcg 511 |||| ||||||||||| |||| Sbjct: 396 gcaacgtccccgtcggcggcg 416
>emb|AL731784.3|CNS08C88 Oryza sativa chromosome 12, . BAC OSJNBa0016C14 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 162261 Score = 97.6 bits (49), Expect = 4e-17 Identities = 109/129 (84%) Strand = Plus / Minus Query: 395 acaccaagttctgctactacaacaactacagcatggcacagccgcgccactactgccgca 454 |||||||||||||||||| |||||||||| || | ||||||||||||| |||| Sbjct: 8885 acaccaagttctgctacttcaacaactactcgctgtcgcagccgcgccacttctgcaagg 8826 Query: 455 catgccgccgctactggacgcacggtggcacgctgcgcaaggtccccgtcggtggcgcgt 514 | ||||||||||||||||||| ||| ||| |||| ||||| ||||||||||| |||| || Sbjct: 8825 cttgccgccgctactggacgcgcggcggcgcgctccgcaacgtccccgtcggcggcgggt 8766 Query: 515 gccgccgca 523 ||||||||| Sbjct: 8765 gccgccgca 8757
>dbj|AP005885.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0657H12 Length = 142688 Score = 93.7 bits (47), Expect = 6e-16 Identities = 116/139 (83%) Strand = Plus / Minus Query: 373 tgcccgcggtgcagctccagcgacaccaagttctgctactacaacaactacagcatggca 432 ||||||||||||| ||| | |||||||||||||||||||||||||||||||| | Sbjct: 47338 tgcccgcggtgcaactcgacgaacaccaagttctgctactacaacaactacagcctccag 47279 Query: 433 cagccgcgccactactgccgcacatgccgccgctactggacgcacggtggcacgctgcgc 492 ||||||||| ||| |||| || |||||||||||||||||| | || ||| |||| ||| Sbjct: 47278 cagccgcgctacttctgcaagacgtgccgccgctactggacggagggcggctcgctccgc 47219 Query: 493 aaggtccccgtcggtggcg 511 || ||||||||||| |||| Sbjct: 47218 aacgtccccgtcggcggcg 47200
>dbj|AK120810.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023014F11, full insert sequence Length = 1744 Score = 93.7 bits (47), Expect = 6e-16 Identities = 116/139 (83%) Strand = Plus / Plus Query: 373 tgcccgcggtgcagctccagcgacaccaagttctgctactacaacaactacagcatggca 432 ||||||||||||| ||| | |||||||||||||||||||||||||||||||| | Sbjct: 340 tgcccgcggtgcaactcgacgaacaccaagttctgctactacaacaactacagcctccag 399 Query: 433 cagccgcgccactactgccgcacatgccgccgctactggacgcacggtggcacgctgcgc 492 ||||||||| ||| |||| || |||||||||||||||||| | || ||| |||| ||| Sbjct: 400 cagccgcgctacttctgcaagacgtgccgccgctactggacggagggcggctcgctccgc 459 Query: 493 aaggtccccgtcggtggcg 511 || ||||||||||| |||| Sbjct: 460 aacgtccccgtcggcggcg 478
>dbj|AB028130.1| Oryza sativa mRNA for Dof zinc finger protein, complete cds Length = 1550 Score = 93.7 bits (47), Expect = 6e-16 Identities = 116/139 (83%) Strand = Plus / Plus Query: 373 tgcccgcggtgcagctccagcgacaccaagttctgctactacaacaactacagcatggca 432 ||||||||||||| ||| | |||||||||||||||||||||||||||||||| | Sbjct: 468 tgcccgcggtgcaactcgacgaacaccaagttctgctactacaacaactacagcctccag 527 Query: 433 cagccgcgccactactgccgcacatgccgccgctactggacgcacggtggcacgctgcgc 492 ||||||||| ||| |||| || |||||||||||||||||| | || ||| |||| ||| Sbjct: 528 cagccgcgctacttctgcaagacgtgccgccgctactggacggagggcggctcgctccgc 587 Query: 493 aaggtccccgtcggtggcg 511 || ||||||||||| |||| Sbjct: 588 aacgtccccgtcggcggcg 606
>gb|DQ490965.1| Mutant Zea mays clone pGR25C22 disrupted DOF1 (Dof1) gene, promoter region and complete cds Length = 12502 Score = 91.7 bits (46), Expect = 2e-15 Identities = 100/118 (84%) Strand = Plus / Plus Query: 394 gacaccaagttctgctactacaacaactacagcatggcacagccgcgccactactgccgc 453 ||||||||||||||||||||||||||||||| || | ||||||||||||| |||| Sbjct: 9114 gacaccaagttctgctactacaacaactacaacacctcccagccgcgccacttctgcaag 9173 Query: 454 acatgccgccgctactggacgcacggtggcacgctgcgcaaggtccccgtcggtggcg 511 ||||||||||||||||| | || |||||||||||||| ||||||||||| |||| Sbjct: 9174 ggctgccgccgctactggaccaagggcggcacgctgcgcaacgtccccgtcggcggcg 9231
>ref|XM_470142.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1068 Score = 89.7 bits (45), Expect = 9e-15 Identities = 108/129 (83%) Strand = Plus / Plus Query: 395 acaccaagttctgctactacaacaactacagcatggcacagccgcgccactactgccgca 454 |||||||||||||||||| |||||||||| | | ||||||||||||| |||| | Sbjct: 203 acaccaagttctgctacttcaacaactactcgctctcgcagccgcgccacttctgcaaga 262 Query: 455 catgccgccgctactggacgcacggtggcacgctgcgcaaggtccccgtcggtggcgcgt 514 | ||||||||||||||||||| ||| || |||| ||||| ||||||||||| |||| || Sbjct: 263 cgtgccgccgctactggacgcgcggcggagcgctccgcaacgtccccgtcggcggcgggt 322 Query: 515 gccgccgca 523 ||||||||| Sbjct: 323 gccgccgca 331
>gb|AC104433.8| Oryza sativa chromosome 3 BAC OJ1754_E06 genomic sequence, complete sequence Length = 163828 Score = 89.7 bits (45), Expect = 9e-15 Identities = 108/129 (83%) Strand = Plus / Plus Query: 395 acaccaagttctgctactacaacaactacagcatggcacagccgcgccactactgccgca 454 |||||||||||||||||| |||||||||| | | ||||||||||||| |||| | Sbjct: 115663 acaccaagttctgctacttcaacaactactcgctctcgcagccgcgccacttctgcaaga 115722 Query: 455 catgccgccgctactggacgcacggtggcacgctgcgcaaggtccccgtcggtggcgcgt 514 | ||||||||||||||||||| ||| || |||| ||||| ||||||||||| |||| || Sbjct: 115723 cgtgccgccgctactggacgcgcggcggagcgctccgcaacgtccccgtcggcggcgggt 115782 Query: 515 gccgccgca 523 ||||||||| Sbjct: 115783 gccgccgca 115791
>emb|AJ312331.1|HVU312331 Hordeum vulgare partial dof172 gene for dof zinc finger protein, exon 1 Length = 534 Score = 89.7 bits (45), Expect = 9e-15 Identities = 99/117 (84%) Strand = Plus / Plus Query: 395 acaccaagttctgctactacaacaactacagcatggcacagccgcgccactactgccgca 454 |||||||||||||||||||||||||||||||| || | ||||||||||||| |||| | Sbjct: 116 acaccaagttctgctactacaacaactacagcctgtcgcagccgcgccacttctgcaaga 175 Query: 455 catgccgccgctactggacgcacggtggcacgctgcgcaaggtccccgtcggtggcg 511 ||||||| || |||||||| | || ||| |||| |||| ||||||||||| |||| Sbjct: 176 catgccggcggtactggaccaagggcggcgcgctccgcagcgtccccgtcggcggcg 232
>ref|XM_473536.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1083 Score = 85.7 bits (43), Expect = 1e-13 Identities = 115/139 (82%) Strand = Plus / Plus Query: 373 tgcccgcggtgcagctccagcgacaccaagttctgctactacaacaactacagcatggca 432 ||||||||||||| ||| | |||||||||||||||||||||||||||||||| | Sbjct: 184 tgcccgcggtgcaactcgacgaacaccaagttctgctactacaacaactacagcctccag 243 Query: 433 cagccgcgccactactgccgcacatgccgccgctactggacgcacggtggcacgctgcgc 492 ||||||||| ||| |||| || ||||| |||||||||||| | || ||| |||| ||| Sbjct: 244 cagccgcgctacttctgcaagacgtgccggcgctactggacggagggcggctcgctccgc 303 Query: 493 aaggtccccgtcggtggcg 511 || ||||||||||| |||| Sbjct: 304 aacgtccccgtcggcggcg 322
>emb|AL663003.2|OSJN00203 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0032E06, complete sequence Length = 125196 Score = 85.7 bits (43), Expect = 1e-13 Identities = 115/139 (82%) Strand = Plus / Minus Query: 373 tgcccgcggtgcagctccagcgacaccaagttctgctactacaacaactacagcatggca 432 ||||||||||||| ||| | |||||||||||||||||||||||||||||||| | Sbjct: 212 tgcccgcggtgcaactcgacgaacaccaagttctgctactacaacaactacagcctccag 153 Query: 433 cagccgcgccactactgccgcacatgccgccgctactggacgcacggtggcacgctgcgc 492 ||||||||| ||| |||| || ||||| |||||||||||| | || ||| |||| ||| Sbjct: 152 cagccgcgctacttctgcaagacgtgccggcgctactggacggagggcggctcgctccgc 93 Query: 493 aaggtccccgtcggtggcg 511 || ||||||||||| |||| Sbjct: 92 aacgtccccgtcggcggcg 74
>emb|AL662954.2|OSJN00155 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0005N02, complete sequence Length = 175163 Score = 85.7 bits (43), Expect = 1e-13 Identities = 115/139 (82%) Strand = Plus / Minus Query: 373 tgcccgcggtgcagctccagcgacaccaagttctgctactacaacaactacagcatggca 432 ||||||||||||| ||| | |||||||||||||||||||||||||||||||| | Sbjct: 158097 tgcccgcggtgcaactcgacgaacaccaagttctgctactacaacaactacagcctccag 158038 Query: 433 cagccgcgccactactgccgcacatgccgccgctactggacgcacggtggcacgctgcgc 492 ||||||||| ||| |||| || ||||| |||||||||||| | || ||| |||| ||| Sbjct: 158037 cagccgcgctacttctgcaagacgtgccggcgctactggacggagggcggctcgctccgc 157978 Query: 493 aaggtccccgtcggtggcg 511 || ||||||||||| |||| Sbjct: 157977 aacgtccccgtcggcggcg 157959
>emb|AJ012284.1|TAE012284 Triticum aestivum mRNA for DNA binding protein PBF, partial Length = 993 Score = 85.7 bits (43), Expect = 1e-13 Identities = 124/151 (82%) Strand = Plus / Plus Query: 359 agcagaagctggagtgcccgcggtgcagctccagcgacaccaagttctgctactacaaca 418 |||||||| |||| ||||| ||||||| || || |||||||||||||||||||||||| Sbjct: 98 agcagaaggtggaatgccctcggtgcaagtctggcaacaccaagttctgctactacaaca 157 Query: 419 actacagcatggcacagccgcgccactactgccgcacatgccgccgctactggacgcacg 478 |||| || ||| | ||||| ||| ||| |||| | ||||||||||||||||| || | Sbjct: 158 actatagtatgtctcagccccgctacttctgcaaggcctgccgccgctactggacccatg 217 Query: 479 gtggcacgctgcgcaaggtccccgtcggtgg 509 ||||| | || ||||| |||||| ||||||| Sbjct: 218 gtggctccctccgcaacgtccccatcggtgg 248
>dbj|AK060659.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-028-A11, full insert sequence Length = 1556 Score = 85.7 bits (43), Expect = 1e-13 Identities = 115/139 (82%) Strand = Plus / Plus Query: 373 tgcccgcggtgcagctccagcgacaccaagttctgctactacaacaactacagcatggca 432 ||||||||||||| ||| | |||||||||||||||||||||||||||||||| | Sbjct: 321 tgcccgcggtgcaactcgacgaacaccaagttctgctactacaacaactacagcctccag 380 Query: 433 cagccgcgccactactgccgcacatgccgccgctactggacgcacggtggcacgctgcgc 492 ||||||||| ||| |||| || ||||| |||||||||||| | || ||| |||| ||| Sbjct: 381 cagccgcgctacttctgcaagacgtgccggcgctactggacggagggcggctcgctccgc 440 Query: 493 aaggtccccgtcggtggcg 511 || ||||||||||| |||| Sbjct: 441 aacgtccccgtcggcggcg 459
>gb|AY496057.2| Triticum aestivum Dof DNA-binding protein mRNA, complete cds Length = 1279 Score = 85.7 bits (43), Expect = 1e-13 Identities = 124/151 (82%) Strand = Plus / Plus Query: 359 agcagaagctggagtgcccgcggtgcagctccagcgacaccaagttctgctactacaaca 418 |||||||| |||| ||||| ||||||| || || |||||||||||||||||||||||| Sbjct: 141 agcagaaggtggaatgccctcggtgcaagtctggcaacaccaagttctgctactacaaca 200 Query: 419 actacagcatggcacagccgcgccactactgccgcacatgccgccgctactggacgcacg 478 |||| || ||| | ||||| ||| ||| |||| | ||||||||||||||||| || | Sbjct: 201 actatagtatgtctcagccccgctacttctgcaaggcctgccgccgctactggacccatg 260 Query: 479 gtggcacgctgcgcaaggtccccgtcggtgg 509 ||||| | || ||||| |||||| ||||||| Sbjct: 261 gtggctccctccgcaacgtccccatcggtgg 291
>dbj|AB028129.1| Oryza sativa mRNA for Dof zinc finger protein, complete cds Length = 2316 Score = 85.7 bits (43), Expect = 1e-13 Identities = 115/139 (82%) Strand = Plus / Plus Query: 373 tgcccgcggtgcagctccagcgacaccaagttctgctactacaacaactacagcatggca 432 ||||||||||||| ||| | |||||||||||||||||||||||||||||||| | Sbjct: 458 tgcccgcggtgcaactcgacgaacaccaagttctgctactacaacaactacagcctccag 517 Query: 433 cagccgcgccactactgccgcacatgccgccgctactggacgcacggtggcacgctgcgc 492 ||||||||| ||| |||| || ||||| |||||||||||| | || ||| |||| ||| Sbjct: 518 cagccgcgctacttctgcaagacgtgccggcgctactggacggagggcggctcgctccgc 577 Query: 493 aaggtccccgtcggtggcg 511 || ||||||||||| |||| Sbjct: 578 aacgtccccgtcggcggcg 596
>gb|AY111473.1| Zea mays CL830_1 mRNA sequence Length = 1414 Score = 83.8 bits (42), Expect = 6e-13 Identities = 102/122 (83%) Strand = Plus / Plus Query: 373 tgcccgcggtgcagctccagcgacaccaagttctgctactacaacaactacagcatggca 432 |||||||| ||| ||||| | |||| ||||||||||||||||||||||||| | || | Sbjct: 167 tgcccgcgctgctcctccaccaacacaaagttctgctactacaacaactacaacctgacg 226 Query: 433 cagccgcgccactactgccgcacatgccgccgctactggacgcacggtggcacgctgcgc 492 ||||||||| ||| |||| || ||||||||||||||||| ||||| ||||| || ||| Sbjct: 227 cagccgcgctacttctgcaagacgtgccgccgctactggacacacggcggcaccctccgc 286 Query: 493 aa 494 || Sbjct: 287 aa 288
>ref|XM_469889.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1415 Score = 81.8 bits (41), Expect = 2e-12 Identities = 104/125 (83%) Strand = Plus / Plus Query: 395 acaccaagttctgctactacaacaactacagcatggcacagccgcgccactactgccgca 454 |||||||||||||||||||||||||||||| | | | ||||||||||||| |||| | Sbjct: 233 acaccaagttctgctactacaacaactacaacctcacccagccgcgccacttctgcaaga 292 Query: 455 catgccgccgctactggacgcacggtggcacgctgcgcaaggtccccgtcggtggcgcgt 514 | |||||||| |||||||| | || ||| |||| ||||| |||||| |||| |||| || Sbjct: 293 cgtgccgccggtactggaccaagggcggcgcgctccgcaacgtccccatcggcggcgggt 352 Query: 515 gccgc 519 ||||| Sbjct: 353 gccgc 357
