ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart43e10 |
|---|---|
| Clone Library Name | barley_pub |
>TESK1_HUMAN (Q15569) Dual specificity testis-specific protein kinase 1 (EC| 2.7.12.1) (Testicular protein kinase 1) Length = 626 Score = 28.1 bits (61), Expect = 6.9 Identities = 10/14 (71%), Positives = 10/14 (71%) Frame = +3 Query: 36 GSRPPLTNPAPGPG 77 G RPPL P PGPG Sbjct: 3 GERPPLRGPGPGPG 16
>SSDH_PONPY (Q6A2H2) Succinate semialdehyde dehydrogenase, mitochondrial| precursor (EC 1.2.1.24) (NAD(+)-dependent succinic semialdehyde dehydrogenase) Length = 535 Score = 28.1 bits (61), Expect = 6.9 Identities = 14/30 (46%), Positives = 15/30 (50%), Gaps = 2/30 (6%) Frame = +3 Query: 15 PPCRERP--GSRPPLTNPAPGPGSRAAMAG 98 P CR RP G P + PAPGP AG Sbjct: 20 PGCRLRPRAGGLVPASRPAPGPAQLRGYAG 49
>SSDH_PANTR (Q6A2H0) Succinate semialdehyde dehydrogenase, mitochondrial| precursor (EC 1.2.1.24) (NAD(+)-dependent succinic semialdehyde dehydrogenase) Length = 535 Score = 28.1 bits (61), Expect = 6.9 Identities = 14/30 (46%), Positives = 15/30 (50%), Gaps = 2/30 (6%) Frame = +3 Query: 15 PPCRERP--GSRPPLTNPAPGPGSRAAMAG 98 P CR RP G P + PAPGP AG Sbjct: 20 PGCRLRPRAGGLVPASGPAPGPAQLRCYAG 49
>SSDH_PANPA (Q3MSM4) Succinate semialdehyde dehydrogenase, mitochondrial| precursor (EC 1.2.1.24) (NAD(+)-dependent succinic semialdehyde dehydrogenase) Length = 535 Score = 28.1 bits (61), Expect = 6.9 Identities = 14/30 (46%), Positives = 15/30 (50%), Gaps = 2/30 (6%) Frame = +3 Query: 15 PPCRERP--GSRPPLTNPAPGPGSRAAMAG 98 P CR RP G P + PAPGP AG Sbjct: 20 PGCRLRPRAGGLVPASGPAPGPAQLRCYAG 49
>SSDH_HYLLA (Q3MSM3) Succinate semialdehyde dehydrogenase, mitochondrial| precursor (EC 1.2.1.24) (NAD(+)-dependent succinic semialdehyde dehydrogenase) Length = 535 Score = 28.1 bits (61), Expect = 6.9 Identities = 14/30 (46%), Positives = 15/30 (50%), Gaps = 2/30 (6%) Frame = +3 Query: 15 PPCRERP--GSRPPLTNPAPGPGSRAAMAG 98 P CR RP G P + PAPGP AG Sbjct: 20 PGCRLRPRAGGLVPASGPAPGPAQLRCYAG 49
>SSDH_HUMAN (P51649) Succinate semialdehyde dehydrogenase, mitochondrial| precursor (EC 1.2.1.24) (NAD(+)-dependent succinic semialdehyde dehydrogenase) Length = 535 Score = 28.1 bits (61), Expect = 6.9 Identities = 14/30 (46%), Positives = 15/30 (50%), Gaps = 2/30 (6%) Frame = +3 Query: 15 PPCRERP--GSRPPLTNPAPGPGSRAAMAG 98 P CR RP G P + PAPGP AG Sbjct: 20 PGCRLRPRAGGLVPASGPAPGPAQLRCYAG 49
>SSDH_GORGO (Q6A2H1) Succinate semialdehyde dehydrogenase, mitochondrial| precursor (EC 1.2.1.24) (NAD(+)-dependent succinic semialdehyde dehydrogenase) Length = 535 Score = 28.1 bits (61), Expect = 6.9 Identities = 14/30 (46%), Positives = 15/30 (50%), Gaps = 2/30 (6%) Frame = +3 Query: 15 PPCRERP--GSRPPLTNPAPGPGSRAAMAG 98 P CR RP G P + PAPGP AG Sbjct: 20 PGCRLRPRAGGLVPASGPAPGPAQLRCYAG 49
>LSD1_MOUSE (Q6ZQ88) Lysine-specific histone demethylase 1 (EC 1.-.-.-) (Amine| oxidase flavin-containing domain protein 2) (AOF2 protein) (BRAF35-HDAC complex protein BHC110) Length = 853 Score = 27.7 bits (60), Expect = 9.0 Identities = 15/36 (41%), Positives = 16/36 (44%), Gaps = 7/36 (19%) Frame = +3 Query: 6 KKQPP-------CRERPGSRPPLTNPAPGPGSRAAM 92 KK+PP E PGS P P GPGS M Sbjct: 63 KKEPPRASPPGGLAEPPGSAGPQAGPTAGPGSATPM 98
>ASPP1_MOUSE (Q62415) Apoptosis stimulating of p53 protein 1 (Protein| phosphatase 1 regulatory subunit 13B) Length = 1087 Score = 27.7 bits (60), Expect = 9.0 Identities = 12/22 (54%), Positives = 15/22 (68%) Frame = +3 Query: 15 PPCRERPGSRPPLTNPAPGPGS 80 PP R++P PP +N AP PGS Sbjct: 492 PPSRQKPAPLPPASN-APQPGS 512 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.304 0.128 0.374 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 9,281,507 Number of Sequences: 219361 Number of extensions: 105175 Number of successful extensions: 892 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 705 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 889 length of database: 80,573,946 effective HSP length: 28 effective length of database: 74,431,838 effective search space used: 1786364112 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 43 (21.8 bits)
