Clone Name | bart43e06 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | SRS1_ORYSA (P83649) Salt-stress root protein RS1 | 133 | 2e-31 | 2 | SEPN1_HUMAN (Q9NZV5) Selenoprotein N precursor | 29 | 8.6 | 3 | MOAA_ERWCT (Q6D3C7) Molybdenum cofactor biosynthesis protein A | 29 | 8.6 |
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>SRS1_ORYSA (P83649) Salt-stress root protein RS1| Length = 204 Score = 133 bits (335), Expect = 2e-31 Identities = 77/135 (57%), Positives = 83/135 (61%), Gaps = 1/135 (0%) Frame = +1 Query: 112 MTSVWKTKVLPGLSXXXXXXXXXXXXXEFLKSFNXXXXXXXXXXXXTELEPKVVETIEAS 291 MTSVWKTKVL GL+ EFLKSFN TELEPKVVE +E+S Sbjct: 1 MTSVWKTKVLTGLNKLFDKDGKKAAAAEFLKSFNKEEIGKEIDDKKTELEPKVVEVVESS 60 Query: 292 PPEXXXXXXXXXXXXXXX-NSAAVIKFLDEMAKIGFPGAKLVSDAVVKSGTTPLSPAIVF 468 PPE N AV KFL+E+AKI FPGAK VSDAV KSGTTPLSPAI F Sbjct: 61 PPEIKALLKDKKTASKIKKNGPAVTKFLEELAKIDFPGAKPVSDAVAKSGTTPLSPAIAF 120 Query: 469 ILDKVAPFVPAPKEE 513 IL+KVAPFV PKEE Sbjct: 121 ILEKVAPFV--PKEE 133
>SEPN1_HUMAN (Q9NZV5) Selenoprotein N precursor| Length = 590 Score = 28.9 bits (63), Expect = 8.6 Identities = 14/44 (31%), Positives = 24/44 (54%) Frame = +1 Query: 382 AKIGFPGAKLVSDAVVKSGTTPLSPAIVFILDKVAPFVPAPKEE 513 +K GF G ++ + +++ T SP+ VF PF+P P +E Sbjct: 173 SKDGFLGVSRLALSGLRNWTAAASPSAVFATRHFQPFLPPPGQE 216
>MOAA_ERWCT (Q6D3C7) Molybdenum cofactor biosynthesis protein A| Length = 329 Score = 28.9 bits (63), Expect = 8.6 Identities = 14/32 (43%), Positives = 18/32 (56%) Frame = +3 Query: 99 EGEEYDERMEDQGSPRAQQVLRQGWQEGRRRR 194 EG E R G QQ+L+QGWQ+ +R R Sbjct: 198 EGGELFRRHHVSGEVIRQQLLQQGWQQQQRAR 229 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 53,603,168 Number of Sequences: 219361 Number of extensions: 804320 Number of successful extensions: 2456 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 2426 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2455 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3812186532 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)