>gb|AF542507.1| Oryza sativa Dof-like protein 34 mRNA, partial cds Length = 1134 Score = 81.8 bits (41), Expect = 2e-12 Identities = 98/117 (83%) Strand = Plus / Plus Query: 395 acaccaagttctgctactacaacaactacagcatggcacagccgcgccactactgccgca 454 |||||||||||||||||||||||||||||||| | | ||||||||| ||| |||| | Sbjct: 158 acaccaagttctgctactacaacaactacagcctctcgcagccgcgctacttctgcaaga 217 Query: 455 catgccgccgctactggacgcacggtggcacgctgcgcaaggtccccgtcggtggcg 511 | ||||||||||||||||| | || ||| |||| || || ||||||||||| |||| Sbjct: 218 cgtgccgccgctactggaccaagggcggctcgctccggaacgtccccgtcggcggcg 274
>gb|AC099043.6| Oryza sativa chromosome 3 BAC OSJNBa0079B15 genomic sequence, complete sequence Length = 159091 Score = 81.8 bits (41), Expect = 2e-12 Identities = 104/125 (83%) Strand = Plus / Plus Query: 395 acaccaagttctgctactacaacaactacagcatggcacagccgcgccactactgccgca 454 |||||||||||||||||||||||||||||| | | | ||||||||||||| |||| | Sbjct: 136180 acaccaagttctgctactacaacaactacaacctcacccagccgcgccacttctgcaaga 136239 Query: 455 catgccgccgctactggacgcacggtggcacgctgcgcaaggtccccgtcggtggcgcgt 514 | |||||||| |||||||| | || ||| |||| ||||| |||||| |||| |||| || Sbjct: 136240 cgtgccgccggtactggaccaagggcggcgcgctccgcaacgtccccatcggcggcgggt 136299 Query: 515 gccgc 519 ||||| Sbjct: 136300 gccgc 136304
>emb|AJ312326.1|HVU312326 Hordeum vulgare dof140 gene for dof zinc finger protein Length = 795 Score = 81.8 bits (41), Expect = 2e-12 Identities = 98/117 (83%) Strand = Plus / Plus Query: 395 acaccaagttctgctactacaacaactacagcatggcacagccgcgccactactgccgca 454 |||||||||||||||||| |||||||||| | | | ||||| ||||||| |||||| Sbjct: 257 acaccaagttctgctacttcaacaactactccctcacgcagccccgccacttttgccgcg 316 Query: 455 catgccgccgctactggacgcacggtggcacgctgcgcaaggtccccgtcggtggcg 511 ||||||||||||||||||| | ||||||| |||| ||||| ||||| | ||||||| Sbjct: 317 catgccgccgctactggacccgcggtggcgcgctccgcaacatccccattggtggcg 373
>emb|X79935.1|ZMDOF3 Z.mays Dof3 mRNA Length = 1230 Score = 81.8 bits (41), Expect = 2e-12 Identities = 98/117 (83%) Strand = Plus / Plus Query: 395 acaccaagttctgctactacaacaactacagcatggcacagccgcgccactactgccgca 454 |||||||||||||||||| |||||||||| | | | ||||||||||||| |||||| Sbjct: 123 acaccaagttctgctacttcaacaactactccctcacgcagccgcgccacttctgccggg 182 Query: 455 catgccgccgctactggacgcacggtggcacgctgcgcaaggtccccgtcggtggcg 511 | ||||||||||||||||||| || ||| |||| ||||| || || |||||||||| Sbjct: 183 cctgccgccgctactggacgcgtggcggcgcgctccgcaacgtgccggtcggtggcg 239
>dbj|AK063380.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-114-F11, full insert sequence Length = 1626 Score = 81.8 bits (41), Expect = 2e-12 Identities = 104/125 (83%) Strand = Plus / Plus Query: 395 acaccaagttctgctactacaacaactacagcatggcacagccgcgccactactgccgca 454 |||||||||||||||||||||||||||||| | | | ||||||||||||| |||| | Sbjct: 415 acaccaagttctgctactacaacaactacaacctcacccagccgcgccacttctgcaaga 474 Query: 455 catgccgccgctactggacgcacggtggcacgctgcgcaaggtccccgtcggtggcgcgt 514 | |||||||| |||||||| | || ||| |||| ||||| |||||| |||| |||| || Sbjct: 475 cgtgccgccggtactggaccaagggcggcgcgctccgcaacgtccccatcggcggcgggt 534 Query: 515 gccgc 519 ||||| Sbjct: 535 gccgc 539
>emb|AL845346.4|CNS08CB8 Oryza sativa chromosome 12, . BAC OSJNBa0018E22 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 69273 Score = 81.8 bits (41), Expect = 2e-12 Identities = 108/129 (83%), Gaps = 1/129 (0%) Strand = Plus / Plus Query: 395 acaccaagttctgctactacaacaactacagcatggcacagccgcgccactactgccgca 454 |||||||||||||||||| |||||||||| || | ||||||||||||| |||| Sbjct: 13823 acaccaagttctgctacttcaacaactactcgctgtcgcagccgcgccacttctgcaagg 13882 Query: 455 catgccgccgctactggacgcacggtggcacgctgcgcaaggtccccgtcggtggcgcgt 514 | ||||||||||||||||||| ||| ||| || | ||||| ||||||||||| |||| || Sbjct: 13883 cttgccgccgctactggacgcgcggcggcgcg-tccgcaacgtccccgtcggcggcgggt 13941 Query: 515 gccgccgca 523 ||||||||| Sbjct: 13942 gccgccgca 13950
>gb|AY955493.2| Triticum aestivum Dof1 mRNA, complete cds Length = 1000 Score = 79.8 bits (40), Expect = 9e-12 Identities = 70/80 (87%) Strand = Plus / Plus Query: 371 agtgcccgcggtgcagctccagcgacaccaagttctgctactacaacaactacagcatgg 430 |||||||||||||| |||| | |||||||||||||||||||||||||||||| | || Sbjct: 247 agtgcccgcggtgcgagtccaccaacaccaagttctgctactacaacaactacaacctgt 306 Query: 431 cacagccgcgccactactgc 450 | ||||||||||||| |||| Sbjct: 307 cgcagccgcgccacttctgc 326
>ref|NM_191985.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 528 Score = 77.8 bits (39), Expect = 3e-11 Identities = 87/103 (84%) Strand = Plus / Plus Query: 372 gtgcccgcggtgcagctccagcgacaccaagttctgctactacaacaactacagcatggc 431 ||||||||||||| | ||| || |||||||||||||||| ||||||||||| | || Sbjct: 255 gtgcccgcggtgcgggagcagggagaccaagttctgctacttcaacaactacaacgtgcg 314 Query: 432 acagccgcgccactactgccgcacatgccgccgctactggacg 474 |||||||||||| ||||||| | |||||||||||||||||| Sbjct: 315 gcagccgcgccacctctgccgctcctgccgccgctactggacg 357
>dbj|AP003264.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0485G01 Length = 167203 Score = 77.8 bits (39), Expect = 3e-11 Identities = 87/103 (84%) Strand = Plus / Plus Query: 372 gtgcccgcggtgcagctccagcgacaccaagttctgctactacaacaactacagcatggc 431 ||||||||||||| | ||| || |||||||||||||||| ||||||||||| | || Sbjct: 78579 gtgcccgcggtgcgggagcagggagaccaagttctgctacttcaacaactacaacgtgcg 78638 Query: 432 acagccgcgccactactgccgcacatgccgccgctactggacg 474 |||||||||||| ||||||| | |||||||||||||||||| Sbjct: 78639 gcagccgcgccacctctgccgctcctgccgccgctactggacg 78681
>dbj|AP003223.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0007F06 Length = 150817 Score = 77.8 bits (39), Expect = 3e-11 Identities = 87/103 (84%) Strand = Plus / Plus Query: 372 gtgcccgcggtgcagctccagcgacaccaagttctgctactacaacaactacagcatggc 431 ||||||||||||| | ||| || |||||||||||||||| ||||||||||| | || Sbjct: 137307 gtgcccgcggtgcgggagcagggagaccaagttctgctacttcaacaactacaacgtgcg 137366 Query: 432 acagccgcgccactactgccgcacatgccgccgctactggacg 474 |||||||||||| ||||||| | |||||||||||||||||| Sbjct: 137367 gcagccgcgccacctctgccgctcctgccgccgctactggacg 137409
>emb|AJ312297.1|HVU312297 Hordeum vulgare sed gene for dof zinc finger protein, exons 1-2 Length = 4727 Score = 77.8 bits (39), Expect = 3e-11 Identities = 114/139 (82%) Strand = Plus / Plus Query: 373 tgcccgcggtgcagctccagcgacaccaagttctgctactacaacaactacagcatggca 432 |||||| |||||| ||| | | |||||||||||||||||||||||||||||||| | Sbjct: 3662 tgcccgaggtgcaactctaccaacaccaagttctgctactacaacaactacagcctccag 3721 Query: 433 cagccgcgccactactgccgcacatgccgccgctactggacgcacggtggcacgctgcgc 492 ||||||||| ||| |||| || ||||||||||||||||| | || ||| |||| ||| Sbjct: 3722 cagccgcgctacttctgcaagacgtgccgccgctactggaccgagggcggctcgctccgc 3781 Query: 493 aaggtccccgtcggtggcg 511 || || |||||||| |||| Sbjct: 3782 aacgtgcccgtcggcggcg 3800
>emb|AJ276357.1|HVU276357 Hordeum vulgare mRNA for dof zinc finger protein (sed gene) Length = 1555 Score = 77.8 bits (39), Expect = 3e-11 Identities = 114/139 (82%) Strand = Plus / Plus Query: 373 tgcccgcggtgcagctccagcgacaccaagttctgctactacaacaactacagcatggca 432 |||||| |||||| ||| | | |||||||||||||||||||||||||||||||| | Sbjct: 457 tgcccgaggtgcaactctaccaacaccaagttctgctactacaacaactacagcctccag 516 Query: 433 cagccgcgccactactgccgcacatgccgccgctactggacgcacggtggcacgctgcgc 492 ||||||||| ||| |||| || ||||||||||||||||| | || ||| |||| ||| Sbjct: 517 cagccgcgctacttctgcaagacgtgccgccgctactggaccgagggcggctcgctccgc 576 Query: 493 aaggtccccgtcggtggcg 511 || || |||||||| |||| Sbjct: 577 aacgtgcccgtcggcggcg 595
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 75.8 bits (38), Expect = 1e-10 Identities = 98/118 (83%) Strand = Plus / Plus Query: 394 gacaccaagttctgctactacaacaactacagcatggcacagccgcgccactactgccgc 453 ||||||||||||||||||||||||||||||| || | | |||||||| |||| |||| Sbjct: 18180471 gacaccaagttctgctactacaacaactacaacacgtcgcagccgcggcacttctgcaag 18180530 Query: 454 acatgccgccgctactggacgcacggtggcacgctgcgcaaggtccccgtcggtggcg 511 | ||||||||||||||||| | || ||| | || ||||| ||||||||||| |||| Sbjct: 18180531 tcgtgccgccgctactggaccaagggcggctccctccgcaacgtccccgtcggcggcg 18180588 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 237 gctcctccccgccgccgccgcc 258 |||||||||||||||||||||| Sbjct: 16030578 gctcctccccgccgccgccgcc 16030599 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 245 ccgccgccgccgccaagcgcc 265 ||||||||||||||||||||| Sbjct: 16768270 ccgccgccgccgccaagcgcc 16768250 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 240 cctccccgccgccgccgcca 259 |||||||||||||||||||| Sbjct: 11881126 cctccccgccgccgccgcca 11881107 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 512 cgtgccgccgcagctccggcaaca 535 ||||||||||| |||||||||||| Sbjct: 4206584 cgtgccgccgccgctccggcaaca 4206607
>dbj|AP005759.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0556A05 Length = 158189 Score = 75.8 bits (38), Expect = 1e-10 Identities = 98/118 (83%) Strand = Plus / Plus Query: 394 gacaccaagttctgctactacaacaactacagcatggcacagccgcgccactactgccgc 453 ||||||||||||||||||||||||||||||| || | | |||||||| |||| |||| Sbjct: 29195 gacaccaagttctgctactacaacaactacaacacgtcgcagccgcggcacttctgcaag 29254 Query: 454 acatgccgccgctactggacgcacggtggcacgctgcgcaaggtccccgtcggtggcg 511 | ||||||||||||||||| | || ||| | || ||||| ||||||||||| |||| Sbjct: 29255 tcgtgccgccgctactggaccaagggcggctccctccgcaacgtccccgtcggcggcg 29312
>emb|AJ312327.1|HVU312327 Hordeum vulgare dof155 gene for dof zinc finger protein Length = 986 Score = 75.8 bits (38), Expect = 1e-10 Identities = 92/110 (83%) Strand = Plus / Plus Query: 366 gctggagtgcccgcggtgcagctccagcgacaccaagttctgctactacaacaactacag 425 |||| |||||||||||||| ||||| | ||||||| ||||||||||||||||||||| Sbjct: 162 gctgaagtgcccgcggtgcgactccaccaacaccaaattctgctactacaacaactactc 221 Query: 426 catggcacagccgcgccactactgccgcacatgccgccgctactggacgc 475 | | | ||||| ||||||| |||| ||||||||||||||||||||| Sbjct: 222 cctctcgcagccccgccacttctgcaaggcatgccgccgctactggacgc 271
>emb|X79934.1|ZMDOF2 Z.mays Dof2 mRNA Length = 1037 Score = 75.8 bits (38), Expect = 1e-10 Identities = 65/74 (87%) Strand = Plus / Plus Query: 372 gtgcccgcggtgcagctccagcgacaccaagttctgctactacaacaactacagcatggc 431 ||||||||||||| | || | ||||||||||||||||||||||||||||||| || | | Sbjct: 59 gtgcccgcggtgcgggtcgcgggacaccaagttctgctactacaacaactacaacacgtc 118 Query: 432 acagccgcgccact 445 ||||||||||||| Sbjct: 119 gcagccgcgccact 132
>ref|XM_467389.1| Oryza sativa (japonica cultivar-group), mRNA Length = 900 Score = 73.8 bits (37), Expect = 5e-10 Identities = 97/117 (82%) Strand = Plus / Plus Query: 395 acaccaagttctgctactacaacaactacagcatggcacagccgcgccactactgccgca 454 |||||||||||||||||||||| ||||||||| | | ||||||||| ||| |||| | Sbjct: 182 acaccaagttctgctactacaataactacagcctctcgcagccgcgctacttctgcaaga 241 Query: 455 catgccgccgctactggacgcacggtggcacgctgcgcaaggtccccgtcggtggcg 511 | ||||||||||||||||| | || ||| |||| || || ||||||||||| |||| Sbjct: 242 cgtgccgccgctactggaccaagggcggctcgctccggaacgtccccgtcggcggcg 298
>gb|AF480496.1| Oryza sativa clone BAC 49D11, complete sequence Length = 158050 Score = 73.8 bits (37), Expect = 5e-10 Identities = 97/117 (82%) Strand = Plus / Plus Query: 395 acaccaagttctgctactacaacaactacagcatggcacagccgcgccactactgccgca 454 |||||||||||||||||||||| ||||||||| | | ||||||||| ||| |||| | Sbjct: 105026 acaccaagttctgctactacaataactacagcctctcgcagccgcgctacttctgcaaga 105085 Query: 455 catgccgccgctactggacgcacggtggcacgctgcgcaaggtccccgtcggtggcg 511 | ||||||||||||||||| | || ||| |||| || || ||||||||||| |||| Sbjct: 105086 cgtgccgccgctactggaccaagggcggctcgctccggaacgtccccgtcggcggcg 105142
>dbj|AP005844.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0060O16 Length = 164373 Score = 73.8 bits (37), Expect = 5e-10 Identities = 97/117 (82%) Strand = Plus / Minus Query: 395 acaccaagttctgctactacaacaactacagcatggcacagccgcgccactactgccgca 454 |||||||||||||||||||||| ||||||||| | | ||||||||| ||| |||| | Sbjct: 54950 acaccaagttctgctactacaataactacagcctctcgcagccgcgctacttctgcaaga 54891 Query: 455 catgccgccgctactggacgcacggtggcacgctgcgcaaggtccccgtcggtggcg 511 | ||||||||||||||||| | || ||| |||| || || ||||||||||| |||| Sbjct: 54890 cgtgccgccgctactggaccaagggcggctcgctccggaacgtccccgtcggcggcg 54834
>dbj|AP005323.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0680A05 Length = 168092 Score = 73.8 bits (37), Expect = 5e-10 Identities = 97/117 (82%) Strand = Plus / Minus Query: 395 acaccaagttctgctactacaacaactacagcatggcacagccgcgccactactgccgca 454 |||||||||||||||||||||| ||||||||| | | ||||||||| ||| |||| | Sbjct: 147573 acaccaagttctgctactacaataactacagcctctcgcagccgcgctacttctgcaaga 147514 Query: 455 catgccgccgctactggacgcacggtggcacgctgcgcaaggtccccgtcggtggcg 511 | ||||||||||||||||| | || ||| |||| || || ||||||||||| |||| Sbjct: 147513 cgtgccgccgctactggaccaagggcggctcgctccggaacgtccccgtcggcggcg 147457
>ref|XM_478332.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1080 Score = 71.9 bits (36), Expect = 2e-09 Identities = 102/124 (82%) Strand = Plus / Plus Query: 395 acaccaagttctgctactacaacaactacagcatggcacagccgcgccactactgccgca 454 ||||||||||||||||||||||||||||| || | |||||||| |||| |||| Sbjct: 173 acaccaagttctgctactacaacaactactcgctgtcgcagccgcggcacttctgcaagg 232 Query: 455 catgccgccgctactggacgcacggtggcacgctgcgcaaggtccccgtcggtggcgcgt 514 | ||| ||||||||||||| ||| ||||||||||| || ||||||||||| |||| || Sbjct: 233 cgtgcaagcgctactggacgcgcggcggcacgctgcggaacgtccccgtcggcggcgggt 292 Query: 515 gccg 518 |||| Sbjct: 293 gccg 296
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 71.9 bits (36), Expect = 2e-09 Identities = 102/124 (82%) Strand = Plus / Plus Query: 395 acaccaagttctgctactacaacaactacagcatggcacagccgcgccactactgccgca 454 ||||||||||||||||||||||||||||| || | |||||||| |||| |||| Sbjct: 19309198 acaccaagttctgctactacaacaactactcgctgtcgcagccgcggcacttctgcaagg 19309257 Query: 455 catgccgccgctactggacgcacggtggcacgctgcgcaaggtccccgtcggtggcgcgt 514 | ||| ||||||||||||| ||| ||||||||||| || ||||||||||| |||| || Sbjct: 19309258 cgtgcaagcgctactggacgcgcggcggcacgctgcggaacgtccccgtcggcggcgggt 19309317 Query: 515 gccg 518 |||| Sbjct: 19309318 gccg 19309321 Score = 58.0 bits (29), Expect = 3e-05 Identities = 95/117 (81%) Strand = Plus / Minus Query: 395 acaccaagttctgctactacaacaactacagcatggcacagccgcgccactactgccgca 454 |||||||||||||||||| |||||||||| | | | ||||| ||||||| |||| Sbjct: 7637539 acaccaagttctgctacttcaacaactactccctcacccagccccgccacttctgcaagg 7637480 Query: 455 catgccgccgctactggacgcacggtggcacgctgcgcaaggtccccgtcggtggcg 511 | ||||||||||||||||| | ||| ||| | || ||||| ||||||||||| |||| Sbjct: 7637479 cttgccgccgctactggacccgcggcggcgccctccgcaacgtccccgtcggcggcg 7637423 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Minus Query: 400 aagttctgctactacaacaactaca 424 ||||||||||||||||||||||||| Sbjct: 29025055 aagttctgctactacaacaactaca 29025031 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 191 gcgctgctccgcccgcacggc 211 ||||||||||||||||||||| Sbjct: 24096847 gcgctgctccgcccgcacggc 24096827 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 242 tccccgccgccgccgccaagc 262 ||||||||||||||||||||| Sbjct: 23771826 tccccgccgccgccgccaagc 23771806 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 ctcctccccgccgccgccgcc 258 ||||||||||||||||||||| Sbjct: 21760705 ctcctccccgccgccgccgcc 21760685 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 239 tcctccccgccgccgccgcc 258 |||||||||||||||||||| Sbjct: 26983460 tcctccccgccgccgccgcc 26983479 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 316 gcgcaggagagcgcggtgac 335 |||||||||||||||||||| Sbjct: 23669015 gcgcaggagagcgcggtgac 23669034 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 239 tcctccccgccgccgccgcc 258 |||||||||||||||||||| Sbjct: 23431638 tcctccccgccgccgccgcc 23431657 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 238 ctcctccccgccgccgccgccaagcgcc 265 |||||||||||||||| |||| |||||| Sbjct: 16681875 ctcctccccgccgccgacgcctagcgcc 16681848 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 236 cgctcctccccgccgccgccgcca 259 ||||||| |||||||||||||||| Sbjct: 15367370 cgctccttcccgccgccgccgcca 15367347 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 236 cgctcctccccgccgccgccgcca 259 ||||| |||||||||||||||||| Sbjct: 5339863 cgctcgtccccgccgccgccgcca 5339840 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 239 tcctccccgccgccgccgcc 258 |||||||||||||||||||| Sbjct: 2307114 tcctccccgccgccgccgcc 2307133
>dbj|AP003815.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1163_G04 Length = 106253 Score = 71.9 bits (36), Expect = 2e-09 Identities = 102/124 (82%) Strand = Plus / Plus Query: 395 acaccaagttctgctactacaacaactacagcatggcacagccgcgccactactgccgca 454 ||||||||||||||||||||||||||||| || | |||||||| |||| |||| Sbjct: 85424 acaccaagttctgctactacaacaactactcgctgtcgcagccgcggcacttctgcaagg 85483 Query: 455 catgccgccgctactggacgcacggtggcacgctgcgcaaggtccccgtcggtggcgcgt 514 | ||| ||||||||||||| ||| ||||||||||| || ||||||||||| |||| || Sbjct: 85484 cgtgcaagcgctactggacgcgcggcggcacgctgcggaacgtccccgtcggcggcgggt 85543 Query: 515 gccg 518 |||| Sbjct: 85544 gccg 85547
>gb|AY111630.1| Zea mays CL2150_1 mRNA sequence Length = 1313 Score = 69.9 bits (35), Expect = 8e-09 Identities = 50/55 (90%) Strand = Plus / Plus Query: 457 tgccgccgctactggacgcacggtggcacgctgcgcaaggtccccgtcggtggcg 511 ||||||||||||||||| | ||||||||||||||||| ||||||||||| |||| Sbjct: 315 tgccgccgctactggaccaagggtggcacgctgcgcaacgtccccgtcggcggcg 369
>ref|XM_483086.1| Oryza sativa (japonica cultivar-group), mRNA Length = 831 Score = 67.9 bits (34), Expect = 3e-08 Identities = 97/118 (82%) Strand = Plus / Plus Query: 394 gacaccaagttctgctactacaacaactacagcatggcacagccgcgccactactgccgc 453 |||||||| |||||||||||||||||||||| || | ||||| || |||| |||| Sbjct: 208 gacaccaaattctgctactacaacaactacaacacctcccagccccggcacttctgcaag 267 Query: 454 acatgccgccgctactggacgcacggtggcacgctgcgcaaggtccccgtcggtggcg 511 ||||||||||||||||| | ||||||||||| ||||| ||||||||||| |||| Sbjct: 268 tgttgccgccgctactggaccaagggtggcacgctccgcaacgtccccgtcggcggcg 325
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 67.9 bits (34), Expect = 3e-08 Identities = 97/118 (82%) Strand = Plus / Plus Query: 394 gacaccaagttctgctactacaacaactacagcatggcacagccgcgccactactgccgc 453 |||||||| |||||||||||||||||||||| || | ||||| || |||| |||| Sbjct: 24225799 gacaccaaattctgctactacaacaactacaacacctcccagccccggcacttctgcaag 24225858 Query: 454 acatgccgccgctactggacgcacggtggcacgctgcgcaaggtccccgtcggtggcg 511 ||||||||||||||||| | ||||||||||| ||||| ||||||||||| |||| Sbjct: 24225859 tgttgccgccgctactggaccaagggtggcacgctccgcaacgtccccgtcggcggcg 24225916 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 238 ctcctccccgccgccgccgccaa 260 ||||||||||||||||||||||| Sbjct: 9627564 ctcctccccgccgccgccgccaa 9627586 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 245 ccgccgccgccgccaagcgc 264 |||||||||||||||||||| Sbjct: 19376177 ccgccgccgccgccaagcgc 19376196
>dbj|AP004620.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0605H02 Length = 175547 Score = 67.9 bits (34), Expect = 3e-08 Identities = 97/118 (82%) Strand = Plus / Plus Query: 394 gacaccaagttctgctactacaacaactacagcatggcacagccgcgccactactgccgc 453 |||||||| |||||||||||||||||||||| || | ||||| || |||| |||| Sbjct: 92138 gacaccaaattctgctactacaacaactacaacacctcccagccccggcacttctgcaag 92197 Query: 454 acatgccgccgctactggacgcacggtggcacgctgcgcaaggtccccgtcggtggcg 511 ||||||||||||||||| | ||||||||||| ||||| ||||||||||| |||| Sbjct: 92198 tgttgccgccgctactggaccaagggtggcacgctccgcaacgtccccgtcggcggcg 92255
>ref|NM_197162.1| Oryza sativa (japonica cultivar-group) putative zinc finger protein (OSJNBa0066I08.3), mRNA Length = 2010 Score = 65.9 bits (33), Expect = 1e-07 Identities = 53/57 (92%), Gaps = 2/57 (3%) Strand = Plus / Plus Query: 371 agtgcccgcggtgcagctccagcga-caccaagttctgctactacaacaactacagc 426 |||||||||||||| |||| |||| ||||||||||||||||||||||||||||||| Sbjct: 1130 agtgcccgcggtgcggctcg-gcgaacaccaagttctgctactacaacaactacagc 1185 Score = 46.1 bits (23), Expect = 0.12 Identities = 47/55 (85%) Strand = Plus / Plus Query: 457 tgccgccgctactggacgcacggtggcacgctgcgcaaggtccccgtcggtggcg 511 ||||||||| |||||||| | || |||||||| ||| | ||||||||||| |||| Sbjct: 1216 tgccgccgccactggacggagggcggcacgctccgcgacgtccccgtcggcggcg 1270
>ref|NM_190742.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 963 Score = 65.9 bits (33), Expect = 1e-07 Identities = 96/117 (82%) Strand = Plus / Plus Query: 395 acaccaagttctgctactacaacaactacagcatggcacagccgcgccactactgccgca 454 |||||||||||||||||||||||||||||||| | ||||||||| ||| |||| Sbjct: 101 acaccaagttctgctactacaacaactacagcctcagccagccgcgctacttctgcaagg 160 Query: 455 catgccgccgctactggacgcacggtggcacgctgcgcaaggtccccgtcggtggcg 511 ||||||||| |||||||| | || ||| |||| ||||| ||||||||||| |||| Sbjct: 161 gatgccgccggtactggaccaagggcggctcgctccgcaacgtccccgtcggcggcg 217
>ref|NM_191305.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 618 Score = 65.9 bits (33), Expect = 1e-07 Identities = 93/113 (82%) Strand = Plus / Plus Query: 394 gacaccaagttctgctactacaacaactacagcatggcacagccgcgccactactgccgc 453 ||||||||||||||||||| ||||||||||| | | ||||||||||||| |||| Sbjct: 334 gacaccaagttctgctacttcaacaactacaacgtcaaccagccgcgccacttctgcaag 393 Query: 454 acatgccgccgctactggacgcacggtggcacgctgcgcaaggtccccgtcgg 506 | |||| ||||||||||||| ||| ||| |||| ||||| ||||||||||| Sbjct: 394 gcctgccaccgctactggacggccggcggcgcgctccgcaacgtccccgtcgg 446
>ref|XM_470300.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1809 Score = 65.9 bits (33), Expect = 1e-07 Identities = 51/57 (89%) Strand = Plus / Plus Query: 394 gacaccaagttctgctactacaacaactacagcatggcacagccgcgccactactgc 450 ||||||||||||||||||||||||||||||| ||| ||||||||||||| |||| Sbjct: 539 gacaccaagttctgctactacaacaactacaacatcaaccagccgcgccacttctgc 595
>gb|AC092489.4| Oryza sativa chromosome 10 BAC OSJNBa0066I08 genomic sequence, complete sequence Length = 25375 Score = 65.9 bits (33), Expect = 1e-07 Identities = 53/57 (92%), Gaps = 2/57 (3%) Strand = Plus / Minus Query: 371 agtgcccgcggtgcagctccagcga-caccaagttctgctactacaacaactacagc 426 |||||||||||||| |||| |||| ||||||||||||||||||||||||||||||| Sbjct: 8927 agtgcccgcggtgcggctcg-gcgaacaccaagttctgctactacaacaactacagc 8872 Score = 46.1 bits (23), Expect = 0.12 Identities = 47/55 (85%) Strand = Plus / Minus Query: 457 tgccgccgctactggacgcacggtggcacgctgcgcaaggtccccgtcggtggcg 511 ||||||||| |||||||| | || |||||||| ||| | ||||||||||| |||| Sbjct: 8841 tgccgccgccactggacggagggcggcacgctccgcgacgtccccgtcggcggcg 8787
>gb|AC073556.11| Oryza sativa chromosome 3 BAC OSJNBa0091P11 genomic sequence, complete sequence Length = 160738 Score = 65.9 bits (33), Expect = 1e-07 Identities = 51/57 (89%) Strand = Plus / Minus Query: 394 gacaccaagttctgctactacaacaactacagcatggcacagccgcgccactactgc 450 ||||||||||||||||||||||||||||||| ||| ||||||||||||| |||| Sbjct: 59359 gacaccaagttctgctactacaacaactacaacatcaaccagccgcgccacttctgc 59303
>gb|AC144491.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNAa0091P11, complete sequence Length = 132151 Score = 65.9 bits (33), Expect = 1e-07 Identities = 51/57 (89%) Strand = Plus / Plus Query: 394 gacaccaagttctgctactacaacaactacagcatggcacagccgcgccactactgc 450 ||||||||||||||||||||||||||||||| ||| ||||||||||||| |||| Sbjct: 642 gacaccaagttctgctactacaacaactacaacatcaaccagccgcgccacttctgc 698
>gb|AY224429.1| Oryza sativa (japonica cultivar-group) isolate 20575 putative H-protein promoter binding factor-2a mRNA, complete cds Length = 1323 Score = 65.9 bits (33), Expect = 1e-07 Identities = 51/57 (89%) Strand = Plus / Plus Query: 394 gacaccaagttctgctactacaacaactacagcatggcacagccgcgccactactgc 450 ||||||||||||||||||||||||||||||| ||| ||||||||||||| |||| Sbjct: 343 gacaccaagttctgctactacaacaactacaacatcaaccagccgcgccacttctgc 399
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 65.9 bits (33), Expect = 1e-07 Identities = 53/57 (92%), Gaps = 2/57 (3%) Strand = Plus / Minus Query: 371 agtgcccgcggtgcagctccagcga-caccaagttctgctactacaacaactacagc 426 |||||||||||||| |||| |||| ||||||||||||||||||||||||||||||| Sbjct: 18358336 agtgcccgcggtgcggctcg-gcgaacaccaagttctgctactacaacaactacagc 18358281 Score = 63.9 bits (32), Expect = 5e-07 Identities = 47/52 (90%) Strand = Plus / Minus Query: 373 tgcccgcggtgcagctccagcgacaccaagttctgctactacaacaactaca 424 ||||||||||||||| || ||||||||||||||||||| ||||||||||| Sbjct: 13368604 tgcccgcggtgcagcagcatggacaccaagttctgctacttcaacaactaca 13368553 Score = 46.1 bits (23), Expect = 0.12 Identities = 47/55 (85%) Strand = Plus / Minus Query: 457 tgccgccgctactggacgcacggtggcacgctgcgcaaggtccccgtcggtggcg 511 ||||||||| |||||||| | || |||||||| ||| | ||||||||||| |||| Sbjct: 18358250 tgccgccgccactggacggagggcggcacgctccgcgacgtccccgtcggcggcg 18358196 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 240 cctccccgccgccgccgccaag 261 |||||||||||||||||||||| Sbjct: 9983612 cctccccgccgccgccgccaag 9983633
>dbj|AP003409.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1131G08 Length = 158241 Score = 65.9 bits (33), Expect = 1e-07 Identities = 93/113 (82%) Strand = Plus / Minus Query: 394 gacaccaagttctgctactacaacaactacagcatggcacagccgcgccactactgccgc 453 ||||||||||||||||||| ||||||||||| | | ||||||||||||| |||| Sbjct: 30494 gacaccaagttctgctacttcaacaactacaacgtcaaccagccgcgccacttctgcaag 30435 Query: 454 acatgccgccgctactggacgcacggtggcacgctgcgcaaggtccccgtcgg 506 | |||| ||||||||||||| ||| ||| |||| ||||| ||||||||||| Sbjct: 30434 gcctgccaccgctactggacggccggcggcgcgctccgcaacgtccccgtcgg 30382
>dbj|AP003270.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0505D12 Length = 146951 Score = 65.9 bits (33), Expect = 1e-07 Identities = 96/117 (82%) Strand = Plus / Minus Query: 395 acaccaagttctgctactacaacaactacagcatggcacagccgcgccactactgccgca 454 |||||||||||||||||||||||||||||||| | ||||||||| ||| |||| Sbjct: 61064 acaccaagttctgctactacaacaactacagcctcagccagccgcgctacttctgcaagg 61005 Query: 455 catgccgccgctactggacgcacggtggcacgctgcgcaaggtccccgtcggtggcg 511 ||||||||| |||||||| | || ||| |||| ||||| ||||||||||| |||| Sbjct: 61004 gatgccgccggtactggaccaagggcggctcgctccgcaacgtccccgtcggcggcg 60948
>emb|AJ312330.1|HVU312330 Hordeum vulgare partial dof166 gene for dof zinc finger protein, exon 1 Length = 1817 Score = 65.9 bits (33), Expect = 1e-07 Identities = 51/57 (89%) Strand = Plus / Plus Query: 394 gacaccaagttctgctactacaacaactacagcatggcacagccgcgccactactgc 450 ||||||||||||||||||||||||||||||| ||| ||||||||||||| |||| Sbjct: 1057 gacaccaagttctgctactacaacaactacaacatcaaccagccgcgccacttctgc 1113
>dbj|AK109091.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-155-A04, full insert sequence Length = 1381 Score = 65.9 bits (33), Expect = 1e-07 Identities = 53/57 (92%), Gaps = 2/57 (3%) Strand = Plus / Plus Query: 371 agtgcccgcggtgcagctccagcga-caccaagttctgctactacaacaactacagc 426 |||||||||||||| |||| |||| ||||||||||||||||||||||||||||||| Sbjct: 619 agtgcccgcggtgcggctcg-gcgaacaccaagttctgctactacaacaactacagc 674 Score = 46.1 bits (23), Expect = 0.12 Identities = 47/55 (85%) Strand = Plus / Plus Query: 457 tgccgccgctactggacgcacggtggcacgctgcgcaaggtccccgtcggtggcg 511 ||||||||| |||||||| | || |||||||| ||| | ||||||||||| |||| Sbjct: 705 tgccgccgccactggacggagggcggcacgctccgcgacgtccccgtcggcggcg 759
>dbj|AK104523.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-F03, full insert sequence Length = 1776 Score = 65.9 bits (33), Expect = 1e-07 Identities = 51/57 (89%) Strand = Plus / Plus Query: 394 gacaccaagttctgctactacaacaactacagcatggcacagccgcgccactactgc 450 ||||||||||||||||||||||||||||||| ||| ||||||||||||| |||| Sbjct: 530 gacaccaagttctgctactacaacaactacaacatcaaccagccgcgccacttctgc 586
>dbj|AK099490.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013026L11, full insert sequence Length = 1800 Score = 65.9 bits (33), Expect = 1e-07 Identities = 51/57 (89%) Strand = Plus / Plus Query: 394 gacaccaagttctgctactacaacaactacagcatggcacagccgcgccactactgc 450 ||||||||||||||||||||||||||||||| ||| ||||||||||||| |||| Sbjct: 531 gacaccaagttctgctactacaacaactacaacatcaaccagccgcgccacttctgc 587
>dbj|AK071083.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023076F14, full insert sequence Length = 1078 Score = 65.9 bits (33), Expect = 1e-07 Identities = 93/113 (82%) Strand = Plus / Plus Query: 394 gacaccaagttctgctactacaacaactacagcatggcacagccgcgccactactgccgc 453 ||||||||||||||||||| ||||||||||| | | ||||||||||||| |||| Sbjct: 461 gacaccaagttctgctacttcaacaactacaacgtcaaccagccgcgccacttctgcaag 520 Query: 454 acatgccgccgctactggacgcacggtggcacgctgcgcaaggtccccgtcgg 506 | |||| ||||||||||||| ||| ||| |||| ||||| ||||||||||| Sbjct: 521 gcctgccaccgctactggacggccggcggcgcgctccgcaacgtccccgtcgg 573
>dbj|AK070563.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023060H13, full insert sequence Length = 1406 Score = 65.9 bits (33), Expect = 1e-07 Identities = 53/57 (92%), Gaps = 2/57 (3%) Strand = Plus / Plus Query: 371 agtgcccgcggtgcagctccagcga-caccaagttctgctactacaacaactacagc 426 |||||||||||||| |||| |||| ||||||||||||||||||||||||||||||| Sbjct: 620 agtgcccgcggtgcggctcg-gcgaacaccaagttctgctactacaacaactacagc 675 Score = 46.1 bits (23), Expect = 0.12 Identities = 47/55 (85%) Strand = Plus / Plus Query: 457 tgccgccgctactggacgcacggtggcacgctgcgcaaggtccccgtcggtggcg 511 ||||||||| |||||||| | || |||||||| ||| | ||||||||||| |||| Sbjct: 706 tgccgccgccactggacggagggcggcacgctccgcgacgtccccgtcggcggcg 760
>dbj|AK066912.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013089G12, full insert sequence Length = 1496 Score = 65.9 bits (33), Expect = 1e-07 Identities = 51/57 (89%) Strand = Plus / Minus Query: 394 gacaccaagttctgctactacaacaactacagcatggcacagccgcgccactactgc 450 ||||||||||||||||||||||||||||||| ||| ||||||||||||| |||| Sbjct: 996 gacaccaagttctgctactacaacaactacaacatcaaccagccgcgccacttctgc 940
>dbj|AK060900.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-D05, full insert sequence Length = 1776 Score = 65.9 bits (33), Expect = 1e-07 Identities = 51/57 (89%) Strand = Plus / Plus Query: 394 gacaccaagttctgctactacaacaactacagcatggcacagccgcgccactactgc 450 ||||||||||||||||||||||||||||||| ||| ||||||||||||| |||| Sbjct: 530 gacaccaagttctgctactacaacaactacaacatcaaccagccgcgccacttctgc 586
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 65.9 bits (33), Expect = 1e-07 Identities = 53/57 (92%), Gaps = 2/57 (3%) Strand = Plus / Minus Query: 371 agtgcccgcggtgcagctccagcga-caccaagttctgctactacaacaactacagc 426 |||||||||||||| |||| |||| ||||||||||||||||||||||||||||||| Sbjct: 18368389 agtgcccgcggtgcggctcg-gcgaacaccaagttctgctactacaacaactacagc 18368334 Score = 63.9 bits (32), Expect = 5e-07 Identities = 47/52 (90%) Strand = Plus / Minus Query: 373 tgcccgcggtgcagctccagcgacaccaagttctgctactacaacaactaca 424 ||||||||||||||| || ||||||||||||||||||| ||||||||||| Sbjct: 13375944 tgcccgcggtgcagcagcatggacaccaagttctgctacttcaacaactaca 13375893 Score = 46.1 bits (23), Expect = 0.12 Identities = 47/55 (85%) Strand = Plus / Minus Query: 457 tgccgccgctactggacgcacggtggcacgctgcgcaaggtccccgtcggtggcg 511 ||||||||| |||||||| | || |||||||| ||| | ||||||||||| |||| Sbjct: 18368303 tgccgccgccactggacggagggcggcacgctccgcgacgtccccgtcggcggcg 18368249 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 240 cctccccgccgccgccgccaag 261 |||||||||||||||||||||| Sbjct: 9989651 cctccccgccgccgccgccaag 9989672
>ref|NM_119961.2| Arabidopsis thaliana DNA binding / transcription factor AT4G38000 mRNA, complete cds Length = 963 Score = 63.9 bits (32), Expect = 5e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 395 acaccaagttctgctactacaacaactacagcatggcacagccgcgccactactgc 450 ||||||| |||||||||||||||||||||||| || | ||||| || ||||||||| Sbjct: 225 acaccaaattctgctactacaacaactacagcttgtctcagccacgtcactactgc 280
>ref|XM_507527.1| PREDICTED Oryza sativa (japonica cultivar-group), B1121A12.10 mRNA Length = 1328 Score = 63.9 bits (32), Expect = 5e-07 Identities = 68/80 (85%) Strand = Plus / Plus Query: 371 agtgcccgcggtgcagctccagcgacaccaagttctgctactacaacaactacagcatgg 430 |||||||||||||| || | | |||||||||||||||||||||||||||||| | | Sbjct: 335 agtgcccgcggtgcgagtcgaccaacaccaagttctgctactacaacaactacaacctct 394 Query: 431 cacagccgcgccactactgc 450 | ||||||||||||| |||| Sbjct: 395 cgcagccgcgccacttctgc 414
>ref|XM_467571.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1277 Score = 63.9 bits (32), Expect = 5e-07 Identities = 68/80 (85%) Strand = Plus / Plus Query: 371 agtgcccgcggtgcagctccagcgacaccaagttctgctactacaacaactacagcatgg 430 |||||||||||||| || | | |||||||||||||||||||||||||||||| | | Sbjct: 281 agtgcccgcggtgcgagtcgaccaacaccaagttctgctactacaacaactacaacctct 340 Query: 431 cacagccgcgccactactgc 450 | ||||||||||||| |||| Sbjct: 341 cgcagccgcgccacttctgc 360
>ref|XM_506950.2| PREDICTED Oryza sativa (japonica cultivar-group), B1121A12.10 mRNA Length = 1343 Score = 63.9 bits (32), Expect = 5e-07 Identities = 68/80 (85%) Strand = Plus / Plus Query: 371 agtgcccgcggtgcagctccagcgacaccaagttctgctactacaacaactacagcatgg 430 |||||||||||||| || | | |||||||||||||||||||||||||||||| | | Sbjct: 341 agtgcccgcggtgcgagtcgaccaacaccaagttctgctactacaacaactacaacctct 400 Query: 431 cacagccgcgccactactgc 450 | ||||||||||||| |||| Sbjct: 401 cgcagccgcgccacttctgc 420
>ref|NM_196421.1| Oryza sativa (japonica cultivar-group) putative H-protein promoter binding factor-2a (OSJNBa0060A14.11), mRNA Length = 1461 Score = 63.9 bits (32), Expect = 5e-07 Identities = 47/52 (90%) Strand = Plus / Plus Query: 373 tgcccgcggtgcagctccagcgacaccaagttctgctactacaacaactaca 424 ||||||||||||||| || ||||||||||||||||||| ||||||||||| Sbjct: 436 tgcccgcggtgcagcagcatggacaccaagttctgctacttcaacaactaca 487
>gb|AC147462.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1110B01, complete sequence Length = 160142 Score = 63.9 bits (32), Expect = 5e-07 Identities = 32/32 (100%) Strand = Plus / Plus Query: 395 acaccaagttctgctactacaacaactacagc 426 |||||||||||||||||||||||||||||||| Sbjct: 3630 acaccaagttctgctactacaacaactacagc 3661
>gb|AC133003.3| Oryza sativa chromosome 3 BAC OSJNBa0010D22 genomic sequence, complete sequence Length = 190055 Score = 63.9 bits (32), Expect = 5e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 395 acaccaagttctgctactacaacaactacagcatggcacagccgcgccactactgc 450 |||||||||||||||||||||||||||||||| | ||||||||||||| |||| Sbjct: 100631 acaccaagttctgctactacaacaactacagcctcagccagccgcgccacttctgc 100686
>emb|AL161592.2|ATCHRIV88 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 88 Length = 198493 Score = 63.9 bits (32), Expect = 5e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 395 acaccaagttctgctactacaacaactacagcatggcacagccgcgccactactgc 450 ||||||| |||||||||||||||||||||||| || | ||||| || ||||||||| Sbjct: 161017 acaccaaattctgctactacaacaactacagcttgtctcagccacgtcactactgc 161072
>emb|AL035538.1|ATF20D10 Arabidopsis thaliana DNA chromosome 4, BAC clone F20D10 (ESSA project) Length = 147215 Score = 63.9 bits (32), Expect = 5e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 395 acaccaagttctgctactacaacaactacagcatggcacagccgcgccactactgc 450 ||||||| |||||||||||||||||||||||| || | ||||| || ||||||||| Sbjct: 46602 acaccaaattctgctactacaacaactacagcttgtctcagccacgtcactactgc 46657
>gb|AC021893.18|AC021893 Genomic Sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0060A14, from chromosome 10, complete sequence Length = 151343 Score = 63.9 bits (32), Expect = 5e-07 Identities = 47/52 (90%) Strand = Plus / Minus Query: 373 tgcccgcggtgcagctccagcgacaccaagttctgctactacaacaactaca 424 ||||||||||||||| || ||||||||||||||||||| ||||||||||| Sbjct: 60981 tgcccgcggtgcagcagcatggacaccaagttctgctacttcaacaactaca 60930
>gb|BT006092.1| Arabidopsis thaliana clone U20996 putative Dof zinc finger protein (At4g38000) mRNA, complete cds Length = 772 Score = 63.9 bits (32), Expect = 5e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 395 acaccaagttctgctactacaacaactacagcatggcacagccgcgccactactgc 450 ||||||| |||||||||||||||||||||||| || | ||||| || ||||||||| Sbjct: 149 acaccaaattctgctactacaacaactacagcttgtctcagccacgtcactactgc 204
>gb|BT005767.1| Arabidopsis thaliana clone RAFL15-43-I22 (R20996) putative Dof zinc finger protein (At4g38000) mRNA, complete cds Length = 1006 Score = 63.9 bits (32), Expect = 5e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 395 acaccaagttctgctactacaacaactacagcatggcacagccgcgccactactgc 450 ||||||| |||||||||||||||||||||||| || | ||||| || ||||||||| Sbjct: 225 acaccaaattctgctactacaacaactacagcttgtctcagccacgtcactactgc 280
>dbj|AP005284.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1121A12 Length = 138796 Score = 63.9 bits (32), Expect = 5e-07 Identities = 68/80 (85%) Strand = Plus / Minus Query: 371 agtgcccgcggtgcagctccagcgacaccaagttctgctactacaacaactacagcatgg 430 |||||||||||||| || | | |||||||||||||||||||||||||||||| | | Sbjct: 27376 agtgcccgcggtgcgagtcgaccaacaccaagttctgctactacaacaactacaacctct 27317 Query: 431 cacagccgcgccactactgc 450 | ||||||||||||| |||| Sbjct: 27316 cgcagccgcgccacttctgc 27297
>dbj|AK100892.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023130J11, full insert sequence Length = 1328 Score = 63.9 bits (32), Expect = 5e-07 Identities = 68/80 (85%) Strand = Plus / Plus Query: 371 agtgcccgcggtgcagctccagcgacaccaagttctgctactacaacaactacagcatgg 430 |||||||||||||| || | | |||||||||||||||||||||||||||||| | | Sbjct: 335 agtgcccgcggtgcgagtcgaccaacaccaagttctgctactacaacaactacaacctct 394 Query: 431 cacagccgcgccactactgc 450 | ||||||||||||| |||| Sbjct: 395 cgcagccgcgccacttctgc 414
>dbj|AK101321.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033034E07, full insert sequence Length = 1343 Score = 63.9 bits (32), Expect = 5e-07 Identities = 68/80 (85%) Strand = Plus / Plus Query: 371 agtgcccgcggtgcagctccagcgacaccaagttctgctactacaacaactacagcatgg 430 |||||||||||||| || | | |||||||||||||||||||||||||||||| | | Sbjct: 341 agtgcccgcggtgcgagtcgaccaacaccaagttctgctactacaacaactacaacctct 400 Query: 431 cacagccgcgccactactgc 450 | ||||||||||||| |||| Sbjct: 401 cgcagccgcgccacttctgc 420
>dbj|AK068588.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013152P10, full insert sequence Length = 1381 Score = 63.9 bits (32), Expect = 5e-07 Identities = 47/52 (90%) Strand = Plus / Plus Query: 373 tgcccgcggtgcagctccagcgacaccaagttctgctactacaacaactaca 424 ||||||||||||||| || ||||||||||||||||||| ||||||||||| Sbjct: 450 tgcccgcggtgcagcagcatggacaccaagttctgctacttcaacaactaca 501
>dbj|AK061000.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-F09, full insert sequence Length = 1277 Score = 63.9 bits (32), Expect = 5e-07 Identities = 68/80 (85%) Strand = Plus / Plus Query: 371 agtgcccgcggtgcagctccagcgacaccaagttctgctactacaacaactacagcatgg 430 |||||||||||||| || | | |||||||||||||||||||||||||||||| | | Sbjct: 281 agtgcccgcggtgcgagtcgaccaacaccaagttctgctactacaacaactacaacctct 340 Query: 431 cacagccgcgccactactgc 450 | ||||||||||||| |||| Sbjct: 341 cgcagccgcgccacttctgc 360
>dbj|AB028132.1| Oryza sativa mRNA for Dof zinc finger protein, complete cds Length = 1331 Score = 63.9 bits (32), Expect = 5e-07 Identities = 68/80 (85%) Strand = Plus / Plus Query: 371 agtgcccgcggtgcagctccagcgacaccaagttctgctactacaacaactacagcatgg 430 |||||||||||||| || | | |||||||||||||||||||||||||||||| | | Sbjct: 324 agtgcccgcggtgcgagtcgaccaacaccaagttctgctactacaacaactacaacctct 383 Query: 431 cacagccgcgccactactgc 450 | ||||||||||||| |||| Sbjct: 384 cgcagccgcgccacttctgc 403
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 61.9 bits (31), Expect = 2e-06 Identities = 67/79 (84%) Strand = Plus / Plus Query: 395 acaccaagttctgctactacaacaactacagcatggcacagccgcgccactactgccgca 454 |||||||||||||||||||||||||||||| | | | ||||| ||||||| |||| Sbjct: 10112372 acaccaagttctgctactacaacaactacaacctctcccagccccgccacttctgcaagg 10112431 Query: 455 catgccgccgctactggac 473 | ||||||||||||||||| Sbjct: 10112432 cgtgccgccgctactggac 10112450 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 238 ctcctccccgccgccgccgcc 258 ||||||||||||||||||||| Sbjct: 3930374 ctcctccccgccgccgccgcc 3930394 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 240 cctccccgccgccgccgcca 259 |||||||||||||||||||| Sbjct: 24814738 cctccccgccgccgccgcca 24814757 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 236 cgctcctccccgccgccgccgcca 259 ||||||| |||||||||||||||| Sbjct: 8942224 cgctccttcccgccgccgccgcca 8942247 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 236 cgctcctccccgccgccgccgcca 259 ||||||| |||||||||||||||| Sbjct: 8942056 cgctccttcccgccgccgccgcca 8942079
>dbj|AP004791.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0491D10 Length = 162039 Score = 61.9 bits (31), Expect = 2e-06 Identities = 67/79 (84%) Strand = Plus / Plus Query: 395 acaccaagttctgctactacaacaactacagcatggcacagccgcgccactactgccgca 454 |||||||||||||||||||||||||||||| | | | ||||| ||||||| |||| Sbjct: 78738 acaccaagttctgctactacaacaactacaacctctcccagccccgccacttctgcaagg 78797 Query: 455 catgccgccgctactggac 473 | ||||||||||||||||| Sbjct: 78798 cgtgccgccgctactggac 78816
>ref|XM_477205.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1534 Score = 58.0 bits (29), Expect = 3e-05 Identities = 95/117 (81%) Strand = Plus / Plus Query: 395 acaccaagttctgctactacaacaactacagcatggcacagccgcgccactactgccgca 454 |||||||||||||||||| |||||||||| | | | ||||| ||||||| |||| Sbjct: 258 acaccaagttctgctacttcaacaactactccctcacccagccccgccacttctgcaagg 317 Query: 455 catgccgccgctactggacgcacggtggcacgctgcgcaaggtccccgtcggtggcg 511 | ||||||||||||||||| | ||| ||| | || ||||| ||||||||||| |||| Sbjct: 318 cttgccgccgctactggacccgcggcggcgccctccgcaacgtccccgtcggcggcg 374
>emb|AJ312329.1|HVU312329 Hordeum vulgare partial dof171 gene for dof zinc finger protein Length = 535 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 371 agtgcccgcggtgcagctccagcgacaccaagttctgctactacaacaactac 423 |||||||||| ||| ||||| | |||||||||||||||||| |||||||||| Sbjct: 114 agtgcccgcgctgcgactccaccaacaccaagttctgctacttcaacaactac 166
>emb|AJ312328.1|HVU312328 Hordeum vulgare partial dof151 gene for dof zinc finger protein Length = 657 Score = 58.0 bits (29), Expect = 3e-05 Identities = 68/81 (83%) Strand = Plus / Plus Query: 394 gacaccaagttctgctactacaacaactacagcatggcacagccgcgccactactgccgc 453 ||||||||||||||||||| ||||||||||| | | |||||||| |||| |||||| Sbjct: 241 gacaccaagttctgctacttcaacaactacaacgtcaaccagccgcggcacttctgccga 300 Query: 454 acatgccgccgctactggacg 474 | |||| ||||||||||||| Sbjct: 301 gcctgccaccgctactggacg 321
>dbj|AK068542.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013155H18, full insert sequence Length = 1534 Score = 58.0 bits (29), Expect = 3e-05 Identities = 95/117 (81%) Strand = Plus / Plus Query: 395 acaccaagttctgctactacaacaactacagcatggcacagccgcgccactactgccgca 454 |||||||||||||||||| |||||||||| | | | ||||| ||||||| |||| Sbjct: 258 acaccaagttctgctacttcaacaactactccctcacccagccccgccacttctgcaagg 317 Query: 455 catgccgccgctactggacgcacggtggcacgctgcgcaaggtccccgtcggtggcg 511 | ||||||||||||||||| | ||| ||| | || ||||| ||||||||||| |||| Sbjct: 318 cttgccgccgctactggacccgcggcggcgccctccgcaacgtccccgtcggcggcg 374
>dbj|AP004303.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0407H12 Length = 167754 Score = 58.0 bits (29), Expect = 3e-05 Identities = 95/117 (81%) Strand = Plus / Minus Query: 395 acaccaagttctgctactacaacaactacagcatggcacagccgcgccactactgccgca 454 |||||||||||||||||| |||||||||| | | | ||||| ||||||| |||| Sbjct: 142949 acaccaagttctgctacttcaacaactactccctcacccagccccgccacttctgcaagg 142890 Query: 455 catgccgccgctactggacgcacggtggcacgctgcgcaaggtccccgtcggtggcg 511 | ||||||||||||||||| | ||| ||| | || ||||| ||||||||||| |||| Sbjct: 142889 cttgccgccgctactggacccgcggcggcgccctccgcaacgtccccgtcggcggcg 142833
>ref|NM_105137.2| Arabidopsis thaliana DNA binding / transcription factor AT1G64620 mRNA, complete cds Length = 1589 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 395 acaccaagttctgctactacaacaactacagc 426 ||||||||||||| |||||||||||||||||| Sbjct: 469 acaccaagttctgttactacaacaactacagc 500
>ref|NM_129315.2| Arabidopsis thaliana DNA binding / transcription factor AT2G37590 mRNA, complete cds Length = 1263 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 395 acaccaagttctgctactacaacaactacagc 426 |||||||||||||||||| ||||||||||||| Sbjct: 441 acaccaagttctgctacttcaacaactacagc 472
>ref|NM_102596.3| Arabidopsis thaliana DNA binding / transcription factor AT1G28310 transcript variant AT1G28310.1 mRNA, complete cds Length = 1635 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 395 acaccaagttctgctactacaacaactacagc 426 |||| ||||||||||||||||||||||||||| Sbjct: 475 acacaaagttctgctactacaacaactacagc 506
>ref|NM_001036023.1| Arabidopsis thaliana DNA binding AT1G28310 transcript variant AT1G28310.2 mRNA, complete cds Length = 1627 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 395 acaccaagttctgctactacaacaactacagc 426 |||| ||||||||||||||||||||||||||| Sbjct: 162 acacaaagttctgctactacaacaactacagc 193
>gb|AF224765.1| Andira aubletii clone BwH11-I microsatellite sequence Length = 474 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 395 acaccaagttctgctactacaacaactacagc 426 |||||||||||||||||||||| ||||||||| Sbjct: 72 acaccaagttctgctactacaataactacagc 41
>gb|AC021044.5| Arabidopsis thaliana chromosome I BAC F3H9 genomic sequence, complete sequence Length = 121720 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 395 acaccaagttctgctactacaacaactacagc 426 |||| ||||||||||||||||||||||||||| Sbjct: 31705 acacaaagttctgctactacaacaactacagc 31736
>gb|AC004684.3| Arabidopsis thaliana chromosome 2 clone F13M22 map ve018, complete sequence Length = 93845 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 395 acaccaagttctgctactacaacaactacagc 426 |||||||||||||||||| ||||||||||||| Sbjct: 25863 acaccaagttctgctacttcaacaactacagc 25894
>emb|BX816643.1|CNS0AD27 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH5ZG11 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1637 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 395 acaccaagttctgctactacaacaactacagc 426 |||| ||||||||||||||||||||||||||| Sbjct: 477 acacaaagttctgctactacaacaactacagc 508
>emb|BX815139.1|CNS0ABDR Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS37ZE07 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1359 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 395 acaccaagttctgctactacaacaactacagc 426 ||||||||||||| |||||||||||||||||| Sbjct: 255 acaccaagttctgttactacaacaactacagc 286
>emb|BX820837.1|CNS0A8PT Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH74ZC06 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1314 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 395 acaccaagttctgctactacaacaactacagc 426 |||||||||||||||||| ||||||||||||| Sbjct: 442 acaccaagttctgctacttcaacaactacagc 473
>gb|BT005148.1| Arabidopsis thaliana clone U20433 putative Dof zinc finger protein (At1g64620) mRNA, complete cds Length = 1090 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 395 acaccaagttctgctactacaacaactacagc 426 ||||||||||||| |||||||||||||||||| Sbjct: 173 acaccaagttctgttactacaacaactacagc 204
>gb|AC009519.4|AC009519 Genomic sequence for Arabidopsis thaliana BAC F1N19 from chromosome I, complete sequence Length = 113172 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 395 acaccaagttctgctactacaacaactacagc 426 ||||||||||||| |||||||||||||||||| Sbjct: 75862 acaccaagttctgttactacaacaactacagc 75893
>gb|BT004047.1| Arabidopsis thaliana clone RAFL14-91-B14 (R20433) putative Dof zinc finger protein (At1g64620) mRNA, complete cds Length = 1611 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 395 acaccaagttctgctactacaacaactacagc 426 ||||||||||||| |||||||||||||||||| Sbjct: 475 acaccaagttctgttactacaacaactacagc 506
>gb|AY084898.1| Arabidopsis thaliana clone 120488 mRNA, complete sequence Length = 1359 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 395 acaccaagttctgctactacaacaactacagc 426 ||||||||||||| |||||||||||||||||| Sbjct: 237 acaccaagttctgttactacaacaactacagc 268
>gb|AY299272.1| Arabidopsis thaliana clone D2 mRNA sequence Length = 1642 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 395 acaccaagttctgctactacaacaactacagc 426 |||| ||||||||||||||||||||||||||| Sbjct: 162 acacaaagttctgctactacaacaactacagc 193
>ref|NM_114430.2| Arabidopsis thaliana DNA binding / transcription factor AT3G45610 mRNA, complete cds Length = 1072 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 395 acaccaagttctgctactacaacaactacag 425 |||| |||||||||||||||||||||||||| Sbjct: 239 acacaaagttctgctactacaacaactacag 269
>emb|AL138657.1|ATF9K21 Arabidopsis thaliana DNA chromosome 3, BAC clone F9K21 Length = 110980 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 395 acaccaagttctgctactacaacaactacag 425 |||| |||||||||||||||||||||||||| Sbjct: 82611 acacaaagttctgctactacaacaactacag 82581
>gb|AY062783.1| Arabidopsis thaliana dof6 zinc finger protein (F9K21.19) mRNA, complete cds Length = 972 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 395 acaccaagttctgctactacaacaactacag 425 |||| |||||||||||||||||||||||||| Sbjct: 239 acacaaagttctgctactacaacaactacag 269
>gb|AC169375.4| Sorghum bicolor clone SB_BBc0020O07, complete sequence Length = 117931 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 394 gacaccaagttctgctactacaacaactaca 424 |||||||||||||||||||| |||||||||| Sbjct: 100213 gacaccaagttctgctactataacaactaca 100183
>gb|BT006284.1| Arabidopsis thaliana At3g45610 mRNA, complete cds Length = 738 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 395 acaccaagttctgctactacaacaactacag 425 |||| |||||||||||||||||||||||||| Sbjct: 146 acacaaagttctgctactacaacaactacag 176
>emb|AJ243033.1|ATH243033 Arabidopsis thaliana mRNA for dof zinc finger protein (dof6 gene) Length = 1024 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 395 acaccaagttctgctactacaacaactacag 425 |||| |||||||||||||||||||||||||| Sbjct: 236 acacaaagttctgctactacaacaactacag 266
>dbj|AP006076.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT19M07, TM0114, complete sequence Length = 94533 Score = 54.0 bits (27), Expect = 5e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 395 acaccaagttctgctactacaacaactacagcatggcacagcc 437 |||| |||||||| |||||||||||||||||| || ||||||| Sbjct: 30671 acacaaagttctgttactacaacaactacagcttgacacagcc 30713
>dbj|AB028133.1| Oryza sativa mRNA for Dof zinc finger protein, complete cds Length = 1174 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 394 gacaccaagttctgctactacaacaactaca 424 ||||||||||||||||||| ||||||||||| Sbjct: 539 gacaccaagttctgctacttcaacaactaca 569
>ref|NM_126093.1| Arabidopsis thaliana DNA binding / transcription factor AT5G66940 mRNA, complete cds Length = 678 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 395 acaccaagttctgctactacaacaactaca 424 ||||||||||||| |||||||||||||||| Sbjct: 122 acaccaagttctgttactacaacaactaca 151
>ref|NM_103658.2| Arabidopsis thaliana DNA binding / transcription factor AT1G47655 mRNA, complete cds Length = 942 Score = 52.0 bits (26), Expect = 0.002 Identities = 92/114 (80%) Strand = Plus / Plus Query: 396 caccaagttctgctactacaacaactacagcatggcacagccgcgccactactgccgcac 455 |||||||||||| |||||||||||||| | | | || ||||| ||| |||||||| | Sbjct: 186 caccaagttctgttactacaacaactataacctcgctcagcctcgctactactgcaaatc 245 Query: 456 atgccgccgctactggacgcacggtggcacgctgcgcaaggtccccgtcggtgg 509 |||||||| |||||||| || ||||| || || || | |||||||||||||| Sbjct: 246 ttgccgccgttactggactcaaggtggtacactccgtgacgtccccgtcggtgg 299
>ref|XM_951865.1| Neurospora crassa OR74A hypothetical protein ( glucan 1,4-alpha-glucosidase related protein [imported] - Neurospora crassa OR74A ) (NCU01509.1) partial mRNA Length = 2253 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 413 acaacaactacagcatggcacagccg 438 |||||||||||||||||||||||||| Sbjct: 491 acaacaactacagcatggcacagccg 516
>ref|XM_327947.1| Neurospora crassa OR74A hypothetical protein ( glucan 1,4-alpha-glucosidase related protein [imported] - Neurospora crassa OR74A ) (NCU01509.1) partial mRNA Length = 2253 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 413 acaacaactacagcatggcacagccg 438 |||||||||||||||||||||||||| Sbjct: 491 acaacaactacagcatggcacagccg 516
>emb|AL355932.1|NCB5O22 Neurospora crassa DNA linkage group II BAC clone B5O22 Length = 58349 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 413 acaacaactacagcatggcacagccg 438 |||||||||||||||||||||||||| Sbjct: 31640 acaacaactacagcatggcacagccg 31615
>gb|AY088946.1| Arabidopsis thaliana clone 103581 mRNA, complete sequence Length = 936 Score = 52.0 bits (26), Expect = 0.002 Identities = 92/114 (80%) Strand = Plus / Plus Query: 396 caccaagttctgctactacaacaactacagcatggcacagccgcgccactactgccgcac 455 |||||||||||| |||||||||||||||| | | || ||||| || |||||||| | Sbjct: 180 caccaagttctgttactacaacaactacaacctcgctcagcctcgttactactgcaaatc 239 Query: 456 atgccgccgctactggacgcacggtggcacgctgcgcaaggtccccgtcggtgg 509 |||||||| |||||||| || ||||| || || || | |||||||||||||| Sbjct: 240 ttgccgccgttactggactcaaggtggtacactccgtgacgtccccgtcggtgg 293
>dbj|AB026640.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K8A10 Length = 31132 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 395 acaccaagttctgctactacaacaactaca 424 ||||||||||||| |||||||||||||||| Sbjct: 1173 acaccaagttctgttactacaacaactaca 1144
>dbj|AB087851.1| Pisum sativum PsDof6 mRNA for DNA binding with one finger 6 protein, complete cds Length = 871 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 395 acaccaagttctgctactacaacaactaca 424 |||| ||||||||||||||||||||||||| Sbjct: 152 acacaaagttctgctactacaacaactaca 181
>dbj|AB087850.1| Pisum sativum PsDof5 mRNA for DNA binding with one finger 5 protein, complete cds Length = 1023 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 395 acaccaagttctgctactacaacaactaca 424 |||||||||| ||||||||||||||||||| Sbjct: 252 acaccaagttttgctactacaacaactaca 281
>gb|AC007519.2|F16N3 Sequence of BAC F16N3 from Arabidopsis thaliana chromosome 1, complete sequence Length = 171769 Score = 52.0 bits (26), Expect = 0.002 Identities = 92/114 (80%) Strand = Plus / Minus Query: 396 caccaagttctgctactacaacaactacagcatggcacagccgcgccactactgccgcac 455 |||||||||||| |||||||||||||| | | | || ||||| ||| |||||||| | Sbjct: 40700 caccaagttctgttactacaacaactataacctcgctcagcctcgctactactgcaaatc 40641 Query: 456 atgccgccgctactggacgcacggtggcacgctgcgcaaggtccccgtcggtgg 509 |||||||| |||||||| || ||||| || || || | |||||||||||||| Sbjct: 40640 ttgccgccgttactggactcaaggtggtacactccgtgacgtccccgtcggtgg 40587
>ref|NM_191060.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1206 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 238 ctcctccccgccgccgccgccaagc 262 ||||||||||||||||||||||||| Sbjct: 106 ctcctccccgccgccgccgccaagc 130
>ref|XM_479581.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1803 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 400 aagttctgctactacaacaactaca 424 ||||||||||||||||||||||||| Sbjct: 416 aagttctgctactacaacaactaca 440
>ref|XM_506580.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBa0060O17.31 mRNA Length = 1849 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 400 aagttctgctactacaacaactaca 424 ||||||||||||||||||||||||| Sbjct: 425 aagttctgctactacaacaactaca 449
>dbj|AP003570.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0432B10 Length = 131918 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Minus Query: 238 ctcctccccgccgccgccgccaagc 262 ||||||||||||||||||||||||| Sbjct: 50405 ctcctccccgccgccgccgccaagc 50381
>gb|AY224430.1| Oryza sativa (japonica cultivar-group) isolate 20587 AOBP-like protein mRNA, complete cds Length = 1431 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 400 aagttctgctactacaacaactaca 424 ||||||||||||||||||||||||| Sbjct: 355 aagttctgctactacaacaactaca 379
>dbj|AP004331.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0085D07 Length = 172483 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Minus Query: 238 ctcctccccgccgccgccgccaagc 262 ||||||||||||||||||||||||| Sbjct: 5128 ctcctccccgccgccgccgccaagc 5104
>dbj|AP005167.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0060O17 Length = 180015 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Minus Query: 400 aagttctgctactacaacaactaca 424 ||||||||||||||||||||||||| Sbjct: 142592 aagttctgctactacaacaactaca 142568
>dbj|AP003247.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0425G02 Length = 155432 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Minus Query: 238 ctcctccccgccgccgccgccaagc 262 ||||||||||||||||||||||||| Sbjct: 128830 ctcctccccgccgccgccgccaagc 128806
>dbj|AK121582.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033037D14, full insert sequence Length = 1404 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 238 ctcctccccgccgccgccgccaagc 262 ||||||||||||||||||||||||| Sbjct: 85 ctcctccccgccgccgccgccaagc 109
>dbj|AK119625.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-117-H10, full insert sequence Length = 1767 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 400 aagttctgctactacaacaactaca 424 ||||||||||||||||||||||||| Sbjct: 424 aagttctgctactacaacaactaca 448
>dbj|AK104095.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-E07, full insert sequence Length = 1803 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 400 aagttctgctactacaacaactaca 424 ||||||||||||||||||||||||| Sbjct: 416 aagttctgctactacaacaactaca 440
>dbj|AK069786.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023030L13, full insert sequence Length = 1362 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 230 ccgcatcgctcctccccgccgccgc 254 ||||||||||||||||||||||||| Sbjct: 31 ccgcatcgctcctccccgccgccgc 55
>dbj|AK065816.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013041J16, full insert sequence Length = 1847 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 400 aagttctgctactacaacaactaca 424 ||||||||||||||||||||||||| Sbjct: 424 aagttctgctactacaacaactaca 448
>emb|AL731752.4|CNS08C81 Oryza sativa chromosome 12, . BAC OJ1536_D01 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 127026 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Minus Query: 230 ccgcatcgctcctccccgccgccgc 254 ||||||||||||||||||||||||| Sbjct: 33896 ccgcatcgctcctccccgccgccgc 33872
>emb|AL731751.4|CNS08C80 Oryza sativa chromosome 12, . BAC OJ1510_A06 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 136155 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 230 ccgcatcgctcctccccgccgccgc 254 ||||||||||||||||||||||||| Sbjct: 25415 ccgcatcgctcctccccgccgccgc 25439
>ref|NM_116321.3| Arabidopsis thaliana DNA binding AT4G00940 mRNA, complete cds Length = 915 Score = 48.1 bits (24), Expect = 0.031 Identities = 48/56 (85%) Strand = Plus / Plus Query: 382 tgcagctccagcgacaccaagttctgctactacaacaactacagcatggcacagcc 437 |||| ||| ||| |||||||||| || || ||||||||||||||| | |||||||| Sbjct: 247 tgcaactcaagcaacaccaagttttgttattacaacaactacagcttagcacagcc 302
>ref|NM_180607.1| Arabidopsis thaliana OBP2; DNA binding / transcription factor AT1G07640 (OBP2) transcript variant AT1G07640.1 mRNA, complete cds Length = 1418 Score = 48.1 bits (24), Expect = 0.031 Identities = 33/36 (91%) Strand = Plus / Plus Query: 387 ctccagcgacaccaagttctgctactacaacaacta 422 ||||||| |||| |||||||| |||||||||||||| Sbjct: 318 ctccagcaacactaagttctgttactacaacaacta 353
>ref|NM_100637.3| Arabidopsis thaliana OBP2; DNA binding / transcription factor AT1G07640 (OBP2) transcript variant AT1G07640.2 mRNA, complete cds Length = 1538 Score = 48.1 bits (24), Expect = 0.031 Identities = 33/36 (91%) Strand = Plus / Plus Query: 387 ctccagcgacaccaagttctgctactacaacaacta 422 ||||||| |||| |||||||| |||||||||||||| Sbjct: 438 ctccagcaacactaagttctgttactacaacaacta 473
>ref|NM_001035911.1| Arabidopsis thaliana OBP2; DNA binding AT1G07640 (OBP2) transcript variant AT1G07640.3 mRNA, complete cds Length = 1588 Score = 48.1 bits (24), Expect = 0.031 Identities = 33/36 (91%) Strand = Plus / Plus Query: 387 ctccagcgacaccaagttctgctactacaacaacta 422 ||||||| |||| |||||||| |||||||||||||| Sbjct: 488 ctccagcaacactaagttctgttactacaacaacta 523
>gb|AY389591.1| Hyacinthus orientalis H-protein promoter binding factor (DOF) mRNA, partial cds Length = 505 Score = 48.1 bits (24), Expect = 0.031 Identities = 27/28 (96%) Strand = Plus / Plus Query: 397 accaagttctgctactacaacaactaca 424 |||||||||||||||| ||||||||||| Sbjct: 56 accaagttctgctacttcaacaactaca 83
>gb|AC146855.5| Medicago truncatula clone mth2-16c23, complete sequence Length = 137979 Score = 48.1 bits (24), Expect = 0.031 Identities = 27/28 (96%) Strand = Plus / Minus Query: 395 acaccaagttctgctactacaacaacta 422 |||||||||||||||| ||||||||||| Sbjct: 118456 acaccaagttctgctattacaacaacta 118429
>emb|AL161491.2|ATCHRIV3 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 3 Length = 196149 Score = 48.1 bits (24), Expect = 0.031 Identities = 48/56 (85%) Strand = Plus / Minus Query: 382 tgcagctccagcgacaccaagttctgctactacaacaactacagcatggcacagcc 437 |||| ||| ||| |||||||||| || || ||||||||||||||| | |||||||| Sbjct: 17701 tgcaactcaagcaacaccaagttttgttattacaacaactacagcttagcacagcc 17646
>gb|AY093351.1| Arabidopsis thaliana strong similarity to zinc finger protein OBP2 (At1g07640) mRNA, complete cds Length = 922 Score = 48.1 bits (24), Expect = 0.031 Identities = 33/36 (91%) Strand = Plus / Plus Query: 387 ctccagcgacaccaagttctgctactacaacaacta 422 ||||||| |||| |||||||| |||||||||||||| Sbjct: 81 ctccagcaacactaagttctgttactacaacaacta 116
>gb|AY062715.1| Arabidopsis thaliana Strong similarity to zinc finger protein OBP2 (At1g07640; F24B9.30) mRNA, complete cds Length = 1399 Score = 48.1 bits (24), Expect = 0.031 Identities = 33/36 (91%) Strand = Plus / Plus Query: 387 ctccagcgacaccaagttctgctactacaacaacta 422 ||||||| |||| |||||||| |||||||||||||| Sbjct: 299 ctccagcaacactaagttctgttactacaacaacta 334
>emb|BX815039.1|CNS0ACXL Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS26ZH07 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1403 Score = 48.1 bits (24), Expect = 0.031 Identities = 33/36 (91%) Strand = Plus / Plus Query: 387 ctccagcgacaccaagttctgctactacaacaacta 422 ||||||| |||| |||||||| |||||||||||||| Sbjct: 399 ctccagcaacactaagttctgttactacaacaacta 434
>gb|AY088198.1| Arabidopsis thaliana clone 4289 mRNA, complete sequence Length = 1538 Score = 48.1 bits (24), Expect = 0.031 Identities = 33/36 (91%) Strand = Plus / Plus Query: 387 ctccagcgacaccaagttctgctactacaacaacta 422 ||||||| |||| |||||||| |||||||||||||| Sbjct: 438 ctccagcaacactaagttctgttactacaacaacta 473
>gb|AC007583.2|F24B9 Arabidopsis thaliana chromosome 1 BAC F24B9 sequence, complete sequence Length = 107234 Score = 48.1 bits (24), Expect = 0.031 Identities = 33/36 (91%) Strand = Plus / Plus Query: 387 ctccagcgacaccaagttctgctactacaacaacta 422 ||||||| |||| |||||||| |||||||||||||| Sbjct: 89778 ctccagcaacactaagttctgttactacaacaacta 89813
>gb|AF155816.1|AF155816 Arabidopsis thaliana zinc finger protein OBP2 mRNA, complete cds Length = 1408 Score = 48.1 bits (24), Expect = 0.031 Identities = 33/36 (91%) Strand = Plus / Plus Query: 387 ctccagcgacaccaagttctgctactacaacaacta 422 ||||||| |||| |||||||| |||||||||||||| Sbjct: 311 ctccagcaacactaagttctgttactacaacaacta 346
>gb|AY111543.1| Zea mays CL1878_1 mRNA sequence Length = 1200 Score = 48.1 bits (24), Expect = 0.031 Identities = 36/40 (90%) Strand = Plus / Plus Query: 395 acaccaagttctgctactacaacaactacagcatggcaca 434 |||||||||| |||||||||||||| || |||||| |||| Sbjct: 251 acaccaagttttgctactacaacaattatagcatgtcaca 290
>gb|U82230.1|ZMU82230 Zea mays endosperm-specific prolamin box binding factor (PBF) mRNA, complete cds Length = 1218 Score = 48.1 bits (24), Expect = 0.031 Identities = 36/40 (90%) Strand = Plus / Plus Query: 395 acaccaagttctgctactacaacaactacagcatggcaca 434 |||||||||| |||||||||||||| || |||||| |||| Sbjct: 251 acaccaagttttgctactacaacaattatagcatgtcaca 290
>gb|AF013294.1|TM018A10 Arabidopsis thaliana BAC TM018A10 Length = 106184 Score = 48.1 bits (24), Expect = 0.031 Identities = 48/56 (85%) Strand = Plus / Plus Query: 382 tgcagctccagcgacaccaagttctgctactacaacaactacagcatggcacagcc 437 |||| ||| ||| |||||||||| || || ||||||||||||||| | |||||||| Sbjct: 23889 tgcaactcaagcaacaccaagttttgttattacaacaactacagcttagcacagcc 23944
>ref|NM_102442.1| Arabidopsis thaliana DNA binding / transcription factor AT1G26790 mRNA, complete cds Length = 1191 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 394 gacaccaagttctgctactacaacaactaca 424 |||||||| ||||| |||||||||||||||| Sbjct: 430 gacaccaaattctgttactacaacaactaca 460
>ref|NM_125957.2| Arabidopsis thaliana DNA binding / transcription factor AT5G65590 mRNA, complete cds Length = 1391 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 395 acaccaagttctgctactacaacaactacag 425 |||| |||||||| ||||||||||||||||| Sbjct: 251 acacaaagttctgttactacaacaactacag 281
>gb|BT015717.1| Arabidopsis thaliana At4g35930 gene, complete cds Length = 951 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 395 acaccaagttctgctactacaacaactacag 425 |||| |||||||| ||||||||||||||||| Sbjct: 149 acacaaagttctgttactacaacaactacag 179
>gb|BT014981.1| Arabidopsis thaliana At5g65590 gene, complete cds Length = 1333 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 395 acaccaagttctgctactacaacaactacag 425 |||| |||||||| ||||||||||||||||| Sbjct: 228 acacaaagttctgttactacaacaactacag 258
>emb|BX830682.1|CNS0A0NG Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS13ZH09 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1394 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 395 acaccaagttctgctactacaacaactacag 425 |||| |||||||| ||||||||||||||||| Sbjct: 251 acacaaagttctgttactacaacaactacag 281
>gb|AC006535.7|AC006535 Genomic sequence for Arabidopsis thaliana BAC T24P13 from chromosome I, complete sequence Length = 98630 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Minus Query: 394 gacaccaagttctgctactacaacaactaca 424 |||||||| ||||| |||||||||||||||| Sbjct: 74376 gacaccaaattctgttactacaacaactaca 74346
>emb|AL713953.3|CNS07YPY Oryza sativa chromosome 12, . BAC OJ1134_A05 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 120825 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 245 ccgccgccgccgccaagcgcccc 267 ||||||||||||||||||||||| Sbjct: 76073 ccgccgccgccgccaagcgcccc 76051
>dbj|AB026639.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K21L13 Length = 63921 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Minus Query: 395 acaccaagttctgctactacaacaactacag 425 |||| |||||||| ||||||||||||||||| Sbjct: 29189 acacaaagttctgttactacaacaactacag 29159
>dbj|AP005123.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1015H11 Length = 156897 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 238 ctcctccccgccgccgccgccaa 260 ||||||||||||||||||||||| Sbjct: 25044 ctcctccccgccgccgccgccaa 25066
>dbj|AB087849.1| Pisum sativum PsDof4 mRNA for DNA binding with one finger 4 protein, complete cds Length = 1388 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 395 acaccaagttctgctactacaacaactacag 425 ||||||| ||||| ||||||||||||||||| Sbjct: 267 acaccaaattctgttactacaacaactacag 297
>dbj|AK107780.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-133-C06, full insert sequence Length = 545 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 245 ccgccgccgccgccaagcgcccc 267 ||||||||||||||||||||||| Sbjct: 65 ccgccgccgccgccaagcgcccc 87
>dbj|AK101810.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033066M17, full insert sequence Length = 1680 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 245 ccgccgccgccgccaagcgcccc 267 ||||||||||||||||||||||| Sbjct: 66 ccgccgccgccgccaagcgcccc 88
>emb|BX536967.2|CNS09SBH Oryza sativa chromosome 12, . BAC OSJNBa0029N15 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 141053 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 245 ccgccgccgccgccaagcgcccc 267 ||||||||||||||||||||||| Sbjct: 97610 ccgccgccgccgccaagcgcccc 97588
>ref|NM_114901.2| Arabidopsis thaliana OBP1; DNA binding / transcription factor AT3G50410 (OBP1) mRNA, complete cds Length = 996 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 395 acaccaagttctgctactacaacaactaca 424 |||| |||||||| |||||||||||||||| Sbjct: 240 acactaagttctgttactacaacaactaca 269
>ref|NM_123328.2| Arabidopsis thaliana DNA binding / transcription factor AT5G39660 transcript variant AT5G39660.2 mRNA, complete cds Length = 1692 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 397 accaagttctgctactacaacaacta 422 ||||||||||| |||||||||||||| Sbjct: 636 accaagttctgttactacaacaacta 661
>ref|NM_180775.2| Arabidopsis thaliana DNA binding / transcription factor AT5G39660 transcript variant AT5G39660.1 mRNA, complete cds Length = 1906 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 397 accaagttctgctactacaacaacta 422 ||||||||||| |||||||||||||| Sbjct: 663 accaagttctgttactacaacaacta 688
>ref|XM_550316.1| Oryza sativa (japonica cultivar-group), mRNA Length = 486 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 238 ctcctccccgccgccgccgcca 259 |||||||||||||||||||||| Sbjct: 44 ctcctccccgccgccgccgcca 23
>gb|BT015791.1| Arabidopsis thaliana At5g39660 mRNA, complete cds Length = 1374 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 397 accaagttctgctactacaacaacta 422 ||||||||||| |||||||||||||| Sbjct: 442 accaagttctgttactacaacaacta 467
>gb|AY225586.1| Brassica rapa subsp. oleifera HRa (HRa), HRb (HRb), and HRc (HRc) genes, complete cds Length = 18869 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 395 acaccaagttctgctactacaacaactaca 424 |||| |||||||| |||||||||||||||| Sbjct: 758 acactaagttctgttactacaacaactaca 787
>gb|AC136450.7| Medicago truncatula clone mth2-34d6, complete sequence Length = 86095 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 403 ttctgctactacaacaactaca 424 |||||||||||||||||||||| Sbjct: 33164 ttctgctactacaacaactaca 33143
>emb|AL731577.7| Human DNA sequence from clone RP11-298J20 on chromosome 10 Contains three novel genes, the 5' end of the ZRANB1 gene for zinc finger RAN-binding domain containing 1 and a CpG island, complete sequence Length = 91516 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 245 ccgccgccgccgccaagcgccc 266 |||||||||||||||||||||| Sbjct: 31296 ccgccgccgccgccaagcgccc 31317
>gb|AC091666.4| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBb0078C13, complete sequence Length = 140553 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 240 cctccccgccgccgccgccaag 261 |||||||||||||||||||||| Sbjct: 50343 cctccccgccgccgccgccaag 50322
>emb|AL132976.2|ATF11C1 Arabidopsis thaliana DNA chromosome 3, BAC clone F11C1 Length = 111122 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 395 acaccaagttctgctactacaacaactaca 424 |||| |||||||| |||||||||||||||| Sbjct: 110366 acactaagttctgttactacaacaactaca 110395
>emb|AJ248284.1|CNSPAX02 Pyrococcus abyssi complete genome; segment 2/6 Length = 293250 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 82 ctcactctctcctccctctcct 103 |||||||||||||||||||||| Sbjct: 65529 ctcactctctcctccctctcct 65508
>gb|AC113581.3| Tetraodon nigroviridis clone GSTNA-45F12, complete sequence Length = 115385 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 241 ctccccgccgccgccgccaagc 262 |||||||||||||||||||||| Sbjct: 9904 ctccccgccgccgccgccaagc 9883
>gb|AC113580.3| Tetraodon nigroviridis clone GSTNA-28E1, complete sequence Length = 127223 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 241 ctccccgccgccgccgccaagc 262 |||||||||||||||||||||| Sbjct: 101329 ctccccgccgccgccgccaagc 101308
>gb|AC123594.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0078C13, complete sequence Length = 146538 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 240 cctccccgccgccgccgccaag 261 |||||||||||||||||||||| Sbjct: 371 cctccccgccgccgccgccaag 392
>dbj|AP007159.1| Aspergillus oryzae RIB40 genomic DNA, SC026 Length = 2324132 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Minus Query: 219 ggctccagcttccgcatcgctcctcc 244 |||||||||||||| ||||||||||| Sbjct: 140526 ggctccagcttccgaatcgctcctcc 140501
>gb|AY072012.1| Arabidopsis thaliana AT5g39660/MIJ24_130 mRNA sequence Length = 1421 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 397 accaagttctgctactacaacaacta 422 ||||||||||| |||||||||||||| Sbjct: 597 accaagttctgttactacaacaacta 622
>dbj|AK158881.1| Mus musculus visual cortex cDNA, RIKEN full-length enriched library, clone:K430355O17 product:hypothetical protein, full insert sequence Length = 3725 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 244 cccgccgccgccgccaagcgcc 265 |||||||||||||||||||||| Sbjct: 22 cccgccgccgccgccaagcgcc 1
>ref|XM_930817.1| PREDICTED: Homo sapiens hypothetical protein LOC642434 (LOC642434), mRNA Length = 801 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 245 ccgccgccgccgccaagcgccc 266 |||||||||||||||||||||| Sbjct: 460 ccgccgccgccgccaagcgccc 439
>gb|AY056804.1| Arabidopsis thaliana AT5g39660/MIJ24_130 mRNA, complete cds Length = 1803 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 397 accaagttctgctactacaacaacta 422 ||||||||||| |||||||||||||| Sbjct: 636 accaagttctgttactacaacaacta 661
>emb|BX830102.1|CNS0A03T Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB5ZA10 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1750 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 397 accaagttctgctactacaacaacta 422 ||||||||||| |||||||||||||| Sbjct: 605 accaagttctgttactacaacaacta 630
>emb|BX830939.1|CNS09ZHX Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS40ZB11 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1803 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 397 accaagttctgctactacaacaacta 422 ||||||||||| |||||||||||||| Sbjct: 661 accaagttctgttactacaacaacta 686
>gb|AY214390.1| Lymantria dispar nucleopolyhedrovirus capsid-associated p24 protein gene, complete cds Length = 998 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 237 gctcctccccgccgccgccgcc 258 |||||||||||||||||||||| Sbjct: 378 gctcctccccgccgccgccgcc 357
>dbj|AP002523.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0013F10 Length = 163095 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 238 ctcctccccgccgccgccgcca 259 |||||||||||||||||||||| Sbjct: 84429 ctcctccccgccgccgccgcca 84450
>dbj|AP005833.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1328_D07 Length = 155007 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 237 gctcctccccgccgccgccgcc 258 |||||||||||||||||||||| Sbjct: 30791 gctcctccccgccgccgccgcc 30812
>dbj|AB012243.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MIJ24 Length = 68697 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 397 accaagttctgctactacaacaacta 422 ||||||||||| |||||||||||||| Sbjct: 51955 accaagttctgttactacaacaacta 51980
>emb|AJ242853.1|STU242853 Solanum tuberosum mRNA for Dof zinc finger protein (dof1 gene) Length = 1243 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 395 acaccaagttctgctactacaacaactaca 424 |||| ||||||||||||| ||||||||||| Sbjct: 302 acacaaagttctgctacttcaacaactaca 331
>emb|X89192.1|ATDNABPRO A.thaliana mRNA for DNA binding protein Length = 923 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 395 acaccaagttctgctactacaacaactaca 424 |||| |||||||| |||||||||||||||| Sbjct: 150 acactaagttctgttactacaacaactaca 179
>dbj|D31734.1|RATDLX3GP Rattus norvegicus mRNA for Dlx-3 hoemeobox protein, complete cds Length = 1388 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 238 ctcctccccgccgccgccgcca 259 |||||||||||||||||||||| Sbjct: 25 ctcctccccgccgccgccgcca 46
>ref|NM_012943.1| Rattus norvegicus distal-less homeobox 5 (Dlx5), mRNA Length = 1390 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 238 ctcctccccgccgccgccgcca 259 |||||||||||||||||||||| Sbjct: 28 ctcctccccgccgccgccgcca 49
>emb|AL713900.4|CNS07YQ0 Oryza sativa chromosome 12, . BAC OJ1126_F07 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 99791 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 237 gctcctccccgccgccgccgcc 258 |||||||||||||||||||||| Sbjct: 12941 gctcctccccgccgccgccgcc 12962
>gb|AC172878.1| Brassica rapa subsp. pekinensis clone KBrH069E01, complete sequence Length = 53923 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Minus Query: 397 accaagttctgctactacaacaacta 422 ||||||||||| |||||||||||||| Sbjct: 38409 accaagttctgttactacaacaacta 38384
>gb|L24443.1|RATRDLX Rat homeoprotein (rDlx) mRNA, complete cds Length = 1390 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 238 ctcctccccgccgccgccgcca 259 |||||||||||||||||||||| Sbjct: 28 ctcctccccgccgccgccgcca 49
>ref|NM_125637.2| Arabidopsis thaliana CDF1 (CYCLING DOF FACTOR 1); DNA binding / transcription factor AT5G62430 (CDF1) mRNA, complete cds Length = 1083 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 400 aagttctgctactacaacaactaca 424 |||||||| |||||||||||||||| Sbjct: 176 aagttctgttactacaacaactaca 200
>gb|AC115972.13| Mus musculus chromosome 5, clone RP24-79A6, complete sequence Length = 235928 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 83 tcactctctcctccctctcct 103 ||||||||||||||||||||| Sbjct: 209562 tcactctctcctccctctcct 209582
>ref|XM_550386.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1557 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 238 ctcctccccgccgccgccgcc 258 ||||||||||||||||||||| Sbjct: 165 ctcctccccgccgccgccgcc 185
>gb|AY423014.1| Danio rerio SRY-box 7 (SOX7) mRNA, complete cds Length = 2246 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 408 ctactacaacaactacagcat 428 ||||||||||||||||||||| Sbjct: 1327 ctactacaacaactacagcat 1347
>ref|NM_188100.1| Oryza sativa (japonica cultivar-group), Ozsa8532 predicted mRNA Length = 1365 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 400 aagttctgctactacaacaactaca 424 ||||||||||||| ||||||||||| Sbjct: 265 aagttctgctacttcaacaactaca 289
>ref|XM_463861.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1521 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 ctcctccccgccgccgccgcc 258 ||||||||||||||||||||| Sbjct: 29 ctcctccccgccgccgccgcc 9
>gb|AY953870.1| Oryza sativa (japonica cultivar-group) undeveloped tapetum 1 (UDT1) gene, udt1-1 allele, complete cds Length = 2051 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 ctcctccccgccgccgccgcc 258 ||||||||||||||||||||| Sbjct: 287 ctcctccccgccgccgccgcc 267
>ref|XM_478978.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2264 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 191 gcgctgctccgcccgcacggc 211 ||||||||||||||||||||| Sbjct: 1555 gcgctgctccgcccgcacggc 1575
>ref|NM_187019.1| Oryza sativa (japonica cultivar-group), mRNA Length = 642 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 242 tccccgccgccgccgccaagc 262 ||||||||||||||||||||| Sbjct: 158 tccccgccgccgccgccaagc 178
>ref|NM_185754.1| Oryza sativa (japonica cultivar-group), mRNA Length = 684 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 ctcctccccgccgccgccgcc 258 ||||||||||||||||||||| Sbjct: 51 ctcctccccgccgccgccgcc 31
>ref|NM_017218.2| Rattus norvegicus v-erb-b2 erythroblastic leukemia viral oncogene homolog 3 (avian) (Erbb3), mRNA Length = 4224 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 271 gccaccgactctgccttcgac 291 ||||||||||||||||||||| Sbjct: 4081 gccaccgactctgccttcgac 4101
>gb|BT018854.1| Zea mays clone EL01N0556B07.d mRNA sequence Length = 1562 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 191 gcgctgctccgcccgcacggc 211 ||||||||||||||||||||| Sbjct: 845 gcgctgctccgcccgcacggc 865
>ref|XM_583086.2| PREDICTED: Bos taurus similar to limkain b1 (LOC506615), mRNA Length = 4617 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 244 cccgccgccgccgccaagcgc 264 ||||||||||||||||||||| Sbjct: 264 cccgccgccgccgccaagcgc 244
>gb|AC096689.5| Oryza sativa chromosome 3 BAC OSJNBa0027J18 genomic sequence, complete sequence Length = 112892 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 ctcctccccgccgccgccgcc 258 ||||||||||||||||||||| Sbjct: 108608 ctcctccccgccgccgccgcc 108588
>gb|AC103550.13| Oryza sativa chromosome 3 BAC OSJNBa0079G12 genomic sequence, complete sequence Length = 163712 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 ctcctccccgccgccgccgcc 258 ||||||||||||||||||||| Sbjct: 30524 ctcctccccgccgccgccgcc 30504
>gb|BC075872.1| Danio rerio SRY (sex determining region Y)-box 7, mRNA (cDNA clone MGC:92054 IMAGE:7045912), complete cds Length = 2172 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 408 ctactacaacaactacagcat 428 ||||||||||||||||||||| Sbjct: 1511 ctactacaacaactacagcat 1531
>ref|NM_014647.2| Homo sapiens limkain b1 (LKAP), mRNA Length = 7745 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 244 cccgccgccgccgccaagcgc 264 ||||||||||||||||||||| Sbjct: 40 cccgccgccgccgccaagcgc 20
>gb|AC104847.2| Oryza sativa (japonica cultivar-group) chromosome 11 PAC clone P0480H08, complete sequence Length = 156301 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 238 ctcctccccgccgccgccgcc 258 ||||||||||||||||||||| Sbjct: 63249 ctcctccccgccgccgccgcc 63269
>ref|NM_010056.2| Mus musculus distal-less homeobox 5 (Dlx5), transcript variant 1, mRNA Length = 1431 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 238 ctcctccccgccgccgccgcc 258 ||||||||||||||||||||| Sbjct: 38 ctcctccccgccgccgccgcc 58
>ref|NM_198854.1| Mus musculus distal-less homeobox 5 (Dlx5), transcript variant 2, mRNA Length = 1349 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 238 ctcctccccgccgccgccgcc 258 ||||||||||||||||||||| Sbjct: 38 ctcctccccgccgccgccgcc 58
>ref|XM_986233.1| PREDICTED: Mus musculus RIKEN cDNA 4921513D23 gene, transcript variant 2 (4921513D23Rik), mRNA Length = 6398 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 244 cccgccgccgccgccaagcgc 264 ||||||||||||||||||||| Sbjct: 36 cccgccgccgccgccaagcgc 16 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,877,474 Number of Sequences: 3902068 Number of extensions: 4877474 Number of successful extensions: 263236 Number of sequences better than 10.0: 502 Number of HSP's better than 10.0 without gapping: 552 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 231662 Number of HSP's gapped (non-prelim): 31434 length of query: 557 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 534 effective length of database: 17,143,297,704 effective search space: 9154520973936 effective search space used: 9154520973936 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
